Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058950 | XP_013449058.1 | 95.272 | 423 | 13 | 1 | 1 | 416 | 1 | 423 | 0.0 | 830 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058950 | sp|Q9Y2M2|SSUH2_HUMAN | 28.882 | 322 | 210 | 7 | 86 | 406 | 68 | 371 | 9.30e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058950 | A0A072UB64 | 95.272 | 423 | 13 | 1 | 1 | 416 | 1 | 423 | 0.0 | 830 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0637590 | Msa1058950 | 0.821286 | 4.377595e-53 | -8.615850e-47 |
| Msa0644340 | Msa1058950 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0669350 | Msa1058950 | 0.807339 | 5.305013e-50 | -8.615850e-47 |
| Msa0227130 | Msa1058950 | -0.806394 | 8.402516e-50 | -8.615850e-47 |
| Msa1058950 | Msa1215740 | 0.809690 | 1.670650e-50 | -8.615850e-47 |
| Msa1058950 | Msa1289050 | 0.821854 | 3.235582e-53 | -8.615850e-47 |
| Msa1058950 | Msa1289090 | 0.827639 | 1.400021e-54 | -8.615850e-47 |
| Msa1058950 | Msa1332420 | 0.806613 | 7.555754e-50 | -8.615850e-47 |
| Msa0331870 | Msa1058950 | -0.809203 | 2.124548e-50 | -8.615850e-47 |
| Msa0345050 | Msa1058950 | 0.801327 | 9.487997e-49 | -8.615850e-47 |
| Msa0530730 | Msa1058950 | 0.800592 | 1.340915e-48 | -8.615850e-47 |
| Msa0534610 | Msa1058950 | 0.826295 | 2.934109e-54 | -8.615850e-47 |
| Msa0587560 | Msa1058950 | 0.810059 | 1.391227e-50 | -8.615850e-47 |
| Msa0590810 | Msa1058950 | 0.815922 | 7.210205e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058950 | MtrunA17_Chr7g0241151 | 95.272 | 423 | 13 | 1 | 1 | 416 | 1 | 423 | 0.0 | 830 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058950 | AT2G38000.1 | 62.529 | 427 | 141 | 6 | 1 | 416 | 1 | 419 | 0.0 | 559 |
Find 123 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGACCTGAACTTGGTATT+TGG | 0.143432 | 7_2:+44127951 | Msa1058950:CDS |
| ATTGAACTCCTTTGGATCTA+TGG | 0.205179 | 7_2:-44130309 | None:intergenic |
| TTGAGTTAACTTTGTCATTA+AGG | 0.219462 | 7_2:-44125818 | None:intergenic |
| TGGCAGGGAGGTTTACTTAA+AGG | 0.234593 | 7_2:+44130543 | Msa1058950:CDS |
| TAATTATACCTTCGGAATTC+AGG | 0.263563 | 7_2:-44127011 | None:intergenic |
| GATCTCCCTTTCTTGTATAA+AGG | 0.269358 | 7_2:-44127879 | None:intergenic |
| GTTGTTCGTCTGATTATTCA+TGG | 0.277671 | 7_2:+44130828 | Msa1058950:three_prime_UTR |
| ACGTTGGTCATCGTTGTTGC+TGG | 0.284024 | 7_2:+44127783 | Msa1058950:CDS |
| ATTGCATAATTGAACTCCTT+TGG | 0.315587 | 7_2:-44130317 | None:intergenic |
| GGTTACTATCCTCCTGTTCA+TGG | 0.315738 | 7_2:+44126160 | Msa1058950:CDS |
| ATACACCGTTGTCCATAATT+TGG | 0.318179 | 7_2:+44125855 | Msa1058950:five_prime_UTR |
| TGAACTTGGTATTTGGGAAT+TGG | 0.319345 | 7_2:+44127958 | Msa1058950:CDS |
| TAGAACAAAGAAGTGGAAAA+TGG | 0.328541 | 7_2:+44126038 | Msa1058950:intron |
| GCAATGTAGCCATTATAAAA+TGG | 0.334240 | 7_2:+44128592 | Msa1058950:CDS |
| GTTGCTTATCAAGGTGGATA+TGG | 0.336687 | 7_2:+44126966 | Msa1058950:CDS |
| GTATTTGGGAATTGGATCTA+AGG | 0.340045 | 7_2:+44127966 | Msa1058950:CDS |
| TTGGGGACTGTGTCCTTGTT+TGG | 0.342743 | 7_2:+44130588 | Msa1058950:CDS |
| GTATTATCCATTGTCTTGTA+AGG | 0.348793 | 7_2:+44130739 | Msa1058950:three_prime_UTR |
| AGGACCTGAACTTGGTATTT+GGG | 0.353750 | 7_2:+44127952 | Msa1058950:CDS |
| TTTAGACAGAGACCAAATTA+TGG | 0.355002 | 7_2:-44125867 | None:intergenic |
| GCTCCTGTTCCTTCTTCTGC+AGG | 0.365248 | 7_2:+44126139 | Msa1058950:CDS |
| AGTATTGATGGAAAGGATAA+AGG | 0.372987 | 7_2:+44127932 | Msa1058950:CDS |
| ACTCAGTGTCCTAGTTGTTA+TGG | 0.382433 | 7_2:+44128267 | Msa1058950:CDS |
| TCCTTCAGTTTCTATATTGT+AGG | 0.389220 | 7_2:+44130517 | Msa1058950:CDS |
| AGTTTCTATATTGTAGGAAA+TGG | 0.402725 | 7_2:+44130523 | Msa1058950:CDS |
| TGCTCGAACATGGAAGATTC+AGG | 0.411817 | 7_2:+44127817 | Msa1058950:CDS |
| ACATACAATCTCAGTTGTTC+CGG | 0.418682 | 7_2:+44130462 | Msa1058950:CDS |
| TGTCATTAAGGAATTAGAAA+TGG | 0.419088 | 7_2:-44125806 | None:intergenic |
| ATGGAACAACCTCTTCTATC+AGG | 0.419335 | 7_2:+44125895 | Msa1058950:CDS |
| TATGAGCATGTGGGTCGAAC+AGG | 0.420593 | 7_2:+44126067 | Msa1058950:CDS |
| TACGCTGGTGGAAGTATTGA+TGG | 0.422731 | 7_2:+44127920 | Msa1058950:CDS |
| CGTTGGTCATCGTTGTTGCT+GGG | 0.425280 | 7_2:+44127784 | Msa1058950:CDS |
| TCTTGTAAGGACTACAGTTA+TGG | 0.428415 | 7_2:+44130752 | Msa1058950:three_prime_UTR |
| GATCTATGGAAAACTTCATC+TGG | 0.432603 | 7_2:-44130295 | None:intergenic |
| TCAACACTTACACAAGTTCC+AGG | 0.435269 | 7_2:-44126100 | None:intergenic |
| TGGACATTATAAAGAAAATC+AGG | 0.436112 | 7_2:+44128242 | Msa1058950:CDS |
| GTTACTATCCTCCTGTTCAT+GGG | 0.438066 | 7_2:+44126161 | Msa1058950:CDS |
| CAGTCCCCAACAAAATTTAG+AGG | 0.439551 | 7_2:-44130575 | None:intergenic |
| TGCAATGCTGACGGAGAACC+TGG | 0.441027 | 7_2:+44128222 | Msa1058950:CDS |
| TAAAGTGGGACCAGTGCAAC+TGG | 0.445304 | 7_2:+44130781 | Msa1058950:three_prime_UTR |
| CTGTAGGGTACAAATAGAAA+AGG | 0.448232 | 7_2:-44127998 | None:intergenic |
| TGGATACCTTTATACAAGAA+AGG | 0.449032 | 7_2:+44127873 | Msa1058950:CDS |
| ATACCTTCGGAATTCAGGTC+TGG | 0.457154 | 7_2:-44127006 | None:intergenic |
| GAAGTTATTGAGAAATGCTC+AGG | 0.463765 | 7_2:+44128049 | Msa1058950:CDS |
| GTGTCCTAGTTGTTATGGAA+GGG | 0.475063 | 7_2:+44128272 | Msa1058950:CDS |
| CGAACAGGTTCTGCATATCC+TGG | 0.475291 | 7_2:+44126082 | Msa1058950:CDS |
| GGTTTGATTGCTCATAAAGA+TGG | 0.476633 | 7_2:+44128294 | Msa1058950:CDS |
| CTTAACTGTGAAACGTGTAA+TGG | 0.480057 | 7_2:+44128549 | Msa1058950:CDS |
| AAGCTTCCTTGTGCGACTTG+TGG | 0.485746 | 7_2:+44128513 | Msa1058950:CDS |
| TTCTCAATAACTTCAGAATG+AGG | 0.490617 | 7_2:-44128040 | None:intergenic |
| TGTCCTAGTTGTTATGGAAG+GGG | 0.490801 | 7_2:+44128273 | Msa1058950:CDS |
| TCTATATTGTAGGAAATGGC+AGG | 0.492186 | 7_2:+44130527 | Msa1058950:CDS |
| AAGAACATACCAGCAGGATC+AGG | 0.493662 | 7_2:-44126205 | None:intergenic |
| TAACCTGCAGAAGAAGGAAC+AGG | 0.501782 | 7_2:-44126142 | None:intergenic |
| ACAACGGTGTATTATATATG+TGG | 0.506544 | 7_2:-44125844 | None:intergenic |
| TAATGTATATGTTGGAACTC+TGG | 0.511144 | 7_2:+44127853 | Msa1058950:CDS |
| TCATCTGAGCCTGATCCTGC+TGG | 0.515267 | 7_2:+44126196 | Msa1058950:CDS |
| GGATAGTAACCTGCAGAAGA+AGG | 0.515742 | 7_2:-44126148 | None:intergenic |
| TAAGTATTCACCAGTTGCAC+TGG | 0.515841 | 7_2:-44130791 | None:intergenic |
| ATCCACTTATAGGGAAACCT+TGG | 0.516020 | 7_2:+44127727 | Msa1058950:intron |
| GGATACCTTTATACAAGAAA+GGG | 0.516430 | 7_2:+44127874 | Msa1058950:CDS |
| TAGAAGAGGTTGTTCCATGA+TGG | 0.519635 | 7_2:-44125890 | None:intergenic |
| AAGGATAAAGGACCTGAACT+TGG | 0.524416 | 7_2:+44127944 | Msa1058950:CDS |
| GTGTGAAATGTAATGGTAAA+GGG | 0.525645 | 7_2:+44128490 | Msa1058950:CDS |
| TGTGTGAAATGTAATGGTAA+AGG | 0.528269 | 7_2:+44128489 | Msa1058950:CDS |
| TTACTATCCTCCTGTTCATG+GGG | 0.529196 | 7_2:+44126162 | Msa1058950:CDS |
| ATTGATATGAGTATTGTAAA+CGG | 0.532254 | 7_2:-44125769 | None:intergenic |
| AGGAATTAGAAATGGTGCTA+AGG | 0.533731 | 7_2:-44125798 | None:intergenic |
| CAAATGACTCTTGCAGTGGC+AGG | 0.534071 | 7_2:-44130433 | None:intergenic |
| GATAAATTAGAACAAAGAAG+TGG | 0.536572 | 7_2:+44126031 | Msa1058950:intron |
| GAAGACTGTAATGTATATGT+TGG | 0.537409 | 7_2:+44127845 | Msa1058950:CDS |
| TGTAGGGTACAAATAGAAAA+GGG | 0.540231 | 7_2:-44127997 | None:intergenic |
| TCGTATCTCTACTTCATCCA+AGG | 0.540313 | 7_2:-44127744 | None:intergenic |
| GGATATGGAGGAAATTATGA+TGG | 0.542911 | 7_2:+44126981 | Msa1058950:CDS |
| GACTGTGTCCTTGTTTGGAG+TGG | 0.543949 | 7_2:+44130593 | Msa1058950:CDS |
| AAAAGGCAGGAGTGCATTGG+TGG | 0.545573 | 7_2:-44130348 | None:intergenic |
| GGTCTCTGTCTAAACCATCA+TGG | 0.546648 | 7_2:+44125876 | Msa1058950:exon |
| TGAATCTTCCATGTTCGAGC+AGG | 0.548957 | 7_2:-44127815 | None:intergenic |
| AGTGTCCTAGTTGTTATGGA+AGG | 0.551912 | 7_2:+44128271 | Msa1058950:CDS |
| AATTCCCAAATACCAAGTTC+AGG | 0.553284 | 7_2:-44127956 | None:intergenic |
| CAGTTATGGATGAAATAAAG+TGG | 0.555844 | 7_2:+44130766 | Msa1058950:three_prime_UTR |
| GTGCAAGCTGTTGCTTATCA+AGG | 0.556473 | 7_2:+44126957 | Msa1058950:intron |
| TGCAGATGTGTGAAATGTAA+TGG | 0.564143 | 7_2:+44128483 | Msa1058950:intron |
| GTTGGTCATCGTTGTTGCTG+GGG | 0.566395 | 7_2:+44127785 | Msa1058950:CDS |
| TCAATACTTCCACCAGCGTA+TGG | 0.566653 | 7_2:-44127917 | None:intergenic |
| CGGAAAGTAAGTGCAACTAA+AGG | 0.571263 | 7_2:+44130259 | Msa1058950:CDS |
| CAACGGTGTATTATATATGT+GGG | 0.572146 | 7_2:-44125843 | None:intergenic |
| TGGTGGAAGTATTGATGGAA+AGG | 0.573459 | 7_2:+44127925 | Msa1058950:CDS |
| TGTGCGACTTGTGGATCTCG+TGG | 0.577723 | 7_2:+44128522 | Msa1058950:CDS |
| ATGGAGCTCATATGAGCATG+TGG | 0.588921 | 7_2:+44126057 | Msa1058950:CDS |
| AAAATTGTACCTGATAGAAG+AGG | 0.593010 | 7_2:-44125904 | None:intergenic |
| AGTCCCCAACAAAATTTAGA+GGG | 0.594884 | 7_2:-44130574 | None:intergenic |
| TCCTACAATATAGAAACTGA+AGG | 0.594984 | 7_2:-44130518 | None:intergenic |
| CTGTAGTCCTTACAAGACAA+TGG | 0.599861 | 7_2:-44130746 | None:intergenic |
| ACTTTCAACCACTCCAAACA+AGG | 0.605949 | 7_2:-44130601 | None:intergenic |
| TGTGAAACGTGTAATGGAAG+TGG | 0.607659 | 7_2:+44128555 | Msa1058950:CDS |
| AGTTCAATTATGCAATACTC+AGG | 0.608227 | 7_2:+44130324 | Msa1058950:CDS |
| AAACCCCTTCCATAACAACT+AGG | 0.608898 | 7_2:-44128276 | None:intergenic |
| CTATATTGTAGGAAATGGCA+GGG | 0.610174 | 7_2:+44130528 | Msa1058950:CDS |
| TACTATCCTCCTGTTCATGG+GGG | 0.610681 | 7_2:+44126163 | Msa1058950:CDS |
| CGAGATCCACAAGTCGCACA+AGG | 0.611817 | 7_2:-44128519 | None:intergenic |
| GCTTATCAAGGTGGATATGG+AGG | 0.613991 | 7_2:+44126969 | Msa1058950:CDS |
| TCAGGTTGTGCTGGGCGAGG+AGG | 0.614657 | 7_2:+44128183 | Msa1058950:intron |
| CCGTGTCTGTATTAATAACG+TGG | 0.625174 | 7_2:+44125745 | None:intergenic |
| CTCACAAATGACTCTTGCAG+TGG | 0.628837 | 7_2:-44130437 | None:intergenic |
| GAGACAGAGCCATACGCTGG+TGG | 0.630889 | 7_2:+44127908 | Msa1058950:CDS |
| GACAATGGATAATACAACAA+AGG | 0.632017 | 7_2:-44130731 | None:intergenic |
| TCTTCCATGTTCGAGCAGGA+CGG | 0.635437 | 7_2:-44127811 | None:intergenic |
| AGTTATGGATGAAATAAAGT+GGG | 0.641592 | 7_2:+44130767 | Msa1058950:three_prime_UTR |
| AAAGAGACAGAGCCATACGC+TGG | 0.651645 | 7_2:+44127905 | Msa1058950:CDS |
| GAACCAGACCTGAATTCCGA+AGG | 0.656715 | 7_2:+44127003 | Msa1058950:CDS |
| CAAGCTGTTGCTTATCAAGG+TGG | 0.657221 | 7_2:+44126960 | Msa1058950:CDS |
| AAAGGCAGGAGTGCATTGGT+GGG | 0.657869 | 7_2:-44130347 | None:intergenic |
| AGTAAGTGCAACTAAAGGAG+CGG | 0.664827 | 7_2:+44130264 | Msa1058950:CDS |
| GGATTGCCGACGATGAGACA+TGG | 0.665410 | 7_2:-44130497 | None:intergenic |
| ACAGGAAGACACTTTCAACT+CGG | 0.667034 | 7_2:+44130239 | Msa1058950:intron |
| TGGAGCTCATATGAGCATGT+GGG | 0.669407 | 7_2:+44126058 | Msa1058950:CDS |
| GCGTCACCATGTCTCATCGT+CGG | 0.669689 | 7_2:+44130491 | Msa1058950:CDS |
| TGTGCTACATGCAATGCTGA+CGG | 0.677388 | 7_2:+44128213 | Msa1058950:CDS |
| GTCCCCAACAAAATTTAGAG+GGG | 0.691972 | 7_2:-44130573 | None:intergenic |
| GAGCTGCTCATTGATCACGT+TGG | 0.698946 | 7_2:+44127767 | Msa1058950:CDS |
| AGAGACCAAATTATGGACAA+CGG | 0.713809 | 7_2:-44125860 | None:intergenic |
| TATTGTAGGAAATGGCAGGG+AGG | 0.737284 | 7_2:+44130531 | Msa1058950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAGATTATTATTTTCA+AGG | + | chr7_2:44127590-44127609 | Msa1058950:intron | 10.0% |
| !!! | TTAAACATAAAAGTATTTTA+TGG | - | chr7_2:44128847-44128866 | None:intergenic | 10.0% |
| !!! | GTTATTTTTATATTTGTATT+TGG | + | chr7_2:44129324-44129343 | Msa1058950:intron | 10.0% |
| !! | AAATTATTCATACTATCATA+AGG | + | chr7_2:44126375-44126394 | Msa1058950:intron | 15.0% |
| !! | AATTCTAATCTAATTTGATT+GGG | - | chr7_2:44127366-44127385 | None:intergenic | 15.0% |
| !! | TAATTCTAATCTAATTTGAT+TGG | - | chr7_2:44127367-44127386 | None:intergenic | 15.0% |
| !! | ATTAGATTAGAATTAAGATT+AGG | + | chr7_2:44127372-44127391 | Msa1058950:intron | 15.0% |
| !! | ATTATATATTACCTACTATA+AGG | - | chr7_2:44127494-44127513 | None:intergenic | 15.0% |
| !! | ATATACATTCAAAATATCTT+TGG | + | chr7_2:44128876-44128895 | Msa1058950:intron | 15.0% |
| !! | AAAACAAATAGTATAAGTTT+CGG | - | chr7_2:44129108-44129127 | None:intergenic | 15.0% |
| !! | AATAAATTAAACAATACAAG+AGG | - | chr7_2:44129401-44129420 | None:intergenic | 15.0% |
| !!! | AATTTAGCTTCTAAAAAAAA+AGG | + | chr7_2:44129972-44129991 | Msa1058950:intron | 15.0% |
| !!! | ATTGATATGAGTATTGTAAA+CGG | - | chr7_2:44125772-44125791 | None:intergenic | 20.0% |
| !!! | TTTCATCATGATTTTAATTC+TGG | + | chr7_2:44125992-44126011 | Msa1058950:intron | 20.0% |
| !!! | TTCATCATGATTTTAATTCT+GGG | + | chr7_2:44125993-44126012 | Msa1058950:intron | 20.0% |
| !!! | ATCATAAGGAATTAGAATTT+TGG | + | chr7_2:44126389-44126408 | Msa1058950:intron | 20.0% |
| !! | CAATGATATAAACCATAATA+TGG | + | chr7_2:44127157-44127176 | Msa1058950:intron | 20.0% |
| !!! | CTACTTAATATTTGAAGTTT+TGG | + | chr7_2:44127431-44127450 | Msa1058950:intron | 20.0% |
| !!! | CAAGAACTTTTAATCATAAA+GGG | - | chr7_2:44127658-44127677 | None:intergenic | 20.0% |
| !!! | TCAAGAACTTTTAATCATAA+AGG | - | chr7_2:44127659-44127678 | None:intergenic | 20.0% |
| !! | TGATCAATAATCTTATCAAA+TGG | + | chr7_2:44127701-44127720 | Msa1058950:intron | 20.0% |
| !!! | TTTCACAAATTGAATTTTCA+CGG | + | chr7_2:44128097-44128116 | Msa1058950:intron | 20.0% |
| !!! | AATAATTTCCAAGGTTTTAA+GGG | - | chr7_2:44128162-44128181 | None:intergenic | 20.0% |
| !!! | AAATAATTTCCAAGGTTTTA+AGG | - | chr7_2:44128163-44128182 | None:intergenic | 20.0% |
| !!! | ACTAACATACCATTTTATAA+TGG | - | chr7_2:44128604-44128623 | None:intergenic | 20.0% |
| !!! | ATAAAAGTATTTTATGGATG+GGG | - | chr7_2:44128841-44128860 | None:intergenic | 20.0% |
| !!! | CATAAAAGTATTTTATGGAT+GGG | - | chr7_2:44128842-44128861 | None:intergenic | 20.0% |
| !!! | ACATAAAAGTATTTTATGGA+TGG | - | chr7_2:44128843-44128862 | None:intergenic | 20.0% |
| !!! | ATAGTTTAATTTAACTAAGC+AGG | + | chr7_2:44129006-44129025 | Msa1058950:intron | 20.0% |
| !!! | TAGTTTAATTTAACTAAGCA+GGG | + | chr7_2:44129007-44129026 | Msa1058950:intron | 20.0% |
| !!! | AACTATAATATGTAGTTTTC+CGG | + | chr7_2:44129065-44129084 | Msa1058950:intron | 20.0% |
| !! | TTTAAATAAAATATGGAGGT+CGG | - | chr7_2:44129178-44129197 | None:intergenic | 20.0% |
| !! | CCTATTTAAATAAAATATGG+AGG | - | chr7_2:44129182-44129201 | None:intergenic | 20.0% |
| !!! | CCTCCATATTTTATTTAAAT+AGG | + | chr7_2:44129179-44129198 | Msa1058950:intron | 20.0% |
| !! | ACGCCTATTTAAATAAAATA+TGG | - | chr7_2:44129185-44129204 | None:intergenic | 20.0% |
| !! | ACTTTGAACAATATATACAT+AGG | + | chr7_2:44129235-44129254 | Msa1058950:intron | 20.0% |
| !! | TATATACATAGGTATTAAGA+AGG | + | chr7_2:44129246-44129265 | Msa1058950:intron | 20.0% |
| !! | ATATACATAGGTATTAAGAA+GGG | + | chr7_2:44129247-44129266 | Msa1058950:intron | 20.0% |
| !!! | TTCTAAAAAAAAAGGAACAA+AGG | + | chr7_2:44129980-44129999 | Msa1058950:intron | 20.0% |
| !!! | AAGTCGATTTAAGAATAATA+TGG | - | chr7_2:44130169-44130188 | None:intergenic | 20.0% |
| !! | AAAAAAAGAATCAGCAAAAA+AGG | - | chr7_2:44130368-44130387 | None:intergenic | 20.0% |
| ! | TGTCATTAAGGAATTAGAAA+TGG | - | chr7_2:44125809-44125828 | None:intergenic | 25.0% |
| ! | TTGAGTTAACTTTGTCATTA+AGG | - | chr7_2:44125821-44125840 | None:intergenic | 25.0% |
| ! | GATAAATTAGAACAAAGAAG+TGG | + | chr7_2:44126031-44126050 | Msa1058950:intron | 25.0% |
| ! | ATAAACCAATATTGTTACCA+AGG | + | chr7_2:44126257-44126276 | Msa1058950:intron | 25.0% |
| !! | TAAAACCTTGGTAACAATAT+TGG | - | chr7_2:44126265-44126284 | None:intergenic | 25.0% |
| ! | GAACATAGGAGATAAATTTA+TGG | - | chr7_2:44126582-44126601 | None:intergenic | 25.0% |
| ! | CTATGTTCACTATGTTAAAA+CGG | + | chr7_2:44126594-44126613 | Msa1058950:intron | 25.0% |
| ! | TATGTTAAAACGGAGAAAAA+CGG | + | chr7_2:44126604-44126623 | Msa1058950:intron | 25.0% |
| ! | TACTGAATTTATGTTTGAGT+AGG | + | chr7_2:44126807-44126826 | Msa1058950:intron | 25.0% |
| ! | ACTGAATTTATGTTTGAGTA+GGG | + | chr7_2:44126808-44126827 | Msa1058950:intron | 25.0% |
| ! | CAGTTAAGTAATTATACCTT+CGG | - | chr7_2:44127022-44127041 | None:intergenic | 25.0% |
| ! | CCAAAATGAAATTAAGAACA+GGG | - | chr7_2:44127259-44127278 | None:intergenic | 25.0% |
| ! | ACCAAAATGAAATTAAGAAC+AGG | - | chr7_2:44127260-44127279 | None:intergenic | 25.0% |
| ! | CTAATTTCATGATCTATTAC+TGG | - | chr7_2:44127577-44127596 | None:intergenic | 25.0% |
| ! | ATTATTGATCAATATAGTGC+TGG | - | chr7_2:44127692-44127711 | None:intergenic | 25.0% |
| !!! | ATAATTTCCAAGGTTTTAAG+GGG | - | chr7_2:44128161-44128180 | None:intergenic | 25.0% |
| !! | AAACCTTGGAAATTATTTTC+AGG | + | chr7_2:44128165-44128184 | Msa1058950:intron | 25.0% |
| !! | TGATTTTCTTTATAATGTCC+AGG | - | chr7_2:44128243-44128262 | None:intergenic | 25.0% |
| ! | TGGACATTATAAAGAAAATC+AGG | + | chr7_2:44128242-44128261 | Msa1058950:CDS | 25.0% |
| ! | TTCATTTGCTCATAAATAGA+AGG | + | chr7_2:44128337-44128356 | Msa1058950:intron | 25.0% |
| ! | AAATTTATTTCAGAGTCCAT+TGG | - | chr7_2:44128683-44128702 | None:intergenic | 25.0% |
| ! | TTTGTCAAAAAGAAAGTTTG+AGG | - | chr7_2:44128709-44128728 | None:intergenic | 25.0% |
| ! | AACAACTACGTTAAATTTGT+GGG | - | chr7_2:44128736-44128755 | None:intergenic | 25.0% |
| ! | AAACAACTACGTTAAATTTG+TGG | - | chr7_2:44128737-44128756 | None:intergenic | 25.0% |
| ! | ATATGATGCATCCTTAATTA+TGG | + | chr7_2:44128945-44128964 | Msa1058950:intron | 25.0% |
| ! | ATAGCATTCAACCATAATTA+AGG | - | chr7_2:44128959-44128978 | None:intergenic | 25.0% |
| ! | GTGATAGAGCTAATAAATAA+AGG | - | chr7_2:44129156-44129175 | None:intergenic | 25.0% |
| ! | TGTATACATTCATCAAAACA+AGG | + | chr7_2:44129210-44129229 | Msa1058950:intron | 25.0% |
| ! | GTATACATTCATCAAAACAA+GGG | + | chr7_2:44129211-44129230 | Msa1058950:intron | 25.0% |
| ! | TGTTGACATATGTAGAAAAA+GGG | - | chr7_2:44129437-44129456 | None:intergenic | 25.0% |
| ! | TTGTTGACATATGTAGAAAA+AGG | - | chr7_2:44129438-44129457 | None:intergenic | 25.0% |
| !! | ACAGTGTTATATATGCTTTT+GGG | - | chr7_2:44129470-44129489 | None:intergenic | 25.0% |
| !! | AACAGTGTTATATATGCTTT+TGG | - | chr7_2:44129471-44129490 | None:intergenic | 25.0% |
| ! | TAAAAAGATGTGAGTGTTTA+AGG | + | chr7_2:44129562-44129581 | Msa1058950:intron | 25.0% |
| ! | CACAAGATAAGAAAAACTTT+AGG | + | chr7_2:44129598-44129617 | Msa1058950:intron | 25.0% |
| ! | TTGACATTATATAGAGTCAA+TGG | + | chr7_2:44129765-44129784 | Msa1058950:intron | 25.0% |
| ! | TAAGAATAATATGGTACTGT+AGG | - | chr7_2:44130160-44130179 | None:intergenic | 25.0% |
| ! | AGTTTCTATATTGTAGGAAA+TGG | + | chr7_2:44130523-44130542 | Msa1058950:CDS | 25.0% |
| !!! | AATAACAGAAGCATGTTTTT+TGG | + | chr7_2:44130688-44130707 | Msa1058950:three_prime_UTR | 25.0% |
| ! | AGTTATGGATGAAATAAAGT+GGG | + | chr7_2:44130767-44130786 | Msa1058950:three_prime_UTR | 25.0% |
| CAACGGTGTATTATATATGT+GGG | - | chr7_2:44125846-44125865 | None:intergenic | 30.0% | |
| ACAACGGTGTATTATATATG+TGG | - | chr7_2:44125847-44125866 | None:intergenic | 30.0% | |
| TTTAGACAGAGACCAAATTA+TGG | - | chr7_2:44125870-44125889 | None:intergenic | 30.0% | |
| AAAATTGTACCTGATAGAAG+AGG | - | chr7_2:44125907-44125926 | None:intergenic | 30.0% | |
| TAGAACAAAGAAGTGGAAAA+TGG | + | chr7_2:44126038-44126057 | Msa1058950:intron | 30.0% | |
| ! | CTTTTACTTAACTGTGTGTA+TGG | + | chr7_2:44126225-44126244 | Msa1058950:intron | 30.0% |
| !!! | GTTACCAAGGTTTTAAATAG+TGG | + | chr7_2:44126270-44126289 | Msa1058950:intron | 30.0% |
| TTAAAACCTGAATTGATCAG+TGG | - | chr7_2:44126519-44126538 | None:intergenic | 30.0% | |
| !! | CGTTTTAACATAGTGAACAT+AGG | - | chr7_2:44126596-44126615 | None:intergenic | 30.0% |
| ACAATCAAGGTTCTCAAAAA+CGG | - | chr7_2:44126681-44126700 | None:intergenic | 30.0% | |
| CACATATTGTGTAACAATCA+AGG | - | chr7_2:44126694-44126713 | None:intergenic | 30.0% | |
| CTTGATTGTTACACAATATG+TGG | + | chr7_2:44126692-44126711 | Msa1058950:intron | 30.0% | |
| CTGAATTTATGTTTGAGTAG+GGG | + | chr7_2:44126809-44126828 | Msa1058950:intron | 30.0% | |
| TGAATTTATGTTTGAGTAGG+GGG | + | chr7_2:44126810-44126829 | Msa1058950:intron | 30.0% | |
| ! | GCAACAGGTAATGTATTTTA+AGG | - | chr7_2:44126936-44126955 | None:intergenic | 30.0% |
| TAATTATACCTTCGGAATTC+AGG | - | chr7_2:44127014-44127033 | None:intergenic | 30.0% | |
| !! | TCTGAAAGAAGTATTAGTTG+TGG | + | chr7_2:44127124-44127143 | Msa1058950:intron | 30.0% |
| ! | CCCTGTTCTTAATTTCATTT+TGG | + | chr7_2:44127256-44127275 | Msa1058950:intron | 30.0% |
| !! | TTCATTTTGGTCATCCTTTA+TGG | + | chr7_2:44127269-44127288 | Msa1058950:intron | 30.0% |
| !! | TCATTTTGGTCATCCTTTAT+GGG | + | chr7_2:44127270-44127289 | Msa1058950:intron | 30.0% |
| GATAAACTTCTTATCATGTG+TGG | + | chr7_2:44127517-44127536 | Msa1058950:intron | 30.0% | |
| !! | ATTATTTTCAAGGCTTGTTC+TGG | + | chr7_2:44127600-44127619 | Msa1058950:intron | 30.0% |
| AAATGGCTAATCCACTTATA+GGG | + | chr7_2:44127718-44127737 | Msa1058950:intron | 30.0% | |
| GAAGACTGTAATGTATATGT+TGG | + | chr7_2:44127845-44127864 | Msa1058950:CDS | 30.0% | |
| TAATGTATATGTTGGAACTC+TGG | + | chr7_2:44127853-44127872 | Msa1058950:CDS | 30.0% | |
| TGGATACCTTTATACAAGAA+AGG | + | chr7_2:44127873-44127892 | Msa1058950:CDS | 30.0% | |
| GGATACCTTTATACAAGAAA+GGG | + | chr7_2:44127874-44127893 | Msa1058950:CDS | 30.0% | |
| !! | AGTATTGATGGAAAGGATAA+AGG | + | chr7_2:44127932-44127951 | Msa1058950:CDS | 30.0% |
| TGTAGGGTACAAATAGAAAA+GGG | - | chr7_2:44128000-44128019 | None:intergenic | 30.0% | |
| ! | TTTTCTATTTGTACCCTACA+GGG | + | chr7_2:44128000-44128019 | Msa1058950:CDS | 30.0% |
| TTCTCAATAACTTCAGAATG+AGG | - | chr7_2:44128043-44128062 | None:intergenic | 30.0% | |
| !!! | TAATTTCCAAGGTTTTAAGG+GGG | - | chr7_2:44128160-44128179 | None:intergenic | 30.0% |
| CAACCTGAAAATAATTTCCA+AGG | - | chr7_2:44128171-44128190 | None:intergenic | 30.0% | |
| !!! | AAATTATTTTCAGGTTGTGC+TGG | + | chr7_2:44128174-44128193 | Msa1058950:intron | 30.0% |
| !!! | AATTATTTTCAGGTTGTGCT+GGG | + | chr7_2:44128175-44128194 | Msa1058950:intron | 30.0% |
| TGTGTGAAATGTAATGGTAA+AGG | + | chr7_2:44128489-44128508 | Msa1058950:CDS | 30.0% | |
| GTGTGAAATGTAATGGTAAA+GGG | + | chr7_2:44128490-44128509 | Msa1058950:CDS | 30.0% | |
| GCAATGTAGCCATTATAAAA+TGG | + | chr7_2:44128592-44128611 | Msa1058950:CDS | 30.0% | |
| TTAAAAAACACATGCTCCAA+TGG | + | chr7_2:44128664-44128683 | Msa1058950:intron | 30.0% | |
| GAATGATCATATGCTTTAGT+TGG | + | chr7_2:44128793-44128812 | Msa1058950:intron | 30.0% | |
| GAGAATGATCTAAACCTAAT+GGG | - | chr7_2:44129363-44129382 | None:intergenic | 30.0% | |
| AGAGAATGATCTAAACCTAA+TGG | - | chr7_2:44129364-44129383 | None:intergenic | 30.0% | |
| AAAGCTGATGTTGATATCAA+AGG | + | chr7_2:44129507-44129526 | Msa1058950:intron | 30.0% | |
| ATAAAATGTGATGTATGTCG+TGG | + | chr7_2:44129536-44129555 | Msa1058950:intron | 30.0% | |
| ATCAAGAAAAGTTGCAATAG+AGG | + | chr7_2:44129693-44129712 | Msa1058950:intron | 30.0% | |
| AATATTCTGAATCTGCACAA+CGG | - | chr7_2:44130042-44130061 | None:intergenic | 30.0% | |
| ATTGCATAATTGAACTCCTT+TGG | - | chr7_2:44130320-44130339 | None:intergenic | 30.0% | |
| AGTTCAATTATGCAATACTC+AGG | + | chr7_2:44130324-44130343 | Msa1058950:CDS | 30.0% | |
| TCCTTCAGTTTCTATATTGT+AGG | + | chr7_2:44130517-44130536 | Msa1058950:CDS | 30.0% | |
| TCCTACAATATAGAAACTGA+AGG | - | chr7_2:44130521-44130540 | None:intergenic | 30.0% | |
| ! | ATTACCCCTCTAAATTTTGT+TGG | + | chr7_2:44130569-44130588 | Msa1058950:CDS | 30.0% |
| ! | TTACCCCTCTAAATTTTGTT+GGG | + | chr7_2:44130570-44130589 | Msa1058950:CDS | 30.0% |
| !!! | AAGCATGTTTTTTGGTTTGA+GGG | + | chr7_2:44130696-44130715 | Msa1058950:three_prime_UTR | 30.0% |
| GACAATGGATAATACAACAA+AGG | - | chr7_2:44130734-44130753 | None:intergenic | 30.0% | |
| GTATTATCCATTGTCTTGTA+AGG | + | chr7_2:44130739-44130758 | Msa1058950:three_prime_UTR | 30.0% | |
| CAGTTATGGATGAAATAAAG+TGG | + | chr7_2:44130766-44130785 | Msa1058950:three_prime_UTR | 30.0% | |
| ! | AGGAATTAGAAATGGTGCTA+AGG | - | chr7_2:44125801-44125820 | None:intergenic | 35.0% |
| ATACACCGTTGTCCATAATT+TGG | + | chr7_2:44125855-44125874 | Msa1058950:five_prime_UTR | 35.0% | |
| AGAGACCAAATTATGGACAA+CGG | - | chr7_2:44125863-44125882 | None:intergenic | 35.0% | |
| AAGTAAAAGAACATACCAGC+AGG | - | chr7_2:44126214-44126233 | None:intergenic | 35.0% | |
| ! | TCAGCCACTATTTAAAACCT+TGG | - | chr7_2:44126277-44126296 | None:intergenic | 35.0% |
| !!! | AAGGTTTTAAATAGTGGCTG+AGG | + | chr7_2:44126276-44126295 | Msa1058950:intron | 35.0% |
| GAATTGATCAGTGGTTACTT+TGG | - | chr7_2:44126510-44126529 | None:intergenic | 35.0% | |
| AAGTAACCACTGATCAATTC+AGG | + | chr7_2:44126510-44126529 | Msa1058950:intron | 35.0% | |
| TATTGTCAATCGCATATCGA+GGG | - | chr7_2:44126789-44126808 | None:intergenic | 35.0% | |
| GAATTTATGTTTGAGTAGGG+GGG | + | chr7_2:44126811-44126830 | Msa1058950:intron | 35.0% | |
| CCTCATACTTACAAAAGACA+TGG | - | chr7_2:44126858-44126877 | None:intergenic | 35.0% | |
| ! | CCATGTCTTTTGTAAGTATG+AGG | + | chr7_2:44126855-44126874 | Msa1058950:intron | 35.0% |
| GGATATGGAGGAAATTATGA+TGG | + | chr7_2:44126981-44127000 | Msa1058950:CDS | 35.0% | |
| AACTAACGTCTGCCATATTA+TGG | - | chr7_2:44127172-44127191 | None:intergenic | 35.0% | |
| TGAGCAGAAGATACTAATTG+AGG | + | chr7_2:44127327-44127346 | Msa1058950:intron | 35.0% | |
| AAGATACTAATTGAGGCAGA+AGG | + | chr7_2:44127334-44127353 | Msa1058950:intron | 35.0% | |
| CAAATGGCTAATCCACTTAT+AGG | + | chr7_2:44127717-44127736 | Msa1058950:intron | 35.0% | |
| GATCTCCCTTTCTTGTATAA+AGG | - | chr7_2:44127882-44127901 | None:intergenic | 35.0% | |
| AATTCCCAAATACCAAGTTC+AGG | - | chr7_2:44127959-44127978 | None:intergenic | 35.0% | |
| TGAACTTGGTATTTGGGAAT+TGG | + | chr7_2:44127958-44127977 | Msa1058950:CDS | 35.0% | |
| GTATTTGGGAATTGGATCTA+AGG | + | chr7_2:44127966-44127985 | Msa1058950:CDS | 35.0% | |
| CTGTAGGGTACAAATAGAAA+AGG | - | chr7_2:44128001-44128020 | None:intergenic | 35.0% | |
| ! | CTTTTCTATTTGTACCCTAC+AGG | + | chr7_2:44127999-44128018 | Msa1058950:CDS | 35.0% |
| GAAGTTATTGAGAAATGCTC+AGG | + | chr7_2:44128049-44128068 | Msa1058950:CDS | 35.0% | |
| AGAAATGCTCAGGTAAATTC+TGG | + | chr7_2:44128059-44128078 | Msa1058950:intron | 35.0% | |
| GGTTTGATTGCTCATAAAGA+TGG | + | chr7_2:44128294-44128313 | Msa1058950:CDS | 35.0% | |
| CATCTGCAAGAACATGTAAA+TGG | - | chr7_2:44128471-44128490 | None:intergenic | 35.0% | |
| TGCAGATGTGTGAAATGTAA+TGG | + | chr7_2:44128483-44128502 | Msa1058950:intron | 35.0% | |
| CTTAACTGTGAAACGTGTAA+TGG | + | chr7_2:44128549-44128568 | Msa1058950:CDS | 35.0% | |
| CAAATAGTATAAGTTTCGGC+AGG | - | chr7_2:44129104-44129123 | None:intergenic | 35.0% | |
| AAGGATACATCATACATGCA+AGG | - | chr7_2:44129137-44129156 | None:intergenic | 35.0% | |
| AGCCTTAAATTCTTCGTTGA+TGG | + | chr7_2:44129624-44129643 | Msa1058950:intron | 35.0% | |
| GCCTTAAATTCTTCGTTGAT+GGG | + | chr7_2:44129625-44129644 | Msa1058950:intron | 35.0% | |
| TCCCATCAACGAAGAATTTA+AGG | - | chr7_2:44129629-44129648 | None:intergenic | 35.0% | |
| TGCAATAGAGGTTGCTAATA+AGG | + | chr7_2:44129705-44129724 | Msa1058950:intron | 35.0% | |
| ! | GTTTGATGATACTTGTGATG+CGG | + | chr7_2:44129814-44129833 | Msa1058950:intron | 35.0% |
| CTCCAAATAGTTAGGAACAA+AGG | + | chr7_2:44129840-44129859 | Msa1058950:intron | 35.0% | |
| AGCCTTTGTTCCTAACTATT+TGG | - | chr7_2:44129845-44129864 | None:intergenic | 35.0% | |
| CTAAATTAGCCCACTCAAAT+TGG | - | chr7_2:44129959-44129978 | None:intergenic | 35.0% | |
| GATCTATGGAAAACTTCATC+TGG | - | chr7_2:44130298-44130317 | None:intergenic | 35.0% | |
| ! | GAAGTTTTCCATAGATCCAA+AGG | + | chr7_2:44130301-44130320 | Msa1058950:CDS | 35.0% |
| ATTGAACTCCTTTGGATCTA+TGG | - | chr7_2:44130312-44130331 | None:intergenic | 35.0% | |
| AAAGAATCAGCAAAAAAGGC+AGG | - | chr7_2:44130364-44130383 | None:intergenic | 35.0% | |
| ACATACAATCTCAGTTGTTC+CGG | + | chr7_2:44130462-44130481 | Msa1058950:CDS | 35.0% | |
| TCTATATTGTAGGAAATGGC+AGG | + | chr7_2:44130527-44130546 | Msa1058950:CDS | 35.0% | |
| CTATATTGTAGGAAATGGCA+GGG | + | chr7_2:44130528-44130547 | Msa1058950:CDS | 35.0% | |
| ! | TACCCCTCTAAATTTTGTTG+GGG | + | chr7_2:44130571-44130590 | Msa1058950:CDS | 35.0% |
| AGTCCCCAACAAAATTTAGA+GGG | - | chr7_2:44130577-44130596 | None:intergenic | 35.0% | |
| !!! | GAAGCATGTTTTTTGGTTTG+AGG | + | chr7_2:44130695-44130714 | Msa1058950:three_prime_UTR | 35.0% |
| !!! | AGCATGTTTTTTGGTTTGAG+GGG | + | chr7_2:44130697-44130716 | Msa1058950:three_prime_UTR | 35.0% |
| TCTTGTAAGGACTACAGTTA+TGG | + | chr7_2:44130752-44130771 | Msa1058950:three_prime_UTR | 35.0% | |
| GTTGTTCGTCTGATTATTCA+TGG | + | chr7_2:44130828-44130847 | Msa1058950:three_prime_UTR | 35.0% | |
| TAGAAGAGGTTGTTCCATGA+TGG | - | chr7_2:44125893-44125912 | None:intergenic | 40.0% | |
| ATGGAACAACCTCTTCTATC+AGG | + | chr7_2:44125895-44125914 | Msa1058950:CDS | 40.0% | |
| TCAACACTTACACAAGTTCC+AGG | - | chr7_2:44126103-44126122 | None:intergenic | 40.0% | |
| GTTACTATCCTCCTGTTCAT+GGG | + | chr7_2:44126161-44126180 | Msa1058950:CDS | 40.0% | |
| TTACTATCCTCCTGTTCATG+GGG | + | chr7_2:44126162-44126181 | Msa1058950:CDS | 40.0% | |
| CACAATCAGTAACGCAACAT+CGG | - | chr7_2:44126333-44126352 | None:intergenic | 40.0% | |
| AAAACGGAGAAAAACGGTAC+TGG | + | chr7_2:44126610-44126629 | Msa1058950:intron | 40.0% | |
| ! | CTACCTATACCTTTTTGTCG+TGG | + | chr7_2:44126636-44126655 | Msa1058950:intron | 40.0% |
| TGAAAACAGCCACGACAAAA+AGG | - | chr7_2:44126648-44126667 | None:intergenic | 40.0% | |
| !! | TTTTGTCGTGGCTGTTTTCA+TGG | + | chr7_2:44126648-44126667 | Msa1058950:intron | 40.0% |
| GCTATAGCATAGTAAACCTG+TGG | + | chr7_2:44126742-44126761 | Msa1058950:intron | 40.0% | |
| ! | GCAGTTTGTTCAAATTCCAC+AGG | - | chr7_2:44126761-44126780 | None:intergenic | 40.0% |
| GTATTGTCAATCGCATATCG+AGG | - | chr7_2:44126790-44126809 | None:intergenic | 40.0% | |
| GTTGCTTATCAAGGTGGATA+TGG | + | chr7_2:44126966-44126985 | Msa1058950:CDS | 40.0% | |
| !! | GTCACTGCTTTTACCCATAA+AGG | - | chr7_2:44127286-44127305 | None:intergenic | 40.0% |
| ATCCACTTATAGGGAAACCT+TGG | + | chr7_2:44127727-44127746 | Msa1058950:intron | 40.0% | |
| ATCCAAGGTTTCCCTATAAG+TGG | - | chr7_2:44127732-44127751 | None:intergenic | 40.0% | |
| TCGTATCTCTACTTCATCCA+AGG | - | chr7_2:44127747-44127766 | None:intergenic | 40.0% | |
| !! | TGGTGGAAGTATTGATGGAA+AGG | + | chr7_2:44127925-44127944 | Msa1058950:CDS | 40.0% |
| AAGGATAAAGGACCTGAACT+TGG | + | chr7_2:44127944-44127963 | Msa1058950:CDS | 40.0% | |
| AAGGACCTGAACTTGGTATT+TGG | + | chr7_2:44127951-44127970 | Msa1058950:CDS | 40.0% | |
| AGGACCTGAACTTGGTATTT+GGG | + | chr7_2:44127952-44127971 | Msa1058950:CDS | 40.0% | |
| ! | TTTTCATGCACTTCCCTGTA+GGG | - | chr7_2:44128016-44128035 | None:intergenic | 40.0% |
| ACTCAGTGTCCTAGTTGTTA+TGG | + | chr7_2:44128267-44128286 | Msa1058950:CDS | 40.0% | |
| AGTGTCCTAGTTGTTATGGA+AGG | + | chr7_2:44128271-44128290 | Msa1058950:CDS | 40.0% | |
| GTGTCCTAGTTGTTATGGAA+GGG | + | chr7_2:44128272-44128291 | Msa1058950:CDS | 40.0% | |
| TGTCCTAGTTGTTATGGAAG+GGG | + | chr7_2:44128273-44128292 | Msa1058950:CDS | 40.0% | |
| AAACCCCTTCCATAACAACT+AGG | - | chr7_2:44128279-44128298 | None:intergenic | 40.0% | |
| CAAATGTTGAATTCAAGCCG+AGG | + | chr7_2:44128382-44128401 | Msa1058950:intron | 40.0% | |
| !! | CTGCATTTCATTTCTGAAGC+TGG | + | chr7_2:44128418-44128437 | Msa1058950:intron | 40.0% |
| ! | TGTGAAACGTGTAATGGAAG+TGG | + | chr7_2:44128555-44128574 | Msa1058950:CDS | 40.0% |
| AATCTTGCTGCCAGACTTAA+AGG | - | chr7_2:44129033-44129052 | None:intergenic | 40.0% | |
| !! | ACCTAATGGGCTTGCTTAAT+GGG | - | chr7_2:44129350-44129369 | None:intergenic | 40.0% |
| !! | AACCTAATGGGCTTGCTTAA+TGG | - | chr7_2:44129351-44129370 | None:intergenic | 40.0% |
| ! | AAAGGCTTTTGTAACCCACT+TGG | + | chr7_2:44129858-44129877 | Msa1058950:intron | 40.0% |
| ! | AAGGCTTTTGTAACCCACTT+GGG | + | chr7_2:44129859-44129878 | Msa1058950:intron | 40.0% |
| ACAGGAAGACACTTTCAACT+CGG | + | chr7_2:44130239-44130258 | Msa1058950:intron | 40.0% | |
| CGGAAAGTAAGTGCAACTAA+AGG | + | chr7_2:44130259-44130278 | Msa1058950:CDS | 40.0% | |
| AGTAAGTGCAACTAAAGGAG+CGG | + | chr7_2:44130264-44130283 | Msa1058950:CDS | 40.0% | |
| GTCCCCAACAAAATTTAGAG+GGG | - | chr7_2:44130576-44130595 | None:intergenic | 40.0% | |
| CAGTCCCCAACAAAATTTAG+AGG | - | chr7_2:44130578-44130597 | None:intergenic | 40.0% | |
| ACTTTCAACCACTCCAAACA+AGG | - | chr7_2:44130604-44130623 | None:intergenic | 40.0% | |
| CTGTAGTCCTTACAAGACAA+TGG | - | chr7_2:44130749-44130768 | None:intergenic | 40.0% | |
| TAAGTATTCACCAGTTGCAC+TGG | - | chr7_2:44130794-44130813 | None:intergenic | 40.0% | |
| GGTCTCTGTCTAAACCATCA+TGG | + | chr7_2:44125876-44125895 | Msa1058950:exon | 45.0% | |
| ATGGAGCTCATATGAGCATG+TGG | + | chr7_2:44126057-44126076 | Msa1058950:CDS | 45.0% | |
| TGGAGCTCATATGAGCATGT+GGG | + | chr7_2:44126058-44126077 | Msa1058950:CDS | 45.0% | |
| TAACCTGCAGAAGAAGGAAC+AGG | - | chr7_2:44126145-44126164 | None:intergenic | 45.0% | |
| GGATAGTAACCTGCAGAAGA+AGG | - | chr7_2:44126151-44126170 | None:intergenic | 45.0% | |
| GGTTACTATCCTCCTGTTCA+TGG | + | chr7_2:44126160-44126179 | Msa1058950:CDS | 45.0% | |
| TACTATCCTCCTGTTCATGG+GGG | + | chr7_2:44126163-44126182 | Msa1058950:CDS | 45.0% | |
| AAGAACATACCAGCAGGATC+AGG | - | chr7_2:44126208-44126227 | None:intergenic | 45.0% | |
| ! | CGATGTTGCGTTACTGATTG+TGG | + | chr7_2:44126331-44126350 | Msa1058950:intron | 45.0% |
| ! | CAGCCACGACAAAAAGGTAT+AGG | - | chr7_2:44126642-44126661 | None:intergenic | 45.0% |
| ! | GTGCAAGCTGTTGCTTATCA+AGG | + | chr7_2:44126957-44126976 | Msa1058950:intron | 45.0% |
| ! | CAAGCTGTTGCTTATCAAGG+TGG | + | chr7_2:44126960-44126979 | Msa1058950:CDS | 45.0% |
| GCTTATCAAGGTGGATATGG+AGG | + | chr7_2:44126969-44126988 | Msa1058950:CDS | 45.0% | |
| ATACCTTCGGAATTCAGGTC+TGG | - | chr7_2:44127009-44127028 | None:intergenic | 45.0% | |
| GCTACTCTTCGCCTTATAGT+AGG | + | chr7_2:44127480-44127499 | Msa1058950:intron | 45.0% | |
| TGAATCTTCCATGTTCGAGC+AGG | - | chr7_2:44127818-44127837 | None:intergenic | 45.0% | |
| TGCTCGAACATGGAAGATTC+AGG | + | chr7_2:44127817-44127836 | Msa1058950:CDS | 45.0% | |
| TCAATACTTCCACCAGCGTA+TGG | - | chr7_2:44127920-44127939 | None:intergenic | 45.0% | |
| !! | TACGCTGGTGGAAGTATTGA+TGG | + | chr7_2:44127920-44127939 | Msa1058950:CDS | 45.0% |
| ! | CTTTTCATGCACTTCCCTGT+AGG | - | chr7_2:44128017-44128036 | None:intergenic | 45.0% |
| TTACCTCCCCCTTAAAACCT+TGG | + | chr7_2:44128151-44128170 | Msa1058950:intron | 45.0% | |
| !!! | TTTCCAAGGTTTTAAGGGGG+AGG | - | chr7_2:44128157-44128176 | None:intergenic | 45.0% |
| TGTGCTACATGCAATGCTGA+CGG | + | chr7_2:44128213-44128232 | Msa1058950:CDS | 45.0% | |
| GGCAGGAAAGTAATGAAAGC+CGG | - | chr7_2:44129087-44129106 | None:intergenic | 45.0% | |
| GATGGGATAGTTGTCTGACA+TGG | + | chr7_2:44129642-44129661 | Msa1058950:intron | 45.0% | |
| TGCGGTGACTCCAAATAGTT+AGG | + | chr7_2:44129832-44129851 | Msa1058950:intron | 45.0% | |
| ! | CTTTTGTAACCCACTTGGGT+TGG | + | chr7_2:44129863-44129882 | Msa1058950:intron | 45.0% |
| GTGGTATTGTCTTGGGACTT+GGG | + | chr7_2:44129890-44129909 | Msa1058950:intron | 45.0% | |
| GAATCAAACCTGAGACCTTG+AGG | - | chr7_2:44129927-44129946 | None:intergenic | 45.0% | |
| ! | ATGTGTGTGTGTGTGTTGAC+AGG | + | chr7_2:44130221-44130240 | Msa1058950:intron | 45.0% |
| ! | CAAAAAAGGCAGGAGTGCAT+TGG | - | chr7_2:44130354-44130373 | None:intergenic | 45.0% |
| CTCACAAATGACTCTTGCAG+TGG | - | chr7_2:44130440-44130459 | None:intergenic | 45.0% | |
| TATTGTAGGAAATGGCAGGG+AGG | + | chr7_2:44130531-44130550 | Msa1058950:CDS | 45.0% | |
| TGGCAGGGAGGTTTACTTAA+AGG | + | chr7_2:44130543-44130562 | Msa1058950:CDS | 45.0% | |
| TATGAGCATGTGGGTCGAAC+AGG | + | chr7_2:44126067-44126086 | Msa1058950:CDS | 50.0% | |
| CGAACAGGTTCTGCATATCC+TGG | + | chr7_2:44126082-44126101 | Msa1058950:CDS | 50.0% | |
| GAACCAGACCTGAATTCCGA+AGG | + | chr7_2:44127003-44127022 | Msa1058950:CDS | 50.0% | |
| GAGCTGCTCATTGATCACGT+TGG | + | chr7_2:44127767-44127786 | Msa1058950:CDS | 50.0% | |
| ACGTTGGTCATCGTTGTTGC+TGG | + | chr7_2:44127783-44127802 | Msa1058950:CDS | 50.0% | |
| CGTTGGTCATCGTTGTTGCT+GGG | + | chr7_2:44127784-44127803 | Msa1058950:CDS | 50.0% | |
| GTTGGTCATCGTTGTTGCTG+GGG | + | chr7_2:44127785-44127804 | Msa1058950:CDS | 50.0% | |
| TCTTCCATGTTCGAGCAGGA+CGG | - | chr7_2:44127814-44127833 | None:intergenic | 50.0% | |
| AAAGAGACAGAGCCATACGC+TGG | + | chr7_2:44127905-44127924 | Msa1058950:CDS | 50.0% | |
| CAAGCCGAGGTCAAATGTCT+AGG | + | chr7_2:44128395-44128414 | Msa1058950:intron | 50.0% | |
| GCAGCCTAGACATTTGACCT+CGG | - | chr7_2:44128402-44128421 | None:intergenic | 50.0% | |
| AAGCTTCCTTGTGCGACTTG+TGG | + | chr7_2:44128513-44128532 | Msa1058950:CDS | 50.0% | |
| CTAAGCAGGGCCTTTAAGTC+TGG | + | chr7_2:44129020-44129039 | Msa1058950:intron | 50.0% | |
| GCCCATTAAGCAAGCCCATT+AGG | + | chr7_2:44129346-44129365 | Msa1058950:intron | 50.0% | |
| TTGGCCTGGTGGTATTGTCT+TGG | + | chr7_2:44129882-44129901 | Msa1058950:intron | 50.0% | |
| TGGCCTGGTGGTATTGTCTT+GGG | + | chr7_2:44129883-44129902 | Msa1058950:intron | 50.0% | |
| AGTCCCAAGACAATACCACC+AGG | - | chr7_2:44129889-44129908 | None:intergenic | 50.0% | |
| GGTGGTATTGTCTTGGGACT+TGG | + | chr7_2:44129889-44129908 | Msa1058950:intron | 50.0% | |
| TCAAACCTGAGACCTTGAGG+AGG | - | chr7_2:44129924-44129943 | None:intergenic | 50.0% | |
| GTCTCAGGTTTGATTCTCCC+CGG | + | chr7_2:44129931-44129950 | Msa1058950:intron | 50.0% | |
| TAGCCCACTCAAATTGGCAC+CGG | - | chr7_2:44129953-44129972 | None:intergenic | 50.0% | |
| ! | AAAGGCAGGAGTGCATTGGT+GGG | - | chr7_2:44130350-44130369 | None:intergenic | 50.0% |
| ! | AAAAGGCAGGAGTGCATTGG+TGG | - | chr7_2:44130351-44130370 | None:intergenic | 50.0% |
| CAAATGACTCTTGCAGTGGC+AGG | - | chr7_2:44130436-44130455 | None:intergenic | 50.0% | |
| TTGGGGACTGTGTCCTTGTT+TGG | + | chr7_2:44130588-44130607 | Msa1058950:CDS | 50.0% | |
| ! | GACTGTGTCCTTGTTTGGAG+TGG | + | chr7_2:44130593-44130612 | Msa1058950:CDS | 50.0% |
| TAAAGTGGGACCAGTGCAAC+TGG | + | chr7_2:44130781-44130800 | Msa1058950:three_prime_UTR | 50.0% | |
| GCTCCTGTTCCTTCTTCTGC+AGG | + | chr7_2:44126139-44126158 | Msa1058950:CDS | 55.0% | |
| TCCTCCTGTTCATGGGGGTT+TGG | + | chr7_2:44126168-44126187 | Msa1058950:CDS | 55.0% | |
| ACCAAACCCCCATGAACAGG+AGG | - | chr7_2:44126172-44126191 | None:intergenic | 55.0% | |
| CCAACCAAACCCCCATGAAC+AGG | - | chr7_2:44126175-44126194 | None:intergenic | 55.0% | |
| ! | CCTGTTCATGGGGGTTTGGT+TGG | + | chr7_2:44126172-44126191 | Msa1058950:CDS | 55.0% |
| TCATCTGAGCCTGATCCTGC+TGG | + | chr7_2:44126196-44126215 | Msa1058950:CDS | 55.0% | |
| GCAACAGCTTGCACTGCAAC+AGG | - | chr7_2:44126951-44126970 | None:intergenic | 55.0% | |
| !!! | TTTTCAGGTTGTGCTGGGCG+AGG | + | chr7_2:44128180-44128199 | Msa1058950:intron | 55.0% |
| TGCAATGCTGACGGAGAACC+TGG | + | chr7_2:44128222-44128241 | Msa1058950:CDS | 55.0% | |
| CGAGATCCACAAGTCGCACA+AGG | - | chr7_2:44128522-44128541 | None:intergenic | 55.0% | |
| TGTGCGACTTGTGGATCTCG+TGG | + | chr7_2:44128522-44128541 | Msa1058950:CDS | 55.0% | |
| ! | TCCCCGGTGCCAATTTGAGT+GGG | + | chr7_2:44129947-44129966 | Msa1058950:intron | 55.0% |
| AGCCCACTCAAATTGGCACC+GGG | - | chr7_2:44129952-44129971 | None:intergenic | 55.0% | |
| ! | GACATGGTGACGCGAGTTAC+CGG | - | chr7_2:44130484-44130503 | None:intergenic | 55.0% |
| GCGTCACCATGTCTCATCGT+CGG | + | chr7_2:44130491-44130510 | Msa1058950:CDS | 55.0% | |
| GGATTGCCGACGATGAGACA+TGG | - | chr7_2:44130500-44130519 | None:intergenic | 55.0% | |
| GTAGCCGTCCTGCTCGAACA+TGG | + | chr7_2:44127807-44127826 | Msa1058950:CDS | 60.0% | |
| GAGACAGAGCCATACGCTGG+TGG | + | chr7_2:44127908-44127927 | Msa1058950:CDS | 60.0% | |
| !! | GTAACCCACTTGGGTTGGCC+TGG | + | chr7_2:44129868-44129887 | Msa1058950:intron | 60.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr7_2:44129875-44129894 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr7_2:44129876-44129895 | None:intergenic | 60.0% | |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr7_2:44129909-44129928 | Msa1058950:intron | 60.0% |
| GTGCTCCTCCTCAAGGTCTC+AGG | + | chr7_2:44129916-44129935 | Msa1058950:intron | 60.0% | |
| ! | CTCCCCGGTGCCAATTTGAG+TGG | + | chr7_2:44129946-44129965 | Msa1058950:intron | 60.0% |
| GCCCACTCAAATTGGCACCG+GGG | - | chr7_2:44129951-44129970 | None:intergenic | 60.0% | |
| ! | TCAGGTTGTGCTGGGCGAGG+AGG | + | chr7_2:44128183-44128202 | Msa1058950:intron | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr7_2:44129871-44129890 | Msa1058950:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 44125757 | 44130929 | 44125757 | ID=Msa1058950;Name=Msa1058950 |
| chr7_2 | mRNA | 44125757 | 44130929 | 44125757 | ID=Msa1058950-mRNA-1;Parent=Msa1058950;Name=Msa1058950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=138|1|1|1|1|1|7|302|416 |
| chr7_2 | exon | 44125757 | 44125916 | 44125757 | ID=Msa1058950-mRNA-1:exon:8031;Parent=Msa1058950-mRNA-1 |
| chr7_2 | exon | 44126041 | 44126217 | 44126041 | ID=Msa1058950-mRNA-1:exon:8032;Parent=Msa1058950-mRNA-1 |
| chr7_2 | exon | 44126958 | 44127024 | 44126958 | ID=Msa1058950-mRNA-1:exon:8033;Parent=Msa1058950-mRNA-1 |
| chr7_2 | exon | 44127739 | 44128070 | 44127739 | ID=Msa1058950-mRNA-1:exon:8034;Parent=Msa1058950-mRNA-1 |
| chr7_2 | exon | 44128187 | 44128328 | 44128187 | ID=Msa1058950-mRNA-1:exon:8035;Parent=Msa1058950-mRNA-1 |
| chr7_2 | exon | 44128488 | 44128613 | 44128488 | ID=Msa1058950-mRNA-1:exon:8036;Parent=Msa1058950-mRNA-1 |
| chr7_2 | exon | 44130243 | 44130929 | 44130243 | ID=Msa1058950-mRNA-1:exon:8037;Parent=Msa1058950-mRNA-1 |
| chr7_2 | five_prime_UTR | 44125757 | 44125894 | 44125757 | ID=Msa1058950-mRNA-1:five_prime_utr;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44125895 | 44125916 | 44125895 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44126041 | 44126217 | 44126041 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44126958 | 44127024 | 44126958 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44127739 | 44128070 | 44127739 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44128187 | 44128328 | 44128187 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44128488 | 44128613 | 44128488 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | CDS | 44130243 | 44130627 | 44130243 | ID=Msa1058950-mRNA-1:cds;Parent=Msa1058950-mRNA-1 |
| chr7_2 | three_prime_UTR | 44130628 | 44130929 | 44130628 | ID=Msa1058950-mRNA-1:three_prime_utr;Parent=Msa1058950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
