AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333220 MtrunA17_Chr4g0069291 96.207 580 18 2 33 608 1 580 0.0 1132
Msa1333220 MtrunA17_Chr7g0269591 29.752 363 218 8 148 484 175 526 1.04e-39 155
Msa1333220 MtrunA17_Chr8g0344131 29.261 352 212 7 140 484 242 563 1.27e-33 136
Msa1333220 MtrunA17_Chr5g0395711 36.719 128 74 3 335 461 443 564 2.54e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333220 AT3G17470.2 69.275 524 154 3 90 606 72 595 0.0 712
Msa1333220 AT3G17470.1 69.275 524 154 3 90 606 57 580 0.0 712
Msa1333220 AT3G17470.3 68.668 383 118 1 90 470 57 439 0.0 543
Msa1333220 AT1G54130.1 32.530 332 191 7 140 463 234 540 5.10e-38 150
Msa1333220 AT3G14050.1 32.530 332 190 9 141 463 230 536 7.72e-37 146
Msa1333220 AT4G02260.3 29.969 327 199 7 148 455 177 492 1.11e-36 146
Msa1333220 AT4G02260.2 29.787 329 201 7 148 457 177 494 1.88e-36 146
Msa1333220 AT4G02260.4 29.787 329 201 7 148 457 177 494 1.95e-36 146
Msa1333220 AT4G02260.1 29.697 330 201 8 148 457 177 495 6.68e-35 141

Find 165 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGAAAATCTTTA+AGG 0.162251 8_4:-53256920 None:intergenic
TGACATTAGAGCTTTGATTT+TGG 0.217842 8_4:+53255971 Msa1333220:CDS
GACCCTCAACCTATCCTTAA+AGG 0.231562 8_4:+53257629 Msa1333220:three_prime_UTR
GCCTTCCACGAATATCTTAT+AGG 0.237824 8_4:+53257581 Msa1333220:three_prime_UTR
ATCCACTAATTCCGCAAGTA+TGG 0.254255 8_4:-53256270 None:intergenic
AGCACATCATTTACATCTTC+TGG 0.271709 8_4:-53256365 None:intergenic
CATGCTGGCTGCAGCTGAAC+TGG 0.295606 8_4:+53256887 Msa1333220:CDS
CATGCTTCTCGCTGATCTTC+AGG 0.298040 8_4:+53254779 Msa1333220:CDS
GCAGTGGATGTAAGTGAAAT+TGG 0.300443 8_4:+53256560 Msa1333220:CDS
TAACTACATATCACTTGAAT+TGG 0.301558 8_4:+53256112 Msa1333220:CDS
CAGGTATATAATAAGGAGTT+TGG 0.304931 8_4:+53257472 Msa1333220:CDS
TTCCTCTTTACAAACGGTTC+TGG 0.309806 8_4:-53257672 None:intergenic
TTTCCAAGTGCAAATCATAA+AGG 0.319956 8_4:+53256930 Msa1333220:CDS
TGAAGTTTCATCCACAATAT+TGG 0.326226 8_4:+53254328 Msa1333220:CDS
TTTAATTCAGGTATATAATA+AGG 0.339845 8_4:+53257465 Msa1333220:CDS
AGAGGAGAGCTTTGAAGAAC+AGG 0.345980 8_4:-53254711 None:intergenic
GTGGATGATATCTCAGTTAA+AGG 0.351684 8_4:+53256287 Msa1333220:CDS
TGCATCTAGAGTAGACATTC+TGG 0.356083 8_4:+53255902 Msa1333220:CDS
TCCACATAAAGATATGAATA+AGG 0.356386 8_4:-53256161 None:intergenic
GTTTCTTATTCAACTTTCAT+TGG 0.365023 8_4:-53254292 None:intergenic
GGCAAATCTTATACAACAAT+TGG 0.368357 8_4:-53257561 None:intergenic
GGATTTCTTTCCACATAGAT+TGG 0.373050 8_4:-53256475 None:intergenic
AATGCATTATCTCCAGACTT+AGG 0.376086 8_4:-53256410 None:intergenic
AGGTTCTGCTACTGCTCATT+TGG 0.380091 8_4:+53255851 Msa1333220:CDS
CTGGAGAGAGAGCGTGCTAC+AGG 0.382710 8_4:+53256438 Msa1333220:CDS
TTCCAAGTGCAAATCATAAA+GGG 0.388198 8_4:+53256931 Msa1333220:CDS
TGGGAGGACTAGACCCTTGA+TGG 0.390942 8_4:+53256580 Msa1333220:CDS
GATTATATTGCCAGGCCAAA+AGG 0.405490 8_4:+53256512 Msa1333220:CDS
ACAGATAAGAACTACTGAAA+TGG 0.407491 8_4:+53256607 Msa1333220:CDS
TGATGAATACAAGAAAATAT+TGG 0.408026 8_4:+53257411 Msa1333220:CDS
TAAGCGGTGGTGAGTGGTAG+TGG 0.408658 8_4:-53254487 None:intergenic
AGATGATAGTGGTTTAATTC+AGG 0.409345 8_4:+53257453 Msa1333220:CDS
CATATCTTTATGTGGATACA+TGG 0.412806 8_4:+53256168 Msa1333220:CDS
CGAGATGGTTCGTAATTTAG+AGG 0.415458 8_4:+53257381 Msa1333220:CDS
AGCCAGAACCGTTTGTAAAG+AGG 0.417258 8_4:+53257670 Msa1333220:three_prime_UTR
ACCCTCAACCTATCCTTAAA+GGG 0.428322 8_4:+53257630 Msa1333220:three_prime_UTR
TTGAGAGAGGTGTTGGAAGT+AGG 0.431304 8_4:+53255795 Msa1333220:CDS
GAAAGAGGAGAGCGACCATC+AGG 0.433390 8_4:-53254738 None:intergenic
CACAATGAAGAAGCTCTTGA+AGG 0.442293 8_4:+53256331 Msa1333220:CDS
ATGCATTATCTCCAGACTTA+GGG 0.442953 8_4:-53256409 None:intergenic
ATGGTGGCGCGTGGGGTAAT+CGG 0.443215 8_4:-53254448 None:intergenic
TCCCATACTTGCGGAATTAG+TGG 0.444671 8_4:+53256268 Msa1333220:CDS
ATGATCTGCTGCTGATACCT+TGG 0.450610 8_4:-53256038 None:intergenic
CATGGCAATGGATAAAGCTT+TGG 0.451814 8_4:-53254760 None:intergenic
AAGAAAACACTAACCTCCTC+TGG 0.456445 8_4:-53256689 None:intergenic
TCCTTATTCATATCTTTATG+TGG 0.459286 8_4:+53256160 Msa1333220:CDS
ATGTCATGTGCATCTTCTCC+TGG 0.459375 8_4:-53257059 None:intergenic
AAAATATTCCTCTTTACAAA+CGG 0.460364 8_4:-53257678 None:intergenic
CTTGACATGATGAGGCATCT+TGG 0.461356 8_4:+53256008 Msa1333220:CDS
GCGTGTGCTGTAGAAGTTCC+CGG 0.463247 8_4:+53254573 Msa1333220:CDS
TCTTATCTGTATTTCCATCA+AGG 0.463566 8_4:-53256594 None:intergenic
TTCTCGACAAGAACGGAGAT+GGG 0.464209 8_4:+53256988 Msa1333220:CDS
CATGAAGTTCGAAGTCAGAT+AGG 0.464988 8_4:+53255831 Msa1333220:CDS
TGGATACAAAAGTTTGCATA+TGG 0.465288 8_4:+53256538 Msa1333220:CDS
GAGCGACCATCAGGAGTAAG+AGG 0.466122 8_4:-53254729 None:intergenic
GGAACTTACAGAGGTGATAG+AGG 0.467883 8_4:+53257025 Msa1333220:CDS
CTTCATATGGCAGATGATAG+TGG 0.471188 8_4:+53257442 Msa1333220:CDS
ATTATATTGCCAGGCCAAAA+GGG 0.474542 8_4:+53256513 Msa1333220:CDS
GTGACGCGGGTGGGTCGAGT+GGG 0.475192 8_4:-53254525 None:intergenic
TGCTCCTCTTGCTCATGCTG+TGG 0.479821 8_4:+53256085 Msa1333220:CDS
ATAATAAGGAGTTTGGCAAC+AGG 0.480517 8_4:+53257479 Msa1333220:CDS
CCCCTTTAAGGATAGGTTGA+GGG 0.481740 8_4:-53257631 None:intergenic
GTGTTATCCACAAGTTCCTC+TGG 0.484331 8_4:+53254657 Msa1333220:CDS
TGAATGTAATGTAATGTTGT+TGG 0.484720 8_4:-53254372 None:intergenic
AGCTCTCCTCTTACTCCTGA+TGG 0.487226 8_4:+53254723 Msa1333220:CDS
GGAGATAATGCATTGGAAGC+TGG 0.491096 8_4:+53256419 Msa1333220:CDS
ACGGTGAGTTTAGGAGAGTA+TGG 0.491382 8_4:+53254239 None:intergenic
CTTCTCGACAAGAACGGAGA+TGG 0.492481 8_4:+53256987 Msa1333220:CDS
GGTGACGCGGGTGGGTCGAG+TGG 0.492820 8_4:-53254526 None:intergenic
ATTGGATGAGAAACTTCATA+TGG 0.494227 8_4:+53257429 Msa1333220:CDS
GTGGTGTTGAACCCTAAGTC+TGG 0.496487 8_4:+53256398 Msa1333220:CDS
TGTGGAAAGAAATCCCTTCT+CGG 0.498703 8_4:+53256483 Msa1333220:CDS
TCTCCTCTCTCTTCTTCTAG+TGG 0.501351 8_4:-53254268 None:intergenic
CAGTGGATGTAAGTGAAATT+GGG 0.501702 8_4:+53256561 Msa1333220:CDS
TGGTTTGTTTGAGAAGAGAA+TGG 0.502046 8_4:-53254467 None:intergenic
GATGCAGAAGTTATATCTGC+TGG 0.508548 8_4:+53255768 Msa1333220:CDS
TATCACCATCTTTCCTCCAC+CGG 0.511134 8_4:-53254592 None:intergenic
ACTCGACCCACCCGCGTCAC+CGG 0.513152 8_4:+53254528 Msa1333220:CDS
TGAGAGTAAGCGGTGGTGAG+TGG 0.513797 8_4:-53254493 None:intergenic
GGATACATGGTTGAGAAGTC+AGG 0.514914 8_4:+53256181 Msa1333220:CDS
ATAGAGGAGCTTGGTGCACC+AGG 0.521684 8_4:+53257041 Msa1333220:CDS
ACGCTCTCGGAGTGGACCAC+CGG 0.522401 8_4:-53254554 None:intergenic
CTTATCTGTATTTCCATCAA+GGG 0.524648 8_4:-53256593 None:intergenic
CCGGAGACCGGTGACGCGGG+TGG 0.524804 8_4:-53254535 None:intergenic
ATCCCTTTATGATTTGCACT+TGG 0.525949 8_4:-53256933 None:intergenic
GCTCCTCTTGCTCATGCTGT+GGG 0.528069 8_4:+53256086 Msa1333220:CDS
CAAAAGTTTGCATATGGCAG+TGG 0.532210 8_4:+53256544 Msa1333220:CDS
CCACCCGCGTCACCGGTCTC+CGG 0.535267 8_4:+53254535 Msa1333220:CDS
AGTTCCCGGTGGAGGAAAGA+TGG 0.535806 8_4:+53254587 Msa1333220:CDS
ATTGCCAGGCCAAAAGGGAA+TGG 0.535893 8_4:+53256518 Msa1333220:CDS
ATGGATAGGTTAGCTGTTGG+TGG 0.537695 8_4:+53256626 Msa1333220:CDS
TCTCATTCATTATACAAGGC+TGG 0.539860 8_4:+53256656 Msa1333220:CDS
AAGAAGACCAGAGGAACTTG+TGG 0.542935 8_4:-53254664 None:intergenic
TCTCTCTTCTTCTAGTGGAG+TGG 0.543876 8_4:-53254263 None:intergenic
CTTCTTGACTCGAACAGTGA+TGG 0.544084 8_4:+53257089 Msa1333220:CDS
TTTCGCCTTCTCGACAAGAA+CGG 0.544865 8_4:+53256981 Msa1333220:CDS
CATCTCCGTTCTTGTCGAGA+AGG 0.545112 8_4:-53256986 None:intergenic
GGCATCTTGGTCACCTTCCA+AGG 0.547221 8_4:+53256021 Msa1333220:CDS
ATGGATAAAGCTTTGGAAAG+AGG 0.547465 8_4:-53254753 None:intergenic
TAGGTTAGCTGTTGGTGGAA+TGG 0.547704 8_4:+53256631 Msa1333220:CDS
ACTTCTACAGCACACGCTCT+CGG 0.548640 8_4:-53254567 None:intergenic
CGGAGTGGACCACCGGAGAC+CGG 0.548762 8_4:-53254547 None:intergenic
GGACTAAAGATTATATTGCC+AGG 0.550792 8_4:+53256504 Msa1333220:CDS
CTGAAATTCATCAGAGCTGA+GGG 0.550894 8_4:-53257114 None:intergenic
GGAAGAAGAGTGAGAGTAAG+CGG 0.551427 8_4:-53254503 None:intergenic
GAAACACAACACCAATATTG+TGG 0.553162 8_4:-53254339 None:intergenic
TCCACTAATTCCGCAAGTAT+GGG 0.553251 8_4:-53256269 None:intergenic
GCTGTAGAAGTTCCCGGTGG+AGG 0.555769 8_4:+53254579 Msa1333220:CDS
GAAACTTCATCTTGTCGTTG+CGG 0.556978 8_4:-53254314 None:intergenic
TGACGCGGGTGGGTCGAGTG+GGG 0.558230 8_4:-53254524 None:intergenic
ATCAGCGAGAAGCATGGCAA+TGG 0.559213 8_4:-53254772 None:intergenic
ATCAAATCATCCAATCTATG+TGG 0.562146 8_4:+53256465 Msa1333220:CDS
GAAGATGTAAATGATGTGCT+TGG 0.567130 8_4:+53256368 Msa1333220:CDS
CTTTGAAGCTTGACATGATG+AGG 0.569527 8_4:+53256000 Msa1333220:CDS
AGAGCTTTGAAGAACAGGAA+TGG 0.570567 8_4:-53254706 None:intergenic
TGGAATATTGAGAGAGGTGT+TGG 0.571119 8_4:+53255788 Msa1333220:CDS
AGTATCCTATAAGATATTCG+TGG 0.573789 8_4:-53257586 None:intergenic
TAAGAACTACTGAAATGGAT+AGG 0.574391 8_4:+53256612 Msa1333220:CDS
TATAATCTTTAGTCCGAGAA+GGG 0.574454 8_4:-53256496 None:intergenic
GGCATCTCATTCATTATACA+AGG 0.575422 8_4:+53256652 Msa1333220:CDS
GAGAAGAGAATGGTGGCGCG+TGG 0.575660 8_4:-53254457 None:intergenic
CTCACTTAGATAATCTATTG+TGG 0.576514 8_4:+53257607 Msa1333220:three_prime_UTR
TTCAGCTGCAGCCAGCATGA+TGG 0.579396 8_4:-53256883 None:intergenic
AGAAGAGAATGGTGGCGCGT+GGG 0.580259 8_4:-53254456 None:intergenic
ATCACCATCTTTCCTCCACC+GGG 0.581759 8_4:-53254591 None:intergenic
ACCACCGGAGACCGGTGACG+CGG 0.582141 8_4:-53254539 None:intergenic
ATGAAGAAGCTCTTGAAGGA+TGG 0.584555 8_4:+53256335 Msa1333220:CDS
ATATAATCTTTAGTCCGAGA+AGG 0.585270 8_4:-53256497 None:intergenic
AGAAGAGTGAGAGTAAGCGG+TGG 0.586254 8_4:-53254500 None:intergenic
TGGTTGAGAAGTCAGGAGAC+AGG 0.587107 8_4:+53256188 Msa1333220:CDS
ATTCCCACAGCATGAGCAAG+AGG 0.587161 8_4:-53256089 None:intergenic
CGGAGACCGGTGACGCGGGT+GGG 0.591943 8_4:-53254534 None:intergenic
TAAGTCTGGAGATAATGCAT+TGG 0.596696 8_4:+53256412 Msa1333220:CDS
GCGTTTAAAGACCATCATGC+TGG 0.599824 8_4:+53256872 Msa1333220:CDS
CCACCGGAGACCGGTGACGC+GGG 0.602844 8_4:-53254538 None:intergenic
AGAAGCTCTTGAAGGATGGT+CGG 0.606805 8_4:+53256339 Msa1333220:CDS
TGGAGAGAGAGCGTGCTACA+GGG 0.607107 8_4:+53256439 Msa1333220:CDS
TCCTATAAGATATTCGTGGA+AGG 0.611103 8_4:-53257582 None:intergenic
GAAGAGAATGGTGGCGCGTG+GGG 0.611821 8_4:-53254455 None:intergenic
TACAGCACACGCTCTCGGAG+TGG 0.612388 8_4:-53254562 None:intergenic
ACAGAGGTGATAGAGGAGCT+TGG 0.612835 8_4:+53257032 Msa1333220:CDS
AAAATCTGATCCCATACTTG+CGG 0.616260 8_4:+53256259 Msa1333220:CDS
CCCGCGTCACCGGTCTCCGG+TGG 0.617971 8_4:+53254538 Msa1333220:CDS
CCCTCAACCTATCCTTAAAG+GGG 0.621541 8_4:+53257631 Msa1333220:three_prime_UTR
TCTGCTGCTGATACCTTGGA+AGG 0.625070 8_4:-53256034 None:intergenic
CTGAAGATCAGCGAGAAGCA+TGG 0.633168 8_4:-53254778 None:intergenic
TGATTTGACTGAGAGGATGA+AGG 0.637086 8_4:+53254635 Msa1333220:CDS
CTTTCAATGATTTGACTGAG+AGG 0.637305 8_4:+53254628 Msa1333220:CDS
TCTGAAATTCATCAGAGCTG+AGG 0.641418 8_4:-53257115 None:intergenic
AGATGGGAAGATAAGCATTG+AGG 0.649781 8_4:+53257004 Msa1333220:CDS
ATCTGCTGGAATATTGAGAG+AGG 0.655258 8_4:+53255782 Msa1333220:CDS
GGCTGGTCTTACTAATCCAG+AGG 0.657487 8_4:+53256673 Msa1333220:CDS
AAGATGGTGATAGAGCTTGT+CGG 0.658286 8_4:+53254603 Msa1333220:CDS
TGATGTGCTTGGACTGCGAG+TGG 0.660485 8_4:+53256379 Msa1333220:CDS
TGGTCTTACTAATCCAGAGG+AGG 0.668643 8_4:+53256676 Msa1333220:CDS
GCGTGGGGTAATCGGAAGCG+TGG 0.673355 8_4:-53254440 None:intergenic
TGATTTGAAAAGAAGACCAG+AGG 0.678594 8_4:-53254673 None:intergenic
TGGATGTAAGTGAAATTGGG+AGG 0.681330 8_4:+53256564 Msa1333220:CDS
TTTGTTTGAGAAGAGAATGG+TGG 0.686445 8_4:-53254464 None:intergenic
AAGCATTGAGGAACTTACAG+AGG 0.688318 8_4:+53257016 Msa1333220:CDS
ACTCCACTAGAAGAAGAGAG+AGG 0.694188 8_4:+53254265 Msa1333220:five_prime_UTR
GAAATGGATAGGTTAGCTGT+TGG 0.706251 8_4:+53256623 Msa1333220:CDS
TTGAGAAGTCAGGAGACAGG+TGG 0.721078 8_4:+53256191 Msa1333220:CDS
CCTCAACCTATCCTTAAAGG+GGG 0.725183 8_4:+53257632 Msa1333220:three_prime_UTR
TGTGCTGTAGAAGTTCCCGG+TGG 0.767826 8_4:+53254576 Msa1333220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGAAAATATTCCTTTTTT+AGG + chr8_4:53254978-53254997 Msa1333220:intron 15.0%
!!! TAAAAAAAAGATTCCTTTTT+AGG + chr8_4:53255016-53255035 Msa1333220:intron 15.0%
!!! TCTATTTGTTTTATTAGTTA+AGG - chr8_4:53255288-53255307 None:intergenic 15.0%
!! ATAATGTTAGATAATAGATA+TGG + chr8_4:53255331-53255350 Msa1333220:intron 15.0%
!!! GCAATTGATTTTAAATAATT+TGG - chr8_4:53255517-53255536 None:intergenic 15.0%
!! TACTATAAAGAAACAATAAA+CGG - chr8_4:53255732-53255751 None:intergenic 15.0%
!! TTTAATTCAGGTATATAATA+AGG + chr8_4:53257465-53257484 Msa1333220:CDS 15.0%
!! ATGAAAATGAATGAAAGTAA+TGG - chr8_4:53254811-53254830 None:intergenic 20.0%
!! GGTATCGTTAAAAAATTAAT+TGG - chr8_4:53254901-53254920 None:intergenic 20.0%
!! AAGTCAATAAATAGTAATCA+TGG - chr8_4:53254922-53254941 None:intergenic 20.0%
!!! TATTTTCTTATATTTCAGAC+CGG - chr8_4:53254968-53254987 None:intergenic 20.0%
!! ATTATTCAATGAACCTAAAA+AGG - chr8_4:53255032-53255051 None:intergenic 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG + chr8_4:53255115-53255134 Msa1333220:intron 20.0%
!! AATATTGTGGTATACATATA+AGG + chr8_4:53255142-53255161 Msa1333220:intron 20.0%
!!! ATAATTGATTTTGACATGTT+TGG + chr8_4:53255415-53255434 Msa1333220:intron 20.0%
!!! TGTTTTATTTTTTGATACTC+AGG + chr8_4:53256845-53256864 Msa1333220:intron 20.0%
!! AGTTGTACATAATTTCTTAA+TGG + chr8_4:53257239-53257258 Msa1333220:intron 20.0%
!! TGATGAATACAAGAAAATAT+TGG + chr8_4:53257411-53257430 Msa1333220:CDS 20.0%
!! AAAATATTCCTCTTTACAAA+CGG - chr8_4:53257681-53257700 None:intergenic 20.0%
! GTTTCTTATTCAACTTTCAT+TGG - chr8_4:53254295-53254314 None:intergenic 25.0%
! TGAATGTAATGTAATGTTGT+TGG - chr8_4:53254375-53254394 None:intergenic 25.0%
! AACAAATAGATAAGCTTAGA+AGG + chr8_4:53255298-53255317 Msa1333220:intron 25.0%
! CAAGTTAGAATCAATTATAG+AGG - chr8_4:53255466-53255485 None:intergenic 25.0%
!! AATTTCAGTAAGAGTTTGTT+TGG - chr8_4:53255674-53255693 None:intergenic 25.0%
! TAACTACATATCACTTGAAT+TGG + chr8_4:53256112-53256131 Msa1333220:CDS 25.0%
! TCCTTATTCATATCTTTATG+TGG + chr8_4:53256160-53256179 Msa1333220:CDS 25.0%
! TCCACATAAAGATATGAATA+AGG - chr8_4:53256164-53256183 None:intergenic 25.0%
TGAAGTTTCATCCACAATAT+TGG + chr8_4:53254328-53254347 Msa1333220:CDS 30.0%
! AAGTGTAAGAGTTCCATTTT+TGG - chr8_4:53254420-53254439 None:intergenic 30.0%
TTGAGACTTGAACCTAAAAA+AGG - chr8_4:53254993-53255012 None:intergenic 30.0%
CATTGAGTAGTTAATGTATG+TGG - chr8_4:53255080-53255099 None:intergenic 30.0%
!! AATTTGACATTTTGAGAGCA+AGG + chr8_4:53255183-53255202 Msa1333220:intron 30.0%
ATAATTTGGTTATGTGTCTC+TGG - chr8_4:53255503-53255522 None:intergenic 30.0%
TTGCAGTTAACAAAACACAT+AGG + chr8_4:53255533-53255552 Msa1333220:intron 30.0%
AACAGCTACTATACTCTTAA+TGG - chr8_4:53255572-53255591 None:intergenic 30.0%
CAATGAAATTATGACACTCA+AGG - chr8_4:53255709-53255728 None:intergenic 30.0%
ATAGTAAATGTGATTGCAGA+TGG + chr8_4:53255746-53255765 Msa1333220:intron 30.0%
!! TGACATTAGAGCTTTGATTT+TGG + chr8_4:53255971-53255990 Msa1333220:CDS 30.0%
CATATCTTTATGTGGATACA+TGG + chr8_4:53256168-53256187 Msa1333220:CDS 30.0%
ATCAAATCATCCAATCTATG+TGG + chr8_4:53256465-53256484 Msa1333220:CDS 30.0%
TATAATCTTTAGTCCGAGAA+GGG - chr8_4:53256499-53256518 None:intergenic 30.0%
ATATAATCTTTAGTCCGAGA+AGG - chr8_4:53256500-53256519 None:intergenic 30.0%
TGGATACAAAAGTTTGCATA+TGG + chr8_4:53256538-53256557 Msa1333220:CDS 30.0%
CTTATCTGTATTTCCATCAA+GGG - chr8_4:53256596-53256615 None:intergenic 30.0%
TCTTATCTGTATTTCCATCA+AGG - chr8_4:53256597-53256616 None:intergenic 30.0%
ACAGATAAGAACTACTGAAA+TGG + chr8_4:53256607-53256626 Msa1333220:CDS 30.0%
TAAGAACTACTGAAATGGAT+AGG + chr8_4:53256612-53256631 Msa1333220:CDS 30.0%
CTTGCAAAGATGAATGAATA+CGG - chr8_4:53256724-53256743 None:intergenic 30.0%
! TTTTTCATGTCTAAGGAGTT+AGG - chr8_4:53256806-53256825 None:intergenic 30.0%
!! TTCCTTCTTTTTCATGTCTA+AGG - chr8_4:53256813-53256832 None:intergenic 30.0%
GACATGAAAAAGAAGGAAAT+TGG + chr8_4:53256815-53256834 Msa1333220:intron 30.0%
TTGCACTTGGAAAATCTTTA+AGG - chr8_4:53256923-53256942 None:intergenic 30.0%
TTTCCAAGTGCAAATCATAA+AGG + chr8_4:53256930-53256949 Msa1333220:CDS 30.0%
TTCCAAGTGCAAATCATAAA+GGG + chr8_4:53256931-53256950 Msa1333220:CDS 30.0%
ATTTCAGATGTTCCAAAAAC+AGG + chr8_4:53257130-53257149 Msa1333220:CDS 30.0%
TAGCTCAAGTATATATGCTT+TGG - chr8_4:53257281-53257300 None:intergenic 30.0%
TATGTAACTCTAGTGGTATT+TGG + chr8_4:53257348-53257367 Msa1333220:intron 30.0%
ATTGGATGAGAAACTTCATA+TGG + chr8_4:53257429-53257448 Msa1333220:CDS 30.0%
!! AGATGATAGTGGTTTAATTC+AGG + chr8_4:53257453-53257472 Msa1333220:CDS 30.0%
CAGGTATATAATAAGGAGTT+TGG + chr8_4:53257472-53257491 Msa1333220:CDS 30.0%
GGCAAATCTTATACAACAAT+TGG - chr8_4:53257564-53257583 None:intergenic 30.0%
AGTATCCTATAAGATATTCG+TGG - chr8_4:53257589-53257608 None:intergenic 30.0%
CTCACTTAGATAATCTATTG+TGG + chr8_4:53257607-53257626 Msa1333220:three_prime_UTR 30.0%
GAAACACAACACCAATATTG+TGG - chr8_4:53254342-53254361 None:intergenic 35.0%
ACTACGCATTGAACCAAAAA+TGG + chr8_4:53254404-53254423 Msa1333220:CDS 35.0%
TTTGTTTGAGAAGAGAATGG+TGG - chr8_4:53254467-53254486 None:intergenic 35.0%
!! TGGTTTGTTTGAGAAGAGAA+TGG - chr8_4:53254470-53254489 None:intergenic 35.0%
CTTTCAATGATTTGACTGAG+AGG + chr8_4:53254628-53254647 Msa1333220:CDS 35.0%
TGATTTGAAAAGAAGACCAG+AGG - chr8_4:53254676-53254695 None:intergenic 35.0%
!! ATGGATAAAGCTTTGGAAAG+AGG - chr8_4:53254756-53254775 None:intergenic 35.0%
TTCTTATATTTCAGACCGGA+GGG - chr8_4:53254964-53254983 None:intergenic 35.0%
TTTCTTATATTTCAGACCGG+AGG - chr8_4:53254965-53254984 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + chr8_4:53255118-53255137 Msa1333220:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG + chr8_4:53255119-53255138 Msa1333220:intron 35.0%
!! AGTGTTGTTTAGTCTCAGTT+TGG + chr8_4:53255211-53255230 Msa1333220:intron 35.0%
!! TAAGCTTAGAAGGTTGATGA+TGG + chr8_4:53255308-53255327 Msa1333220:intron 35.0%
TTTCACCAAACACACATGTA+AGG - chr8_4:53255382-53255401 None:intergenic 35.0%
!! TGTGTGTTTGGTGAAACTTT+TGG + chr8_4:53255386-53255405 Msa1333220:intron 35.0%
!! TAGAGCTTTGATTTTGGACT+TGG + chr8_4:53255977-53255996 Msa1333220:CDS 35.0%
AAAATCTGATCCCATACTTG+CGG + chr8_4:53256259-53256278 Msa1333220:CDS 35.0%
GTGGATGATATCTCAGTTAA+AGG + chr8_4:53256287-53256306 Msa1333220:CDS 35.0%
AGCACATCATTTACATCTTC+TGG - chr8_4:53256368-53256387 None:intergenic 35.0%
GAAGATGTAAATGATGTGCT+TGG + chr8_4:53256368-53256387 Msa1333220:CDS 35.0%
ATGCATTATCTCCAGACTTA+GGG - chr8_4:53256412-53256431 None:intergenic 35.0%
AATGCATTATCTCCAGACTT+AGG - chr8_4:53256413-53256432 None:intergenic 35.0%
TAAGTCTGGAGATAATGCAT+TGG + chr8_4:53256412-53256431 Msa1333220:CDS 35.0%
GGATTTCTTTCCACATAGAT+TGG - chr8_4:53256478-53256497 None:intergenic 35.0%
GGACTAAAGATTATATTGCC+AGG + chr8_4:53256504-53256523 Msa1333220:CDS 35.0%
ATTATATTGCCAGGCCAAAA+GGG + chr8_4:53256513-53256532 Msa1333220:CDS 35.0%
! CTTTTGTATCCATTCCCTTT+TGG - chr8_4:53256530-53256549 None:intergenic 35.0%
CAGTGGATGTAAGTGAAATT+GGG + chr8_4:53256561-53256580 Msa1333220:CDS 35.0%
GGCATCTCATTCATTATACA+AGG + chr8_4:53256652-53256671 Msa1333220:CDS 35.0%
TCTCATTCATTATACAAGGC+TGG + chr8_4:53256656-53256675 Msa1333220:CDS 35.0%
CTCCTTAGACATGAAAAAGA+AGG + chr8_4:53256808-53256827 Msa1333220:intron 35.0%
! ATCCCTTTATGATTTGCACT+TGG - chr8_4:53256936-53256955 None:intergenic 35.0%
! GACATCAAATCACCTGTTTT+TGG - chr8_4:53257145-53257164 None:intergenic 35.0%
AGGTGATTTGATGTCTTATC+AGG + chr8_4:53257150-53257169 Msa1333220:intron 35.0%
! TGCTTTGGTAATCAGATAGT+TGG - chr8_4:53257266-53257285 None:intergenic 35.0%
TTACATACAACTCATGAGAC+AGG - chr8_4:53257335-53257354 None:intergenic 35.0%
TGAGTTGTATGTAACTCTAG+TGG + chr8_4:53257341-53257360 Msa1333220:intron 35.0%
!!! CTAGTGGTATTTGGTTTTGT+AGG + chr8_4:53257357-53257376 Msa1333220:intron 35.0%
ATAATAAGGAGTTTGGCAAC+AGG + chr8_4:53257479-53257498 Msa1333220:CDS 35.0%
TCCTATAAGATATTCGTGGA+AGG - chr8_4:53257585-53257604 None:intergenic 35.0%
GAAACTTCATCTTGTCGTTG+CGG - chr8_4:53254317-53254336 None:intergenic 40.0%
AAGATGGTGATAGAGCTTGT+CGG + chr8_4:53254603-53254622 Msa1333220:CDS 40.0%
TGATTTGACTGAGAGGATGA+AGG + chr8_4:53254635-53254654 Msa1333220:CDS 40.0%
!! AGAGCTTTGAAGAACAGGAA+TGG - chr8_4:53254709-53254728 None:intergenic 40.0%
CATGGCAATGGATAAAGCTT+TGG - chr8_4:53254763-53254782 None:intergenic 40.0%
GTATACCACAATATTCCCTC+CGG - chr8_4:53255137-53255156 None:intergenic 40.0%
!! TGACATTTTGAGAGCAAGGA+AGG + chr8_4:53255187-53255206 Msa1333220:intron 40.0%
GTTGACCTTACATGTGTGTT+TGG + chr8_4:53255374-53255393 Msa1333220:intron 40.0%
!! GTGTTTGGTGAAACTTTTGG+AGG + chr8_4:53255389-53255408 Msa1333220:intron 40.0%
GATGCAGAAGTTATATCTGC+TGG + chr8_4:53255768-53255787 Msa1333220:CDS 40.0%
ATCTGCTGGAATATTGAGAG+AGG + chr8_4:53255782-53255801 Msa1333220:CDS 40.0%
! TGGAATATTGAGAGAGGTGT+TGG + chr8_4:53255788-53255807 Msa1333220:CDS 40.0%
CATGAAGTTCGAAGTCAGAT+AGG + chr8_4:53255831-53255850 Msa1333220:CDS 40.0%
! TGCATCTAGAGTAGACATTC+TGG + chr8_4:53255902-53255921 Msa1333220:CDS 40.0%
!! CTTTGAAGCTTGACATGATG+AGG + chr8_4:53256000-53256019 Msa1333220:CDS 40.0%
TCCACTAATTCCGCAAGTAT+GGG - chr8_4:53256272-53256291 None:intergenic 40.0%
ATCCACTAATTCCGCAAGTA+TGG - chr8_4:53256273-53256292 None:intergenic 40.0%
CACAATGAAGAAGCTCTTGA+AGG + chr8_4:53256331-53256350 Msa1333220:CDS 40.0%
ATGAAGAAGCTCTTGAAGGA+TGG + chr8_4:53256335-53256354 Msa1333220:CDS 40.0%
TGTGGAAAGAAATCCCTTCT+CGG + chr8_4:53256483-53256502 Msa1333220:CDS 40.0%
GATTATATTGCCAGGCCAAA+AGG + chr8_4:53256512-53256531 Msa1333220:CDS 40.0%
CAAAAGTTTGCATATGGCAG+TGG + chr8_4:53256544-53256563 Msa1333220:CDS 40.0%
GCAGTGGATGTAAGTGAAAT+TGG + chr8_4:53256560-53256579 Msa1333220:CDS 40.0%
TGGATGTAAGTGAAATTGGG+AGG + chr8_4:53256564-53256583 Msa1333220:CDS 40.0%
! GAAATGGATAGGTTAGCTGT+TGG + chr8_4:53256623-53256642 Msa1333220:CDS 40.0%
AAGAAAACACTAACCTCCTC+TGG - chr8_4:53256692-53256711 None:intergenic 40.0%
TCTAAGGAGTTAGGTCTAGA+TGG - chr8_4:53256797-53256816 None:intergenic 40.0%
! AGATGGGAAGATAAGCATTG+AGG + chr8_4:53257004-53257023 Msa1333220:CDS 40.0%
!! AAGCATTGAGGAACTTACAG+AGG + chr8_4:53257016-53257035 Msa1333220:CDS 40.0%
CTGAAATTCATCAGAGCTGA+GGG - chr8_4:53257117-53257136 None:intergenic 40.0%
! TCTGAAATTCATCAGAGCTG+AGG - chr8_4:53257118-53257137 None:intergenic 40.0%
!!! TTTGGTTTTGTAGGTCGAGA+TGG + chr8_4:53257366-53257385 Msa1333220:intron 40.0%
CGAGATGGTTCGTAATTTAG+AGG + chr8_4:53257381-53257400 Msa1333220:CDS 40.0%
CTTCATATGGCAGATGATAG+TGG + chr8_4:53257442-53257461 Msa1333220:CDS 40.0%
GCCTTCCACGAATATCTTAT+AGG + chr8_4:53257581-53257600 Msa1333220:three_prime_UTR 40.0%
ACCCTCAACCTATCCTTAAA+GGG + chr8_4:53257630-53257649 Msa1333220:three_prime_UTR 40.0%
!! TTTTCACCCCCTTTAAGGAT+AGG - chr8_4:53257641-53257660 None:intergenic 40.0%
! GACTATTTTCACCCCCTTTA+AGG - chr8_4:53257646-53257665 None:intergenic 40.0%
TTCCTCTTTACAAACGGTTC+TGG - chr8_4:53257675-53257694 None:intergenic 40.0%
TCTCTCTTCTTCTAGTGGAG+TGG - chr8_4:53254266-53254285 None:intergenic 45.0%
ACTCCACTAGAAGAAGAGAG+AGG + chr8_4:53254265-53254284 Msa1333220:five_prime_UTR 45.0%
TCTCCTCTCTCTTCTTCTAG+TGG - chr8_4:53254271-53254290 None:intergenic 45.0%
GGAAGAAGAGTGAGAGTAAG+CGG - chr8_4:53254506-53254525 None:intergenic 45.0%
TATCACCATCTTTCCTCCAC+CGG - chr8_4:53254595-53254614 None:intergenic 45.0%
GTGTTATCCACAAGTTCCTC+TGG + chr8_4:53254657-53254676 Msa1333220:CDS 45.0%
AAGAAGACCAGAGGAACTTG+TGG - chr8_4:53254667-53254686 None:intergenic 45.0%
!! AGAGGAGAGCTTTGAAGAAC+AGG - chr8_4:53254714-53254733 None:intergenic 45.0%
TCTTAAACTTCTCCTCCCTC+CGG + chr8_4:53254946-53254965 Msa1333220:intron 45.0%
TTATATTTCAGACCGGAGGG+AGG - chr8_4:53254961-53254980 None:intergenic 45.0%
!! TTGAGAGAGGTGTTGGAAGT+AGG + chr8_4:53255795-53255814 Msa1333220:CDS 45.0%
AGGTTCTGCTACTGCTCATT+TGG + chr8_4:53255851-53255870 Msa1333220:CDS 45.0%
! CTTGACATGATGAGGCATCT+TGG + chr8_4:53256008-53256027 Msa1333220:CDS 45.0%
ATGATCTGCTGCTGATACCT+TGG - chr8_4:53256041-53256060 None:intergenic 45.0%
GGATACATGGTTGAGAAGTC+AGG + chr8_4:53256181-53256200 Msa1333220:CDS 45.0%
TCCCATACTTGCGGAATTAG+TGG + chr8_4:53256268-53256287 Msa1333220:CDS 45.0%
AGAAGCTCTTGAAGGATGGT+CGG + chr8_4:53256339-53256358 Msa1333220:CDS 45.0%
GGAGATAATGCATTGGAAGC+TGG + chr8_4:53256419-53256438 Msa1333220:CDS 45.0%
! ATGGATAGGTTAGCTGTTGG+TGG + chr8_4:53256626-53256645 Msa1333220:CDS 45.0%
! TAGGTTAGCTGTTGGTGGAA+TGG + chr8_4:53256631-53256650 Msa1333220:CDS 45.0%
! TGGTCTTACTAATCCAGAGG+AGG + chr8_4:53256676-53256695 Msa1333220:CDS 45.0%
GCGTTTAAAGACCATCATGC+TGG + chr8_4:53256872-53256891 Msa1333220:CDS 45.0%
TTTCGCCTTCTCGACAAGAA+CGG + chr8_4:53256981-53257000 Msa1333220:CDS 45.0%
TTCTCGACAAGAACGGAGAT+GGG + chr8_4:53256988-53257007 Msa1333220:CDS 45.0%
GGAACTTACAGAGGTGATAG+AGG + chr8_4:53257025-53257044 Msa1333220:CDS 45.0%
ATGTCATGTGCATCTTCTCC+TGG - chr8_4:53257062-53257081 None:intergenic 45.0%
! CTTCTTGACTCGAACAGTGA+TGG + chr8_4:53257089-53257108 Msa1333220:CDS 45.0%
GACCCTCAACCTATCCTTAA+AGG + chr8_4:53257629-53257648 Msa1333220:three_prime_UTR 45.0%
! CCCCTTTAAGGATAGGTTGA+GGG - chr8_4:53257634-53257653 None:intergenic 45.0%
CCCTCAACCTATCCTTAAAG+GGG + chr8_4:53257631-53257650 Msa1333220:three_prime_UTR 45.0%
CCTCAACCTATCCTTAAAGG+GGG + chr8_4:53257632-53257651 Msa1333220:three_prime_UTR 45.0%
AGCCAGAACCGTTTGTAAAG+AGG + chr8_4:53257670-53257689 Msa1333220:three_prime_UTR 45.0%
AGAAGAGTGAGAGTAAGCGG+TGG - chr8_4:53254503-53254522 None:intergenic 50.0%
ACTTCTACAGCACACGCTCT+CGG - chr8_4:53254570-53254589 None:intergenic 50.0%
ATCACCATCTTTCCTCCACC+GGG - chr8_4:53254594-53254613 None:intergenic 50.0%
AGCTCTCCTCTTACTCCTGA+TGG + chr8_4:53254723-53254742 Msa1333220:CDS 50.0%
! ATCAGCGAGAAGCATGGCAA+TGG - chr8_4:53254775-53254794 None:intergenic 50.0%
CTGAAGATCAGCGAGAAGCA+TGG - chr8_4:53254781-53254800 None:intergenic 50.0%
CATGCTTCTCGCTGATCTTC+AGG + chr8_4:53254779-53254798 Msa1333220:CDS 50.0%
TGAGACCGGAGGGAATATTG+TGG + chr8_4:53255129-53255148 Msa1333220:intron 50.0%
TCTGCTGCTGATACCTTGGA+AGG - chr8_4:53256037-53256056 None:intergenic 50.0%
ATTCCCACAGCATGAGCAAG+AGG - chr8_4:53256092-53256111 None:intergenic 50.0%
TGGTTGAGAAGTCAGGAGAC+AGG + chr8_4:53256188-53256207 Msa1333220:CDS 50.0%
TTGAGAAGTCAGGAGACAGG+TGG + chr8_4:53256191-53256210 Msa1333220:CDS 50.0%
! GTGGTGTTGAACCCTAAGTC+TGG + chr8_4:53256398-53256417 Msa1333220:CDS 50.0%
ATTGCCAGGCCAAAAGGGAA+TGG + chr8_4:53256518-53256537 Msa1333220:CDS 50.0%
! GTATCCATTCCCTTTTGGCC+TGG - chr8_4:53256525-53256544 None:intergenic 50.0%
!! GGCTGGTCTTACTAATCCAG+AGG + chr8_4:53256673-53256692 Msa1333220:CDS 50.0%
CATCTCCGTTCTTGTCGAGA+AGG - chr8_4:53256989-53257008 None:intergenic 50.0%
CTTCTCGACAAGAACGGAGA+TGG + chr8_4:53256987-53257006 Msa1333220:CDS 50.0%
ACAGAGGTGATAGAGGAGCT+TGG + chr8_4:53257032-53257051 Msa1333220:CDS 50.0%
! CCCCCTTTAAGGATAGGTTG+AGG - chr8_4:53257635-53257654 None:intergenic 50.0%
! AGAAGAGAATGGTGGCGCGT+GGG - chr8_4:53254459-53254478 None:intergenic 55.0%
TAAGCGGTGGTGAGTGGTAG+TGG - chr8_4:53254490-53254509 None:intergenic 55.0%
TGAGAGTAAGCGGTGGTGAG+TGG - chr8_4:53254496-53254515 None:intergenic 55.0%
GCGTGTGCTGTAGAAGTTCC+CGG + chr8_4:53254573-53254592 Msa1333220:CDS 55.0%
TGTGCTGTAGAAGTTCCCGG+TGG + chr8_4:53254576-53254595 Msa1333220:CDS 55.0%
AGTTCCCGGTGGAGGAAAGA+TGG + chr8_4:53254587-53254606 Msa1333220:CDS 55.0%
GAGCGACCATCAGGAGTAAG+AGG - chr8_4:53254732-53254751 None:intergenic 55.0%
GAAAGAGGAGAGCGACCATC+AGG - chr8_4:53254741-53254760 None:intergenic 55.0%
GGCATCTTGGTCACCTTCCA+AGG + chr8_4:53256021-53256040 Msa1333220:CDS 55.0%
TGCTCCTCTTGCTCATGCTG+TGG + chr8_4:53256085-53256104 Msa1333220:CDS 55.0%
GCTCCTCTTGCTCATGCTGT+GGG + chr8_4:53256086-53256105 Msa1333220:CDS 55.0%
TGATGTGCTTGGACTGCGAG+TGG + chr8_4:53256379-53256398 Msa1333220:CDS 55.0%
! TGGAGAGAGAGCGTGCTACA+GGG + chr8_4:53256439-53256458 Msa1333220:CDS 55.0%
TGGGAGGACTAGACCCTTGA+TGG + chr8_4:53256580-53256599 Msa1333220:CDS 55.0%
TTCAGCTGCAGCCAGCATGA+TGG - chr8_4:53256886-53256905 None:intergenic 55.0%
!! ATAGAGGAGCTTGGTGCACC+AGG + chr8_4:53257041-53257060 Msa1333220:CDS 55.0%
! ATGGTGGCGCGTGGGGTAAT+CGG - chr8_4:53254451-53254470 None:intergenic 60.0%
! GAAGAGAATGGTGGCGCGTG+GGG - chr8_4:53254458-53254477 None:intergenic 60.0%
! GAGAAGAGAATGGTGGCGCG+TGG - chr8_4:53254460-53254479 None:intergenic 60.0%
TACAGCACACGCTCTCGGAG+TGG - chr8_4:53254565-53254584 None:intergenic 60.0%
GCTGTAGAAGTTCCCGGTGG+AGG + chr8_4:53254579-53254598 Msa1333220:CDS 60.0%
! CTGGAGAGAGAGCGTGCTAC+AGG + chr8_4:53256438-53256457 Msa1333220:CDS 60.0%
! CATGCTGGCTGCAGCTGAAC+TGG + chr8_4:53256887-53256906 Msa1333220:CDS 60.0%
GCGTGGGGTAATCGGAAGCG+TGG - chr8_4:53254443-53254462 None:intergenic 65.0%
ACGCTCTCGGAGTGGACCAC+CGG - chr8_4:53254557-53254576 None:intergenic 65.0%
TGACGCGGGTGGGTCGAGTG+GGG - chr8_4:53254527-53254546 None:intergenic 70.0%
GTGACGCGGGTGGGTCGAGT+GGG - chr8_4:53254528-53254547 None:intergenic 70.0%
ACTCGACCCACCCGCGTCAC+CGG + chr8_4:53254528-53254547 Msa1333220:CDS 70.0%
ACCACCGGAGACCGGTGACG+CGG - chr8_4:53254542-53254561 None:intergenic 70.0%
CGGAGTGGACCACCGGAGAC+CGG - chr8_4:53254550-53254569 None:intergenic 70.0%
GGTGACGCGGGTGGGTCGAG+TGG - chr8_4:53254529-53254548 None:intergenic 75.0%
CGGAGACCGGTGACGCGGGT+GGG - chr8_4:53254537-53254556 None:intergenic 75.0%
CCACCCGCGTCACCGGTCTC+CGG + chr8_4:53254535-53254554 Msa1333220:CDS 75.0%
CCACCGGAGACCGGTGACGC+GGG - chr8_4:53254541-53254560 None:intergenic 75.0%
! CCGGAGACCGGTGACGCGGG+TGG - chr8_4:53254538-53254557 None:intergenic 80.0%
! CCCGCGTCACCGGTCTCCGG+TGG + chr8_4:53254538-53254557 Msa1333220:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53254246 53257747 53254246 ID=Msa1333220;Name=Msa1333220
chr8_4 mRNA 53254246 53257747 53254246 ID=Msa1333220-mRNA-1;Parent=Msa1333220;Name=Msa1333220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=81|1|1|1|1|1|4|234|608
chr8_4 exon 53254246 53254800 53254246 ID=Msa1333220-mRNA-1:exon:16255;Parent=Msa1333220-mRNA-1
chr8_4 exon 53255765 53256697 53255765 ID=Msa1333220-mRNA-1:exon:16256;Parent=Msa1333220-mRNA-1
chr8_4 exon 53256867 53257151 53256867 ID=Msa1333220-mRNA-1:exon:16257;Parent=Msa1333220-mRNA-1
chr8_4 exon 53257379 53257747 53257379 ID=Msa1333220-mRNA-1:exon:16258;Parent=Msa1333220-mRNA-1
chr8_4 five_prime_UTR 53254246 53254326 53254246 ID=Msa1333220-mRNA-1:five_prime_utr;Parent=Msa1333220-mRNA-1
chr8_4 CDS 53254327 53254800 53254327 ID=Msa1333220-mRNA-1:cds;Parent=Msa1333220-mRNA-1
chr8_4 CDS 53255765 53256697 53255765 ID=Msa1333220-mRNA-1:cds;Parent=Msa1333220-mRNA-1
chr8_4 CDS 53256867 53257151 53256867 ID=Msa1333220-mRNA-1:cds;Parent=Msa1333220-mRNA-1
chr8_4 CDS 53257379 53257513 53257379 ID=Msa1333220-mRNA-1:cds;Parent=Msa1333220-mRNA-1
chr8_4 three_prime_UTR 53257514 53257747 53257514 ID=Msa1333220-mRNA-1:three_prime_utr;Parent=Msa1333220-mRNA-1
Gene Sequence

>Msa1333220

ATGAAGTTTCATCCACAATATTGGTGTTGTGTTTCTTTGTCACAACCAACAACATTACATTACATTCATAGATGTCAACTACGCATTGAACCAAAAATGGAACTCTTACACTTCCACGCTTCCGATTACCCCACGCGCCACCATTCTCTTCTCAAACAAACCACTACCACTCACCACCGCTTACTCTCACTCTTCTTCCCCACTCGACCCACCCGCGTCACCGGTCTCCGGTGGTCCACTCCGAGAGCGTGTGCTGTAGAAGTTCCCGGTGGAGGAAAGATGGTGATAGAGCTTGTCGGTGCTTTCAATGATTTGACTGAGAGGATGAAGGTGTTATCCACAAGTTCCTCTGGTCTTCTTTTCAAATCATTGAAACTCTCCATTCCTGTTCTTCAAAGCTCTCCTCTTACTCCTGATGGTCGCTCTCCTCTTTCCAAAGCTTTATCCATTGCCATGCTTCTCGCTGATCTTCAGATGGATGCAGAAGTTATATCTGCTGGAATATTGAGAGAGGTGTTGGAAGTAGGTGAGTTAAATCTACATGAAGTTCGAAGTCAGATAGGTTCTGCTACTGCTCATTTGGTGCACGAGAGTTTGCGTGTTAAGAACTTTGCATCTAGAGTAGACATTCTGGATGAAGAGAATGCTGCTGCTTTGAGAAAGTTCTGTCTCACTTACTATGACATTAGAGCTTTGATTTTGGACTTGGCTTTGAAGCTTGACATGATGAGGCATCTTGGTCACCTTCCAAGGTATCAGCAGCAGATCATTTCTCTGCAAGTTATGAAAATATATGCTCCTCTTGCTCATGCTGTGGGAATTAACTACATATCACTTGAATTGGAAGATCTCTCGTTTCAGTATTTGTTTCCTTATTCATATCTTTATGTGGATACATGGTTGAGAAGTCAGGAGACAGGTGGTATATCTCTTATCGATGTATACAAAGATGAATTGCTTCAGTCACTAAAATCTGATCCCATACTTGCGGAATTAGTGGATGATATCTCAGTTAAAGGTCGTTATAAAAGTCGTTACAGCACAATGAAGAAGCTCTTGAAGGATGGTCGGAGACCAGAAGATGTAAATGATGTGCTTGGACTGCGAGTGGTGTTGAACCCTAAGTCTGGAGATAATGCATTGGAAGCTGGAGAGAGAGCGTGCTACAGGGCTCATCAAATCATCCAATCTATGTGGAAAGAAATCCCTTCTCGGACTAAAGATTATATTGCCAGGCCAAAAGGGAATGGATACAAAAGTTTGCATATGGCAGTGGATGTAAGTGAAATTGGGAGGACTAGACCCTTGATGGAAATACAGATAAGAACTACTGAAATGGATAGGTTAGCTGTTGGTGGAATGGCATCTCATTCATTATACAAGGCTGGTCTTACTAATCCAGAGGAGGCAAAGCGTTTAAAGACCATCATGCTGGCTGCAGCTGAACTGGCTGCTTTGCGCCTTAAAGATTTTCCAAGTGCAAATCATAAAGGGATTGAATTTGATCAGAGAGATAGAGTATTTCGCCTTCTCGACAAGAACGGAGATGGGAAGATAAGCATTGAGGAACTTACAGAGGTGATAGAGGAGCTTGGTGCACCAGGAGAAGATGCACATGACATGATGCTGCTTCTTGACTCGAACAGTGATGGCTCCCTCAGCTCTGATGAATTTCAGATGTTCCAAAAACAGGTCGAGATGGTTCGTAATTTAGAGGACAGAGATGATGAATACAAGAAAATATTGGATGAGAAACTTCATATGGCAGATGATAGTGGTTTAATTCAGGTATATAATAAGGAGTTTGGCAACAGGCTTGTGAGCTAG

Protein sequence

>Msa1333220

MKFHPQYWCCVSLSQPTTLHYIHRCQLRIEPKMELLHFHASDYPTRHHSLLKQTTTTHHRLLSLFFPTRPTRVTGLRWSTPRACAVEVPGGGKMVIELVGAFNDLTERMKVLSTSSSGLLFKSLKLSIPVLQSSPLTPDGRSPLSKALSIAMLLADLQMDAEVISAGILREVLEVGELNLHEVRSQIGSATAHLVHESLRVKNFASRVDILDEENAAALRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAPLAHAVGINYISLELEDLSFQYLFPYSYLYVDTWLRSQETGGISLIDVYKDELLQSLKSDPILAELVDDISVKGRYKSRYSTMKKLLKDGRRPEDVNDVLGLRVVLNPKSGDNALEAGERACYRAHQIIQSMWKEIPSRTKDYIARPKGNGYKSLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYKAGLTNPEEAKRLKTIMLAAAELAALRLKDFPSANHKGIEFDQRDRVFRLLDKNGDGKISIEELTEVIEELGAPGEDAHDMMLLLDSNSDGSLSSDEFQMFQKQVEMVRNLEDRDDEYKKILDEKLHMADDSGLIQVYNKEFGNRLVS*