Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367830 | XP_003600643.1 | 98.812 | 842 | 10 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1739 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367830 | sp|Q9FX32|SUS6_ARATH | 69.779 | 814 | 243 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367830 | G7J800 | 98.812 | 842 | 10 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1739 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102870 | Msa0367830 | 0.804167 | 2.460485e-49 | -8.615850e-47 |
| Msa0367830 | Msa0415610 | 0.819589 | 1.073121e-52 | -8.615850e-47 |
| Msa0367830 | Msa0460630 | 0.829615 | 4.661769e-55 | -8.615850e-47 |
| Msa0367830 | Msa0465400 | 0.808253 | 3.391890e-50 | -8.615850e-47 |
| Msa0367830 | Msa0616510 | 0.824297 | 8.709705e-54 | -8.615850e-47 |
| Msa0367830 | Msa0699840 | 0.836800 | 7.567976e-57 | -8.615850e-47 |
| Msa0367830 | Msa1150820 | 0.816078 | 6.656970e-52 | -8.615850e-47 |
| Msa0367830 | Msa1184330 | 0.831496 | 1.615335e-55 | -8.615850e-47 |
| Msa0367830 | Msa1227940 | 0.832105 | 1.142638e-55 | -8.615850e-47 |
| Msa0367830 | Msa1271040 | 0.809493 | 1.841241e-50 | -8.615850e-47 |
| Msa0367830 | Msa1284120 | 0.815756 | 7.855336e-52 | -8.615850e-47 |
| Msa0367830 | Msa1341890 | 0.827638 | 1.400472e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367830 | MtrunA17_Chr3g0109841 | 98.812 | 842 | 10 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1739 |
| Msa0367830 | MtrunA17_Chr5g0433761 | 82.122 | 839 | 144 | 3 | 1 | 838 | 1 | 834 | 0.0 | 1455 |
| Msa0367830 | MtrunA17_Chr6g0481131 | 70.833 | 816 | 238 | 0 | 19 | 834 | 18 | 833 | 0.0 | 1236 |
| Msa0367830 | MtrunA17_Chr6g0481171 | 72.766 | 705 | 188 | 1 | 134 | 834 | 5 | 709 | 0.0 | 1083 |
| Msa0367830 | MtrunA17_Chr1g0195241 | 57.772 | 772 | 325 | 1 | 37 | 808 | 16 | 786 | 0.0 | 938 |
| Msa0367830 | MtrunA17_Chr7g0269581 | 55.037 | 814 | 359 | 3 | 1 | 814 | 1 | 807 | 0.0 | 932 |
| Msa0367830 | MtrunA17_Chr2g0301621 | 55.799 | 776 | 335 | 6 | 41 | 814 | 35 | 804 | 0.0 | 926 |
| Msa0367830 | MtrunA17_Chr4g0070011 | 56.331 | 774 | 332 | 4 | 41 | 813 | 37 | 805 | 0.0 | 924 |
| Msa0367830 | MtrunA17_Chr6g0481241 | 64.130 | 184 | 44 | 1 | 639 | 822 | 1 | 162 | 1.28e-75 | 246 |
| Msa0367830 | MtrunA17_Chr6g0481261 | 83.333 | 102 | 17 | 0 | 639 | 740 | 1 | 102 | 7.19e-56 | 187 |
| Msa0367830 | MtrunA17_Chr5g0443091 | 27.207 | 555 | 320 | 21 | 286 | 787 | 171 | 694 | 1.42e-40 | 161 |
| Msa0367830 | MtrunA17_Chr4g0064501 | 27.491 | 542 | 311 | 20 | 286 | 779 | 168 | 675 | 1.82e-39 | 158 |
| Msa0367830 | MtrunA17_Chr3g0096241 | 26.296 | 521 | 325 | 17 | 286 | 769 | 167 | 665 | 1.95e-38 | 154 |
| Msa0367830 | MtrunA17_Chr6g0481151 | 78.082 | 73 | 16 | 0 | 569 | 641 | 24 | 96 | 1.07e-32 | 122 |
| Msa0367830 | MtrunA17_Chr4g0009181 | 66.234 | 77 | 23 | 2 | 1 | 76 | 3 | 77 | 6.58e-25 | 99.0 |
| Msa0367830 | MtrunA17_Chr6g0481161 | 86.364 | 44 | 6 | 0 | 691 | 734 | 1 | 44 | 9.97e-22 | 89.0 |
| Msa0367830 | MtrunA17_Chr6g0481271 | 45.455 | 66 | 34 | 1 | 771 | 834 | 1 | 66 | 1.35e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367830 | AT1G73370.3 | 69.779 | 814 | 243 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1220 |
| Msa0367830 | AT1G73370.1 | 69.779 | 814 | 243 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1220 |
| Msa0367830 | AT5G37180.1 | 71.159 | 794 | 224 | 2 | 21 | 813 | 13 | 802 | 0.0 | 1206 |
| Msa0367830 | AT1G73370.2 | 71.039 | 770 | 223 | 0 | 46 | 815 | 1 | 770 | 0.0 | 1176 |
| Msa0367830 | AT5G37180.2 | 74.919 | 614 | 154 | 0 | 200 | 813 | 1 | 614 | 0.0 | 994 |
| Msa0367830 | AT4G02280.1 | 56.999 | 793 | 340 | 1 | 22 | 814 | 18 | 809 | 0.0 | 966 |
| Msa0367830 | AT5G49190.1 | 54.981 | 793 | 356 | 1 | 22 | 814 | 15 | 806 | 0.0 | 926 |
| Msa0367830 | AT5G49190.2 | 55.513 | 780 | 346 | 1 | 35 | 814 | 18 | 796 | 0.0 | 923 |
| Msa0367830 | AT3G43190.2 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 919 |
| Msa0367830 | AT3G43190.1 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 919 |
| Msa0367830 | AT5G37180.3 | 76.439 | 556 | 131 | 0 | 258 | 813 | 1 | 556 | 0.0 | 917 |
| Msa0367830 | AT5G20830.3 | 56.645 | 775 | 330 | 4 | 41 | 814 | 39 | 808 | 0.0 | 913 |
| Msa0367830 | AT5G20830.2 | 56.645 | 775 | 330 | 4 | 41 | 814 | 39 | 808 | 0.0 | 913 |
| Msa0367830 | AT5G20830.1 | 56.645 | 775 | 330 | 4 | 41 | 814 | 39 | 808 | 0.0 | 913 |
| Msa0367830 | AT5G49190.3 | 57.510 | 739 | 313 | 1 | 76 | 814 | 3 | 740 | 0.0 | 910 |
| Msa0367830 | AT5G11110.1 | 28.037 | 535 | 321 | 18 | 286 | 784 | 177 | 683 | 1.07e-38 | 156 |
| Msa0367830 | AT1G04920.1 | 27.273 | 550 | 327 | 21 | 286 | 790 | 172 | 693 | 1.47e-38 | 155 |
| Msa0367830 | AT5G20280.1 | 26.679 | 536 | 340 | 18 | 286 | 786 | 170 | 687 | 1.30e-37 | 152 |
| Msa0367830 | AT4G10120.4 | 27.099 | 524 | 313 | 18 | 286 | 770 | 23 | 516 | 2.55e-36 | 148 |
| Msa0367830 | AT4G10120.2 | 26.806 | 526 | 312 | 19 | 286 | 770 | 197 | 690 | 4.29e-36 | 147 |
| Msa0367830 | AT4G10120.3 | 26.806 | 526 | 312 | 19 | 286 | 770 | 197 | 690 | 4.29e-36 | 147 |
| Msa0367830 | AT4G10120.1 | 26.806 | 526 | 312 | 19 | 286 | 770 | 197 | 690 | 4.29e-36 | 147 |
| Msa0367830 | AT4G10120.5 | 26.640 | 503 | 302 | 16 | 305 | 770 | 17 | 489 | 9.35e-35 | 143 |
Find 177 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCTTATGTTTAAGAATT+TGG | 0.104517 | 3_1:-63739044 | Msa0367830:intron |
| TGCAAACAAGTTGCTGAATA+TGG | 0.128055 | 3_1:-63739143 | Msa0367830:CDS |
| TTCTCTATTCATGGTTATTT+TGG | 0.154276 | 3_1:-63741736 | Msa0367830:CDS |
| ATTACTGTTGATGGTGTTTC+TGG | 0.165228 | 3_1:-63739416 | Msa0367830:CDS |
| AATGCACTTGAAGCAGATTT+TGG | 0.198635 | 3_1:-63742661 | Msa0367830:CDS |
| CTTGCCATTGAGAAGATTAT+AGG | 0.209492 | 3_1:+63739806 | None:intergenic |
| TATCTTTGCTTTGCCACTTT+TGG | 0.224921 | 3_1:+63739082 | None:intergenic |
| GGACTATGCAGAGTTGTTTC+AGG | 0.262656 | 3_1:-63740101 | Msa0367830:CDS |
| AATTTCATGGCTTCTGCATC+AGG | 0.265392 | 3_1:-63743588 | Msa0367830:exon |
| AGGTAATCGGTTGATGTTAT+AGG | 0.265521 | 3_1:+63742849 | None:intergenic |
| ATACAATATCTTCAATTTCA+TGG | 0.271570 | 3_1:-63743601 | Msa0367830:exon |
| AAATTACACTGATGGAAATT+TGG | 0.274664 | 3_1:-63740703 | Msa0367830:CDS |
| ATATTTGATTCCTATCATTC+TGG | 0.280201 | 3_1:+63743400 | None:intergenic |
| TTAAAATTGCCTTCTTCAAT+TGG | 0.283903 | 3_1:-63742613 | Msa0367830:CDS |
| AATTGAAAGGTCAATTTAGA+TGG | 0.289817 | 3_1:-63739610 | Msa0367830:CDS |
| ATTGTGATCTTCTCTATTCA+TGG | 0.289854 | 3_1:-63741745 | Msa0367830:CDS |
| TTAAGAACTTTGAAACAAAA+TGG | 0.290010 | 3_1:+63742581 | None:intergenic |
| CCTTGGTTCAAAATCATCAT+AGG | 0.298372 | 3_1:+63741990 | None:intergenic |
| TAAGGCCAGACCCTGGAGTA+TGG | 0.305573 | 3_1:-63742911 | Msa0367830:CDS |
| CAAATATTGGAAGGCAATCT+TGG | 0.312412 | 3_1:-63743384 | Msa0367830:CDS |
| GTTACCTGTCCGCCGGTATC+TGG | 0.321700 | 3_1:+63741691 | None:intergenic |
| AAATTTGGCAGCTTCTCTTA+TGG | 0.323319 | 3_1:-63740688 | Msa0367830:CDS |
| TTGCCTTCTTCAATTGGAAA+TGG | 0.328203 | 3_1:-63742607 | Msa0367830:CDS |
| GGAAAACCAGATCTCATTAT+AGG | 0.331613 | 3_1:-63740726 | Msa0367830:CDS |
| TTCCAATTCCTGATTGCATT+TGG | 0.342271 | 3_1:+63741052 | None:intergenic |
| TTCCTTGAATTTGAGGTAAT+CGG | 0.343680 | 3_1:+63742836 | None:intergenic |
| TGAACAGGTAGTTTACATAT+TGG | 0.345797 | 3_1:-63741287 | Msa0367830:intron |
| TTCTCCATGTTCATTGGGTC+TGG | 0.347997 | 3_1:+63741799 | None:intergenic |
| CCTGCTTTGTATGAAGCATT+TGG | 0.348320 | 3_1:-63739509 | Msa0367830:CDS |
| ATATTCTTTCCTTGAATTTG+AGG | 0.349412 | 3_1:+63742829 | None:intergenic |
| CATTTGGTTCCTTGAGCATC+AGG | 0.353289 | 3_1:+63741068 | None:intergenic |
| TATAGTAAGTCTTCAATTGT+AGG | 0.354179 | 3_1:+63739975 | None:intergenic |
| GGGAAGAGATGGCAGAAATA+AGG | 0.363666 | 3_1:-63739661 | Msa0367830:CDS |
| TTTGCTACTGCAGGCGTTCA+AGG | 0.369565 | 3_1:-63738699 | Msa0367830:intron |
| AACCAAATGCAATCAGGAAT+TGG | 0.378445 | 3_1:-63741054 | Msa0367830:CDS |
| AGAAATGGAGCAAGTTATAA+AGG | 0.380139 | 3_1:-63743424 | Msa0367830:CDS |
| CAATTGTATCGGCCATGAAT+TGG | 0.380384 | 3_1:+63740423 | None:intergenic |
| TCATGATTTGATGGAAGAAA+TGG | 0.387496 | 3_1:-63743439 | Msa0367830:CDS |
| GAATGATAGGAATCAAATAT+TGG | 0.388211 | 3_1:-63743397 | Msa0367830:CDS |
| TCACCAAATTCTTAAACATA+AGG | 0.390237 | 3_1:+63739041 | None:intergenic |
| CTCTTGTCTTTCTCAGTGTA+AGG | 0.390279 | 3_1:+63740014 | None:intergenic |
| CATCATAACCAGCACATATC+AGG | 0.395020 | 3_1:-63740381 | Msa0367830:CDS |
| ATCCTTTGAAATCAAAAGAC+AGG | 0.397721 | 3_1:-63739682 | Msa0367830:CDS |
| GGTTGTTGAGGTTCATCAAT+TGG | 0.407027 | 3_1:+63738930 | None:intergenic |
| GTGAACCTTGTCATAGTTGG+AGG | 0.408099 | 3_1:-63739713 | Msa0367830:CDS |
| CATAAAAGTTCATGATTTGA+TGG | 0.411962 | 3_1:-63743448 | Msa0367830:CDS |
| TGGCAAAGCAAAGATACATT+TGG | 0.414762 | 3_1:-63739075 | Msa0367830:CDS |
| TCACTTCTCATGCCAATTCA+TGG | 0.415497 | 3_1:-63740435 | Msa0367830:CDS |
| TGTAAGGAAAATAGACAGTT+TGG | 0.415507 | 3_1:+63740030 | None:intergenic |
| AAAACTTCTCCATGTTCATT+GGG | 0.416460 | 3_1:+63741794 | None:intergenic |
| GATAACAAGTAGTCCAATAT+AGG | 0.417385 | 3_1:+63742523 | None:intergenic |
| TCTACCTTTCTCAAGGTACT+TGG | 0.421092 | 3_1:+63743476 | None:intergenic |
| GAGACTCTGCTGCTTGGAGT+TGG | 0.425685 | 3_1:+63738902 | None:intergenic |
| CTCCATTGAGAGGATCGATA+TGG | 0.425897 | 3_1:+63739390 | None:intergenic |
| TTATAAAGGACCAGAATGAT+AGG | 0.436409 | 3_1:-63743410 | Msa0367830:CDS |
| GCGTTCAAGGTCCAGATCAC+AGG | 0.438873 | 3_1:-63738686 | Msa0367830:CDS |
| GCAGCTTTGCAACTGAGCTC+AGG | 0.439257 | 3_1:+63742067 | None:intergenic |
| AGCACATATCAGGAAATTGC+TGG | 0.441509 | 3_1:-63740371 | Msa0367830:CDS |
| TGGCATGAGAAGTGATACTT+AGG | 0.443770 | 3_1:+63740443 | None:intergenic |
| AGCAATTTCCTGATATGTGC+TGG | 0.445998 | 3_1:+63740373 | None:intergenic |
| CTACTCTGCTTGGATGCATC+TGG | 0.446134 | 3_1:+63743522 | None:intergenic |
| TAATTTCCTATAATGAGATC+TGG | 0.449484 | 3_1:+63740720 | None:intergenic |
| AAACATACCACAAGAATTTG+AGG | 0.450197 | 3_1:+63741199 | None:intergenic |
| ATTGGATCAAGTGAGAGCTT+TGG | 0.450839 | 3_1:-63741269 | Msa0367830:CDS |
| ATAAAGGAATCCTGCGTCAA+TGG | 0.454020 | 3_1:-63740977 | Msa0367830:CDS |
| CTCTTATGGCTAGCAAACTT+AGG | 0.458904 | 3_1:-63740674 | Msa0367830:CDS |
| TTTGGTCAAGCAGATGTCCT+TGG | 0.461051 | 3_1:-63741718 | Msa0367830:CDS |
| CATATGTTGCCTTTGCAGTA+AGG | 0.461366 | 3_1:-63742929 | Msa0367830:CDS |
| GCCATACCATTCGACTAAAC+CGG | 0.464737 | 3_1:+63739760 | None:intergenic |
| GCATGGCTTTCATATTGTCC+AGG | 0.464964 | 3_1:+63740140 | None:intergenic |
| TTGATCTTAACCCTGTGATC+TGG | 0.465172 | 3_1:+63738675 | None:intergenic |
| CTCTCCGTTGCGATGTCTAT+CGG | 0.469091 | 3_1:+63739574 | None:intergenic |
| CCAGCGGAAATTACTGTTGA+TGG | 0.471975 | 3_1:-63739425 | Msa0367830:CDS |
| GCAAACAAGTTGCTGAATAT+GGG | 0.473370 | 3_1:-63739142 | Msa0367830:CDS |
| TATTCATAGGTTTAAGCAGT+GGG | 0.474049 | 3_1:-63741899 | Msa0367830:intron |
| TTGGTGAACCTTGTCATAGT+TGG | 0.474389 | 3_1:-63739716 | Msa0367830:CDS |
| GTCCTTGGCTTGCCAGATAC+CGG | 0.475078 | 3_1:-63741703 | Msa0367830:CDS |
| TCAAGGAACCAAATGCAATC+AGG | 0.478957 | 3_1:-63741060 | Msa0367830:CDS |
| GATGTTGTGAAGAACATAAC+CGG | 0.480452 | 3_1:-63739779 | Msa0367830:CDS |
| CGATTCATTGCCGACACAAA+GGG | 0.480861 | 3_1:-63739545 | Msa0367830:CDS |
| AACCGATTACCTCAAATTCA+AGG | 0.481703 | 3_1:-63742838 | Msa0367830:CDS |
| TAAAGGAATCCTGCGTCAAT+GGG | 0.485877 | 3_1:-63740976 | Msa0367830:CDS |
| TATTCCCATACTCCAGGGTC+TGG | 0.487595 | 3_1:+63742906 | None:intergenic |
| TGCTGCTTGGAGTTGGACAC+TGG | 0.491085 | 3_1:+63738909 | None:intergenic |
| TTCCATATCGATCCTCTCAA+TGG | 0.492417 | 3_1:-63739392 | Msa0367830:CDS |
| AAAACCTATAATCTTCTCAA+TGG | 0.494217 | 3_1:-63739810 | Msa0367830:CDS |
| ATTCCTTTATCCGTCTGAAA+AGG | 0.495407 | 3_1:+63740990 | None:intergenic |
| ATTGAAAAGTATCAATTGAA+AGG | 0.496086 | 3_1:-63739623 | Msa0367830:CDS |
| GACTATGCAGAGTTGTTTCA+GGG | 0.497122 | 3_1:-63740100 | Msa0367830:CDS |
| TTTACATATTCCCATACTCC+AGG | 0.498127 | 3_1:+63742900 | None:intergenic |
| GAACAAAAGGTTGAGAAGCT+TGG | 0.499509 | 3_1:-63739735 | Msa0367830:CDS |
| GAAACAACTCTGCATAGTCC+TGG | 0.499572 | 3_1:+63740104 | None:intergenic |
| AGTACCTTGAGAAAGGTAGA+AGG | 0.502369 | 3_1:-63743473 | Msa0367830:CDS |
| ATCACAATATTGAATATTGT+AGG | 0.502821 | 3_1:+63741760 | None:intergenic |
| GAGTGCTTGGTGTCAAGGAT+TGG | 0.503252 | 3_1:+63741029 | None:intergenic |
| AATGGTATGGCAAGAACAAA+AGG | 0.505067 | 3_1:-63739748 | Msa0367830:CDS |
| ATCAAAAGACAGGGAAGAGA+TGG | 0.512632 | 3_1:-63739672 | Msa0367830:CDS |
| CTTACTGCAAAGGCAACATA+TGG | 0.514465 | 3_1:+63742930 | None:intergenic |
| CTCAGTTGCAAAGCTGCAGA+TGG | 0.515631 | 3_1:-63742061 | Msa0367830:CDS |
| TCATCATAGGGAGTATCCAC+TGG | 0.521258 | 3_1:+63742003 | None:intergenic |
| CAGCAGAGTCTCAGAAAACA+AGG | 0.523143 | 3_1:-63738891 | Msa0367830:CDS |
| TTTGCCAAGTACCTTGAGAA+AGG | 0.524246 | 3_1:-63743480 | Msa0367830:CDS |
| CTTGCCAGATACCGGCGGAC+AGG | 0.524415 | 3_1:-63741695 | Msa0367830:intron |
| TGCATTCATTGCAATTGTAT+CGG | 0.531501 | 3_1:+63740412 | None:intergenic |
| AGTCCATTTCCAATTGAAGA+AGG | 0.532379 | 3_1:+63742604 | None:intergenic |
| AGTGAATAATGAACCAAAAG+TGG | 0.533551 | 3_1:-63739095 | Msa0367830:CDS |
| CTTGGTTCAAAATCATCATA+GGG | 0.534597 | 3_1:+63741991 | None:intergenic |
| AACTAAGATTCTCAACCTCA+TGG | 0.538311 | 3_1:-63740751 | Msa0367830:CDS |
| TGATCCTTCTACCTTTCTCA+AGG | 0.540900 | 3_1:+63743469 | None:intergenic |
| ATTTCATGGCTTCTGCATCA+GGG | 0.540993 | 3_1:-63743587 | Msa0367830:exon |
| CTTGATTCGTCTCCATTGAG+AGG | 0.541337 | 3_1:+63739380 | None:intergenic |
| AAGGCCAGACCCTGGAGTAT+GGG | 0.543424 | 3_1:-63742910 | Msa0367830:CDS |
| TGAGTAAACCTCTCAAGATA+AGG | 0.545448 | 3_1:+63740933 | None:intergenic |
| TGGAACATGATTTCAGCGGC+AGG | 0.548654 | 3_1:-63739308 | Msa0367830:CDS |
| CCAAATGCTTCATACAAAGC+AGG | 0.548728 | 3_1:+63739509 | None:intergenic |
| TTATCTTGAGAGGTTTACTC+AGG | 0.550480 | 3_1:-63740931 | Msa0367830:intron |
| ACATCTATCCTTATCTTGAG+AGG | 0.550919 | 3_1:-63740941 | Msa0367830:CDS |
| GCTGCAGATGGCTCTGACAG+TGG | 0.551693 | 3_1:-63742049 | Msa0367830:CDS |
| ATTATAGGAAATTACACTGA+TGG | 0.553471 | 3_1:-63740711 | Msa0367830:CDS |
| CAGCTTTGCAACTGAGCTCA+GGG | 0.554908 | 3_1:+63742068 | None:intergenic |
| GGTGCAGCTATGTTGAACTT+AGG | 0.558768 | 3_1:+63740062 | None:intergenic |
| GATAGGAATCAAATATTGGA+AGG | 0.559030 | 3_1:-63743393 | Msa0367830:CDS |
| CGCCGGTATCTGGCAAGCCA+AGG | 0.559948 | 3_1:+63741701 | None:intergenic |
| ATGAAGATTCAGATGTCAAG+TGG | 0.562035 | 3_1:-63740478 | Msa0367830:CDS |
| TAGACAGTTTGGTCAGCACC+AGG | 0.562574 | 3_1:+63740041 | None:intergenic |
| ACATAACCGGTTTAGTCGAA+TGG | 0.563404 | 3_1:-63739766 | Msa0367830:CDS |
| GATTGCAGCGTATTAATGAA+TGG | 0.564848 | 3_1:-63739286 | Msa0367830:intron |
| GAGTTGGACACTGGTTGTTG+AGG | 0.566263 | 3_1:+63738918 | None:intergenic |
| CATATGATACCTACTCTGCT+TGG | 0.567145 | 3_1:+63743512 | None:intergenic |
| AGCTCCAGACCCAATGAACA+TGG | 0.569952 | 3_1:-63741803 | Msa0367830:CDS |
| CTATAATCTTCTCAATGGCA+AGG | 0.572371 | 3_1:-63739805 | Msa0367830:CDS |
| AAGATTCTCAACCTCATGGA+AGG | 0.580091 | 3_1:-63740747 | Msa0367830:CDS |
| AGGGTCTGGCCTTACTGCAA+AGG | 0.580872 | 3_1:+63742920 | None:intergenic |
| CCATGGTTAGTAGCAAAAGT+TGG | 0.583413 | 3_1:+63739452 | None:intergenic |
| AAACAACTCTGCATAGTCCT+GGG | 0.585010 | 3_1:+63740105 | None:intergenic |
| AAGTTCAACATAGCTGCACC+TGG | 0.586850 | 3_1:-63740059 | Msa0367830:CDS |
| CCATCAACAGTAATTTCCGC+TGG | 0.588157 | 3_1:+63739425 | None:intergenic |
| ACCGGTTTAGTCGAATGGTA+TGG | 0.588404 | 3_1:-63739761 | Msa0367830:CDS |
| TCAGAAAACAAGGAACAAGC+AGG | 0.590337 | 3_1:-63738881 | Msa0367830:intron |
| CATGCAACATTTACACTCCC+AGG | 0.590537 | 3_1:-63740122 | Msa0367830:CDS |
| TCGATTCATTGCCGACACAA+AGG | 0.591051 | 3_1:-63739546 | Msa0367830:CDS |
| ACTGCAAAGGCAACATATGG+TGG | 0.591779 | 3_1:+63742933 | None:intergenic |
| CAGATGCATCCAAGCAGAGT+AGG | 0.592157 | 3_1:-63743521 | Msa0367830:CDS |
| TTGTTATCACTAAATCATCA+AGG | 0.594692 | 3_1:-63742508 | Msa0367830:CDS |
| GTAAGTCTTCAATTGTAGGA+TGG | 0.597900 | 3_1:+63739979 | None:intergenic |
| TTACATATTCCCATACTCCA+GGG | 0.598254 | 3_1:+63742901 | None:intergenic |
| AGTGGATGGGGAGATACTGC+AGG | 0.599037 | 3_1:-63741868 | Msa0367830:CDS |
| AGATACTGCAGGAAGAGTGA+AGG | 0.602197 | 3_1:-63741857 | Msa0367830:CDS |
| AGAGTAGGTATCATATGAAG+AGG | 0.603076 | 3_1:-63743506 | Msa0367830:CDS |
| AGCGAGAAACCCATTGACGC+AGG | 0.603079 | 3_1:+63740967 | None:intergenic |
| CGTTCAAGGTCCAGATCACA+GGG | 0.611161 | 3_1:-63738685 | Msa0367830:CDS |
| TCCTTTGAAATCAAAAGACA+GGG | 0.611362 | 3_1:-63739681 | Msa0367830:CDS |
| TTTGCAGTAAGGCCAGACCC+TGG | 0.611570 | 3_1:-63742918 | Msa0367830:CDS |
| GTAAAGTGGATTCGACACAT+TGG | 0.612673 | 3_1:-63739328 | Msa0367830:CDS |
| TAGAAATGTTACCTGTCCGC+CGG | 0.612841 | 3_1:+63741684 | None:intergenic |
| AGTGAATCCTCAAATTCTTG+TGG | 0.613261 | 3_1:-63741206 | Msa0367830:intron |
| TAGCAAACTTAGGATAACTC+AGG | 0.614245 | 3_1:-63740664 | Msa0367830:intron |
| GCTTGCAGCAAAGATAAACC+TGG | 0.616014 | 3_1:-63740158 | Msa0367830:intron |
| GGCATGAGAAGTGATACTTA+GGG | 0.616329 | 3_1:+63740444 | None:intergenic |
| TACTAACCATGGTGGTCCAG+CGG | 0.618133 | 3_1:-63739441 | Msa0367830:CDS |
| TATCCACTGGAAGTGCTGAA+AGG | 0.620301 | 3_1:+63742016 | None:intergenic |
| AGGCTCATACCTGATGCTCA+AGG | 0.620828 | 3_1:-63741077 | Msa0367830:CDS |
| CACAAAAGCTCCCTTTGTGT+CGG | 0.624836 | 3_1:+63739535 | None:intergenic |
| CTACTTAGAATTAAGCAACA+AGG | 0.635085 | 3_1:-63741235 | Msa0367830:CDS |
| CTGGGAGTGTAAATGTTGCA+TGG | 0.644191 | 3_1:+63740123 | None:intergenic |
| CATATCAGGAAATTGCTGGA+AGG | 0.653215 | 3_1:-63740367 | Msa0367830:intron |
| ATTCCTTTCAGCACTTCCAG+TGG | 0.655307 | 3_1:-63742019 | Msa0367830:CDS |
| TTATTCATAGGTTTAAGCAG+TGG | 0.659507 | 3_1:-63741900 | Msa0367830:intron |
| ACATTGGAACATGATTTCAG+CGG | 0.663048 | 3_1:-63739312 | Msa0367830:CDS |
| CTTGGCTTGCCAGATACCGG+CGG | 0.666383 | 3_1:-63741700 | Msa0367830:CDS |
| GTTGACAATGATAGGTCACA+AGG | 0.672933 | 3_1:-63741097 | Msa0367830:intron |
| ATTCATAGGTTTAAGCAGTG+GGG | 0.679591 | 3_1:-63741898 | Msa0367830:intron |
| GAGGTTGAGAATCTTAGTTG+TGG | 0.682574 | 3_1:+63740755 | None:intergenic |
| TAATTTCCGCTGGACCACCA+TGG | 0.697345 | 3_1:+63739435 | None:intergenic |
| GTCATTGAAGCAATGAACTG+TGG | 0.698242 | 3_1:-63739479 | Msa0367830:CDS |
| AGAAGCCTCCAACTATGACA+AGG | 0.698799 | 3_1:+63739708 | None:intergenic |
| CAGACCGATAGACATCGCAA+CGG | 0.751075 | 3_1:-63739578 | Msa0367830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAGAAAAATAGTAGA+TGG | - | chr3_1:63739021-63739040 | Msa0367830:intron | 15.0% |
| !!! | AAAAGTATAGTATAAGTAAA+AGG | + | chr3_1:63739368-63739387 | None:intergenic | 15.0% |
| !! | TAAACCTATGAATAAAAAAT+AGG | + | chr3_1:63740244-63740263 | None:intergenic | 15.0% |
| !!! | TTGTTTTTCTTTTAATTATG+AGG | + | chr3_1:63741813-63741832 | None:intergenic | 15.0% |
| !! | AAAATTGAAGAAACTATAAA+AGG | - | chr3_1:63741933-63741952 | Msa0367830:intron | 15.0% |
| !! | ATACAATATCTTCAATTTCA+TGG | - | chr3_1:63738548-63738567 | Msa0367830:three_prime_UTR | 20.0% |
| !! | GCAAAAAAAAAAATGCAAAT+TGG | + | chr3_1:63738829-63738848 | None:intergenic | 20.0% |
| !! | CTATAAACTAATTTACATTG+TGG | - | chr3_1:63738848-63738867 | Msa0367830:intron | 20.0% |
| !! | TTAAATAAATTTAGACAACG+TGG | + | chr3_1:63738987-63739006 | None:intergenic | 20.0% |
| !! | ATAGTATAAGTAAAAGGATA+TGG | + | chr3_1:63739362-63739381 | None:intergenic | 20.0% |
| !!! | TTAAGAACTTTGAAACAAAA+TGG | + | chr3_1:63739571-63739590 | None:intergenic | 20.0% |
| !!! | AACTTGTTCAAAAGAAAAAT+TGG | + | chr3_1:63739948-63739967 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTTTGAACAAGTT+CGG | - | chr3_1:63739948-63739967 | Msa0367830:CDS | 20.0% |
| !!! | TACTCCAATGTTTTAAAAAT+TGG | + | chr3_1:63739975-63739994 | None:intergenic | 20.0% |
| !!! | CAATCCTATTTTTTATTCAT+AGG | - | chr3_1:63740237-63740256 | Msa0367830:intron | 20.0% |
| !! | ATCACAATATTGAATATTGT+AGG | + | chr3_1:63740392-63740411 | None:intergenic | 20.0% |
| !! | CAAGTTTATTATGTATAGAA+AGG | + | chr3_1:63740996-63741015 | None:intergenic | 20.0% |
| !!! | ATTGAAAAGTATCAATTGAA+AGG | - | chr3_1:63742526-63742545 | Msa0367830:CDS | 20.0% |
| !!! | TTTCTTTGAAAAATGTAAAG+TGG | - | chr3_1:63742807-63742826 | Msa0367830:intron | 20.0% |
| !! | TAACCTTATGTTTAAGAATT+TGG | - | chr3_1:63743105-63743124 | Msa0367830:intron | 20.0% |
| !!! | AAGTTAATGTAGCTTATTTT+CGG | - | chr3_1:63743503-63743522 | Msa0367830:CDS | 20.0% |
| ! | CATAAAAGTTCATGATTTGA+TGG | - | chr3_1:63738701-63738720 | Msa0367830:intron | 25.0% |
| ! | ATATTTGATTCCTATCATTC+TGG | + | chr3_1:63738752-63738771 | None:intergenic | 25.0% |
| ! | GAATGATAGGAATCAAATAT+TGG | - | chr3_1:63738752-63738771 | Msa0367830:intron | 25.0% |
| ! | TAATTTACATTGTGGAAAGA+CGG | - | chr3_1:63738856-63738875 | Msa0367830:intron | 25.0% |
| ! | CAAATATATCTACAGCAATA+TGG | + | chr3_1:63739052-63739071 | None:intergenic | 25.0% |
| ! | CATATTGCTGTAGATATATT+TGG | - | chr3_1:63739050-63739069 | Msa0367830:CDS | 25.0% |
| ! | GTTATATGTCATTGTTTCAT+AGG | - | chr3_1:63739145-63739164 | Msa0367830:CDS | 25.0% |
| ! | ATATTCTTTCCTTGAATTTG+AGG | + | chr3_1:63739323-63739342 | None:intergenic | 25.0% |
| ! | AAAGAATATACGACCAAAAA+TGG | - | chr3_1:63739334-63739353 | Msa0367830:CDS | 25.0% |
| !! | TAAAAATTGTTGGCTAATCA+GGG | + | chr3_1:63739429-63739448 | None:intergenic | 25.0% |
| !! | TTAAAAATTGTTGGCTAATC+AGG | + | chr3_1:63739430-63739449 | None:intergenic | 25.0% |
| !!! | GATTAGCCAACAATTTTTAA+TGG | - | chr3_1:63739430-63739449 | Msa0367830:CDS | 25.0% |
| ! | AGTTAGCCATTAAAAATTGT+TGG | + | chr3_1:63739439-63739458 | None:intergenic | 25.0% |
| !! | ACAATTTTTAATGGCTAACT+TGG | - | chr3_1:63739439-63739458 | Msa0367830:CDS | 25.0% |
| !! | CAATTTTTAATGGCTAACTT+GGG | - | chr3_1:63739440-63739459 | Msa0367830:CDS | 25.0% |
| ! | TTAAAATTGCCTTCTTCAAT+TGG | - | chr3_1:63739536-63739555 | Msa0367830:CDS | 25.0% |
| !! | TTCTTAACTTTACGTTTTAG+TGG | - | chr3_1:63739584-63739603 | Msa0367830:CDS | 25.0% |
| !!! | TCTTAACTTTACGTTTTAGT+GGG | - | chr3_1:63739585-63739604 | Msa0367830:CDS | 25.0% |
| ! | TTGTTATCACTAAATCATCA+AGG | - | chr3_1:63739641-63739660 | Msa0367830:CDS | 25.0% |
| !! | GTAATTTTGTAATGCACTTT+TGG | - | chr3_1:63740004-63740023 | Msa0367830:CDS | 25.0% |
| !! | TTCTCTATTCATGGTTATTT+TGG | - | chr3_1:63740413-63740432 | Msa0367830:CDS | 25.0% |
| ! | CAGAATTAATTCTACACATT+TGG | + | chr3_1:63740555-63740574 | None:intergenic | 25.0% |
| ! | CATCTAGTTAGAATCAATTA+TGG | + | chr3_1:63740616-63740635 | None:intergenic | 25.0% |
| ! | TGAAAGTAATGTGATATGTT+TGG | + | chr3_1:63740718-63740737 | None:intergenic | 25.0% |
| ! | TATATGTTGTTGACAATGAT+AGG | - | chr3_1:63741044-63741063 | Msa0367830:CDS | 25.0% |
| ! | TAATTTCCTATAATGAGATC+TGG | + | chr3_1:63741432-63741451 | None:intergenic | 25.0% |
| ! | ATTATAGGAAATTACACTGA+TGG | - | chr3_1:63741438-63741457 | Msa0367830:intron | 25.0% |
| ! | AAATTACACTGATGGAAATT+TGG | - | chr3_1:63741446-63741465 | Msa0367830:intron | 25.0% |
| ! | GGTAACAAAAATTGTTGAAT+AGG | + | chr3_1:63741559-63741578 | None:intergenic | 25.0% |
| !! | AACAATTTTTGTTACCCTTA+AGG | - | chr3_1:63741563-63741582 | Msa0367830:intron | 25.0% |
| ! | TATAGTAAGTCTTCAATTGT+AGG | + | chr3_1:63742177-63742196 | None:intergenic | 25.0% |
| ! | TAACATCAACAACAAAAGAA+TGG | + | chr3_1:63742243-63742262 | None:intergenic | 25.0% |
| !! | TGATTAATTTTCTCTTACAG+TGG | - | chr3_1:63742298-63742317 | Msa0367830:intron | 25.0% |
| ! | AAAACCTATAATCTTCTCAA+TGG | - | chr3_1:63742339-63742358 | Msa0367830:intron | 25.0% |
| ! | AATTGAAAGGTCAATTTAGA+TGG | - | chr3_1:63742539-63742558 | Msa0367830:CDS | 25.0% |
| !!! | CTTTTGTTTTCAGTTATACA+TGG | - | chr3_1:63742975-63742994 | Msa0367830:intron | 25.0% |
| ! | TCACCAAATTCTTAAACATA+AGG | + | chr3_1:63743111-63743130 | None:intergenic | 25.0% |
| ! | TTCTTATATGTAAATGTCAC+AGG | - | chr3_1:63743179-63743198 | Msa0367830:intron | 25.0% |
| TCATGATTTGATGGAAGAAA+TGG | - | chr3_1:63738710-63738729 | Msa0367830:intron | 30.0% | |
| AGAAATGGAGCAAGTTATAA+AGG | - | chr3_1:63738725-63738744 | Msa0367830:intron | 30.0% | |
| TTATAAAGGACCAGAATGAT+AGG | - | chr3_1:63738739-63738758 | Msa0367830:intron | 30.0% | |
| GATAGGAATCAAATATTGGA+AGG | - | chr3_1:63738756-63738775 | Msa0367830:intron | 30.0% | |
| ! | CTTCTTACTAAGTTTTACAC+AGG | - | chr3_1:63738788-63738807 | Msa0367830:intron | 30.0% |
| AATTTACATTGTGGAAAGAC+GGG | - | chr3_1:63738857-63738876 | Msa0367830:intron | 30.0% | |
| GACAAAAAATACTGATAGAC+GGG | + | chr3_1:63738893-63738912 | None:intergenic | 30.0% | |
| CGACAAAAAATACTGATAGA+CGG | + | chr3_1:63738894-63738913 | None:intergenic | 30.0% | |
| TATATCTACAGCAATATGGT+CGG | + | chr3_1:63739048-63739067 | None:intergenic | 30.0% | |
| !!! | ACATTGATTTTAATGCTTGC+AGG | - | chr3_1:63739179-63739198 | Msa0367830:intron | 30.0% |
| ! | TTCCTTGAATTTGAGGTAAT+CGG | + | chr3_1:63739316-63739335 | None:intergenic | 30.0% |
| ! | AAAGGATATGGTACCATTTT+TGG | + | chr3_1:63739350-63739369 | None:intergenic | 30.0% |
| TAACTTGGGTTTATGTTGTA+GGG | - | chr3_1:63739454-63739473 | Msa0367830:CDS | 30.0% | |
| !!! | GGCAATTTTAAGTTAGGAAT+GGG | + | chr3_1:63739527-63739546 | None:intergenic | 30.0% |
| !!! | AGGCAATTTTAAGTTAGGAA+TGG | + | chr3_1:63739528-63739547 | None:intergenic | 30.0% |
| !!! | GAAGAAGGCAATTTTAAGTT+AGG | + | chr3_1:63739533-63739552 | None:intergenic | 30.0% |
| !! | TTTACGTTTTAGTGGGAAAT+TGG | - | chr3_1:63739592-63739611 | Msa0367830:CDS | 30.0% |
| GATAACAAGTAGTCCAATAT+AGG | + | chr3_1:63739629-63739648 | None:intergenic | 30.0% | |
| AAAATACGTTGAATCAACTG+TGG | - | chr3_1:63739816-63739835 | Msa0367830:CDS | 30.0% | |
| AAATAGAGTTGAAGCAAACT+AGG | - | chr3_1:63739884-63739903 | Msa0367830:intron | 30.0% | |
| !!! | CGGTCCAATTTTTAAAACAT+TGG | - | chr3_1:63739968-63739987 | Msa0367830:CDS | 30.0% |
| CTTGGTTCAAAATCATCATA+GGG | + | chr3_1:63740161-63740180 | None:intergenic | 30.0% | |
| AAGTATAAAGAGGTTTACCT+TGG | + | chr3_1:63740179-63740198 | None:intergenic | 30.0% | |
| GCACTTTATGAAGTATAAAG+AGG | + | chr3_1:63740189-63740208 | None:intergenic | 30.0% | |
| TTATTCATAGGTTTAAGCAG+TGG | - | chr3_1:63740249-63740268 | Msa0367830:intron | 30.0% | |
| TATTCATAGGTTTAAGCAGT+GGG | - | chr3_1:63740250-63740269 | Msa0367830:intron | 30.0% | |
| AAAACTTCTCCATGTTCATT+GGG | + | chr3_1:63740358-63740377 | None:intergenic | 30.0% | |
| AAAAACTTCTCCATGTTCAT+TGG | + | chr3_1:63740359-63740378 | None:intergenic | 30.0% | |
| ATTGTGATCTTCTCTATTCA+TGG | - | chr3_1:63740404-63740423 | Msa0367830:CDS | 30.0% | |
| !! | AATTTTGCCTCCTCTAAAAA+TGG | + | chr3_1:63740528-63740547 | None:intergenic | 30.0% |
| ! | AATTGATTCTAACTAGATGC+TGG | - | chr3_1:63740617-63740636 | Msa0367830:intron | 30.0% |
| TTGGATGCATTCACTTAAAA+GGG | + | chr3_1:63740699-63740718 | None:intergenic | 30.0% | |
| TTTGGATGCATTCACTTAAA+AGG | + | chr3_1:63740700-63740719 | None:intergenic | 30.0% | |
| TGAACAGGTAGTTTACATAT+TGG | - | chr3_1:63740862-63740881 | Msa0367830:intron | 30.0% | |
| CTACTTAGAATTAAGCAACA+AGG | - | chr3_1:63740914-63740933 | Msa0367830:intron | 30.0% | |
| AAACATACCACAAGAATTTG+AGG | + | chr3_1:63740953-63740972 | None:intergenic | 30.0% | |
| ATCCTACATTTGATGAGATA+TGG | - | chr3_1:63741277-63741296 | Msa0367830:CDS | 30.0% | |
| GTGAAAATGCGTTTATAAGT+TGG | - | chr3_1:63741301-63741320 | Msa0367830:intron | 30.0% | |
| ! | AAAATGCGTTTATAAGTTGG+AGG | - | chr3_1:63741304-63741323 | Msa0367830:intron | 30.0% |
| ! | TTTCCATTTGACTAGTTCTT+CGG | - | chr3_1:63741355-63741374 | Msa0367830:intron | 30.0% |
| ATAACTCAGGTAACTAACTT+AGG | - | chr3_1:63741498-63741517 | Msa0367830:intron | 30.0% | |
| AGTAAAAAGGACATCCTTAA+GGG | + | chr3_1:63741580-63741599 | None:intergenic | 30.0% | |
| TTAGCTCATATGCAGTAAAA+AGG | + | chr3_1:63741593-63741612 | None:intergenic | 30.0% | |
| TGCATATGAGCTAATAAATG+AGG | - | chr3_1:63741599-63741618 | Msa0367830:intron | 30.0% | |
| TGCATTCATTGCAATTGTAT+CGG | + | chr3_1:63741740-63741759 | None:intergenic | 30.0% | |
| TGTAAGGAAAATAGACAGTT+TGG | + | chr3_1:63742122-63742141 | None:intergenic | 30.0% | |
| !! | ATCCTTTGAAATCAAAAGAC+AGG | - | chr3_1:63742467-63742486 | Msa0367830:intron | 30.0% |
| !! | TCCTTTGAAATCAAAAGACA+GGG | - | chr3_1:63742468-63742487 | Msa0367830:intron | 30.0% |
| ! | CTAATCTAGAGCTAGTAAAT+TGG | + | chr3_1:63742904-63742923 | None:intergenic | 30.0% |
| AACATTGAATCAAGATTGCA+TGG | - | chr3_1:63742952-63742971 | Msa0367830:intron | 30.0% | |
| AGTGAATAATGAACCAAAAG+TGG | - | chr3_1:63743054-63743073 | Msa0367830:intron | 30.0% | |
| ! | ATGTGATGAGAATTTGAGAT+AGG | - | chr3_1:63743150-63743169 | Msa0367830:intron | 30.0% |
| GTCAAAATTTCTCGATTGAT+TGG | + | chr3_1:63743302-63743321 | None:intergenic | 30.0% | |
| !! | TTAATGTAGCTTATTTTCGG+CGG | - | chr3_1:63743506-63743525 | Msa0367830:CDS | 30.0% |
| AGAGTAGGTATCATATGAAG+AGG | - | chr3_1:63738643-63738662 | Msa0367830:three_prime_UTR | 35.0% | |
| CAAATATTGGAAGGCAATCT+TGG | - | chr3_1:63738765-63738784 | Msa0367830:intron | 35.0% | |
| TTACATATTCCCATACTCCA+GGG | + | chr3_1:63739251-63739270 | None:intergenic | 35.0% | |
| TTTACATATTCCCATACTCC+AGG | + | chr3_1:63739252-63739271 | None:intergenic | 35.0% | |
| ! | AGGTAATCGGTTGATGTTAT+AGG | + | chr3_1:63739303-63739322 | None:intergenic | 35.0% |
| AACCGATTACCTCAAATTCA+AGG | - | chr3_1:63739311-63739330 | Msa0367830:CDS | 35.0% | |
| CTAACTTGGGTTTATGTTGT+AGG | - | chr3_1:63739453-63739472 | Msa0367830:CDS | 35.0% | |
| ! | AATGCACTTGAAGCAGATTT+TGG | - | chr3_1:63739488-63739507 | Msa0367830:CDS | 35.0% |
| TTGCCTTCTTCAATTGGAAA+TGG | - | chr3_1:63739542-63739561 | Msa0367830:CDS | 35.0% | |
| AGTCCATTTCCAATTGAAGA+AGG | + | chr3_1:63739548-63739567 | None:intergenic | 35.0% | |
| GGCAAAAACACAACCTATAT+TGG | - | chr3_1:63739613-63739632 | Msa0367830:CDS | 35.0% | |
| ! | CAACATGTACACCAATGTTT+TGG | - | chr3_1:63739708-63739727 | Msa0367830:CDS | 35.0% |
| ATCACTGATCTCCAAAACAT+TGG | + | chr3_1:63739722-63739741 | None:intergenic | 35.0% | |
| TCTGAGTTATGGTTCAATCA+CGG | - | chr3_1:63739757-63739776 | Msa0367830:CDS | 35.0% | |
| !! | GAAGCAAACTAGGTCATTTT+TGG | - | chr3_1:63739894-63739913 | Msa0367830:intron | 35.0% |
| ACCGATTGAATTGACAAGTT+CGG | - | chr3_1:63739921-63739940 | Msa0367830:intron | 35.0% | |
| ACCGAACTTGTCAATTCAAT+CGG | + | chr3_1:63739925-63739944 | None:intergenic | 35.0% | |
| CCTTGGTTCAAAATCATCAT+AGG | + | chr3_1:63740162-63740181 | None:intergenic | 35.0% | |
| ! | CCTATGATGATTTTGAACCA+AGG | - | chr3_1:63740159-63740178 | Msa0367830:intron | 35.0% |
| ATTCATAGGTTTAAGCAGTG+GGG | - | chr3_1:63740251-63740270 | Msa0367830:intron | 35.0% | |
| CTTAACAACTTAACTACTCG+AGG | + | chr3_1:63740492-63740511 | None:intergenic | 35.0% | |
| !! | GTGCTTAGTTCCATTTTTAG+AGG | - | chr3_1:63740515-63740534 | Msa0367830:CDS | 35.0% |
| !! | CTTAGTTCCATTTTTAGAGG+AGG | - | chr3_1:63740518-63740537 | Msa0367830:intron | 35.0% |
| TGGATGCATTCACTTAAAAG+GGG | + | chr3_1:63740698-63740717 | None:intergenic | 35.0% | |
| ACATTCATTTAGCATGTGCT+TGG | + | chr3_1:63740809-63740828 | None:intergenic | 35.0% | |
| AAGCACATGCTAAATGAATG+TGG | - | chr3_1:63740808-63740827 | Msa0367830:intron | 35.0% | |
| ! | GCTTTTCTACAATCTTGAAC+AGG | - | chr3_1:63740847-63740866 | Msa0367830:intron | 35.0% |
| AGTGAATCCTCAAATTCTTG+TGG | - | chr3_1:63740943-63740962 | Msa0367830:CDS | 35.0% | |
| AACCAAATGCAATCAGGAAT+TGG | - | chr3_1:63741095-63741114 | Msa0367830:intron | 35.0% | |
| TTCCAATTCCTGATTGCATT+TGG | + | chr3_1:63741100-63741119 | None:intergenic | 35.0% | |
| ATTCCTTTATCCGTCTGAAA+AGG | + | chr3_1:63741162-63741181 | None:intergenic | 35.0% | |
| ACATCTATCCTTATCTTGAG+AGG | - | chr3_1:63741208-63741227 | Msa0367830:CDS | 35.0% | |
| TGAGTAAACCTCTCAAGATA+AGG | + | chr3_1:63741219-63741238 | None:intergenic | 35.0% | |
| TTATCTTGAGAGGTTTACTC+AGG | - | chr3_1:63741218-63741237 | Msa0367830:CDS | 35.0% | |
| AGTTCTTCGGTTCATGTTAT+AGG | - | chr3_1:63741368-63741387 | Msa0367830:intron | 35.0% | |
| AACTAAGATTCTCAACCTCA+TGG | - | chr3_1:63741398-63741417 | Msa0367830:intron | 35.0% | |
| GGAAAACCAGATCTCATTAT+AGG | - | chr3_1:63741423-63741442 | Msa0367830:intron | 35.0% | |
| AAATTTGGCAGCTTCTCTTA+TGG | - | chr3_1:63741461-63741480 | Msa0367830:intron | 35.0% | |
| TAGCAAACTTAGGATAACTC+AGG | - | chr3_1:63741485-63741504 | Msa0367830:intron | 35.0% | |
| CAGTAAAAAGGACATCCTTA+AGG | + | chr3_1:63741581-63741600 | None:intergenic | 35.0% | |
| ATGAAGATTCAGATGTCAAG+TGG | - | chr3_1:63741671-63741690 | Msa0367830:intron | 35.0% | |
| GTAAGTCTTCAATTGTAGGA+TGG | + | chr3_1:63742173-63742192 | None:intergenic | 35.0% | |
| CTTGCCATTGAGAAGATTAT+AGG | + | chr3_1:63742346-63742365 | None:intergenic | 35.0% | |
| CTATAATCTTCTCAATGGCA+AGG | - | chr3_1:63742344-63742363 | Msa0367830:intron | 35.0% | |
| GATGTTGTGAAGAACATAAC+CGG | - | chr3_1:63742370-63742389 | Msa0367830:intron | 35.0% | |
| AATGGTATGGCAAGAACAAA+AGG | - | chr3_1:63742401-63742420 | Msa0367830:intron | 35.0% | |
| !!! | TCCCTGTCTTTTGATTTCAA+AGG | + | chr3_1:63742472-63742491 | None:intergenic | 35.0% |
| !! | ATTACTGTTGATGGTGTTTC+TGG | - | chr3_1:63742733-63742752 | Msa0367830:intron | 35.0% |
| ACATTGGAACATGATTTCAG+CGG | - | chr3_1:63742837-63742856 | Msa0367830:CDS | 35.0% | |
| GATTGCAGCGTATTAATGAA+TGG | - | chr3_1:63742863-63742882 | Msa0367830:CDS | 35.0% | |
| CAGCGTATTAATGAATGGTA+AGG | - | chr3_1:63742868-63742887 | Msa0367830:CDS | 35.0% | |
| TGCAAACAAGTTGCTGAATA+TGG | - | chr3_1:63743006-63743025 | Msa0367830:intron | 35.0% | |
| GCAAACAAGTTGCTGAATAT+GGG | - | chr3_1:63743007-63743026 | Msa0367830:intron | 35.0% | |
| !!! | TATCTTTGCTTTGCCACTTT+TGG | + | chr3_1:63743070-63743089 | None:intergenic | 35.0% |
| TGGCAAAGCAAAGATACATT+TGG | - | chr3_1:63743074-63743093 | Msa0367830:intron | 35.0% | |
| AATTTCATGGCTTCTGCATC+AGG | - | chr3_1:63738561-63738580 | Msa0367830:three_prime_UTR | 40.0% | |
| ATTTCATGGCTTCTGCATCA+GGG | - | chr3_1:63738562-63738581 | Msa0367830:three_prime_UTR | 40.0% | |
| CATATGATACCTACTCTGCT+TGG | + | chr3_1:63738640-63738659 | None:intergenic | 40.0% | |
| TTTGCCAAGTACCTTGAGAA+AGG | - | chr3_1:63738669-63738688 | Msa0367830:exon | 40.0% | |
| ! | TCTACCTTTCTCAAGGTACT+TGG | + | chr3_1:63738676-63738695 | None:intergenic | 40.0% |
| AGTACCTTGAGAAAGGTAGA+AGG | - | chr3_1:63738676-63738695 | Msa0367830:exon | 40.0% | |
| TGATCCTTCTACCTTTCTCA+AGG | + | chr3_1:63738683-63738702 | None:intergenic | 40.0% | |
| CTTACTGCAAAGGCAACATA+TGG | + | chr3_1:63739222-63739241 | None:intergenic | 40.0% | |
| CATATGTTGCCTTTGCAGTA+AGG | - | chr3_1:63739220-63739239 | Msa0367830:intron | 40.0% | |
| GAATCAACTGTGGTTCAATC+TGG | - | chr3_1:63739826-63739845 | Msa0367830:CDS | 40.0% | |
| ACTAGTAGTCTAGTCGAATC+TGG | + | chr3_1:63739857-63739876 | None:intergenic | 40.0% | |
| !!! | TTAGCATGTGCTTGGTTTTG+CGG | + | chr3_1:63740801-63740820 | None:intergenic | 40.0% |
| ATTGGATCAAGTGAGAGCTT+TGG | - | chr3_1:63740880-63740899 | Msa0367830:intron | 40.0% | |
| GTTGACAATGATAGGTCACA+AGG | - | chr3_1:63741052-63741071 | Msa0367830:CDS | 40.0% | |
| TCAAGGAACCAAATGCAATC+AGG | - | chr3_1:63741089-63741108 | Msa0367830:intron | 40.0% | |
| !!! | TTTTTGAGTGCTTGGTGTCA+AGG | + | chr3_1:63741128-63741147 | None:intergenic | 40.0% |
| !!! | GCGTAGAATTTTTGAGTGCT+TGG | + | chr3_1:63741136-63741155 | None:intergenic | 40.0% |
| ATAAAGGAATCCTGCGTCAA+TGG | - | chr3_1:63741172-63741191 | Msa0367830:intron | 40.0% | |
| TAAAGGAATCCTGCGTCAAT+GGG | - | chr3_1:63741173-63741192 | Msa0367830:intron | 40.0% | |
| CGCCATATCTCATCAAATGT+AGG | + | chr3_1:63741282-63741301 | None:intergenic | 40.0% | |
| GAACCGAAGAACTAGTCAAA+TGG | + | chr3_1:63741361-63741380 | None:intergenic | 40.0% | |
| GAGGTTGAGAATCTTAGTTG+TGG | + | chr3_1:63741397-63741416 | None:intergenic | 40.0% | |
| AAGATTCTCAACCTCATGGA+AGG | - | chr3_1:63741402-63741421 | Msa0367830:intron | 40.0% | |
| CTCTTATGGCTAGCAAACTT+AGG | - | chr3_1:63741475-63741494 | Msa0367830:intron | 40.0% | |
| AATGAGGTTGCTTGAAAACC+AGG | - | chr3_1:63741615-63741634 | Msa0367830:intron | 40.0% | |
| ATGAGGTTGCTTGAAAACCA+GGG | - | chr3_1:63741616-63741635 | Msa0367830:intron | 40.0% | |
| GGCATGAGAAGTGATACTTA+GGG | + | chr3_1:63741708-63741727 | None:intergenic | 40.0% | |
| TGGCATGAGAAGTGATACTT+AGG | + | chr3_1:63741709-63741728 | None:intergenic | 40.0% | |
| TCACTTCTCATGCCAATTCA+TGG | - | chr3_1:63741714-63741733 | Msa0367830:CDS | 40.0% | |
| ! | CAATTGTATCGGCCATGAAT+TGG | + | chr3_1:63741729-63741748 | None:intergenic | 40.0% |
| CATCATAACCAGCACATATC+AGG | - | chr3_1:63741768-63741787 | Msa0367830:CDS | 40.0% | |
| AGCAATTTCCTGATATGTGC+TGG | + | chr3_1:63741779-63741798 | None:intergenic | 40.0% | |
| AGCACATATCAGGAAATTGC+TGG | - | chr3_1:63741778-63741797 | Msa0367830:CDS | 40.0% | |
| CATATCAGGAAATTGCTGGA+AGG | - | chr3_1:63741782-63741801 | Msa0367830:CDS | 40.0% | |
| TTATCAGTGTGTGTCATGTC+CGG | + | chr3_1:63741872-63741891 | None:intergenic | 40.0% | |
| !! | TATCATCAGTGTCGACATGA+CGG | + | chr3_1:63741907-63741926 | None:intergenic | 40.0% |
| AAACAACTCTGCATAGTCCT+GGG | + | chr3_1:63742047-63742066 | None:intergenic | 40.0% | |
| ! | GACTATGCAGAGTTGTTTCA+GGG | - | chr3_1:63742049-63742068 | Msa0367830:CDS | 40.0% |
| CTCTTGTCTTTCTCAGTGTA+AGG | + | chr3_1:63742138-63742157 | None:intergenic | 40.0% | |
| ! | ACATAACCGGTTTAGTCGAA+TGG | - | chr3_1:63742383-63742402 | Msa0367830:intron | 40.0% |
| GAACAAAAGGTTGAGAAGCT+TGG | - | chr3_1:63742414-63742433 | Msa0367830:intron | 40.0% | |
| TTGGTGAACCTTGTCATAGT+TGG | - | chr3_1:63742433-63742452 | Msa0367830:intron | 40.0% | |
| ATCAAAAGACAGGGAAGAGA+TGG | - | chr3_1:63742477-63742496 | Msa0367830:intron | 40.0% | |
| CCAAATGCTTCATACAAAGC+AGG | + | chr3_1:63742643-63742662 | None:intergenic | 40.0% | |
| ! | CCTGCTTTGTATGAAGCATT+TGG | - | chr3_1:63742640-63742659 | Msa0367830:CDS | 40.0% |
| GTCATTGAAGCAATGAACTG+TGG | - | chr3_1:63742670-63742689 | Msa0367830:CDS | 40.0% | |
| CCATGGTTAGTAGCAAAAGT+TGG | + | chr3_1:63742700-63742719 | None:intergenic | 40.0% | |
| ! | CCAACTTTTGCTACTAACCA+TGG | - | chr3_1:63742697-63742716 | Msa0367830:intron | 40.0% |
| ! | ACTTTTGCTACTAACCATGG+TGG | - | chr3_1:63742700-63742719 | Msa0367830:intron | 40.0% |
| TTCCATATCGATCCTCTCAA+TGG | - | chr3_1:63742757-63742776 | Msa0367830:intron | 40.0% | |
| ! | GTAAAGTGGATTCGACACAT+TGG | - | chr3_1:63742821-63742840 | Msa0367830:CDS | 40.0% |
| GGTTGTTGAGGTTCATCAAT+TGG | + | chr3_1:63743222-63743241 | None:intergenic | 40.0% | |
| TCAGAAAACAAGGAACAAGC+AGG | - | chr3_1:63743268-63743287 | Msa0367830:intron | 40.0% | |
| CCTGCAGTAGCAAAACAATA+GGG | + | chr3_1:63743444-63743463 | None:intergenic | 40.0% | |
| TTGATCTTAACCCTGTGATC+TGG | + | chr3_1:63743477-63743496 | None:intergenic | 40.0% | |
| ACTGATAGACGGGCATGTTA+GGG | + | chr3_1:63738883-63738902 | None:intergenic | 45.0% | |
| TACTGATAGACGGGCATGTT+AGG | + | chr3_1:63738884-63738903 | None:intergenic | 45.0% | |
| ACTGCAAAGGCAACATATGG+TGG | + | chr3_1:63739219-63739238 | None:intergenic | 45.0% | |
| CCATAACTCAGAAGTCTCTC+TGG | + | chr3_1:63739749-63739768 | None:intergenic | 45.0% | |
| CCAGAGAGACTTCTGAGTTA+TGG | - | chr3_1:63739746-63739765 | Msa0367830:CDS | 45.0% | |
| ATTCCTTTCAGCACTTCCAG+TGG | - | chr3_1:63740130-63740149 | Msa0367830:CDS | 45.0% | |
| !! | TATCCACTGGAAGTGCTGAA+AGG | + | chr3_1:63740136-63740155 | None:intergenic | 45.0% |
| !! | TCATCATAGGGAGTATCCAC+TGG | + | chr3_1:63740149-63740168 | None:intergenic | 45.0% |
| !!! | AAGCAGTGGGGTTTTGAAAG+TGG | - | chr3_1:63740263-63740282 | Msa0367830:intron | 45.0% |
| !!! | AGTGGGGTTTTGAAAGTGGA+TGG | - | chr3_1:63740267-63740286 | Msa0367830:intron | 45.0% |
| !!! | GTGGGGTTTTGAAAGTGGAT+GGG | - | chr3_1:63740268-63740287 | Msa0367830:intron | 45.0% |
| !!! | TGGGGTTTTGAAAGTGGATG+GGG | - | chr3_1:63740269-63740288 | Msa0367830:intron | 45.0% |
| AGATACTGCAGGAAGAGTGA+AGG | - | chr3_1:63740292-63740311 | Msa0367830:intron | 45.0% | |
| TTCTCCATGTTCATTGGGTC+TGG | + | chr3_1:63740353-63740372 | None:intergenic | 45.0% | |
| TTTGGTCAAGCAGATGTCCT+TGG | - | chr3_1:63740431-63740450 | Msa0367830:CDS | 45.0% | |
| TAGAAATGTTACCTGTCCGC+CGG | + | chr3_1:63740468-63740487 | None:intergenic | 45.0% | |
| ! | CATTTGGTTCCTTGAGCATC+AGG | + | chr3_1:63741084-63741103 | None:intergenic | 45.0% |
| ! | GTGCCTTTTCAGACGGATAA+AGG | - | chr3_1:63741156-63741175 | Msa0367830:intron | 45.0% |
| !!! | GATCTGGTTTTCCTTCCATG+AGG | + | chr3_1:63741416-63741435 | None:intergenic | 45.0% |
| AAGCATGTGCTATAGTTCCC+TGG | + | chr3_1:63741636-63741655 | None:intergenic | 45.0% | |
| GCTTGCAGCAAAGATAAACC+TGG | - | chr3_1:63741991-63742010 | Msa0367830:CDS | 45.0% | |
| GCATGGCTTTCATATTGTCC+AGG | + | chr3_1:63742012-63742031 | None:intergenic | 45.0% | |
| ! | CTGGGAGTGTAAATGTTGCA+TGG | + | chr3_1:63742029-63742048 | None:intergenic | 45.0% |
| CATGCAACATTTACACTCCC+AGG | - | chr3_1:63742027-63742046 | Msa0367830:CDS | 45.0% | |
| GAAACAACTCTGCATAGTCC+TGG | + | chr3_1:63742048-63742067 | None:intergenic | 45.0% | |
| ! | GGACTATGCAGAGTTGTTTC+AGG | - | chr3_1:63742048-63742067 | Msa0367830:CDS | 45.0% |
| GGTGCAGCTATGTTGAACTT+AGG | + | chr3_1:63742090-63742109 | None:intergenic | 45.0% | |
| AAGTTCAACATAGCTGCACC+TGG | - | chr3_1:63742090-63742109 | Msa0367830:CDS | 45.0% | |
| ! | ACCGGTTTAGTCGAATGGTA+TGG | - | chr3_1:63742388-63742407 | Msa0367830:intron | 45.0% |
| GCCATACCATTCGACTAAAC+CGG | + | chr3_1:63742392-63742411 | None:intergenic | 45.0% | |
| GTGAACCTTGTCATAGTTGG+AGG | - | chr3_1:63742436-63742455 | Msa0367830:intron | 45.0% | |
| AGAAGCCTCCAACTATGACA+AGG | + | chr3_1:63742444-63742463 | None:intergenic | 45.0% | |
| GGGAAGAGATGGCAGAAATA+AGG | - | chr3_1:63742488-63742507 | Msa0367830:intron | 45.0% | |
| TCGATTCATTGCCGACACAA+AGG | - | chr3_1:63742603-63742622 | Msa0367830:CDS | 45.0% | |
| CGATTCATTGCCGACACAAA+GGG | - | chr3_1:63742604-63742623 | Msa0367830:CDS | 45.0% | |
| CACAAAAGCTCCCTTTGTGT+CGG | + | chr3_1:63742617-63742636 | None:intergenic | 45.0% | |
| CCATCAACAGTAATTTCCGC+TGG | + | chr3_1:63742727-63742746 | None:intergenic | 45.0% | |
| CCAGCGGAAATTACTGTTGA+TGG | - | chr3_1:63742724-63742743 | Msa0367830:intron | 45.0% | |
| CTCCATTGAGAGGATCGATA+TGG | + | chr3_1:63742762-63742781 | None:intergenic | 45.0% | |
| ! | CTTGATTCGTCTCCATTGAG+AGG | + | chr3_1:63742772-63742791 | None:intergenic | 45.0% |
| !!! | TTTTCTGAGACTCTGCTGCT+TGG | + | chr3_1:63743256-63743275 | None:intergenic | 45.0% |
| CAGCAGAGTCTCAGAAAACA+AGG | - | chr3_1:63743258-63743277 | Msa0367830:intron | 45.0% | |
| !! | CCCTATTGTTTTGCTACTGC+AGG | - | chr3_1:63743441-63743460 | Msa0367830:CDS | 45.0% |
| GCCTGCAGTAGCAAAACAAT+AGG | + | chr3_1:63743445-63743464 | None:intergenic | 45.0% | |
| CTACTCTGCTTGGATGCATC+TGG | + | chr3_1:63738630-63738649 | None:intergenic | 50.0% | |
| CAGATGCATCCAAGCAGAGT+AGG | - | chr3_1:63738628-63738647 | Msa0367830:three_prime_UTR | 50.0% | |
| TATTCCCATACTCCAGGGTC+TGG | + | chr3_1:63739246-63739265 | None:intergenic | 50.0% | |
| CAGCTTTGCAACTGAGCTCA+GGG | + | chr3_1:63740084-63740103 | None:intergenic | 50.0% | |
| CTCAGTTGCAAAGCTGCAGA+TGG | - | chr3_1:63740088-63740107 | Msa0367830:CDS | 50.0% | |
| AGCTCCAGACCCAATGAACA+TGG | - | chr3_1:63740346-63740365 | Msa0367830:intron | 50.0% | |
| AGGCTCATACCTGATGCTCA+AGG | - | chr3_1:63741072-63741091 | Msa0367830:CDS | 50.0% | |
| !! | GAGTGCTTGGTGTCAAGGAT+TGG | + | chr3_1:63741123-63741142 | None:intergenic | 50.0% |
| ! | TCTACGCGTGCCTTTTCAGA+CGG | - | chr3_1:63741149-63741168 | Msa0367830:intron | 50.0% |
| AGAAGAACTGACACAGCCAC+CGG | - | chr3_1:63741850-63741869 | Msa0367830:CDS | 50.0% | |
| TAGACAGTTTGGTCAGCACC+AGG | + | chr3_1:63742111-63742130 | None:intergenic | 50.0% | |
| CAGACCGATAGACATCGCAA+CGG | - | chr3_1:63742571-63742590 | Msa0367830:CDS | 50.0% | |
| CTCTCCGTTGCGATGTCTAT+CGG | + | chr3_1:63742578-63742597 | None:intergenic | 50.0% | |
| TACTAACCATGGTGGTCCAG+CGG | - | chr3_1:63742708-63742727 | Msa0367830:intron | 50.0% | |
| TAATTTCCGCTGGACCACCA+TGG | + | chr3_1:63742717-63742736 | None:intergenic | 50.0% | |
| TGGAACATGATTTCAGCGGC+AGG | - | chr3_1:63742841-63742860 | Msa0367830:CDS | 50.0% | |
| ! | GAGTTGGACACTGGTTGTTG+AGG | + | chr3_1:63743234-63743253 | None:intergenic | 50.0% |
| TTTGCTACTGCAGGCGTTCA+AGG | - | chr3_1:63743450-63743469 | Msa0367830:CDS | 50.0% | |
| CGTTCAAGGTCCAGATCACA+GGG | - | chr3_1:63743464-63743483 | Msa0367830:CDS | 50.0% | |
| !! | AGGGTCTGGCCTTACTGCAA+AGG | + | chr3_1:63739232-63739251 | None:intergenic | 55.0% |
| TTTGCAGTAAGGCCAGACCC+TGG | - | chr3_1:63739231-63739250 | Msa0367830:intron | 55.0% | |
| TAAGGCCAGACCCTGGAGTA+TGG | - | chr3_1:63739238-63739257 | Msa0367830:intron | 55.0% | |
| AAGGCCAGACCCTGGAGTAT+GGG | - | chr3_1:63739239-63739258 | Msa0367830:intron | 55.0% | |
| GCAGCTTTGCAACTGAGCTC+AGG | + | chr3_1:63740085-63740104 | None:intergenic | 55.0% | |
| AGTGGATGGGGAGATACTGC+AGG | - | chr3_1:63740281-63740300 | Msa0367830:intron | 55.0% | |
| !! | GTCCTTGGCTTGCCAGATAC+CGG | - | chr3_1:63740446-63740465 | Msa0367830:CDS | 55.0% |
| AGCGAGAAACCCATTGACGC+AGG | + | chr3_1:63741185-63741204 | None:intergenic | 55.0% | |
| TCAGTGTGTGTCATGTCCGG+TGG | + | chr3_1:63741869-63741888 | None:intergenic | 55.0% | |
| ! | TGCTGCTTGGAGTTGGACAC+TGG | + | chr3_1:63743243-63743262 | None:intergenic | 55.0% |
| ! | GAGACTCTGCTGCTTGGAGT+TGG | + | chr3_1:63743250-63743269 | None:intergenic | 55.0% |
| GCGTTCAAGGTCCAGATCAC+AGG | - | chr3_1:63743463-63743482 | Msa0367830:CDS | 55.0% | |
| !! | GCTGCAGATGGCTCTGACAG+TGG | - | chr3_1:63740100-63740119 | Msa0367830:CDS | 60.0% |
| !! | CTTGGCTTGCCAGATACCGG+CGG | - | chr3_1:63740449-63740468 | Msa0367830:CDS | 60.0% |
| GTTACCTGTCCGCCGGTATC+TGG | + | chr3_1:63740461-63740480 | None:intergenic | 60.0% | |
| CGCCGGTATCTGGCAAGCCA+AGG | + | chr3_1:63740451-63740470 | None:intergenic | 65.0% | |
| CTTGCCAGATACCGGCGGAC+AGG | - | chr3_1:63740454-63740473 | Msa0367830:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 63738539 | 63743632 | 63738539 | ID=Msa0367830;Name=Msa0367830 |
| chr3_1 | mRNA | 63738539 | 63743632 | 63738539 | ID=Msa0367830-mRNA-1;Parent=Msa0367830;Name=Msa0367830-mRNA-1;_AED=0.05;_eAED=0.05;_QI=28|1|1|1|1|1|14|142|842 |
| chr3_1 | exon | 63738539 | 63738708 | 63738539 | ID=Msa0367830-mRNA-1:exon:12691;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63738882 | 63738970 | 63738882 | ID=Msa0367830-mRNA-1:exon:12690;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63739045 | 63739183 | 63739045 | ID=Msa0367830-mRNA-1:exon:12689;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63739287 | 63739853 | 63739287 | ID=Msa0367830-mRNA-1:exon:12688;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63739948 | 63740172 | 63739948 | ID=Msa0367830-mRNA-1:exon:12687;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63740368 | 63740534 | 63740368 | ID=Msa0367830-mRNA-1:exon:12686;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63740665 | 63740781 | 63740665 | ID=Msa0367830-mRNA-1:exon:12685;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63740932 | 63741105 | 63740932 | ID=Msa0367830-mRNA-1:exon:12684;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63741207 | 63741302 | 63741207 | ID=Msa0367830-mRNA-1:exon:12683;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63741696 | 63741912 | 63741696 | ID=Msa0367830-mRNA-1:exon:12682;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63741991 | 63742109 | 63741991 | ID=Msa0367830-mRNA-1:exon:12681;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63742504 | 63742696 | 63742504 | ID=Msa0367830-mRNA-1:exon:12680;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63742816 | 63742970 | 63742816 | ID=Msa0367830-mRNA-1:exon:12679;Parent=Msa0367830-mRNA-1 |
| chr3_1 | exon | 63743362 | 63743632 | 63743362 | ID=Msa0367830-mRNA-1:exon:12678;Parent=Msa0367830-mRNA-1 |
| chr3_1 | five_prime_UTR | 63743605 | 63743632 | 63743605 | ID=Msa0367830-mRNA-1:five_prime_utr;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63743362 | 63743604 | 63743362 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63742816 | 63742970 | 63742816 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63742504 | 63742696 | 63742504 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63741991 | 63742109 | 63741991 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63741696 | 63741912 | 63741696 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63741207 | 63741302 | 63741207 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63740932 | 63741105 | 63740932 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63740665 | 63740781 | 63740665 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63740368 | 63740534 | 63740368 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63739948 | 63740172 | 63739948 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63739287 | 63739853 | 63739287 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63739045 | 63739183 | 63739045 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63738882 | 63738970 | 63738882 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | CDS | 63738681 | 63738708 | 63738681 | ID=Msa0367830-mRNA-1:cds;Parent=Msa0367830-mRNA-1 |
| chr3_1 | three_prime_UTR | 63738539 | 63738680 | 63738539 | ID=Msa0367830-mRNA-1:three_prime_utr;Parent=Msa0367830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
