Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415610 | XP_003600643.1 | 98.575 | 842 | 12 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415610 | sp|Q9FX32|SUS6_ARATH | 69.902 | 814 | 242 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415610 | G7J800 | 98.575 | 842 | 12 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1733 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004630 | Msa0415610 | 0.800488 | 1.407690e-48 | -8.615850e-47 |
| Msa0015150 | Msa0415610 | 0.830145 | 3.462935e-55 | -8.615850e-47 |
| Msa0029970 | Msa0415610 | 0.805092 | 1.577597e-49 | -8.615850e-47 |
| Msa0034210 | Msa0415610 | 0.804262 | 2.350391e-49 | -8.615850e-47 |
| Msa0064120 | Msa0415610 | 0.805754 | 1.145603e-49 | -8.615850e-47 |
| Msa0071850 | Msa0415610 | 0.822232 | 2.645035e-53 | -8.615850e-47 |
| Msa0071860 | Msa0415610 | 0.827315 | 1.674678e-54 | -8.615850e-47 |
| Msa0077340 | Msa0415610 | 0.804230 | 2.387328e-49 | -8.615850e-47 |
| Msa0081520 | Msa0415610 | 0.813092 | 3.049647e-51 | -8.615850e-47 |
| Msa0094740 | Msa0415610 | 0.814425 | 1.550670e-51 | -8.615850e-47 |
| Msa0094780 | Msa0415610 | 0.800515 | 1.390070e-48 | -8.615850e-47 |
| Msa0108880 | Msa0415610 | 0.847459 | 1.140797e-59 | -8.615850e-47 |
| Msa0125210 | Msa0415610 | 0.815257 | 1.014110e-51 | -8.615850e-47 |
| Msa0125360 | Msa0415610 | 0.803882 | 2.819165e-49 | -8.615850e-47 |
| Msa0128310 | Msa0415610 | 0.805202 | 1.496133e-49 | -8.615850e-47 |
| Msa0136650 | Msa0415610 | 0.814017 | 1.908126e-51 | -8.615850e-47 |
| Msa0137210 | Msa0415610 | 0.813388 | 2.625814e-51 | -8.615850e-47 |
| Msa0164400 | Msa0415610 | 0.811280 | 7.577978e-51 | -8.615850e-47 |
| Msa0174450 | Msa0415610 | 0.852317 | 4.996706e-61 | -8.615850e-47 |
| Msa0191020 | Msa0415610 | 0.815156 | 1.067917e-51 | -8.615850e-47 |
| Msa0194820 | Msa0415610 | 0.816880 | 4.402936e-52 | -8.615850e-47 |
| Msa0194840 | Msa0415610 | 0.812712 | 3.693560e-51 | -8.615850e-47 |
| Msa0211030 | Msa0415610 | 0.804924 | 1.710377e-49 | -8.615850e-47 |
| Msa0233320 | Msa0415610 | 0.816386 | 5.679139e-52 | -8.615850e-47 |
| Msa0367830 | Msa0415610 | 0.819589 | 1.073121e-52 | -8.615850e-47 |
| Msa0369790 | Msa0415610 | 0.802955 | 4.387535e-49 | -8.615850e-47 |
| Msa0380620 | Msa0415610 | 0.803874 | 2.829934e-49 | -8.615850e-47 |
| Msa0388770 | Msa0415610 | 0.805852 | 1.092567e-49 | -8.615850e-47 |
| Msa0392380 | Msa0415610 | 0.810578 | 1.075060e-50 | -8.615850e-47 |
| Msa0393340 | Msa0415610 | 0.821776 | 3.373213e-53 | -8.615850e-47 |
| Msa0405680 | Msa0415610 | 0.843153 | 1.669675e-58 | -8.615850e-47 |
| Msa0415610 | Msa0418970 | 0.824808 | 6.604509e-54 | -8.615850e-47 |
| Msa0415610 | Msa0430260 | 0.810516 | 1.109064e-50 | -8.615850e-47 |
| Msa0415610 | Msa0440320 | 0.800580 | 1.348234e-48 | -8.615850e-47 |
| Msa0415610 | Msa0460550 | 0.810168 | 1.317908e-50 | -8.615850e-47 |
| Msa0415610 | Msa0460630 | 0.937386 | 3.767252e-98 | -8.615850e-47 |
| Msa0415610 | Msa0478790 | 0.803115 | 4.066960e-49 | -8.615850e-47 |
| Msa0415610 | Msa0528570 | 0.845249 | 4.568008e-59 | -8.615850e-47 |
| Msa0415610 | Msa0529030 | 0.813000 | 3.194209e-51 | -8.615850e-47 |
| Msa0415610 | Msa0557460 | 0.819790 | 9.654172e-53 | -8.615850e-47 |
| Msa0415610 | Msa0562620 | 0.836609 | 8.465928e-57 | -8.615850e-47 |
| Msa0415610 | Msa0611210 | 0.836709 | 7.982700e-57 | -8.615850e-47 |
| Msa0415610 | Msa0616510 | 0.838521 | 2.737401e-57 | -8.615850e-47 |
| Msa0415610 | Msa0626450 | 0.823302 | 1.490631e-53 | -8.615850e-47 |
| Msa0415610 | Msa0626490 | 0.818185 | 2.236981e-52 | -8.615850e-47 |
| Msa0415610 | Msa0651550 | 0.828194 | 1.029483e-54 | -8.615850e-47 |
| Msa0415610 | Msa0664600 | 0.821198 | 4.587290e-53 | -8.615850e-47 |
| Msa0415610 | Msa0674480 | 0.801129 | 1.041551e-48 | -8.615850e-47 |
| Msa0415610 | Msa0683960 | 0.815002 | 1.155512e-51 | -8.615850e-47 |
| Msa0415610 | Msa0699840 | 0.849993 | 2.263558e-60 | -8.615850e-47 |
| Msa0415610 | Msa0701700 | 0.808188 | 3.502187e-50 | -8.615850e-47 |
| Msa0415610 | Msa0738700 | 0.845736 | 3.370995e-59 | -8.615850e-47 |
| Msa0415610 | Msa0741220 | 0.830546 | 2.762938e-55 | -8.615850e-47 |
| Msa0415610 | Msa0742740 | 0.800224 | 1.593632e-48 | -8.615850e-47 |
| Msa0415610 | Msa0782750 | 0.851460 | 8.751321e-61 | -8.615850e-47 |
| Msa0415610 | Msa0783530 | 0.825464 | 4.620267e-54 | -8.615850e-47 |
| Msa0415610 | Msa0819170 | 0.822859 | 1.891000e-53 | -8.615850e-47 |
| Msa0415610 | Msa0820380 | 0.811892 | 5.576664e-51 | -8.615850e-47 |
| Msa0415610 | Msa0829300 | 0.831218 | 1.890621e-55 | -8.615850e-47 |
| Msa0415610 | Msa0829330 | 0.823505 | 1.336132e-53 | -8.615850e-47 |
| Msa0415610 | Msa0833650 | 0.801952 | 7.062680e-49 | -8.615850e-47 |
| Msa0415610 | Msa0859290 | 0.824509 | 7.767222e-54 | -8.615850e-47 |
| Msa0415610 | Msa0860790 | 0.806575 | 7.694753e-50 | -8.615850e-47 |
| Msa0415610 | Msa1014320 | 0.812021 | 5.226956e-51 | -8.615850e-47 |
| Msa0415610 | Msa1020630 | 0.813290 | 2.758819e-51 | -8.615850e-47 |
| Msa0415610 | Msa1042160 | 0.803794 | 2.940554e-49 | -8.615850e-47 |
| Msa0415610 | Msa1042190 | 0.807901 | 4.030191e-50 | -8.615850e-47 |
| Msa0415610 | Msa1072940 | 0.832335 | 1.002740e-55 | -8.615850e-47 |
| Msa0415610 | Msa1113800 | 0.820224 | 7.678119e-53 | -8.615850e-47 |
| Msa0415610 | Msa1132840 | 0.800790 | 1.221418e-48 | -8.615850e-47 |
| Msa0415610 | Msa1150820 | 0.806749 | 7.071717e-50 | -8.615850e-47 |
| Msa0415610 | Msa1160500 | 0.819955 | 8.848772e-53 | -8.615850e-47 |
| Msa0415610 | Msa1160920 | 0.835755 | 1.394659e-56 | -8.615850e-47 |
| Msa0415610 | Msa1184330 | 0.800231 | 1.587908e-48 | -8.615850e-47 |
| Msa0415610 | Msa1208950 | 0.808477 | 3.038906e-50 | -8.615850e-47 |
| Msa0415610 | Msa1242370 | 0.803092 | 4.110893e-49 | -8.615850e-47 |
| Msa0415610 | Msa1284120 | 0.843255 | 1.568285e-58 | -8.615850e-47 |
| Msa0415610 | Msa1341890 | 0.844798 | 6.049265e-59 | -8.615850e-47 |
| Msa0415610 | Msa1356830 | 0.815839 | 7.526957e-52 | -8.615850e-47 |
| Msa0415610 | Msa1405460 | 0.811107 | 8.258622e-51 | -8.615850e-47 |
| Msa0415610 | Msa1415540 | 0.843284 | 1.539963e-58 | -8.615850e-47 |
| Msa0415610 | Msa1433810 | 0.800469 | 1.420732e-48 | -8.615850e-47 |
| Msa0415610 | Msa1440960 | 0.816198 | 6.256957e-52 | -8.615850e-47 |
| Msa0415610 | Msa1452140 | 0.802061 | 6.707689e-49 | -8.615850e-47 |
| Msa0415610 | Msa1459360 | 0.841548 | 4.444535e-58 | -8.615850e-47 |
| Msa0243600 | Msa0415610 | 0.800145 | 1.653129e-48 | -8.615850e-47 |
| Msa0307270 | Msa0415610 | 0.833990 | 3.881602e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415610 | MtrunA17_Chr3g0109841 | 98.575 | 842 | 12 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1733 |
| Msa0415610 | MtrunA17_Chr5g0433761 | 82.122 | 839 | 144 | 3 | 1 | 838 | 1 | 834 | 0.0 | 1453 |
| Msa0415610 | MtrunA17_Chr6g0481131 | 70.711 | 816 | 239 | 0 | 19 | 834 | 18 | 833 | 0.0 | 1235 |
| Msa0415610 | MtrunA17_Chr6g0481171 | 72.624 | 705 | 189 | 1 | 134 | 834 | 5 | 709 | 0.0 | 1082 |
| Msa0415610 | MtrunA17_Chr1g0195241 | 58.161 | 772 | 322 | 1 | 37 | 808 | 16 | 786 | 0.0 | 941 |
| Msa0415610 | MtrunA17_Chr7g0269581 | 55.283 | 814 | 357 | 3 | 1 | 814 | 1 | 807 | 0.0 | 935 |
| Msa0415610 | MtrunA17_Chr2g0301621 | 54.557 | 812 | 358 | 7 | 5 | 814 | 2 | 804 | 0.0 | 931 |
| Msa0415610 | MtrunA17_Chr4g0070011 | 55.838 | 788 | 342 | 4 | 27 | 813 | 23 | 805 | 0.0 | 927 |
| Msa0415610 | MtrunA17_Chr6g0481241 | 64.130 | 184 | 44 | 1 | 639 | 822 | 1 | 162 | 1.43e-75 | 245 |
| Msa0415610 | MtrunA17_Chr6g0481261 | 83.333 | 102 | 17 | 0 | 639 | 740 | 1 | 102 | 7.79e-56 | 187 |
| Msa0415610 | MtrunA17_Chr5g0443091 | 27.027 | 555 | 321 | 21 | 286 | 787 | 171 | 694 | 3.74e-40 | 160 |
| Msa0415610 | MtrunA17_Chr4g0064501 | 27.306 | 542 | 312 | 20 | 286 | 779 | 168 | 675 | 3.05e-39 | 157 |
| Msa0415610 | MtrunA17_Chr3g0096241 | 26.104 | 521 | 326 | 17 | 286 | 769 | 167 | 665 | 5.06e-38 | 153 |
| Msa0415610 | MtrunA17_Chr6g0481151 | 76.712 | 73 | 17 | 0 | 569 | 641 | 24 | 96 | 2.31e-32 | 121 |
| Msa0415610 | MtrunA17_Chr4g0009181 | 62.338 | 77 | 26 | 2 | 1 | 76 | 3 | 77 | 4.23e-23 | 94.0 |
| Msa0415610 | MtrunA17_Chr6g0481161 | 86.364 | 44 | 6 | 0 | 691 | 734 | 1 | 44 | 9.97e-22 | 89.0 |
| Msa0415610 | MtrunA17_Chr6g0481271 | 45.455 | 66 | 34 | 1 | 771 | 834 | 1 | 66 | 1.32e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415610 | AT1G73370.3 | 69.902 | 814 | 242 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1221 |
| Msa0415610 | AT1G73370.1 | 69.902 | 814 | 242 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1221 |
| Msa0415610 | AT5G37180.1 | 71.033 | 794 | 225 | 2 | 21 | 813 | 13 | 802 | 0.0 | 1202 |
| Msa0415610 | AT1G73370.2 | 71.429 | 770 | 220 | 0 | 46 | 815 | 1 | 770 | 0.0 | 1180 |
| Msa0415610 | AT5G37180.2 | 74.919 | 614 | 154 | 0 | 200 | 813 | 1 | 614 | 0.0 | 993 |
| Msa0415610 | AT4G02280.1 | 57.377 | 793 | 337 | 1 | 22 | 814 | 18 | 809 | 0.0 | 971 |
| Msa0415610 | AT5G49190.1 | 55.233 | 793 | 354 | 1 | 22 | 814 | 15 | 806 | 0.0 | 929 |
| Msa0415610 | AT5G49190.2 | 55.769 | 780 | 344 | 1 | 35 | 814 | 18 | 796 | 0.0 | 924 |
| Msa0415610 | AT3G43190.2 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 917 |
| Msa0415610 | AT3G43190.1 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 917 |
| Msa0415610 | AT5G37180.3 | 76.439 | 556 | 131 | 0 | 258 | 813 | 1 | 556 | 0.0 | 917 |
| Msa0415610 | AT5G20830.3 | 56.959 | 776 | 326 | 5 | 41 | 814 | 39 | 808 | 0.0 | 913 |
| Msa0415610 | AT5G20830.2 | 56.959 | 776 | 326 | 5 | 41 | 814 | 39 | 808 | 0.0 | 913 |
| Msa0415610 | AT5G20830.1 | 56.959 | 776 | 326 | 5 | 41 | 814 | 39 | 808 | 0.0 | 913 |
| Msa0415610 | AT5G49190.3 | 57.781 | 739 | 311 | 1 | 76 | 814 | 3 | 740 | 0.0 | 911 |
| Msa0415610 | AT1G04920.1 | 27.455 | 550 | 326 | 21 | 286 | 790 | 172 | 693 | 1.41e-38 | 155 |
| Msa0415610 | AT5G11110.1 | 27.726 | 541 | 315 | 19 | 286 | 784 | 177 | 683 | 1.42e-38 | 155 |
| Msa0415610 | AT5G20280.1 | 26.568 | 542 | 333 | 19 | 286 | 786 | 170 | 687 | 1.55e-37 | 152 |
| Msa0415610 | AT4G10120.4 | 26.755 | 527 | 311 | 18 | 286 | 770 | 23 | 516 | 3.35e-36 | 147 |
| Msa0415610 | AT4G10120.2 | 26.465 | 529 | 310 | 19 | 286 | 770 | 197 | 690 | 4.81e-36 | 147 |
| Msa0415610 | AT4G10120.3 | 26.465 | 529 | 310 | 19 | 286 | 770 | 197 | 690 | 4.81e-36 | 147 |
| Msa0415610 | AT4G10120.1 | 26.465 | 529 | 310 | 19 | 286 | 770 | 197 | 690 | 4.81e-36 | 147 |
| Msa0415610 | AT4G10120.5 | 26.482 | 506 | 299 | 16 | 305 | 770 | 17 | 489 | 1.10e-34 | 142 |
Find 178 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCTTATGTTTAAGAATT+TGG | 0.104517 | 3_2:-61912480 | Msa0415610:intron |
| TGCAAACAAGTTGCTGAATA+TGG | 0.128055 | 3_2:-61912579 | Msa0415610:CDS |
| TTCTCTATTCATGGTTATTT+TGG | 0.154276 | 3_2:-61915132 | Msa0415610:CDS |
| ATTACTGTTGATGGTGTTTC+TGG | 0.165228 | 3_2:-61912852 | Msa0415610:CDS |
| AATGCACTTGAAGCAGATTT+TGG | 0.198635 | 3_2:-61915877 | Msa0415610:CDS |
| CTTGCCATTGAGAAGATTAT+AGG | 0.209492 | 3_2:+61913242 | None:intergenic |
| TATCTTTGCTTTGCCACTTT+TGG | 0.224921 | 3_2:+61912518 | None:intergenic |
| ATTCAAGATATTGTATATAT+TGG | 0.234315 | 3_2:+61916830 | None:intergenic |
| AAATTACACTGATGGGAATT+TGG | 0.244255 | 3_2:-61914112 | Msa0415610:CDS |
| GGACTATGCAGAGTTGTTTC+AGG | 0.262656 | 3_2:-61913537 | Msa0415610:CDS |
| AATTTCATGGCTTCTGCATC+AGG | 0.262953 | 3_2:-61916810 | Msa0415610:exon |
| AGGTAATCGGTTGATGTTAT+AGG | 0.265521 | 3_2:+61916065 | None:intergenic |
| ATACAATATCTTGAATTTCA+TGG | 0.278796 | 3_2:-61916823 | Msa0415610:exon |
| ATATTTGATTCCTATCATTC+TGG | 0.280201 | 3_2:+61916622 | None:intergenic |
| GTTGTGATCTTCTCTATTCA+TGG | 0.282418 | 3_2:-61915141 | Msa0415610:CDS |
| TTAAAATTGCCTTCTTCAAT+TGG | 0.283903 | 3_2:-61915829 | Msa0415610:CDS |
| TTAAGAACTTTGAAACAAAA+TGG | 0.290010 | 3_2:+61915797 | None:intergenic |
| CCTTGGTTCAAAATCATCAT+AGG | 0.298372 | 3_2:+61915386 | None:intergenic |
| AATTGAAGGGTCAGTTTAGA+TGG | 0.312260 | 3_2:-61913046 | Msa0415610:CDS |
| CAAATATTGGAAGGCAATCT+TGG | 0.312412 | 3_2:-61916606 | Msa0415610:CDS |
| TATAATAAATCTTCAATTGT+AGG | 0.319514 | 3_2:+61913411 | None:intergenic |
| GTTACCTGTCCGCCGGTATC+TGG | 0.321700 | 3_2:+61915087 | None:intergenic |
| GGCAAAGACACAACCTATAT+TGG | 0.326803 | 3_2:-61915752 | Msa0415610:CDS |
| TAAGGCCAGACCCTGGAGTT+TGG | 0.328183 | 3_2:-61916127 | Msa0415610:CDS |
| TTGCCTTCTTCAATTGGAAA+TGG | 0.328203 | 3_2:-61915823 | Msa0415610:CDS |
| GAATTTGGCAGCTTCTCTTA+TGG | 0.328254 | 3_2:-61914097 | Msa0415610:CDS |
| GGAAAACCAGATCTCATTAT+AGG | 0.331613 | 3_2:-61914135 | Msa0415610:CDS |
| TTTGGTCAAGCAGATGTTCT+TGG | 0.337396 | 3_2:-61915114 | Msa0415610:CDS |
| GAGAAGAGATGGCAGAAATA+AGG | 0.340112 | 3_2:-61913097 | Msa0415610:CDS |
| TTCCAATTCCTGATTGCATT+TGG | 0.342271 | 3_2:+61914448 | None:intergenic |
| TTCCTTGAATTTGAGGTAAT+CGG | 0.343680 | 3_2:+61916052 | None:intergenic |
| TGAACAGGTAGTTTACATAT+TGG | 0.345797 | 3_2:-61914683 | Msa0415610:intron |
| CCTGCTTTGTATGAAGCATT+TGG | 0.348320 | 3_2:-61912945 | Msa0415610:CDS |
| ATATTCTTTCCTTGAATTTG+AGG | 0.349412 | 3_2:+61916045 | None:intergenic |
| CATTTGGTTCCTTGAGCATC+AGG | 0.353289 | 3_2:+61914464 | None:intergenic |
| CATCATAACTAGCACATATC+AGG | 0.355198 | 3_2:-61913779 | Msa0415610:CDS |
| TTCTCCATGTTCATTGGATC+TGG | 0.357587 | 3_2:+61915195 | None:intergenic |
| TTTGCTACTGCAGGCGTTCA+AGG | 0.369565 | 3_2:-61912135 | Msa0415610:intron |
| AACCAAATGCAATCAGGAAT+TGG | 0.378445 | 3_2:-61914450 | Msa0415610:CDS |
| AGAAATGGAGCAAGTTATAA+AGG | 0.380139 | 3_2:-61916646 | Msa0415610:CDS |
| CTACTCTGCTTCGTTGCATC+TGG | 0.382130 | 3_2:+61916744 | None:intergenic |
| TCATGATTTGATGGAAGAAA+TGG | 0.387496 | 3_2:-61916661 | Msa0415610:CDS |
| GAATGATAGGAATCAAATAT+TGG | 0.388211 | 3_2:-61916619 | Msa0415610:CDS |
| TCACCAAATTCTTAAACATA+AGG | 0.390237 | 3_2:+61912477 | None:intergenic |
| AAGGCCAGACCCTGGAGTTT+GGG | 0.391013 | 3_2:-61916126 | Msa0415610:CDS |
| GGTTGTTGAGGTTCATCAAT+TGG | 0.407027 | 3_2:+61912366 | None:intergenic |
| GTGAACCTTGTCATAGTTGG+AGG | 0.408099 | 3_2:-61913149 | Msa0415610:CDS |
| CATAAAAGTTCATGATTTGA+TGG | 0.411962 | 3_2:-61916670 | Msa0415610:CDS |
| TGGCAAAGCAAAGATACATT+TGG | 0.414762 | 3_2:-61912511 | Msa0415610:CDS |
| TGTAAGGAAAATAGACAGTT+TGG | 0.415507 | 3_2:+61913466 | None:intergenic |
| GATAACAAGTAGTCCAATAT+AGG | 0.417385 | 3_2:+61915739 | None:intergenic |
| TCTACCTTTCTCAAGGTACT+TGG | 0.421092 | 3_2:+61916698 | None:intergenic |
| AGCACATATCAGGAAATTGC+TGG | 0.421222 | 3_2:-61913769 | Msa0415610:CDS |
| TGTTCATTGGATCTGGAGCT+TGG | 0.422689 | 3_2:+61915202 | None:intergenic |
| TCACTTCTCATGTCAATTCA+TGG | 0.423608 | 3_2:-61913833 | Msa0415610:CDS |
| GAGACTCTGCTGCTTGGAGT+TGG | 0.425685 | 3_2:+61912338 | None:intergenic |
| CTCCATTGAGAGGATCGATA+TGG | 0.425897 | 3_2:+61912826 | None:intergenic |
| TTATAAAGGACCAGAATGAT+AGG | 0.436409 | 3_2:-61916632 | Msa0415610:CDS |
| GCGTTCAAGGTCCAGATCAC+AGG | 0.438873 | 3_2:-61912122 | Msa0415610:CDS |
| CGATTTATTGCCGACACAAA+GGG | 0.445300 | 3_2:-61912981 | Msa0415610:CDS |
| GAAGCTTTGCAACTGAGCTC+AGG | 0.445828 | 3_2:+61915463 | None:intergenic |
| TAATTTCCTATAATGAGATC+TGG | 0.449484 | 3_2:+61914129 | None:intergenic |
| AAACATACCACAAGAATTTG+AGG | 0.450197 | 3_2:+61914595 | None:intergenic |
| TGACATGAGAAGTGATACTT+AGG | 0.450801 | 3_2:+61913841 | None:intergenic |
| ATTGGATCAAGTGAGAGCTT+TGG | 0.450839 | 3_2:-61914665 | Msa0415610:CDS |
| CATTCATAGGTTTAAGCAGT+GGG | 0.453853 | 3_2:-61915295 | Msa0415610:intron |
| ATAAAGGAATCCTGCGTCAA+TGG | 0.454020 | 3_2:-61914373 | Msa0415610:CDS |
| CTCTTATGGCTAGCAAACTT+AGG | 0.458904 | 3_2:-61914083 | Msa0415610:CDS |
| CATATGTTGCCTTTGCAGTA+AGG | 0.461366 | 3_2:-61916145 | Msa0415610:CDS |
| GCCATACCATTCGACTAAAC+CGG | 0.464737 | 3_2:+61913196 | None:intergenic |
| TTGATCTTAACCCTGTGATC+TGG | 0.465172 | 3_2:+61912111 | None:intergenic |
| GTTCTTGGCTTGCCAGATAC+CGG | 0.467570 | 3_2:-61915099 | Msa0415610:CDS |
| CCAGCGGAAATTACTGTTGA+TGG | 0.471975 | 3_2:-61912861 | Msa0415610:CDS |
| TGGCAAAACACCCCTTCATA+TGG | 0.472121 | 3_2:+61916718 | None:intergenic |
| GCAAACAAGTTGCTGAATAT+GGG | 0.473370 | 3_2:-61912578 | Msa0415610:CDS |
| TTGGTGAACCTTGTCATAGT+TGG | 0.474389 | 3_2:-61913152 | Msa0415610:CDS |
| GCATGACTTTCATATTGTCC+AGG | 0.475326 | 3_2:+61913576 | None:intergenic |
| ATCACAACATTGAATATTGT+GGG | 0.477811 | 3_2:+61915156 | None:intergenic |
| TCAAGGAACCAAATGCAATC+AGG | 0.478957 | 3_2:-61914456 | Msa0415610:CDS |
| GATGTTGTGAAGAACATAAC+CGG | 0.480452 | 3_2:-61913215 | Msa0415610:CDS |
| AACCGATTACCTCAAATTCA+AGG | 0.481703 | 3_2:-61916054 | Msa0415610:CDS |
| AATTGAAAAGTATCAATTGA+AGG | 0.483871 | 3_2:-61913060 | Msa0415610:CDS |
| TAAAGGAATCCTGCGTCAAT+GGG | 0.485877 | 3_2:-61914372 | Msa0415610:CDS |
| GATCACAACATTGAATATTG+TGG | 0.486777 | 3_2:+61915155 | None:intergenic |
| TGCTGCTTGGAGTTGGACAC+TGG | 0.491085 | 3_2:+61912345 | None:intergenic |
| TTCCATATCGATCCTCTCAA+TGG | 0.492417 | 3_2:-61912828 | Msa0415610:CDS |
| AAAACCTATAATCTTCTCAA+TGG | 0.494217 | 3_2:-61913246 | Msa0415610:CDS |
| ATTCCTTTATCCGTCTGAAA+AGG | 0.495407 | 3_2:+61914386 | None:intergenic |
| GACTATGCAGAGTTGTTTCA+GGG | 0.497122 | 3_2:-61913536 | Msa0415610:CDS |
| TTTACATATTCCCAAACTCC+AGG | 0.498127 | 3_2:+61916116 | None:intergenic |
| GAACAAAAGGTTGAGAAGCT+TGG | 0.499509 | 3_2:-61913171 | Msa0415610:CDS |
| GAAACAACTCTGCATAGTCC+TGG | 0.499572 | 3_2:+61913540 | None:intergenic |
| TATTCCCAAACTCCAGGGTC+TGG | 0.501451 | 3_2:+61916122 | None:intergenic |
| AGTACCTTGAGAAAGGTAGA+AGG | 0.502369 | 3_2:-61916695 | Msa0415610:CDS |
| GAGTGCTTGGTGTCAAGGAT+TGG | 0.503252 | 3_2:+61914425 | None:intergenic |
| AATGGTATGGCAAGAACAAA+AGG | 0.505067 | 3_2:-61913184 | Msa0415610:CDS |
| ATCAAAAGACAGAGAAGAGA+TGG | 0.505369 | 3_2:-61913108 | Msa0415610:CDS |
| CTCTCCATTGCGATGTCTAT+CGG | 0.511081 | 3_2:+61913010 | None:intergenic |
| CTTACTGCAAAGGCAACATA+TGG | 0.514465 | 3_2:+61916146 | None:intergenic |
| ATTGAAAAGTATCAATTGAA+GGG | 0.514770 | 3_2:-61913059 | Msa0415610:CDS |
| AGGGTTAAGATCAAGTATAC+AGG | 0.517639 | 3_2:-61912102 | Msa0415610:exon |
| ATTATAGGAAATTACACTGA+TGG | 0.519428 | 3_2:-61914120 | Msa0415610:CDS |
| GCAGAGTAGGTACCATATGA+AGG | 0.520501 | 3_2:-61916730 | Msa0415610:CDS |
| TCATCATAGGGAGTATCCAC+TGG | 0.521258 | 3_2:+61915399 | None:intergenic |
| CAGCAGAGTCTCAGAAAACA+AGG | 0.523143 | 3_2:-61912327 | Msa0415610:CDS |
| TTTGCCAAGTACCTTGAGAA+AGG | 0.524246 | 3_2:-61916702 | Msa0415610:CDS |
| CTTGCCAGATACCGGCGGAC+AGG | 0.524415 | 3_2:-61915091 | Msa0415610:intron |
| TAGACAGTTTGGTCAGCTCC+AGG | 0.525465 | 3_2:+61913477 | None:intergenic |
| AGTCCATTTCCAATTGAAGA+AGG | 0.532379 | 3_2:+61915820 | None:intergenic |
| AGTGAATAATGAACCAAAAG+TGG | 0.533551 | 3_2:-61912531 | Msa0415610:CDS |
| CTTGGTTCAAAATCATCATA+GGG | 0.534597 | 3_2:+61915387 | None:intergenic |
| AACTAAGATTCTCAACCTCA+TGG | 0.538311 | 3_2:-61914160 | Msa0415610:CDS |
| TGATCCTTCTACCTTTCTCA+AGG | 0.540900 | 3_2:+61916691 | None:intergenic |
| CTTGATTCGTCTCCATTGAG+AGG | 0.541337 | 3_2:+61912816 | None:intergenic |
| TTATAGGAAATTACACTGAT+GGG | 0.541486 | 3_2:-61914119 | Msa0415610:CDS |
| TGAGTAAACCTCTCAAGATA+AGG | 0.545448 | 3_2:+61914329 | None:intergenic |
| TGGAACATGATTTCAGCGGC+AGG | 0.548654 | 3_2:-61912744 | Msa0415610:CDS |
| CCAAATGCTTCATACAAAGC+AGG | 0.548728 | 3_2:+61912945 | None:intergenic |
| TTATCTTGAGAGGTTTACTC+AGG | 0.550480 | 3_2:-61914327 | Msa0415610:intron |
| ACATCTATCCTTATCTTGAG+AGG | 0.550919 | 3_2:-61914337 | Msa0415610:CDS |
| GATAGGAATCAAATATTGGA+AGG | 0.559030 | 3_2:-61916615 | Msa0415610:CDS |
| ATTTCATGGCTTCTGCATCA+GGG | 0.561950 | 3_2:-61916809 | Msa0415610:exon |
| ATGAAGATTCAGATGTCAAG+TGG | 0.562035 | 3_2:-61913876 | Msa0415610:CDS |
| ACATAACCGGTTTAGTCGAA+TGG | 0.563404 | 3_2:-61913202 | Msa0415610:CDS |
| GATTGCAGCGTATTAATGAA+TGG | 0.564848 | 3_2:-61912722 | Msa0415610:intron |
| AAGTTCAACATAGCTGCACC+TGG | 0.564919 | 3_2:-61913495 | Msa0415610:CDS |
| CTCAGTTGCAAAGCTTCAGA+TGG | 0.565623 | 3_2:-61915457 | Msa0415610:CDS |
| GAGTTGGACACTGGTTGTTG+AGG | 0.566263 | 3_2:+61912354 | None:intergenic |
| CTATAATCTTCTCAATGGCA+AGG | 0.572371 | 3_2:-61913241 | Msa0415610:CDS |
| ATAAATCTTCAATTGTAGGA+TGG | 0.578371 | 3_2:+61913415 | None:intergenic |
| AAGATTCTCAACCTCATGGA+AGG | 0.580091 | 3_2:-61914156 | Msa0415610:CDS |
| AGGGTCTGGCCTTACTGCAA+AGG | 0.580872 | 3_2:+61916136 | None:intergenic |
| TAGAAATGTTACCTGTCCGC+CGG | 0.582278 | 3_2:+61915080 | None:intergenic |
| CAGAGTAGGTACCATATGAA+GGG | 0.583018 | 3_2:-61916729 | Msa0415610:CDS |
| CCATGGTTAGTAGCAAAAGT+TGG | 0.583413 | 3_2:+61912888 | None:intergenic |
| AAACAACTCTGCATAGTCCT+GGG | 0.585010 | 3_2:+61913541 | None:intergenic |
| TCGATTTATTGCCGACACAA+AGG | 0.585397 | 3_2:-61912982 | Msa0415610:CDS |
| CCATCAACAGTAATTTCCGC+TGG | 0.588157 | 3_2:+61912861 | None:intergenic |
| ACCGGTTTAGTCGAATGGTA+TGG | 0.588404 | 3_2:-61913197 | Msa0415610:CDS |
| TCAGAAAACAAGGAACAAGC+AGG | 0.590337 | 3_2:-61912317 | Msa0415610:intron |
| AAGCTTTGCAACTGAGCTCA+GGG | 0.590368 | 3_2:+61915464 | None:intergenic |
| CATGCAGCATTTACACTCCC+AGG | 0.590865 | 3_2:-61913558 | Msa0415610:CDS |
| CAGATGCAACGAAGCAGAGT+AGG | 0.591388 | 3_2:-61916743 | Msa0415610:CDS |
| ACTGCAAAGGCAACATATGG+TGG | 0.591779 | 3_2:+61916149 | None:intergenic |
| TTGTTATCACTAAATCATCA+AGG | 0.594692 | 3_2:-61915724 | Msa0415610:CDS |
| AGCTCCAGATCCAATGAACA+TGG | 0.595996 | 3_2:-61915199 | Msa0415610:CDS |
| GTTTGCAGCAAAGATAAACC+TGG | 0.596368 | 3_2:-61913594 | Msa0415610:intron |
| AGTGGATGGGGAGATACTGC+AGG | 0.599037 | 3_2:-61915264 | Msa0415610:CDS |
| AGATACTGCAGGAAGAGTGA+AGG | 0.602197 | 3_2:-61915253 | Msa0415610:CDS |
| AGCGAGAAACCCATTGACGC+AGG | 0.603079 | 3_2:+61914363 | None:intergenic |
| TTACATATTCCCAAACTCCA+GGG | 0.604096 | 3_2:+61916117 | None:intergenic |
| CGTTCAAGGTCCAGATCACA+GGG | 0.611161 | 3_2:-61912121 | Msa0415610:CDS |
| TTTGCAGTAAGGCCAGACCC+TGG | 0.611570 | 3_2:-61916134 | Msa0415610:CDS |
| GTAAAGTGGATTCGACACAT+TGG | 0.612673 | 3_2:-61912764 | Msa0415610:CDS |
| AGTGAATCCTCAAATTCTTG+TGG | 0.613261 | 3_2:-61914602 | Msa0415610:intron |
| GGTGCAGCTATGTTGAACTT+CGG | 0.617054 | 3_2:+61913498 | None:intergenic |
| TCATTCATAGGTTTAAGCAG+TGG | 0.617554 | 3_2:-61915296 | Msa0415610:intron |
| TACTAACCATGGTGGTCCAG+CGG | 0.618133 | 3_2:-61912877 | Msa0415610:CDS |
| TATCCACTGGAAGTGCTGAA+AGG | 0.620301 | 3_2:+61915412 | None:intergenic |
| AGGCTCATACCTGATGCTCA+AGG | 0.620828 | 3_2:-61914473 | Msa0415610:CDS |
| GACATGAGAAGTGATACTTA+GGG | 0.623045 | 3_2:+61913842 | None:intergenic |
| CACAAAAGCTCCCTTTGTGT+CGG | 0.624836 | 3_2:+61912971 | None:intergenic |
| GCTTCAGATGGCACTAACAG+TGG | 0.628405 | 3_2:-61915445 | Msa0415610:CDS |
| TAGCAAACTTAGGATAACTC+AGG | 0.631639 | 3_2:-61914073 | Msa0415610:intron |
| CTACTTAGAATTAAGCAACA+AGG | 0.635085 | 3_2:-61914631 | Msa0415610:CDS |
| CTTGGCTTGCCAGATACCGG+CGG | 0.648157 | 3_2:-61915096 | Msa0415610:CDS |
| ATACAGTAAAGTTGATAACA+AGG | 0.652323 | 3_2:-61913391 | Msa0415610:CDS |
| CATATCAGGAAATTGCTGGA+AGG | 0.653215 | 3_2:-61913765 | Msa0415610:intron |
| ATTCCTTTCAGCACTTCCAG+TGG | 0.655307 | 3_2:-61915415 | Msa0415610:CDS |
| AGAGTAGGTACCATATGAAG+GGG | 0.660385 | 3_2:-61916728 | Msa0415610:CDS |
| ACATTGGAACATGATTTCAG+CGG | 0.663048 | 3_2:-61912748 | Msa0415610:CDS |
| GTTGACAATGATAGGTCACA+AGG | 0.672933 | 3_2:-61914493 | Msa0415610:intron |
| ATTCATAGGTTTAAGCAGTG+GGG | 0.679591 | 3_2:-61915294 | Msa0415610:intron |
| GAGGTTGAGAATCTTAGTTG+TGG | 0.682574 | 3_2:+61914164 | None:intergenic |
| CAGACCGATAGACATCGCAA+TGG | 0.696451 | 3_2:-61913014 | Msa0415610:CDS |
| TAATTTCCGCTGGACCACCA+TGG | 0.697345 | 3_2:+61912871 | None:intergenic |
| GTCATTGAAGCAATGAACTG+TGG | 0.698242 | 3_2:-61912915 | Msa0415610:CDS |
| AGAAGCCTCCAACTATGACA+AGG | 0.698799 | 3_2:+61913144 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTATTCATTTGTT+CGG | - | chr3_2:61912391-61912410 | Msa0415610:intron | 10.0% |
| !! | ATTCAAGATATTGTATATAT+TGG | + | chr3_2:61911981-61912000 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTCATTTGTTC+GGG | - | chr3_2:61912392-61912411 | Msa0415610:intron | 15.0% |
| !! | TAATAAGAAAAAAAGTTAGT+TGG | - | chr3_2:61912465-61912484 | Msa0415610:intron | 15.0% |
| !! | TATAATAAATCTTCAATTGT+AGG | + | chr3_2:61915400-61915419 | None:intergenic | 15.0% |
| !! | ATACAATATCTTGAATTTCA+TGG | - | chr3_2:61911985-61912004 | Msa0415610:three_prime_UTR | 20.0% |
| !! | CAACAAAAAAAAATGCAAAT+TGG | + | chr3_2:61912266-61912285 | None:intergenic | 20.0% |
| !! | TCGATAATAATTTAAGAGAA+TGG | + | chr3_2:61912561-61912580 | None:intergenic | 20.0% |
| !!! | AAAAGTACAGTATAAGTAAA+AGG | + | chr3_2:61912811-61912830 | None:intergenic | 20.0% |
| !!! | GATTAGACAACAATTTTTAA+TGG | - | chr3_2:61912873-61912892 | Msa0415610:CDS | 20.0% |
| !!! | ACAATTTTTAATGGTTAACT+TGG | - | chr3_2:61912882-61912901 | Msa0415610:CDS | 20.0% |
| !!! | CAATTTTTAATGGTTAACTT+GGG | - | chr3_2:61912883-61912902 | Msa0415610:CDS | 20.0% |
| !!! | TTAAGAACTTTGAAACAAAA+TGG | + | chr3_2:61913014-61913033 | None:intergenic | 20.0% |
| !!! | GTAATTTTGTAATGTACTTT+TGG | - | chr3_2:61913267-61913286 | Msa0415610:CDS | 20.0% |
| !! | TAAACCTATGAATGAAAAAT+AGG | + | chr3_2:61913507-61913526 | None:intergenic | 20.0% |
| !! | CAAGTTTATTATGTATAGAA+AGG | + | chr3_2:61914259-61914278 | None:intergenic | 20.0% |
| !!! | ACTATTCTTTTATTGAAACT+TGG | - | chr3_2:61914760-61914779 | Msa0415610:intron | 20.0% |
| !!! | CTATTCTTTTATTGAAACTT+GGG | - | chr3_2:61914761-61914780 | Msa0415610:intron | 20.0% |
| !!! | AAATTGAAGAAACTTTGAAA+AGG | - | chr3_2:61915156-61915175 | Msa0415610:CDS | 20.0% |
| !!! | AATTGAAAAGTATCAATTGA+AGG | - | chr3_2:61915748-61915767 | Msa0415610:CDS | 20.0% |
| !!! | ATTGAAAAGTATCAATTGAA+GGG | - | chr3_2:61915749-61915768 | Msa0415610:CDS | 20.0% |
| !!! | TTTCTTTGAAAAATGTAAAG+TGG | - | chr3_2:61916030-61916049 | Msa0415610:intron | 20.0% |
| !! | TAACCTTATGTTTAAGAATT+TGG | - | chr3_2:61916328-61916347 | Msa0415610:intron | 20.0% |
| ! | CATAAAAGTTCATGATTTGA+TGG | - | chr3_2:61912138-61912157 | Msa0415610:intron | 25.0% |
| ! | ATATTTGATTCCTATCATTC+TGG | + | chr3_2:61912189-61912208 | None:intergenic | 25.0% |
| ! | GAATGATAGGAATCAAATAT+TGG | - | chr3_2:61912189-61912208 | Msa0415610:intron | 25.0% |
| !! | CTTCTTATTAAGTTTTACAC+AGG | - | chr3_2:61912225-61912244 | Msa0415610:intron | 25.0% |
| !! | ACACTAACATGCTTTTATAT+TGG | - | chr3_2:61912321-61912340 | Msa0415610:CDS | 25.0% |
| !! | CATATTGCTTTAGATGTATT+CGG | - | chr3_2:61912494-61912513 | Msa0415610:CDS | 25.0% |
| ! | CTAGTATGTCATTGTTTAAT+AGG | - | chr3_2:61912588-61912607 | Msa0415610:CDS | 25.0% |
| ! | AATAGGCTTATTACTCAATA+TGG | - | chr3_2:61912605-61912624 | Msa0415610:intron | 25.0% |
| ! | ATATTCTTTCCTTGAATTTG+AGG | + | chr3_2:61912766-61912785 | None:intergenic | 25.0% |
| ! | AAAGAATATACGACCAAAAA+TGG | - | chr3_2:61912777-61912796 | Msa0415610:CDS | 25.0% |
| ! | TGTTGTCTAATCATTGAAAA+AGG | + | chr3_2:61912865-61912884 | None:intergenic | 25.0% |
| ! | TTAAAATTGCCTTCTTCAAT+TGG | - | chr3_2:61912979-61912998 | Msa0415610:CDS | 25.0% |
| !! | TTCTTAACTTTACGTTTTAG+TGG | - | chr3_2:61913027-61913046 | Msa0415610:CDS | 25.0% |
| !!! | TCTTAACTTTACGTTTTAGT+GGG | - | chr3_2:61913028-61913047 | Msa0415610:CDS | 25.0% |
| ! | TTGTTATCACTAAATCATCA+AGG | - | chr3_2:61913084-61913103 | Msa0415610:CDS | 25.0% |
| !!! | ATCTTTTATGTCATTTGAAC+TGG | - | chr3_2:61913299-61913318 | Msa0415610:intron | 25.0% |
| !!! | CAATCCTATTTTTCATTCAT+AGG | - | chr3_2:61913500-61913519 | Msa0415610:CDS | 25.0% |
| ! | ATCACAACATTGAATATTGT+GGG | + | chr3_2:61913655-61913674 | None:intergenic | 25.0% |
| !! | TTCTCTATTCATGGTTATTT+TGG | - | chr3_2:61913676-61913695 | Msa0415610:intron | 25.0% |
| ! | CAGAATTAATTCTACACATT+TGG | + | chr3_2:61913818-61913837 | None:intergenic | 25.0% |
| ! | CATCTAGTTAGAATCAATTA+TGG | + | chr3_2:61913879-61913898 | None:intergenic | 25.0% |
| ! | TGAAAGTAATGTGATATGTT+TGG | + | chr3_2:61913981-61914000 | None:intergenic | 25.0% |
| ! | TATATGTTGTTGACAATGAT+AGG | - | chr3_2:61914307-61914326 | Msa0415610:intron | 25.0% |
| ! | TAATTTCCTATAATGAGATC+TGG | + | chr3_2:61914682-61914701 | None:intergenic | 25.0% |
| ! | ATTATAGGAAATTACACTGA+TGG | - | chr3_2:61914688-61914707 | Msa0415610:intron | 25.0% |
| ! | TTATAGGAAATTACACTGAT+GGG | - | chr3_2:61914689-61914708 | Msa0415610:intron | 25.0% |
| ! | ATTAGTTCATGCATCAAAAA+AGG | + | chr3_2:61914855-61914874 | None:intergenic | 25.0% |
| ! | ATAAATCTTCAATTGTAGGA+TGG | + | chr3_2:61915396-61915415 | None:intergenic | 25.0% |
| !!! | ATACAGTAAAGTTGATAACA+AGG | - | chr3_2:61915417-61915436 | Msa0415610:CDS | 25.0% |
| ! | TAACATCAACAACAAAAGAA+TGG | + | chr3_2:61915466-61915485 | None:intergenic | 25.0% |
| !! | TGATTAATTTTCTCTTACAG+TGG | - | chr3_2:61915521-61915540 | Msa0415610:intron | 25.0% |
| ! | AAAACCTATAATCTTCTCAA+TGG | - | chr3_2:61915562-61915581 | Msa0415610:intron | 25.0% |
| !!! | CTTTTGTTTTCAGTTATACA+TGG | - | chr3_2:61916198-61916217 | Msa0415610:intron | 25.0% |
| ! | TCACCAAATTCTTAAACATA+AGG | + | chr3_2:61916334-61916353 | None:intergenic | 25.0% |
| ! | TTCTTATATGTAAATGTCAC+AGG | - | chr3_2:61916402-61916421 | Msa0415610:intron | 25.0% |
| !!! | AGGTTAATGTAGCTTATTTT+CGG | - | chr3_2:61916726-61916745 | Msa0415610:CDS | 25.0% |
| TCATGATTTGATGGAAGAAA+TGG | - | chr3_2:61912147-61912166 | Msa0415610:intron | 30.0% | |
| AGAAATGGAGCAAGTTATAA+AGG | - | chr3_2:61912162-61912181 | Msa0415610:intron | 30.0% | |
| TTATAAAGGACCAGAATGAT+AGG | - | chr3_2:61912176-61912195 | Msa0415610:intron | 30.0% | |
| GATAGGAATCAAATATTGGA+AGG | - | chr3_2:61912193-61912212 | Msa0415610:intron | 30.0% | |
| ! | TACATCTAAAGCAATATGGT+CGG | + | chr3_2:61912492-61912511 | None:intergenic | 30.0% |
| ! | CGAATACATCTAAAGCAATA+TGG | + | chr3_2:61912496-61912515 | None:intergenic | 30.0% |
| !! | ATATGGATTTTAATGCTTGC+AGG | - | chr3_2:61912622-61912641 | Msa0415610:intron | 30.0% |
| ! | TTCCTTGAATTTGAGGTAAT+CGG | + | chr3_2:61912759-61912778 | None:intergenic | 30.0% |
| ! | AAAGGACATAGTACCATTTT+TGG | + | chr3_2:61912793-61912812 | None:intergenic | 30.0% |
| ! | TTAACTTGGGTTTATGTTGT+AGG | - | chr3_2:61912896-61912915 | Msa0415610:CDS | 30.0% |
| TAACTTGGGTTTATGTTGTA+GGG | - | chr3_2:61912897-61912916 | Msa0415610:CDS | 30.0% | |
| !!! | GGCAATTTTAAGTTAGGAAT+AGG | + | chr3_2:61912970-61912989 | None:intergenic | 30.0% |
| !!! | GAAGAAGGCAATTTTAAGTT+AGG | + | chr3_2:61912976-61912995 | None:intergenic | 30.0% |
| !! | TTTACGTTTTAGTGGGAAAT+TGG | - | chr3_2:61913035-61913054 | Msa0415610:CDS | 30.0% |
| GATAACAAGTAGTCCAATAT+AGG | + | chr3_2:61913072-61913091 | None:intergenic | 30.0% | |
| !! | ATCACTGATTTCCAAAACAT+TGG | + | chr3_2:61913172-61913191 | None:intergenic | 30.0% |
| !! | GTACGTCATGTTCTAAAAAT+TGG | + | chr3_2:61913239-61913258 | None:intergenic | 30.0% |
| CTTGGTTCAAAATCATCATA+GGG | + | chr3_2:61913424-61913443 | None:intergenic | 30.0% | |
| AAAAACTTCTCCATGTTCAT+TGG | + | chr3_2:61913622-61913641 | None:intergenic | 30.0% | |
| GATCACAACATTGAATATTG+TGG | + | chr3_2:61913656-61913675 | None:intergenic | 30.0% | |
| !! | AATTTTGCCTCCTCTAAAAA+TGG | + | chr3_2:61913791-61913810 | None:intergenic | 30.0% |
| ! | AATTGATTCTAACTAGATGC+TGG | - | chr3_2:61913880-61913899 | Msa0415610:CDS | 30.0% |
| TTGGATGCATTCACTTAAAA+GGG | + | chr3_2:61913962-61913981 | None:intergenic | 30.0% | |
| TTTGGATGCATTCACTTAAA+AGG | + | chr3_2:61913963-61913982 | None:intergenic | 30.0% | |
| TGAACAGGTAGTTTACATAT+TGG | - | chr3_2:61914125-61914144 | Msa0415610:CDS | 30.0% | |
| CTACTTAGAATTAAGCAACA+AGG | - | chr3_2:61914177-61914196 | Msa0415610:intron | 30.0% | |
| AAACATACCACAAGAATTTG+AGG | + | chr3_2:61914216-61914235 | None:intergenic | 30.0% | |
| ATCCTACATTTGATGAGATA+TGG | - | chr3_2:61914540-61914559 | Msa0415610:intron | 30.0% | |
| GTGAAAATGCGTTTATAAGT+TGG | - | chr3_2:61914564-61914583 | Msa0415610:intron | 30.0% | |
| ! | AAAATGCGTTTATAAGTTGG+AGG | - | chr3_2:61914567-61914586 | Msa0415610:intron | 30.0% |
| ! | TTCTCTTATGACTAGTTCTT+CGG | - | chr3_2:61914605-61914624 | Msa0415610:CDS | 30.0% |
| AAATTACACTGATGGGAATT+TGG | - | chr3_2:61914696-61914715 | Msa0415610:intron | 30.0% | |
| GGTCACAAAAATTGTTGAAT+AGG | + | chr3_2:61914822-61914841 | None:intergenic | 30.0% | |
| ! | AACAATTTTTGTGACCCTTA+AGG | - | chr3_2:61914826-61914845 | Msa0415610:intron | 30.0% |
| !! | ATCAAAAAAGGCATCCTTAA+GGG | + | chr3_2:61914843-61914862 | None:intergenic | 30.0% |
| GATGCATGAACTAATAAATG+AGG | - | chr3_2:61914860-61914879 | Msa0415610:intron | 30.0% | |
| TGTAAGGAAAATAGACAGTT+TGG | + | chr3_2:61915345-61915364 | None:intergenic | 30.0% | |
| !!! | TCTCTGTCTTTTGATTTCAA+AGG | + | chr3_2:61915695-61915714 | None:intergenic | 30.0% |
| ! | CTAATCTAGAGCTAGTAAAT+TGG | + | chr3_2:61916127-61916146 | None:intergenic | 30.0% |
| AACATTGAATCAAGATTGCA+TGG | - | chr3_2:61916175-61916194 | Msa0415610:intron | 30.0% | |
| !!! | TGGGAAGCATTTATACTTTT+TGG | - | chr3_2:61916249-61916268 | Msa0415610:intron | 30.0% |
| !! | GAAGCATTTATACTTTTTGG+AGG | - | chr3_2:61916252-61916271 | Msa0415610:intron | 30.0% |
| AGTGAATAATGAACCAAAAG+TGG | - | chr3_2:61916277-61916296 | Msa0415610:intron | 30.0% | |
| ! | ATGTGATGAGAATTTGAGAT+AGG | - | chr3_2:61916373-61916392 | Msa0415610:intron | 30.0% |
| GTCAAAATTTCTCGATTGAT+TGG | + | chr3_2:61916525-61916544 | None:intergenic | 30.0% | |
| !! | TTAATGTAGCTTATTTTCGG+CGG | - | chr3_2:61916729-61916748 | Msa0415610:CDS | 30.0% |
| CAAATATTGGAAGGCAATCT+TGG | - | chr3_2:61912202-61912221 | Msa0415610:intron | 35.0% | |
| TTACATATTCCCAAACTCCA+GGG | + | chr3_2:61912694-61912713 | None:intergenic | 35.0% | |
| TTTACATATTCCCAAACTCC+AGG | + | chr3_2:61912695-61912714 | None:intergenic | 35.0% | |
| ! | AGGTAATCGGTTGATGTTAT+AGG | + | chr3_2:61912746-61912765 | None:intergenic | 35.0% |
| AACCGATTACCTCAAATTCA+AGG | - | chr3_2:61912754-61912773 | Msa0415610:CDS | 35.0% | |
| ! | AATGCACTTGAAGCAGATTT+TGG | - | chr3_2:61912931-61912950 | Msa0415610:CDS | 35.0% |
| TTGCCTTCTTCAATTGGAAA+TGG | - | chr3_2:61912985-61913004 | Msa0415610:CDS | 35.0% | |
| AGTCCATTTCCAATTGAAGA+AGG | + | chr3_2:61912991-61913010 | None:intergenic | 35.0% | |
| ! | ACACATGTACACCAATGTTT+TGG | - | chr3_2:61913158-61913177 | Msa0415610:CDS | 35.0% |
| GTTATGGTTCAATCACAGTT+CGG | - | chr3_2:61913212-61913231 | Msa0415610:CDS | 35.0% | |
| CCTTGGTTCAAAATCATCAT+AGG | + | chr3_2:61913425-61913444 | None:intergenic | 35.0% | |
| ! | CCTATGATGATTTTGAACCA+AGG | - | chr3_2:61913422-61913441 | Msa0415610:CDS | 35.0% |
| AAGTGCAAAGAGATTTACCT+TGG | + | chr3_2:61913442-61913461 | None:intergenic | 35.0% | |
| TCTCTTTGCACTTCATAAAG+TGG | - | chr3_2:61913449-61913468 | Msa0415610:CDS | 35.0% | |
| TCATTCATAGGTTTAAGCAG+TGG | - | chr3_2:61913512-61913531 | Msa0415610:CDS | 35.0% | |
| CATTCATAGGTTTAAGCAGT+GGG | - | chr3_2:61913513-61913532 | Msa0415610:CDS | 35.0% | |
| ATTCATAGGTTTAAGCAGTG+GGG | - | chr3_2:61913514-61913533 | Msa0415610:CDS | 35.0% | |
| GTTGTGATCTTCTCTATTCA+TGG | - | chr3_2:61913667-61913686 | Msa0415610:intron | 35.0% | |
| !! | GTGCTTAGTTCCATTTTTAG+AGG | - | chr3_2:61913778-61913797 | Msa0415610:CDS | 35.0% |
| !! | CTTAGTTCCATTTTTAGAGG+AGG | - | chr3_2:61913781-61913800 | Msa0415610:CDS | 35.0% |
| TGGATGCATTCACTTAAAAG+GGG | + | chr3_2:61913961-61913980 | None:intergenic | 35.0% | |
| ACATTCATTTAGCATGTGCT+TGG | + | chr3_2:61914072-61914091 | None:intergenic | 35.0% | |
| AAGCACATGCTAAATGAATG+TGG | - | chr3_2:61914071-61914090 | Msa0415610:intron | 35.0% | |
| ! | GCTTTTCTACAATCTTGAAC+AGG | - | chr3_2:61914110-61914129 | Msa0415610:CDS | 35.0% |
| AGTGAATCCTCAAATTCTTG+TGG | - | chr3_2:61914206-61914225 | Msa0415610:intron | 35.0% | |
| AACCAAATGCAATCAGGAAT+TGG | - | chr3_2:61914358-61914377 | Msa0415610:CDS | 35.0% | |
| TTCCAATTCCTGATTGCATT+TGG | + | chr3_2:61914363-61914382 | None:intergenic | 35.0% | |
| ATTCCTTTATCCGTCTGAAA+AGG | + | chr3_2:61914425-61914444 | None:intergenic | 35.0% | |
| ACATCTATCCTTATCTTGAG+AGG | - | chr3_2:61914471-61914490 | Msa0415610:CDS | 35.0% | |
| TGAGTAAACCTCTCAAGATA+AGG | + | chr3_2:61914482-61914501 | None:intergenic | 35.0% | |
| TTATCTTGAGAGGTTTACTC+AGG | - | chr3_2:61914481-61914500 | Msa0415610:CDS | 35.0% | |
| AGTTCTTCGGTTCATGTTAT+AGG | - | chr3_2:61914618-61914637 | Msa0415610:CDS | 35.0% | |
| AACTAAGATTCTCAACCTCA+TGG | - | chr3_2:61914648-61914667 | Msa0415610:CDS | 35.0% | |
| GGAAAACCAGATCTCATTAT+AGG | - | chr3_2:61914673-61914692 | Msa0415610:CDS | 35.0% | |
| TAGCAAACTTAGGATAACTC+AGG | - | chr3_2:61914735-61914754 | Msa0415610:intron | 35.0% | |
| !! | CATCAAAAAAGGCATCCTTA+AGG | + | chr3_2:61914844-61914863 | None:intergenic | 35.0% |
| ATGAAGATTCAGATGTCAAG+TGG | - | chr3_2:61914932-61914951 | Msa0415610:intron | 35.0% | |
| GACATGAGAAGTGATACTTA+GGG | + | chr3_2:61914969-61914988 | None:intergenic | 35.0% | |
| TGACATGAGAAGTGATACTT+AGG | + | chr3_2:61914970-61914989 | None:intergenic | 35.0% | |
| TCACTTCTCATGTCAATTCA+TGG | - | chr3_2:61914975-61914994 | Msa0415610:intron | 35.0% | |
| CATCATAACTAGCACATATC+AGG | - | chr3_2:61915029-61915048 | Msa0415610:intron | 35.0% | |
| ! | CTTTTGTCTTTCTCAGTGTA+AGG | + | chr3_2:61915361-61915380 | None:intergenic | 35.0% |
| CTTGCCATTGAGAAGATTAT+AGG | + | chr3_2:61915569-61915588 | None:intergenic | 35.0% | |
| CTATAATCTTCTCAATGGCA+AGG | - | chr3_2:61915567-61915586 | Msa0415610:intron | 35.0% | |
| GATGTTGTGAAGAACATAAC+CGG | - | chr3_2:61915593-61915612 | Msa0415610:intron | 35.0% | |
| AATGGTATGGCAAGAACAAA+AGG | - | chr3_2:61915624-61915643 | Msa0415610:intron | 35.0% | |
| ATCAAAAGACAGAGAAGAGA+TGG | - | chr3_2:61915700-61915719 | Msa0415610:intron | 35.0% | |
| AATTGAAGGGTCAGTTTAGA+TGG | - | chr3_2:61915762-61915781 | Msa0415610:CDS | 35.0% | |
| !! | ATTACTGTTGATGGTGTTTC+TGG | - | chr3_2:61915956-61915975 | Msa0415610:intron | 35.0% |
| ACATTGGAACATGATTTCAG+CGG | - | chr3_2:61916060-61916079 | Msa0415610:CDS | 35.0% | |
| GATTGCAGCGTATTAATGAA+TGG | - | chr3_2:61916086-61916105 | Msa0415610:CDS | 35.0% | |
| CAGCGTATTAATGAATGGTA+AGG | - | chr3_2:61916091-61916110 | Msa0415610:CDS | 35.0% | |
| TGCAAACAAGTTGCTGAATA+TGG | - | chr3_2:61916229-61916248 | Msa0415610:intron | 35.0% | |
| GCAAACAAGTTGCTGAATAT+GGG | - | chr3_2:61916230-61916249 | Msa0415610:intron | 35.0% | |
| !!! | TATCTTTGCTTTGCCACTTT+TGG | + | chr3_2:61916293-61916312 | None:intergenic | 35.0% |
| TGGCAAAGCAAAGATACATT+TGG | - | chr3_2:61916297-61916316 | Msa0415610:intron | 35.0% | |
| AGGGTTAAGATCAAGTATAC+AGG | - | chr3_2:61916706-61916725 | Msa0415610:CDS | 35.0% | |
| AATTTCATGGCTTCTGCATC+AGG | - | chr3_2:61911998-61912017 | Msa0415610:three_prime_UTR | 40.0% | |
| ATTTCATGGCTTCTGCATCA+GGG | - | chr3_2:61911999-61912018 | Msa0415610:three_prime_UTR | 40.0% | |
| CAGAGTAGGTACCATATGAA+GGG | - | chr3_2:61912079-61912098 | Msa0415610:three_prime_UTR | 40.0% | |
| AGAGTAGGTACCATATGAAG+GGG | - | chr3_2:61912080-61912099 | Msa0415610:three_prime_UTR | 40.0% | |
| TTTGCCAAGTACCTTGAGAA+AGG | - | chr3_2:61912106-61912125 | Msa0415610:exon | 40.0% | |
| ! | TCTACCTTTCTCAAGGTACT+TGG | + | chr3_2:61912113-61912132 | None:intergenic | 40.0% |
| AGTACCTTGAGAAAGGTAGA+AGG | - | chr3_2:61912113-61912132 | Msa0415610:exon | 40.0% | |
| TGATCCTTCTACCTTTCTCA+AGG | + | chr3_2:61912120-61912139 | None:intergenic | 40.0% | |
| CTTACTGCAAAGGCAACATA+TGG | + | chr3_2:61912665-61912684 | None:intergenic | 40.0% | |
| CATATGTTGCCTTTGCAGTA+AGG | - | chr3_2:61912663-61912682 | Msa0415610:intron | 40.0% | |
| GGCAAAGACACAACCTATAT+TGG | - | chr3_2:61913056-61913075 | Msa0415610:CDS | 40.0% | |
| TCAGAGAGACTTCTGAGTTA+TGG | - | chr3_2:61913196-61913215 | Msa0415610:CDS | 40.0% | |
| TTCTCCATGTTCATTGGATC+TGG | + | chr3_2:61913616-61913635 | None:intergenic | 40.0% | |
| TTTGGTCAAGCAGATGTTCT+TGG | - | chr3_2:61913694-61913713 | Msa0415610:intron | 40.0% | |
| !!! | TTAGCATGTGCTTGGTTTTG+CGG | + | chr3_2:61914064-61914083 | None:intergenic | 40.0% |
| ATTGGATCAAGTGAGAGCTT+TGG | - | chr3_2:61914143-61914162 | Msa0415610:CDS | 40.0% | |
| GTTGACAATGATAGGTCACA+AGG | - | chr3_2:61914315-61914334 | Msa0415610:intron | 40.0% | |
| TCAAGGAACCAAATGCAATC+AGG | - | chr3_2:61914352-61914371 | Msa0415610:CDS | 40.0% | |
| !!! | TTTTTGAGTGCTTGGTGTCA+AGG | + | chr3_2:61914391-61914410 | None:intergenic | 40.0% |
| !!! | GCGTAGAATTTTTGAGTGCT+TGG | + | chr3_2:61914399-61914418 | None:intergenic | 40.0% |
| ATAAAGGAATCCTGCGTCAA+TGG | - | chr3_2:61914435-61914454 | Msa0415610:CDS | 40.0% | |
| TAAAGGAATCCTGCGTCAAT+GGG | - | chr3_2:61914436-61914455 | Msa0415610:CDS | 40.0% | |
| CGCCATATCTCATCAAATGT+AGG | + | chr3_2:61914545-61914564 | None:intergenic | 40.0% | |
| GAGGTTGAGAATCTTAGTTG+TGG | + | chr3_2:61914647-61914666 | None:intergenic | 40.0% | |
| AAGATTCTCAACCTCATGGA+AGG | - | chr3_2:61914652-61914671 | Msa0415610:CDS | 40.0% | |
| GAATTTGGCAGCTTCTCTTA+TGG | - | chr3_2:61914711-61914730 | Msa0415610:intron | 40.0% | |
| CTCTTATGGCTAGCAAACTT+AGG | - | chr3_2:61914725-61914744 | Msa0415610:intron | 40.0% | |
| AATGAGGTTGCTTGAAAACC+AGG | - | chr3_2:61914876-61914895 | Msa0415610:intron | 40.0% | |
| ATGAGGTTGCTTGAAAACCA+GGG | - | chr3_2:61914877-61914896 | Msa0415610:intron | 40.0% | |
| AGCACATATCAGGAAATTGC+TGG | - | chr3_2:61915039-61915058 | Msa0415610:intron | 40.0% | |
| CATATCAGGAAATTGCTGGA+AGG | - | chr3_2:61915043-61915062 | Msa0415610:intron | 40.0% | |
| !! | TATCATCAGTGTCGACATGA+AGG | + | chr3_2:61915129-61915148 | None:intergenic | 40.0% |
| GTTTGCAGCAAAGATAAACC+TGG | - | chr3_2:61915214-61915233 | Msa0415610:CDS | 40.0% | |
| GCATGACTTTCATATTGTCC+AGG | + | chr3_2:61915235-61915254 | None:intergenic | 40.0% | |
| AAACAACTCTGCATAGTCCT+GGG | + | chr3_2:61915270-61915289 | None:intergenic | 40.0% | |
| ! | GACTATGCAGAGTTGTTTCA+GGG | - | chr3_2:61915272-61915291 | Msa0415610:CDS | 40.0% |
| ! | ACATAACCGGTTTAGTCGAA+TGG | - | chr3_2:61915606-61915625 | Msa0415610:intron | 40.0% |
| GAACAAAAGGTTGAGAAGCT+TGG | - | chr3_2:61915637-61915656 | Msa0415610:intron | 40.0% | |
| TTGGTGAACCTTGTCATAGT+TGG | - | chr3_2:61915656-61915675 | Msa0415610:intron | 40.0% | |
| GAGAAGAGATGGCAGAAATA+AGG | - | chr3_2:61915711-61915730 | Msa0415610:intron | 40.0% | |
| TCGATTTATTGCCGACACAA+AGG | - | chr3_2:61915826-61915845 | Msa0415610:CDS | 40.0% | |
| CGATTTATTGCCGACACAAA+GGG | - | chr3_2:61915827-61915846 | Msa0415610:CDS | 40.0% | |
| CCAAATGCTTCATACAAAGC+AGG | + | chr3_2:61915866-61915885 | None:intergenic | 40.0% | |
| ! | CCTGCTTTGTATGAAGCATT+TGG | - | chr3_2:61915863-61915882 | Msa0415610:CDS | 40.0% |
| GTCATTGAAGCAATGAACTG+TGG | - | chr3_2:61915893-61915912 | Msa0415610:CDS | 40.0% | |
| CCATGGTTAGTAGCAAAAGT+TGG | + | chr3_2:61915923-61915942 | None:intergenic | 40.0% | |
| ! | CCAACTTTTGCTACTAACCA+TGG | - | chr3_2:61915920-61915939 | Msa0415610:intron | 40.0% |
| ! | ACTTTTGCTACTAACCATGG+TGG | - | chr3_2:61915923-61915942 | Msa0415610:intron | 40.0% |
| TTCCATATCGATCCTCTCAA+TGG | - | chr3_2:61915980-61915999 | Msa0415610:intron | 40.0% | |
| ! | GTAAAGTGGATTCGACACAT+TGG | - | chr3_2:61916044-61916063 | Msa0415610:CDS | 40.0% |
| GGTTGTTGAGGTTCATCAAT+TGG | + | chr3_2:61916445-61916464 | None:intergenic | 40.0% | |
| TCAGAAAACAAGGAACAAGC+AGG | - | chr3_2:61916491-61916510 | Msa0415610:intron | 40.0% | |
| CCTGCAGTAGCAAAACAATA+GGG | + | chr3_2:61916667-61916686 | None:intergenic | 40.0% | |
| TTGATCTTAACCCTGTGATC+TGG | + | chr3_2:61916700-61916719 | None:intergenic | 40.0% | |
| GCAGAGTAGGTACCATATGA+AGG | - | chr3_2:61912078-61912097 | Msa0415610:three_prime_UTR | 45.0% | |
| TGGCAAAACACCCCTTCATA+TGG | + | chr3_2:61912093-61912112 | None:intergenic | 45.0% | |
| ACTGCAAAGGCAACATATGG+TGG | + | chr3_2:61912662-61912681 | None:intergenic | 45.0% | |
| AAGCTTTGCAACTGAGCTCA+GGG | + | chr3_2:61913347-61913366 | None:intergenic | 45.0% | |
| CTCAGTTGCAAAGCTTCAGA+TGG | - | chr3_2:61913351-61913370 | Msa0415610:intron | 45.0% | |
| ATTCCTTTCAGCACTTCCAG+TGG | - | chr3_2:61913393-61913412 | Msa0415610:CDS | 45.0% | |
| !! | TATCCACTGGAAGTGCTGAA+AGG | + | chr3_2:61913399-61913418 | None:intergenic | 45.0% |
| !! | TCATCATAGGGAGTATCCAC+TGG | + | chr3_2:61913412-61913431 | None:intergenic | 45.0% |
| !!! | AAGCAGTGGGGTTTTGAAAG+TGG | - | chr3_2:61913526-61913545 | Msa0415610:CDS | 45.0% |
| !!! | AGTGGGGTTTTGAAAGTGGA+TGG | - | chr3_2:61913530-61913549 | Msa0415610:CDS | 45.0% |
| !!! | GTGGGGTTTTGAAAGTGGAT+GGG | - | chr3_2:61913531-61913550 | Msa0415610:CDS | 45.0% |
| !!! | TGGGGTTTTGAAAGTGGATG+GGG | - | chr3_2:61913532-61913551 | Msa0415610:CDS | 45.0% |
| AGATACTGCAGGAAGAGTGA+AGG | - | chr3_2:61913555-61913574 | Msa0415610:CDS | 45.0% | |
| ! | TGTTCATTGGATCTGGAGCT+TGG | + | chr3_2:61913609-61913628 | None:intergenic | 45.0% |
| AGCTCCAGATCCAATGAACA+TGG | - | chr3_2:61913609-61913628 | Msa0415610:intron | 45.0% | |
| TAGAAATGTTACCTGTCCGC+CGG | + | chr3_2:61913731-61913750 | None:intergenic | 45.0% | |
| ! | CATTTGGTTCCTTGAGCATC+AGG | + | chr3_2:61914347-61914366 | None:intergenic | 45.0% |
| ! | GTGCCTTTTCAGACGGATAA+AGG | - | chr3_2:61914419-61914438 | Msa0415610:CDS | 45.0% |
| !!! | GATCTGGTTTTCCTTCCATG+AGG | + | chr3_2:61914666-61914685 | None:intergenic | 45.0% |
| ! | AAGCATGTGCTATTGTTCCC+TGG | + | chr3_2:61914897-61914916 | None:intergenic | 45.0% |
| GAAACAACTCTGCATAGTCC+TGG | + | chr3_2:61915271-61915290 | None:intergenic | 45.0% | |
| ! | GGACTATGCAGAGTTGTTTC+AGG | - | chr3_2:61915271-61915290 | Msa0415610:CDS | 45.0% |
| GGTGCAGCTATGTTGAACTT+CGG | + | chr3_2:61915313-61915332 | None:intergenic | 45.0% | |
| AAGTTCAACATAGCTGCACC+TGG | - | chr3_2:61915313-61915332 | Msa0415610:intron | 45.0% | |
| ! | ACCGGTTTAGTCGAATGGTA+TGG | - | chr3_2:61915611-61915630 | Msa0415610:intron | 45.0% |
| GCCATACCATTCGACTAAAC+CGG | + | chr3_2:61915615-61915634 | None:intergenic | 45.0% | |
| GTGAACCTTGTCATAGTTGG+AGG | - | chr3_2:61915659-61915678 | Msa0415610:intron | 45.0% | |
| AGAAGCCTCCAACTATGACA+AGG | + | chr3_2:61915667-61915686 | None:intergenic | 45.0% | |
| CTCTCCATTGCGATGTCTAT+CGG | + | chr3_2:61915801-61915820 | None:intergenic | 45.0% | |
| CACAAAAGCTCCCTTTGTGT+CGG | + | chr3_2:61915840-61915859 | None:intergenic | 45.0% | |
| CCATCAACAGTAATTTCCGC+TGG | + | chr3_2:61915950-61915969 | None:intergenic | 45.0% | |
| CCAGCGGAAATTACTGTTGA+TGG | - | chr3_2:61915947-61915966 | Msa0415610:intron | 45.0% | |
| CTCCATTGAGAGGATCGATA+TGG | + | chr3_2:61915985-61916004 | None:intergenic | 45.0% | |
| ! | CTTGATTCGTCTCCATTGAG+AGG | + | chr3_2:61915995-61916014 | None:intergenic | 45.0% |
| !!! | TTTTCTGAGACTCTGCTGCT+TGG | + | chr3_2:61916479-61916498 | None:intergenic | 45.0% |
| CAGCAGAGTCTCAGAAAACA+AGG | - | chr3_2:61916481-61916500 | Msa0415610:intron | 45.0% | |
| !! | CCCTATTGTTTTGCTACTGC+AGG | - | chr3_2:61916664-61916683 | Msa0415610:CDS | 45.0% |
| GCCTGCAGTAGCAAAACAAT+AGG | + | chr3_2:61916668-61916687 | None:intergenic | 45.0% | |
| CTACTCTGCTTCGTTGCATC+TGG | + | chr3_2:61912067-61912086 | None:intergenic | 50.0% | |
| CAGATGCAACGAAGCAGAGT+AGG | - | chr3_2:61912065-61912084 | Msa0415610:three_prime_UTR | 50.0% | |
| TATTCCCAAACTCCAGGGTC+TGG | + | chr3_2:61912689-61912708 | None:intergenic | 50.0% | |
| GAAGCTTTGCAACTGAGCTC+AGG | + | chr3_2:61913348-61913367 | None:intergenic | 50.0% | |
| GCTTCAGATGGCACTAACAG+TGG | - | chr3_2:61913363-61913382 | Msa0415610:intron | 50.0% | |
| !! | GTTCTTGGCTTGCCAGATAC+CGG | - | chr3_2:61913709-61913728 | Msa0415610:intron | 50.0% |
| AGGCTCATACCTGATGCTCA+AGG | - | chr3_2:61914335-61914354 | Msa0415610:CDS | 50.0% | |
| !! | GAGTGCTTGGTGTCAAGGAT+TGG | + | chr3_2:61914386-61914405 | None:intergenic | 50.0% |
| ! | TCTACGCGTGCCTTTTCAGA+CGG | - | chr3_2:61914412-61914431 | Msa0415610:CDS | 50.0% |
| CATGCAGCATTTACACTCCC+AGG | - | chr3_2:61915250-61915269 | Msa0415610:CDS | 50.0% | |
| TAGACAGTTTGGTCAGCTCC+AGG | + | chr3_2:61915334-61915353 | None:intergenic | 50.0% | |
| CAGACCGATAGACATCGCAA+TGG | - | chr3_2:61915794-61915813 | Msa0415610:CDS | 50.0% | |
| TACTAACCATGGTGGTCCAG+CGG | - | chr3_2:61915931-61915950 | Msa0415610:intron | 50.0% | |
| TAATTTCCGCTGGACCACCA+TGG | + | chr3_2:61915940-61915959 | None:intergenic | 50.0% | |
| TGGAACATGATTTCAGCGGC+AGG | - | chr3_2:61916064-61916083 | Msa0415610:CDS | 50.0% | |
| ! | GAGTTGGACACTGGTTGTTG+AGG | + | chr3_2:61916457-61916476 | None:intergenic | 50.0% |
| TTTGCTACTGCAGGCGTTCA+AGG | - | chr3_2:61916673-61916692 | Msa0415610:CDS | 50.0% | |
| CGTTCAAGGTCCAGATCACA+GGG | - | chr3_2:61916687-61916706 | Msa0415610:CDS | 50.0% | |
| !! | AGGGTCTGGCCTTACTGCAA+AGG | + | chr3_2:61912675-61912694 | None:intergenic | 55.0% |
| TTTGCAGTAAGGCCAGACCC+TGG | - | chr3_2:61912674-61912693 | Msa0415610:intron | 55.0% | |
| TAAGGCCAGACCCTGGAGTT+TGG | - | chr3_2:61912681-61912700 | Msa0415610:intron | 55.0% | |
| AAGGCCAGACCCTGGAGTTT+GGG | - | chr3_2:61912682-61912701 | Msa0415610:intron | 55.0% | |
| AGTGGATGGGGAGATACTGC+AGG | - | chr3_2:61913544-61913563 | Msa0415610:CDS | 55.0% | |
| AGCGAGAAACCCATTGACGC+AGG | + | chr3_2:61914448-61914467 | None:intergenic | 55.0% | |
| ! | TGCTGCTTGGAGTTGGACAC+TGG | + | chr3_2:61916466-61916485 | None:intergenic | 55.0% |
| ! | GAGACTCTGCTGCTTGGAGT+TGG | + | chr3_2:61916473-61916492 | None:intergenic | 55.0% |
| GCGTTCAAGGTCCAGATCAC+AGG | - | chr3_2:61916686-61916705 | Msa0415610:CDS | 55.0% | |
| !! | CTTGGCTTGCCAGATACCGG+CGG | - | chr3_2:61913712-61913731 | Msa0415610:intron | 60.0% |
| GTTACCTGTCCGCCGGTATC+TGG | + | chr3_2:61913724-61913743 | None:intergenic | 60.0% | |
| CTTGCCAGATACCGGCGGAC+AGG | - | chr3_2:61913717-61913736 | Msa0415610:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 61911975 | 61916855 | 61911975 | ID=Msa0415610;Name=Msa0415610 |
| chr3_2 | mRNA | 61911975 | 61916855 | 61911975 | ID=Msa0415610-mRNA-1;Parent=Msa0415610;Name=Msa0415610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=29|1|1|1|1|1|14|142|842 |
| chr3_2 | exon | 61911975 | 61912144 | 61911975 | ID=Msa0415610-mRNA-1:exon:13214;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61912318 | 61912406 | 61912318 | ID=Msa0415610-mRNA-1:exon:13213;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61912481 | 61912619 | 61912481 | ID=Msa0415610-mRNA-1:exon:13212;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61912723 | 61913289 | 61912723 | ID=Msa0415610-mRNA-1:exon:13211;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61913384 | 61913608 | 61913384 | ID=Msa0415610-mRNA-1:exon:13210;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61913766 | 61913932 | 61913766 | ID=Msa0415610-mRNA-1:exon:13209;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61914074 | 61914190 | 61914074 | ID=Msa0415610-mRNA-1:exon:13208;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61914328 | 61914501 | 61914328 | ID=Msa0415610-mRNA-1:exon:13207;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61914603 | 61914698 | 61914603 | ID=Msa0415610-mRNA-1:exon:13206;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61915092 | 61915308 | 61915092 | ID=Msa0415610-mRNA-1:exon:13205;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61915387 | 61915505 | 61915387 | ID=Msa0415610-mRNA-1:exon:13204;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61915720 | 61915912 | 61915720 | ID=Msa0415610-mRNA-1:exon:13203;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61916032 | 61916186 | 61916032 | ID=Msa0415610-mRNA-1:exon:13202;Parent=Msa0415610-mRNA-1 |
| chr3_2 | exon | 61916584 | 61916855 | 61916584 | ID=Msa0415610-mRNA-1:exon:13201;Parent=Msa0415610-mRNA-1 |
| chr3_2 | five_prime_UTR | 61916827 | 61916855 | 61916827 | ID=Msa0415610-mRNA-1:five_prime_utr;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61916584 | 61916826 | 61916584 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61916032 | 61916186 | 61916032 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61915720 | 61915912 | 61915720 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61915387 | 61915505 | 61915387 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61915092 | 61915308 | 61915092 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61914603 | 61914698 | 61914603 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61914328 | 61914501 | 61914328 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61914074 | 61914190 | 61914074 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61913766 | 61913932 | 61913766 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61913384 | 61913608 | 61913384 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61912723 | 61913289 | 61912723 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61912481 | 61912619 | 61912481 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61912318 | 61912406 | 61912318 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | CDS | 61912117 | 61912144 | 61912117 | ID=Msa0415610-mRNA-1:cds;Parent=Msa0415610-mRNA-1 |
| chr3_2 | three_prime_UTR | 61911975 | 61912116 | 61911975 | ID=Msa0415610-mRNA-1:three_prime_utr;Parent=Msa0415610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
