Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271040 | XP_024628361.2 | 97.626 | 337 | 8 | 0 | 1 | 337 | 34 | 370 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271040 | sp|Q08062|MDHC_MAIZE | 85.410 | 329 | 48 | 0 | 9 | 337 | 3 | 331 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271040 | G7LBJ9 | 97.329 | 337 | 9 | 0 | 1 | 337 | 77 | 413 | 0.0 | 679 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071880 | Msa1271040 | 0.803803 | 2.927717e-49 | -8.615850e-47 |
| Msa0616510 | Msa1271040 | 0.839907 | 1.196192e-57 | -8.615850e-47 |
| Msa0699840 | Msa1271040 | 0.844837 | 5.901445e-59 | -8.615850e-47 |
| Msa0742650 | Msa1271040 | 0.816574 | 5.155234e-52 | -8.615850e-47 |
| Msa0782760 | Msa1271040 | 0.805838 | 1.100333e-49 | -8.615850e-47 |
| Msa0796160 | Msa1271040 | 0.814366 | 1.598025e-51 | -8.615850e-47 |
| Msa0820370 | Msa1271040 | 0.801926 | 7.148474e-49 | -8.615850e-47 |
| Msa0820390 | Msa1271040 | 0.811648 | 6.301792e-51 | -8.615850e-47 |
| Msa0833760 | Msa1271040 | 0.814414 | 1.559579e-51 | -8.615850e-47 |
| Msa0164400 | Msa1271040 | 0.801218 | 9.989648e-49 | -8.615850e-47 |
| Msa0194820 | Msa1271040 | 0.814560 | 1.448148e-51 | -8.615850e-47 |
| Msa0194840 | Msa1271040 | 0.814762 | 1.305854e-51 | -8.615850e-47 |
| Msa1227940 | Msa1271040 | 0.841226 | 5.404417e-58 | -8.615850e-47 |
| Msa1271040 | Msa1341890 | 0.837003 | 6.715446e-57 | -8.615850e-47 |
| Msa0367830 | Msa1271040 | 0.809493 | 1.841241e-50 | -8.615850e-47 |
| Msa0388770 | Msa1271040 | 0.814471 | 1.515139e-51 | -8.615850e-47 |
| Msa1020630 | Msa1271040 | 0.810716 | 1.003794e-50 | -8.615850e-47 |
| Msa1132700 | Msa1271040 | 0.818091 | 2.348321e-52 | -8.615850e-47 |
| Msa1160500 | Msa1271040 | 0.805208 | 1.491297e-49 | -8.615850e-47 |
| Msa1184330 | Msa1271040 | 0.841587 | 4.340761e-58 | -8.615850e-47 |
| Msa0580440 | Msa1271040 | 0.805283 | 1.438613e-49 | -8.615850e-47 |
| Msa0846730 | Msa1271040 | 0.813804 | 2.125926e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271040 | MtrunA17_Chr8g0334691 | 97.403 | 308 | 8 | 0 | 30 | 337 | 1 | 308 | 0.0 | 625 |
| Msa1271040 | MtrunA17_Chr1g0167651 | 84.802 | 329 | 50 | 0 | 9 | 337 | 3 | 331 | 0.0 | 564 |
| Msa1271040 | MtrunA17_Chr1g0187751 | 83.891 | 329 | 53 | 0 | 9 | 337 | 3 | 331 | 0.0 | 557 |
| Msa1271040 | MtrunA17_Chr1g0197371 | 42.284 | 324 | 181 | 4 | 9 | 330 | 92 | 411 | 3.11e-80 | 251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271040 | AT1G04410.1 | 82.675 | 329 | 57 | 0 | 9 | 337 | 3 | 331 | 0.0 | 548 |
| Msa1271040 | AT5G43330.1 | 82.979 | 329 | 56 | 0 | 9 | 337 | 3 | 331 | 0.0 | 546 |
| Msa1271040 | AT5G56720.1 | 75.371 | 337 | 83 | 0 | 1 | 337 | 34 | 370 | 0.0 | 531 |
| Msa1271040 | AT5G58330.2 | 44.136 | 324 | 175 | 4 | 9 | 330 | 96 | 415 | 6.60e-84 | 261 |
| Msa1271040 | AT5G58330.1 | 44.136 | 324 | 175 | 4 | 9 | 330 | 97 | 416 | 7.09e-84 | 261 |
| Msa1271040 | AT5G58330.3 | 44.444 | 306 | 164 | 4 | 27 | 330 | 6 | 307 | 1.31e-80 | 249 |
| Msa1271040 | AT3G47520.1 | 28.000 | 250 | 159 | 7 | 14 | 253 | 85 | 323 | 6.99e-13 | 69.3 |
Find 76 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATTATAGGTTGATT+TGG | 0.201276 | 8_3:-4450406 | None:intergenic |
| CATATTCGTGATTGGGTTCT+AGG | 0.208668 | 8_3:+4451587 | Msa1271040:CDS |
| GATTAAAACACAGGACAAAT+TGG | 0.265846 | 8_3:+4450340 | Msa1271040:intron |
| CCAGCATTAGAGGCACTTAA+AGG | 0.277108 | 8_3:+4450445 | Msa1271040:CDS |
| ATTAGAGCATTTGTATTTGC+TGG | 0.287739 | 8_3:-4451077 | None:intergenic |
| AATTAGTTGCTGATGATAAT+TGG | 0.294423 | 8_3:+4451315 | Msa1271040:CDS |
| CAGCTTCCTTGCTTTGATAA+TGG | 0.303489 | 8_3:-4451528 | None:intergenic |
| TCAAGCATATGCAAAATTAT+AGG | 0.311570 | 8_3:-4450415 | None:intergenic |
| CATTTAGCTTCTCAGAGATT+TGG | 0.316171 | 8_3:-4451178 | None:intergenic |
| TGATATTGAACCAGCATTAG+AGG | 0.332040 | 8_3:+4450435 | Msa1271040:CDS |
| GTGTATTCTGATGGATCTTA+TGG | 0.333768 | 8_3:+4451723 | Msa1271040:CDS |
| GCTGCTTTCCCACTTCTTAG+AGG | 0.334277 | 8_3:+4450490 | Msa1271040:CDS |
| TCTCCTTTGTCACATGTAAC+AGG | 0.337906 | 8_3:-4451774 | None:intergenic |
| CTTGCGATCATATTCGTGAT+TGG | 0.341095 | 8_3:+4451579 | Msa1271040:CDS |
| GCAAAATTATAGGTTGATTT+GGG | 0.342010 | 8_3:-4450405 | None:intergenic |
| CTTGATCATAATAGAGCATT+AGG | 0.352322 | 8_3:+4451155 | Msa1271040:CDS |
| CTAATTCTCTGACATGCTTC+TGG | 0.371163 | 8_3:-4451298 | None:intergenic |
| CAAGGCTCAAGCTTCAGCTT+TGG | 0.381754 | 8_3:+4450753 | Msa1271040:CDS |
| ATCATCCCTCTTGCTATCAT+TGG | 0.393430 | 8_3:-4450376 | None:intergenic |
| AGCATTTGTATTTGCTGGAT+TGG | 0.420149 | 8_3:-4451072 | None:intergenic |
| TTGCGATCATATTCGTGATT+GGG | 0.420157 | 8_3:+4451580 | Msa1271040:CDS |
| GGCTCAAGCTTCAGCTTTGG+AGG | 0.422591 | 8_3:+4450756 | Msa1271040:CDS |
| CTTTCCATTCCTTCCTTCCG+TGG | 0.437314 | 8_3:-4450697 | None:intergenic |
| CAGCATTAGAGGCACTTAAA+GGG | 0.439157 | 8_3:+4450446 | Msa1271040:CDS |
| CCTTTAAGTGCCTCTAATGC+TGG | 0.442041 | 8_3:-4450445 | None:intergenic |
| TCAGGGAACATGGGTATCAA+TGG | 0.455290 | 8_3:+4451698 | Msa1271040:intron |
| AACATTGCTGCTATGGTTGG+TGG | 0.459487 | 8_3:+4450670 | Msa1271040:CDS |
| ATAGCAAGAGGGATGATGTT+AGG | 0.473050 | 8_3:+4450382 | Msa1271040:CDS |
| TTGATCTATTTCAGGGAACA+TGG | 0.477408 | 8_3:+4451688 | Msa1271040:intron |
| TATAGGTGTTGTTGCTACTA+CGG | 0.487099 | 8_3:+4450621 | Msa1271040:intron |
| GGCACTTAAAGGGGTGAAGA+TGG | 0.489594 | 8_3:+4450456 | Msa1271040:CDS |
| TGAATTCTCAAGGGAAAAGA+TGG | 0.497373 | 8_3:+4451939 | Msa1271040:CDS |
| GGATGTTAACATTGCTGCTA+TGG | 0.500407 | 8_3:+4450663 | Msa1271040:CDS |
| TAAGAATGTTTCAATTTACA+AGG | 0.500824 | 8_3:+4450735 | Msa1271040:CDS |
| GAAAGAACCGGTCACCGTAT+TGG | 0.503989 | 8_3:+4449968 | Msa1271040:CDS |
| TTTCCATTCCTTCCTTCCGT+GGG | 0.509336 | 8_3:-4450696 | None:intergenic |
| CAGGGAACATGGGTATCAAT+GGG | 0.511230 | 8_3:+4451699 | Msa1271040:intron |
| ACGGTTGCATGGTTGACGTC+TGG | 0.512596 | 8_3:-4451260 | None:intergenic |
| TCTCAAAGTTGAGAAAGAAC+CGG | 0.521257 | 8_3:+4449956 | Msa1271040:CDS |
| TCACAACTGTTCAGCAGCGT+GGG | 0.522667 | 8_3:+4451501 | Msa1271040:CDS |
| GTATTGGTCACTGGTGCTGC+AGG | 0.525951 | 8_3:+4449984 | Msa1271040:CDS |
| TACTTGTTGCCACGGTTGCA+TGG | 0.531832 | 8_3:-4451271 | None:intergenic |
| GTTAACATTGCTGCTATGGT+TGG | 0.531887 | 8_3:+4450667 | Msa1271040:CDS |
| CCGGTCACCGTATTGGTCAC+TGG | 0.538505 | 8_3:+4449975 | Msa1271040:CDS |
| CTGGCCATTACTTGTTGCCA+CGG | 0.542599 | 8_3:-4451279 | None:intergenic |
| GCAACCGTGGCAACAAGTAA+TGG | 0.552748 | 8_3:+4451275 | Msa1271040:CDS |
| TTACATGTGACAAAGGAGAA+TGG | 0.562455 | 8_3:+4451778 | Msa1271040:CDS |
| TCAAGATTGATGAATTCTCA+AGG | 0.563770 | 8_3:+4451929 | Msa1271040:CDS |
| ATCACAACTGTTCAGCAGCG+TGG | 0.564705 | 8_3:+4451500 | Msa1271040:CDS |
| CCAGTGACCAATACGGTGAC+CGG | 0.566136 | 8_3:-4449975 | None:intergenic |
| GGTGGATTCCCACGGAAGGA+AGG | 0.567363 | 8_3:+4450688 | Msa1271040:CDS |
| GGATCTTATGGTATCCAACC+TGG | 0.573108 | 8_3:+4451735 | Msa1271040:CDS |
| TTGGGTTCTAGGTACACCTA+AGG | 0.583834 | 8_3:+4451598 | Msa1271040:CDS |
| TGATCTATTTCAGGGAACAT+GGG | 0.587962 | 8_3:+4451689 | Msa1271040:intron |
| CACAACTGTTCAGCAGCGTG+GGG | 0.588509 | 8_3:+4451502 | Msa1271040:CDS |
| CTATGGTTGGTGGATTCCCA+CGG | 0.589058 | 8_3:+4450680 | Msa1271040:CDS |
| TCAATGGGAGTGTATTCTGA+TGG | 0.591080 | 8_3:+4451714 | Msa1271040:CDS |
| AAGAGTAAATGAGACCAGGT+TGG | 0.593344 | 8_3:-4451749 | None:intergenic |
| TTTCCTGTTACATGTGACAA+AGG | 0.594930 | 8_3:+4451771 | Msa1271040:CDS |
| AAAACATGCCTCTAAGAAGT+GGG | 0.598346 | 8_3:-4450498 | None:intergenic |
| ATTCCCACGGAAGGAAGGAA+TGG | 0.604648 | 8_3:+4450693 | Msa1271040:CDS |
| TGCAGCACCAGTGACCAATA+CGG | 0.612142 | 8_3:-4449982 | None:intergenic |
| CTTGTTCCAATGATAGCAAG+AGG | 0.618184 | 8_3:+4450370 | Msa1271040:CDS |
| GGATGTTGTTGAAGCTTGCA+AGG | 0.620315 | 8_3:+4450642 | Msa1271040:CDS |
| GCTCATTGAGGAGAAAACAT+TGG | 0.620815 | 8_3:+4451978 | Msa1271040:CDS |
| AGCATTAGAGGCACTTAAAG+GGG | 0.621633 | 8_3:+4450447 | Msa1271040:CDS |
| CAAGATTGATGAATTCTCAA+GGG | 0.626012 | 8_3:+4451930 | Msa1271040:CDS |
| GGAGAATGGAACATTGTACA+AGG | 0.636027 | 8_3:+4451792 | Msa1271040:CDS |
| AACAGCTCAAGAGCTCATTG+AGG | 0.646195 | 8_3:+4451966 | Msa1271040:CDS |
| GGAAAAGAGTAAATGAGACC+AGG | 0.651573 | 8_3:-4451753 | None:intergenic |
| GGGGTGCCATTATCAAAGCA+AGG | 0.653347 | 8_3:+4451522 | Msa1271040:CDS |
| GGTTGGTGGATTCCCACGGA+AGG | 0.658338 | 8_3:+4450684 | Msa1271040:CDS |
| GACGTCTGGATATTGAGTTG+AGG | 0.679778 | 8_3:-4451246 | None:intergenic |
| AGACGTCAACCATGCAACCG+TGG | 0.680021 | 8_3:+4451262 | Msa1271040:CDS |
| TTGTTCCAATGATAGCAAGA+GGG | 0.692772 | 8_3:+4450371 | Msa1271040:CDS |
| ACAACTGTTCAGCAGCGTGG+GGG | 0.720838 | 8_3:+4451503 | Msa1271040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACTATATTGATTTTTAT+TGG | - | chr8_3:4450209-4450228 | None:intergenic | 10.0% |
| !! | TTAATCAAATCAAAATTAAA+AGG | - | chr8_3:4450326-4450345 | None:intergenic | 10.0% |
| !!! | TTTACTATATTGATTTTTAT+TGG | - | chr8_3:4450209-4450228 | None:intergenic | 10.0% |
| !! | TTAATCAAATCAAAATTAAA+AGG | - | chr8_3:4450326-4450345 | None:intergenic | 10.0% |
| !! | TGCATATAAAAATGTAATAT+AGG | + | chr8_3:4450604-4450623 | Msa1271040:intron | 15.0% |
| !! | TGCATATAAAAATGTAATAT+AGG | + | chr8_3:4450604-4450623 | Msa1271040:intron | 15.0% |
| !! | ACATAAATTTAAAAATCCAC+AGG | + | chr8_3:4450108-4450127 | Msa1271040:intron | 20.0% |
| !! | CATAAATTTAAAAATCCACA+GGG | + | chr8_3:4450109-4450128 | Msa1271040:intron | 20.0% |
| !!! | TTTTGATTTGATTAAAACAC+AGG | + | chr8_3:4450331-4450350 | Msa1271040:intron | 20.0% |
| !! | TAAGAATGTTTCAATTTACA+AGG | + | chr8_3:4450735-4450754 | Msa1271040:CDS | 20.0% |
| !!! | GACATGTTATATTTTTATCA+GGG | - | chr8_3:4451127-4451146 | None:intergenic | 20.0% |
| !!! | AGACATGTTATATTTTTATC+AGG | - | chr8_3:4451128-4451147 | None:intergenic | 20.0% |
| !! | ATGTGAAAAATGTTATCATT+TGG | + | chr8_3:4451213-4451232 | Msa1271040:CDS | 20.0% |
| !! | TGTGAAAAATGTTATCATTT+GGG | + | chr8_3:4451214-4451233 | Msa1271040:CDS | 20.0% |
| !!! | ATATATTTTTCTTGTGTGTT+AGG | + | chr8_3:4451462-4451481 | Msa1271040:intron | 20.0% |
| !! | TATTTACTTTGATCTATTTC+AGG | + | chr8_3:4451680-4451699 | Msa1271040:intron | 20.0% |
| !! | ATTTACTTTGATCTATTTCA+GGG | + | chr8_3:4451681-4451700 | Msa1271040:intron | 20.0% |
| !! | TTATGTTATGATAATTTGAC+AGG | + | chr8_3:4451904-4451923 | Msa1271040:intron | 20.0% |
| !! | TATGTTATGATAATTTGACA+GGG | + | chr8_3:4451905-4451924 | Msa1271040:intron | 20.0% |
| !! | ACATAAATTTAAAAATCCAC+AGG | + | chr8_3:4450108-4450127 | Msa1271040:intron | 20.0% |
| !! | CATAAATTTAAAAATCCACA+GGG | + | chr8_3:4450109-4450128 | Msa1271040:intron | 20.0% |
| !!! | TTTTGATTTGATTAAAACAC+AGG | + | chr8_3:4450331-4450350 | Msa1271040:intron | 20.0% |
| !! | TAAGAATGTTTCAATTTACA+AGG | + | chr8_3:4450735-4450754 | Msa1271040:CDS | 20.0% |
| !!! | GACATGTTATATTTTTATCA+GGG | - | chr8_3:4451127-4451146 | None:intergenic | 20.0% |
| !!! | AGACATGTTATATTTTTATC+AGG | - | chr8_3:4451128-4451147 | None:intergenic | 20.0% |
| !! | ATGTGAAAAATGTTATCATT+TGG | + | chr8_3:4451213-4451232 | Msa1271040:CDS | 20.0% |
| !! | TGTGAAAAATGTTATCATTT+GGG | + | chr8_3:4451214-4451233 | Msa1271040:CDS | 20.0% |
| !!! | ATATATTTTTCTTGTGTGTT+AGG | + | chr8_3:4451462-4451481 | Msa1271040:intron | 20.0% |
| !! | TATTTACTTTGATCTATTTC+AGG | + | chr8_3:4451680-4451699 | Msa1271040:intron | 20.0% |
| !! | ATTTACTTTGATCTATTTCA+GGG | + | chr8_3:4451681-4451700 | Msa1271040:intron | 20.0% |
| !! | TTATGTTATGATAATTTGAC+AGG | + | chr8_3:4451904-4451923 | Msa1271040:intron | 20.0% |
| !! | TATGTTATGATAATTTGACA+GGG | + | chr8_3:4451905-4451924 | Msa1271040:intron | 20.0% |
| !! | TGTGTTCTTAGTTGAAATTT+TGG | + | chr8_3:4450022-4450041 | Msa1271040:intron | 25.0% |
| !!! | TTGAAATTTTGGTTAACCTT+AGG | + | chr8_3:4450033-4450052 | Msa1271040:intron | 25.0% |
| !!! | GCTTTATTTGCAATGTAATA+TGG | - | chr8_3:4450077-4450096 | None:intergenic | 25.0% |
| !!! | GCAAAATTATAGGTTGATTT+GGG | - | chr8_3:4450408-4450427 | None:intergenic | 25.0% |
| !!! | TGCAAAATTATAGGTTGATT+TGG | - | chr8_3:4450409-4450428 | None:intergenic | 25.0% |
| ! | TCAAGCATATGCAAAATTAT+AGG | - | chr8_3:4450418-4450437 | None:intergenic | 25.0% |
| ! | CAATTAATCATATTCCATCA+TGG | + | chr8_3:4450545-4450564 | Msa1271040:intron | 25.0% |
| ! | ATTCATAAAGAAAACCATGA+TGG | - | chr8_3:4450562-4450581 | None:intergenic | 25.0% |
| ! | ACCTAACTATACTATAAAGA+GGG | - | chr8_3:4450823-4450842 | None:intergenic | 25.0% |
| ! | AACCTAACTATACTATAAAG+AGG | - | chr8_3:4450824-4450843 | None:intergenic | 25.0% |
| ! | AGGTTCATAAAAAATCAGTT+AGG | + | chr8_3:4450839-4450858 | Msa1271040:intron | 25.0% |
| ! | AAAATCAGTTAGGTTTGAAA+AGG | + | chr8_3:4450849-4450868 | Msa1271040:intron | 25.0% |
| ! | CCAAAACTTTATACCAATTT+GGG | + | chr8_3:4450919-4450938 | Msa1271040:intron | 25.0% |
| ! | AAGACTGAACTGTTAATTAA+TGG | - | chr8_3:4450955-4450974 | None:intergenic | 25.0% |
| !!! | ATATTTTTATCAGGGATTGA+TGG | - | chr8_3:4451119-4451138 | None:intergenic | 25.0% |
| ! | GTGAAAAATGTTATCATTTG+GGG | + | chr8_3:4451215-4451234 | Msa1271040:CDS | 25.0% |
| ! | AATTAGTTGCTGATGATAAT+TGG | + | chr8_3:4451315-4451334 | Msa1271040:CDS | 25.0% |
| ! | AATTAAGAAAAACGAACCTT+AGG | - | chr8_3:4451617-4451636 | None:intergenic | 25.0% |
| !! | TGTGTTCTTAGTTGAAATTT+TGG | + | chr8_3:4450022-4450041 | Msa1271040:intron | 25.0% |
| !!! | TTGAAATTTTGGTTAACCTT+AGG | + | chr8_3:4450033-4450052 | Msa1271040:intron | 25.0% |
| !!! | GCTTTATTTGCAATGTAATA+TGG | - | chr8_3:4450077-4450096 | None:intergenic | 25.0% |
| !!! | GCAAAATTATAGGTTGATTT+GGG | - | chr8_3:4450408-4450427 | None:intergenic | 25.0% |
| !!! | TGCAAAATTATAGGTTGATT+TGG | - | chr8_3:4450409-4450428 | None:intergenic | 25.0% |
| ! | TCAAGCATATGCAAAATTAT+AGG | - | chr8_3:4450418-4450437 | None:intergenic | 25.0% |
| ! | CAATTAATCATATTCCATCA+TGG | + | chr8_3:4450545-4450564 | Msa1271040:intron | 25.0% |
| ! | ATTCATAAAGAAAACCATGA+TGG | - | chr8_3:4450562-4450581 | None:intergenic | 25.0% |
| ! | ACCTAACTATACTATAAAGA+GGG | - | chr8_3:4450823-4450842 | None:intergenic | 25.0% |
| ! | AACCTAACTATACTATAAAG+AGG | - | chr8_3:4450824-4450843 | None:intergenic | 25.0% |
| ! | AGGTTCATAAAAAATCAGTT+AGG | + | chr8_3:4450839-4450858 | Msa1271040:intron | 25.0% |
| ! | AAAATCAGTTAGGTTTGAAA+AGG | + | chr8_3:4450849-4450868 | Msa1271040:intron | 25.0% |
| ! | CCAAAACTTTATACCAATTT+GGG | + | chr8_3:4450919-4450938 | Msa1271040:intron | 25.0% |
| ! | AAGACTGAACTGTTAATTAA+TGG | - | chr8_3:4450955-4450974 | None:intergenic | 25.0% |
| !!! | ATATTTTTATCAGGGATTGA+TGG | - | chr8_3:4451119-4451138 | None:intergenic | 25.0% |
| ! | GTGAAAAATGTTATCATTTG+GGG | + | chr8_3:4451215-4451234 | Msa1271040:CDS | 25.0% |
| ! | AATTAGTTGCTGATGATAAT+TGG | + | chr8_3:4451315-4451334 | Msa1271040:CDS | 25.0% |
| ! | AATTAAGAAAAACGAACCTT+AGG | - | chr8_3:4451617-4451636 | None:intergenic | 25.0% |
| CAAAAATATGTGACTTCCTA+AGG | - | chr8_3:4450052-4450071 | None:intergenic | 30.0% | |
| GATTAAAACACAGGACAAAT+TGG | + | chr8_3:4450340-4450359 | Msa1271040:intron | 30.0% | |
| ACCCTCTTTATAGTATAGTT+AGG | + | chr8_3:4450819-4450838 | Msa1271040:intron | 30.0% | |
| GCCAAAACTTTATACCAATT+TGG | + | chr8_3:4450918-4450937 | Msa1271040:intron | 30.0% | |
| ! | CCCAAATTGGTATAAAGTTT+TGG | - | chr8_3:4450922-4450941 | None:intergenic | 30.0% |
| GAAAGGAAATTATAACTACC+TGG | - | chr8_3:4450979-4450998 | None:intergenic | 30.0% | |
| ! | GTTCATGGTTTGATTTAGAA+AGG | - | chr8_3:4450996-4451015 | None:intergenic | 30.0% |
| ATCAAGATTAGGATTGTTCA+TGG | - | chr8_3:4451011-4451030 | None:intergenic | 30.0% | |
| TGGAAGATACAATCAAGATT+AGG | - | chr8_3:4451022-4451041 | None:intergenic | 30.0% | |
| !! | TTCCAATTATTTCTGAATGC+AGG | + | chr8_3:4451037-4451056 | Msa1271040:intron | 30.0% |
| ! | ATTAGAGCATTTGTATTTGC+TGG | - | chr8_3:4451080-4451099 | None:intergenic | 30.0% |
| ! | CTTGATCATAATAGAGCATT+AGG | + | chr8_3:4451155-4451174 | Msa1271040:CDS | 30.0% |
| AATAAAGCACAAAGCATAAG+TGG | - | chr8_3:4451664-4451683 | None:intergenic | 30.0% | |
| !! | TTCCTAGTTCTAGCAAATAA+CGG | + | chr8_3:4451843-4451862 | Msa1271040:intron | 30.0% |
| ! | CATAACTGATTTCTTCATCA+AGG | - | chr8_3:4451889-4451908 | None:intergenic | 30.0% |
| TCAAGATTGATGAATTCTCA+AGG | + | chr8_3:4451929-4451948 | Msa1271040:CDS | 30.0% | |
| CAAGATTGATGAATTCTCAA+GGG | + | chr8_3:4451930-4451949 | Msa1271040:CDS | 30.0% | |
| CAAAAATATGTGACTTCCTA+AGG | - | chr8_3:4450052-4450071 | None:intergenic | 30.0% | |
| GATTAAAACACAGGACAAAT+TGG | + | chr8_3:4450340-4450359 | Msa1271040:intron | 30.0% | |
| ACCCTCTTTATAGTATAGTT+AGG | + | chr8_3:4450819-4450838 | Msa1271040:intron | 30.0% | |
| GCCAAAACTTTATACCAATT+TGG | + | chr8_3:4450918-4450937 | Msa1271040:intron | 30.0% | |
| ! | CCCAAATTGGTATAAAGTTT+TGG | - | chr8_3:4450922-4450941 | None:intergenic | 30.0% |
| GAAAGGAAATTATAACTACC+TGG | - | chr8_3:4450979-4450998 | None:intergenic | 30.0% | |
| ! | GTTCATGGTTTGATTTAGAA+AGG | - | chr8_3:4450996-4451015 | None:intergenic | 30.0% |
| ATCAAGATTAGGATTGTTCA+TGG | - | chr8_3:4451011-4451030 | None:intergenic | 30.0% | |
| TGGAAGATACAATCAAGATT+AGG | - | chr8_3:4451022-4451041 | None:intergenic | 30.0% | |
| !! | TTCCAATTATTTCTGAATGC+AGG | + | chr8_3:4451037-4451056 | Msa1271040:intron | 30.0% |
| ! | ATTAGAGCATTTGTATTTGC+TGG | - | chr8_3:4451080-4451099 | None:intergenic | 30.0% |
| ! | CTTGATCATAATAGAGCATT+AGG | + | chr8_3:4451155-4451174 | Msa1271040:CDS | 30.0% |
| AATAAAGCACAAAGCATAAG+TGG | - | chr8_3:4451664-4451683 | None:intergenic | 30.0% | |
| !! | TTCCTAGTTCTAGCAAATAA+CGG | + | chr8_3:4451843-4451862 | Msa1271040:intron | 30.0% |
| ! | CATAACTGATTTCTTCATCA+AGG | - | chr8_3:4451889-4451908 | None:intergenic | 30.0% |
| TCAAGATTGATGAATTCTCA+AGG | + | chr8_3:4451929-4451948 | Msa1271040:CDS | 30.0% | |
| CAAGATTGATGAATTCTCAA+GGG | + | chr8_3:4451930-4451949 | Msa1271040:CDS | 30.0% | |
| TCTCAAAGTTGAGAAAGAAC+CGG | + | chr8_3:4449956-4449975 | Msa1271040:CDS | 35.0% | |
| TTGTTCCAATGATAGCAAGA+GGG | + | chr8_3:4450371-4450390 | Msa1271040:CDS | 35.0% | |
| TGATATTGAACCAGCATTAG+AGG | + | chr8_3:4450435-4450454 | Msa1271040:CDS | 35.0% | |
| ! | AAAACATGCCTCTAAGAAGT+GGG | - | chr8_3:4450501-4450520 | None:intergenic | 35.0% |
| ! | AAAAACATGCCTCTAAGAAG+TGG | - | chr8_3:4450502-4450521 | None:intergenic | 35.0% |
| !! | TATAGGTGTTGTTGCTACTA+CGG | + | chr8_3:4450621-4450640 | Msa1271040:intron | 35.0% |
| ! | ACCATCATGGTTTTCTGTAA+AGG | + | chr8_3:4450873-4450892 | Msa1271040:intron | 35.0% |
| ACCTTTACAGAAAACCATGA+TGG | - | chr8_3:4450877-4450896 | None:intergenic | 35.0% | |
| ATTAACAGTTCAGTCTTACC+AGG | + | chr8_3:4450958-4450977 | Msa1271040:intron | 35.0% | |
| CACCTGCATTCAGAAATAAT+TGG | - | chr8_3:4451042-4451061 | None:intergenic | 35.0% | |
| ! | AGCATTTGTATTTGCTGGAT+TGG | - | chr8_3:4451075-4451094 | None:intergenic | 35.0% |
| ! | CATTTAGCTTCTCAGAGATT+TGG | - | chr8_3:4451181-4451200 | None:intergenic | 35.0% |
| ! | ATTGAGAAGGTTTGAAACTG+AGG | - | chr8_3:4451343-4451362 | None:intergenic | 35.0% |
| CAAAGATAGTCAGATTGAGA+AGG | - | chr8_3:4451356-4451375 | None:intergenic | 35.0% | |
| ! | TGGAATATTTAGAGCATGGA+TGG | - | chr8_3:4451397-4451416 | None:intergenic | 35.0% |
| ! | TGCATGGAATATTTAGAGCA+TGG | - | chr8_3:4451401-4451420 | None:intergenic | 35.0% |
| ACACTTAATTTCCTAGCTAG+TGG | - | chr8_3:4451442-4451461 | None:intergenic | 35.0% | |
| TTGCGATCATATTCGTGATT+GGG | + | chr8_3:4451580-4451599 | Msa1271040:CDS | 35.0% | |
| TTGATCTATTTCAGGGAACA+TGG | + | chr8_3:4451688-4451707 | Msa1271040:intron | 35.0% | |
| TGATCTATTTCAGGGAACAT+GGG | + | chr8_3:4451689-4451708 | Msa1271040:intron | 35.0% | |
| ! | GTGTATTCTGATGGATCTTA+TGG | + | chr8_3:4451723-4451742 | Msa1271040:CDS | 35.0% |
| TTTCCTGTTACATGTGACAA+AGG | + | chr8_3:4451771-4451790 | Msa1271040:CDS | 35.0% | |
| TTACATGTGACAAAGGAGAA+TGG | + | chr8_3:4451778-4451797 | Msa1271040:CDS | 35.0% | |
| TGAATTCTCAAGGGAAAAGA+TGG | + | chr8_3:4451939-4451958 | Msa1271040:CDS | 35.0% | |
| TCTCAAAGTTGAGAAAGAAC+CGG | + | chr8_3:4449956-4449975 | Msa1271040:CDS | 35.0% | |
| TTGTTCCAATGATAGCAAGA+GGG | + | chr8_3:4450371-4450390 | Msa1271040:CDS | 35.0% | |
| TGATATTGAACCAGCATTAG+AGG | + | chr8_3:4450435-4450454 | Msa1271040:CDS | 35.0% | |
| ! | AAAACATGCCTCTAAGAAGT+GGG | - | chr8_3:4450501-4450520 | None:intergenic | 35.0% |
| ! | AAAAACATGCCTCTAAGAAG+TGG | - | chr8_3:4450502-4450521 | None:intergenic | 35.0% |
| !! | TATAGGTGTTGTTGCTACTA+CGG | + | chr8_3:4450621-4450640 | Msa1271040:intron | 35.0% |
| ! | ACCATCATGGTTTTCTGTAA+AGG | + | chr8_3:4450873-4450892 | Msa1271040:intron | 35.0% |
| ACCTTTACAGAAAACCATGA+TGG | - | chr8_3:4450877-4450896 | None:intergenic | 35.0% | |
| ATTAACAGTTCAGTCTTACC+AGG | + | chr8_3:4450958-4450977 | Msa1271040:intron | 35.0% | |
| CACCTGCATTCAGAAATAAT+TGG | - | chr8_3:4451042-4451061 | None:intergenic | 35.0% | |
| ! | AGCATTTGTATTTGCTGGAT+TGG | - | chr8_3:4451075-4451094 | None:intergenic | 35.0% |
| ! | CATTTAGCTTCTCAGAGATT+TGG | - | chr8_3:4451181-4451200 | None:intergenic | 35.0% |
| ! | ATTGAGAAGGTTTGAAACTG+AGG | - | chr8_3:4451343-4451362 | None:intergenic | 35.0% |
| CAAAGATAGTCAGATTGAGA+AGG | - | chr8_3:4451356-4451375 | None:intergenic | 35.0% | |
| ! | TGGAATATTTAGAGCATGGA+TGG | - | chr8_3:4451397-4451416 | None:intergenic | 35.0% |
| ! | TGCATGGAATATTTAGAGCA+TGG | - | chr8_3:4451401-4451420 | None:intergenic | 35.0% |
| ACACTTAATTTCCTAGCTAG+TGG | - | chr8_3:4451442-4451461 | None:intergenic | 35.0% | |
| TTGCGATCATATTCGTGATT+GGG | + | chr8_3:4451580-4451599 | Msa1271040:CDS | 35.0% | |
| TTGATCTATTTCAGGGAACA+TGG | + | chr8_3:4451688-4451707 | Msa1271040:intron | 35.0% | |
| TGATCTATTTCAGGGAACAT+GGG | + | chr8_3:4451689-4451708 | Msa1271040:intron | 35.0% | |
| ! | GTGTATTCTGATGGATCTTA+TGG | + | chr8_3:4451723-4451742 | Msa1271040:CDS | 35.0% |
| TTTCCTGTTACATGTGACAA+AGG | + | chr8_3:4451771-4451790 | Msa1271040:CDS | 35.0% | |
| TTACATGTGACAAAGGAGAA+TGG | + | chr8_3:4451778-4451797 | Msa1271040:CDS | 35.0% | |
| TGAATTCTCAAGGGAAAAGA+TGG | + | chr8_3:4451939-4451958 | Msa1271040:CDS | 35.0% | |
| TGATGAATCTCAATGGATCG+TGG | - | chr8_3:4450164-4450183 | None:intergenic | 40.0% | |
| CGACATGTGATGAATCTCAA+TGG | - | chr8_3:4450171-4450190 | None:intergenic | 40.0% | |
| CTTGTTCCAATGATAGCAAG+AGG | + | chr8_3:4450370-4450389 | Msa1271040:CDS | 40.0% | |
| ! | ATCATCCCTCTTGCTATCAT+TGG | - | chr8_3:4450379-4450398 | None:intergenic | 40.0% |
| ATAGCAAGAGGGATGATGTT+AGG | + | chr8_3:4450382-4450401 | Msa1271040:CDS | 40.0% | |
| !! | CAGCATTAGAGGCACTTAAA+GGG | + | chr8_3:4450446-4450465 | Msa1271040:CDS | 40.0% |
| !! | AGCATTAGAGGCACTTAAAG+GGG | + | chr8_3:4450447-4450466 | Msa1271040:CDS | 40.0% |
| GGATGTTAACATTGCTGCTA+TGG | + | chr8_3:4450663-4450682 | Msa1271040:CDS | 40.0% | |
| GTTAACATTGCTGCTATGGT+TGG | + | chr8_3:4450667-4450686 | Msa1271040:CDS | 40.0% | |
| CTAATTCTCTGACATGCTTC+TGG | - | chr8_3:4451301-4451320 | None:intergenic | 40.0% | |
| CAGCTTCCTTGCTTTGATAA+TGG | - | chr8_3:4451531-4451550 | None:intergenic | 40.0% | |
| CTTGCGATCATATTCGTGAT+TGG | + | chr8_3:4451579-4451598 | Msa1271040:CDS | 40.0% | |
| CATATTCGTGATTGGGTTCT+AGG | + | chr8_3:4451587-4451606 | Msa1271040:CDS | 40.0% | |
| ! | TCAATGGGAGTGTATTCTGA+TGG | + | chr8_3:4451714-4451733 | Msa1271040:CDS | 40.0% |
| AAGAGTAAATGAGACCAGGT+TGG | - | chr8_3:4451752-4451771 | None:intergenic | 40.0% | |
| GGAAAAGAGTAAATGAGACC+AGG | - | chr8_3:4451756-4451775 | None:intergenic | 40.0% | |
| TCTCCTTTGTCACATGTAAC+AGG | - | chr8_3:4451777-4451796 | None:intergenic | 40.0% | |
| GGAGAATGGAACATTGTACA+AGG | + | chr8_3:4451792-4451811 | Msa1271040:CDS | 40.0% | |
| ! | GACCGTTATTTGCTAGAACT+AGG | - | chr8_3:4451848-4451867 | None:intergenic | 40.0% |
| GCTCATTGAGGAGAAAACAT+TGG | + | chr8_3:4451978-4451997 | Msa1271040:CDS | 40.0% | |
| TGATGAATCTCAATGGATCG+TGG | - | chr8_3:4450164-4450183 | None:intergenic | 40.0% | |
| CGACATGTGATGAATCTCAA+TGG | - | chr8_3:4450171-4450190 | None:intergenic | 40.0% | |
| CTTGTTCCAATGATAGCAAG+AGG | + | chr8_3:4450370-4450389 | Msa1271040:CDS | 40.0% | |
| ! | ATCATCCCTCTTGCTATCAT+TGG | - | chr8_3:4450379-4450398 | None:intergenic | 40.0% |
| ATAGCAAGAGGGATGATGTT+AGG | + | chr8_3:4450382-4450401 | Msa1271040:CDS | 40.0% | |
| !! | CAGCATTAGAGGCACTTAAA+GGG | + | chr8_3:4450446-4450465 | Msa1271040:CDS | 40.0% |
| !! | AGCATTAGAGGCACTTAAAG+GGG | + | chr8_3:4450447-4450466 | Msa1271040:CDS | 40.0% |
| GGATGTTAACATTGCTGCTA+TGG | + | chr8_3:4450663-4450682 | Msa1271040:CDS | 40.0% | |
| GTTAACATTGCTGCTATGGT+TGG | + | chr8_3:4450667-4450686 | Msa1271040:CDS | 40.0% | |
| CTAATTCTCTGACATGCTTC+TGG | - | chr8_3:4451301-4451320 | None:intergenic | 40.0% | |
| CAGCTTCCTTGCTTTGATAA+TGG | - | chr8_3:4451531-4451550 | None:intergenic | 40.0% | |
| CTTGCGATCATATTCGTGAT+TGG | + | chr8_3:4451579-4451598 | Msa1271040:CDS | 40.0% | |
| CATATTCGTGATTGGGTTCT+AGG | + | chr8_3:4451587-4451606 | Msa1271040:CDS | 40.0% | |
| ! | TCAATGGGAGTGTATTCTGA+TGG | + | chr8_3:4451714-4451733 | Msa1271040:CDS | 40.0% |
| AAGAGTAAATGAGACCAGGT+TGG | - | chr8_3:4451752-4451771 | None:intergenic | 40.0% | |
| GGAAAAGAGTAAATGAGACC+AGG | - | chr8_3:4451756-4451775 | None:intergenic | 40.0% | |
| TCTCCTTTGTCACATGTAAC+AGG | - | chr8_3:4451777-4451796 | None:intergenic | 40.0% | |
| GGAGAATGGAACATTGTACA+AGG | + | chr8_3:4451792-4451811 | Msa1271040:CDS | 40.0% | |
| ! | GACCGTTATTTGCTAGAACT+AGG | - | chr8_3:4451848-4451867 | None:intergenic | 40.0% |
| GCTCATTGAGGAGAAAACAT+TGG | + | chr8_3:4451978-4451997 | Msa1271040:CDS | 40.0% | |
| TCCACAGGGTAAATTGCAAG+TGG | + | chr8_3:4450123-4450142 | Msa1271040:intron | 45.0% | |
| GTAAATTGCAAGTGGCGAAG+TGG | + | chr8_3:4450131-4450150 | Msa1271040:intron | 45.0% | |
| CCTTTAAGTGCCTCTAATGC+TGG | - | chr8_3:4450448-4450467 | None:intergenic | 45.0% | |
| !! | CCAGCATTAGAGGCACTTAA+AGG | + | chr8_3:4450445-4450464 | Msa1271040:CDS | 45.0% |
| GGATGTTGTTGAAGCTTGCA+AGG | + | chr8_3:4450642-4450661 | Msa1271040:CDS | 45.0% | |
| AACATTGCTGCTATGGTTGG+TGG | + | chr8_3:4450670-4450689 | Msa1271040:CDS | 45.0% | |
| TTTCCATTCCTTCCTTCCGT+GGG | - | chr8_3:4450699-4450718 | None:intergenic | 45.0% | |
| !! | GGTTTGAAAAGGCACCATCA+TGG | + | chr8_3:4450860-4450879 | Msa1271040:intron | 45.0% |
| ! | GACGTCTGGATATTGAGTTG+AGG | - | chr8_3:4451249-4451268 | None:intergenic | 45.0% |
| GAGATTGCTTTGCATGTGCA+TGG | - | chr8_3:4451417-4451436 | None:intergenic | 45.0% | |
| AGCAATCTCTTCCACTAGCT+AGG | + | chr8_3:4451428-4451447 | Msa1271040:intron | 45.0% | |
| !! | TTGGGTTCTAGGTACACCTA+AGG | + | chr8_3:4451598-4451617 | Msa1271040:CDS | 45.0% |
| TCAGGGAACATGGGTATCAA+TGG | + | chr8_3:4451698-4451717 | Msa1271040:intron | 45.0% | |
| CAGGGAACATGGGTATCAAT+GGG | + | chr8_3:4451699-4451718 | Msa1271040:intron | 45.0% | |
| GGATCTTATGGTATCCAACC+TGG | + | chr8_3:4451735-4451754 | Msa1271040:CDS | 45.0% | |
| AACAGCTCAAGAGCTCATTG+AGG | + | chr8_3:4451966-4451985 | Msa1271040:CDS | 45.0% | |
| TCCACAGGGTAAATTGCAAG+TGG | + | chr8_3:4450123-4450142 | Msa1271040:intron | 45.0% | |
| GTAAATTGCAAGTGGCGAAG+TGG | + | chr8_3:4450131-4450150 | Msa1271040:intron | 45.0% | |
| CCTTTAAGTGCCTCTAATGC+TGG | - | chr8_3:4450448-4450467 | None:intergenic | 45.0% | |
| !! | CCAGCATTAGAGGCACTTAA+AGG | + | chr8_3:4450445-4450464 | Msa1271040:CDS | 45.0% |
| GGATGTTGTTGAAGCTTGCA+AGG | + | chr8_3:4450642-4450661 | Msa1271040:CDS | 45.0% | |
| AACATTGCTGCTATGGTTGG+TGG | + | chr8_3:4450670-4450689 | Msa1271040:CDS | 45.0% | |
| TTTCCATTCCTTCCTTCCGT+GGG | - | chr8_3:4450699-4450718 | None:intergenic | 45.0% | |
| !! | GGTTTGAAAAGGCACCATCA+TGG | + | chr8_3:4450860-4450879 | Msa1271040:intron | 45.0% |
| ! | GACGTCTGGATATTGAGTTG+AGG | - | chr8_3:4451249-4451268 | None:intergenic | 45.0% |
| GAGATTGCTTTGCATGTGCA+TGG | - | chr8_3:4451417-4451436 | None:intergenic | 45.0% | |
| AGCAATCTCTTCCACTAGCT+AGG | + | chr8_3:4451428-4451447 | Msa1271040:intron | 45.0% | |
| !! | TTGGGTTCTAGGTACACCTA+AGG | + | chr8_3:4451598-4451617 | Msa1271040:CDS | 45.0% |
| TCAGGGAACATGGGTATCAA+TGG | + | chr8_3:4451698-4451717 | Msa1271040:intron | 45.0% | |
| CAGGGAACATGGGTATCAAT+GGG | + | chr8_3:4451699-4451718 | Msa1271040:intron | 45.0% | |
| GGATCTTATGGTATCCAACC+TGG | + | chr8_3:4451735-4451754 | Msa1271040:CDS | 45.0% | |
| AACAGCTCAAGAGCTCATTG+AGG | + | chr8_3:4451966-4451985 | Msa1271040:CDS | 45.0% | |
| GAAAGAACCGGTCACCGTAT+TGG | + | chr8_3:4449968-4449987 | Msa1271040:CDS | 50.0% | |
| TGCAGCACCAGTGACCAATA+CGG | - | chr8_3:4449985-4450004 | None:intergenic | 50.0% | |
| GCCACTTGCAATTTACCCTG+TGG | - | chr8_3:4450127-4450146 | None:intergenic | 50.0% | |
| GGCACTTAAAGGGGTGAAGA+TGG | + | chr8_3:4450456-4450475 | Msa1271040:CDS | 50.0% | |
| ! | GCTGCTTTCCCACTTCTTAG+AGG | + | chr8_3:4450490-4450509 | Msa1271040:CDS | 50.0% |
| !! | CTATGGTTGGTGGATTCCCA+CGG | + | chr8_3:4450680-4450699 | Msa1271040:CDS | 50.0% |
| ATTCCCACGGAAGGAAGGAA+TGG | + | chr8_3:4450693-4450712 | Msa1271040:CDS | 50.0% | |
| CTTTCCATTCCTTCCTTCCG+TGG | - | chr8_3:4450700-4450719 | None:intergenic | 50.0% | |
| CAAGGCTCAAGCTTCAGCTT+TGG | + | chr8_3:4450753-4450772 | Msa1271040:CDS | 50.0% | |
| TGGTTCGTCTCGACCCAAAT+TGG | - | chr8_3:4450935-4450954 | None:intergenic | 50.0% | |
| ! | TACTTGTTGCCACGGTTGCA+TGG | - | chr8_3:4451274-4451293 | None:intergenic | 50.0% |
| GCAACCGTGGCAACAAGTAA+TGG | + | chr8_3:4451275-4451294 | Msa1271040:CDS | 50.0% | |
| ! | CTGGCCATTACTTGTTGCCA+CGG | - | chr8_3:4451282-4451301 | None:intergenic | 50.0% |
| ATCACAACTGTTCAGCAGCG+TGG | + | chr8_3:4451500-4451519 | Msa1271040:CDS | 50.0% | |
| TCACAACTGTTCAGCAGCGT+GGG | + | chr8_3:4451501-4451520 | Msa1271040:CDS | 50.0% | |
| !! | GGGGTGCCATTATCAAAGCA+AGG | + | chr8_3:4451522-4451541 | Msa1271040:CDS | 50.0% |
| GAAAGAACCGGTCACCGTAT+TGG | + | chr8_3:4449968-4449987 | Msa1271040:CDS | 50.0% | |
| TGCAGCACCAGTGACCAATA+CGG | - | chr8_3:4449985-4450004 | None:intergenic | 50.0% | |
| GCCACTTGCAATTTACCCTG+TGG | - | chr8_3:4450127-4450146 | None:intergenic | 50.0% | |
| GGCACTTAAAGGGGTGAAGA+TGG | + | chr8_3:4450456-4450475 | Msa1271040:CDS | 50.0% | |
| ! | GCTGCTTTCCCACTTCTTAG+AGG | + | chr8_3:4450490-4450509 | Msa1271040:CDS | 50.0% |
| !! | CTATGGTTGGTGGATTCCCA+CGG | + | chr8_3:4450680-4450699 | Msa1271040:CDS | 50.0% |
| ATTCCCACGGAAGGAAGGAA+TGG | + | chr8_3:4450693-4450712 | Msa1271040:CDS | 50.0% | |
| CTTTCCATTCCTTCCTTCCG+TGG | - | chr8_3:4450700-4450719 | None:intergenic | 50.0% | |
| CAAGGCTCAAGCTTCAGCTT+TGG | + | chr8_3:4450753-4450772 | Msa1271040:CDS | 50.0% | |
| TGGTTCGTCTCGACCCAAAT+TGG | - | chr8_3:4450935-4450954 | None:intergenic | 50.0% | |
| ! | TACTTGTTGCCACGGTTGCA+TGG | - | chr8_3:4451274-4451293 | None:intergenic | 50.0% |
| GCAACCGTGGCAACAAGTAA+TGG | + | chr8_3:4451275-4451294 | Msa1271040:CDS | 50.0% | |
| ! | CTGGCCATTACTTGTTGCCA+CGG | - | chr8_3:4451282-4451301 | None:intergenic | 50.0% |
| ATCACAACTGTTCAGCAGCG+TGG | + | chr8_3:4451500-4451519 | Msa1271040:CDS | 50.0% | |
| TCACAACTGTTCAGCAGCGT+GGG | + | chr8_3:4451501-4451520 | Msa1271040:CDS | 50.0% | |
| !! | GGGGTGCCATTATCAAAGCA+AGG | + | chr8_3:4451522-4451541 | Msa1271040:CDS | 50.0% |
| CCAGTGACCAATACGGTGAC+CGG | - | chr8_3:4449978-4449997 | None:intergenic | 55.0% | |
| !! | GTATTGGTCACTGGTGCTGC+AGG | + | chr8_3:4449984-4450003 | Msa1271040:CDS | 55.0% |
| ! | GGCTCAAGCTTCAGCTTTGG+AGG | + | chr8_3:4450756-4450775 | Msa1271040:CDS | 55.0% |
| ACGGTTGCATGGTTGACGTC+TGG | - | chr8_3:4451263-4451282 | None:intergenic | 55.0% | |
| AGACGTCAACCATGCAACCG+TGG | + | chr8_3:4451262-4451281 | Msa1271040:CDS | 55.0% | |
| CACAACTGTTCAGCAGCGTG+GGG | + | chr8_3:4451502-4451521 | Msa1271040:CDS | 55.0% | |
| ACAACTGTTCAGCAGCGTGG+GGG | + | chr8_3:4451503-4451522 | Msa1271040:CDS | 55.0% | |
| CCAGTGACCAATACGGTGAC+CGG | - | chr8_3:4449978-4449997 | None:intergenic | 55.0% | |
| !! | GTATTGGTCACTGGTGCTGC+AGG | + | chr8_3:4449984-4450003 | Msa1271040:CDS | 55.0% |
| ! | GGCTCAAGCTTCAGCTTTGG+AGG | + | chr8_3:4450756-4450775 | Msa1271040:CDS | 55.0% |
| ACGGTTGCATGGTTGACGTC+TGG | - | chr8_3:4451263-4451282 | None:intergenic | 55.0% | |
| AGACGTCAACCATGCAACCG+TGG | + | chr8_3:4451262-4451281 | Msa1271040:CDS | 55.0% | |
| CACAACTGTTCAGCAGCGTG+GGG | + | chr8_3:4451502-4451521 | Msa1271040:CDS | 55.0% | |
| ACAACTGTTCAGCAGCGTGG+GGG | + | chr8_3:4451503-4451522 | Msa1271040:CDS | 55.0% | |
| ! | CCGGTCACCGTATTGGTCAC+TGG | + | chr8_3:4449975-4449994 | Msa1271040:CDS | 60.0% |
| !! | GGTTGGTGGATTCCCACGGA+AGG | + | chr8_3:4450684-4450703 | Msa1271040:CDS | 60.0% |
| ! | GGTGGATTCCCACGGAAGGA+AGG | + | chr8_3:4450688-4450707 | Msa1271040:CDS | 60.0% |
| ! | CCGGTCACCGTATTGGTCAC+TGG | + | chr8_3:4449975-4449994 | Msa1271040:CDS | 60.0% |
| !! | GGTTGGTGGATTCCCACGGA+AGG | + | chr8_3:4450684-4450703 | Msa1271040:CDS | 60.0% |
| ! | GGTGGATTCCCACGGAAGGA+AGG | + | chr8_3:4450688-4450707 | Msa1271040:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 4449945 | 4452017 | 4449945 | ID=Msa1271040;Name=Msa1271040 |
| chr8_3 | mRNA | 4449945 | 4452017 | 4449945 | ID=Msa1271040-mRNA-1;Parent=Msa1271040;Name=Msa1271040-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|1|1|7|0|337 |
| chr8_3 | exon | 4449945 | 4450005 | 4449945 | ID=Msa1271040-mRNA-1:exon:1538;Parent=Msa1271040-mRNA-1 |
| chr8_3 | exon | 4450353 | 4450511 | 4450353 | ID=Msa1271040-mRNA-1:exon:1539;Parent=Msa1271040-mRNA-1 |
| chr8_3 | exon | 4450626 | 4450801 | 4450626 | ID=Msa1271040-mRNA-1:exon:1540;Parent=Msa1271040-mRNA-1 |
| chr8_3 | exon | 4451059 | 4451336 | 4451059 | ID=Msa1271040-mRNA-1:exon:1541;Parent=Msa1271040-mRNA-1 |
| chr8_3 | exon | 4451484 | 4451619 | 4451484 | ID=Msa1271040-mRNA-1:exon:1542;Parent=Msa1271040-mRNA-1 |
| chr8_3 | exon | 4451702 | 4451813 | 4451702 | ID=Msa1271040-mRNA-1:exon:1543;Parent=Msa1271040-mRNA-1 |
| chr8_3 | exon | 4451926 | 4452017 | 4451926 | ID=Msa1271040-mRNA-1:exon:1544;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4449945 | 4450005 | 4449945 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4450353 | 4450511 | 4450353 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4450626 | 4450801 | 4450626 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4451059 | 4451336 | 4451059 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4451484 | 4451619 | 4451484 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4451702 | 4451813 | 4451702 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| chr8_3 | CDS | 4451926 | 4452017 | 4451926 | ID=Msa1271040-mRNA-1:cds;Parent=Msa1271040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
