AlfalfaGEDB | Msa1341890

M. sativa cultivar zhongmu-4 / Msa1341890

KEGG: -
GO: -
PFAM: PF02453.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341890	XP_039684489.1	97.758	223	5	0	9	231	1	223	2.52e-158	447

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341890	sp\|Q9LJQ5\|RTNLI_ARATH	48.416	221	111	2	13	231	6	225	1.59e-78	238

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341890	A0A396GU97	97.758	223	5	0	9	231	1	223	1.20e-158	447

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0015150	Msa1341890	0.812323	4.492231e-51	-8.615850e-47
Msa0043290	Msa1341890	0.822061	2.896910e-53	-8.615850e-47
Msa0071850	Msa1341890	0.818569	1.830592e-52	-8.615850e-47
Msa0071860	Msa1341890	0.840753	7.189289e-58	-8.615850e-47
Msa0071880	Msa1341890	0.847880	8.737266e-60	-8.615850e-47
Msa0081520	Msa1341890	0.831180	1.931673e-55	-8.615850e-47
Msa0108880	Msa1341890	0.839567	1.466983e-57	-8.615850e-47
Msa0616510	Msa1341890	0.998044	8.063187e-255	-8.615850e-47
Msa0650660	Msa1341890	0.814384	1.583728e-51	-8.615850e-47
Msa0650750	Msa1341890	0.816015	6.874341e-52	-8.615850e-47
Msa0651550	Msa1341890	0.809724	1.642203e-50	-8.615850e-47
Msa0699840	Msa1341890	0.968054	3.912266e-128	-8.615850e-47
Msa0740100	Msa1341890	0.803046	4.201280e-49	-8.615850e-47
Msa0742650	Msa1341890	0.858313	8.978036e-63	-8.615850e-47
Msa0742740	Msa1341890	0.808169	3.534771e-50	-8.615850e-47
Msa0796160	Msa1341890	0.808501	3.003095e-50	-8.615850e-47
Msa0820390	Msa1341890	0.809762	1.611562e-50	-8.615850e-47
Msa0823820	Msa1341890	0.817789	2.748734e-52	-8.615850e-47
Msa0829300	Msa1341890	0.822656	2.107630e-53	-8.615850e-47
Msa0829330	Msa1341890	0.814813	1.272621e-51	-8.615850e-47
Msa0125210	Msa1341890	0.826391	2.783911e-54	-8.615850e-47
Msa0137210	Msa1341890	0.816102	6.575950e-52	-8.615850e-47
Msa0164400	Msa1341890	0.838274	3.170554e-57	-8.615850e-47
Msa0173890	Msa1341890	0.813961	1.963934e-51	-8.615850e-47
Msa0191020	Msa1341890	0.825867	3.709307e-54	-8.615850e-47
Msa0194820	Msa1341890	0.849256	3.633375e-60	-8.615850e-47
Msa0194840	Msa1341890	0.845847	3.145866e-59	-8.615850e-47
Msa0211030	Msa1341890	0.824409	8.197590e-54	-8.615850e-47
Msa0233320	Msa1341890	0.824916	6.228869e-54	-8.615850e-47
Msa1226840	Msa1341890	0.832426	9.517047e-56	-8.615850e-47
Msa1227940	Msa1341890	0.848072	7.738703e-60	-8.615850e-47
Msa1228390	Msa1341890	0.817160	3.809028e-52	-8.615850e-47
Msa1228420	Msa1341890	0.835992	1.215099e-56	-8.615850e-47
Msa1271040	Msa1341890	0.837003	6.715446e-57	-8.615850e-47
Msa1284120	Msa1341890	0.833717	4.541911e-56	-8.615850e-47
Msa1341890	Msa1356830	0.804408	2.191171e-49	-8.615850e-47
Msa1341890	Msa1365050	0.812382	4.360614e-51	-8.615850e-47
Msa1341890	Msa1367380	0.813917	2.007470e-51	-8.615850e-47
Msa1341890	Msa1405340	0.836919	7.054824e-57	-8.615850e-47
Msa1341890	Msa1437940	0.815695	8.101348e-52	-8.615850e-47
Msa1341890	Msa1457680	0.809123	2.211008e-50	-8.615850e-47
Msa0367830	Msa1341890	0.827638	1.400472e-54	-8.615850e-47
Msa0371170	Msa1341890	0.803437	3.488191e-49	-8.615850e-47
Msa0385220	Msa1341890	0.812271	4.610463e-51	-8.615850e-47
Msa0388770	Msa1341890	0.867492	1.314946e-65	-8.615850e-47
Msa0393150	Msa1341890	0.827210	1.774153e-54	-8.615850e-47
Msa0393340	Msa1341890	0.814423	1.552355e-51	-8.615850e-47
Msa0405680	Msa1341890	0.837437	5.201524e-57	-8.615850e-47
Msa0415610	Msa1341890	0.844798	6.049265e-59	-8.615850e-47
Msa0418970	Msa1341890	0.836169	1.095099e-56	-8.615850e-47
Msa0435550	Msa1341890	0.816155	6.396773e-52	-8.615850e-47
Msa0460550	Msa1341890	0.819112	1.377818e-52	-8.615850e-47
Msa0460630	Msa1341890	0.860825	1.576386e-63	-8.615850e-47
Msa0465400	Msa1341890	0.806583	7.664902e-50	-8.615850e-47
Msa0471460	Msa1341890	0.811711	6.105730e-51	-8.615850e-47
Msa1014320	Msa1341890	0.801730	7.844177e-49	-8.615850e-47
Msa1020630	Msa1341890	0.868128	8.219700e-66	-8.615850e-47
Msa1113800	Msa1341890	0.858363	8.673903e-63	-8.615850e-47
Msa1150820	Msa1341890	0.820599	6.299542e-53	-8.615850e-47
Msa1160500	Msa1341890	0.865961	4.038866e-65	-8.615850e-47
Msa1181190	Msa1341890	0.806556	7.766048e-50	-8.615850e-47
Msa1183980	Msa1341890	0.833419	5.390452e-56	-8.615850e-47
Msa1184330	Msa1341890	0.845669	3.515788e-59	-8.615850e-47
Msa0510480	Msa1341890	0.804431	2.167386e-49	-8.615850e-47
Msa0523190	Msa1341890	0.815930	7.180974e-52	-8.615850e-47
Msa0562620	Msa1341890	0.939324	1.539171e-99	-8.615850e-47
Msa0579330	Msa1341890	0.812432	4.251886e-51	-8.615850e-47
Msa0580440	Msa1341890	0.800203	1.608997e-48	-8.615850e-47
Msa0846730	Msa1341890	0.839505	1.522448e-57	-8.615850e-47
Msa0863010	Msa1341890	0.812594	3.918747e-51	-8.615850e-47
Msa0894790	Msa1341890	0.832167	1.103447e-55	-8.615850e-47
Msa0921590	Msa1341890	0.811227	7.781113e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341890	MtrunA17_Chr8g0376101	97.758	223	5	0	9	231	1	223	2.31e-162	447
Msa1341890	MtrunA17_Chr1g0209261	46.429	196	101	1	34	229	13	204	9.58e-63	194
Msa1341890	MtrunA17_Chr8g0387631	35.821	201	129	0	29	229	58	258	9.02e-51	166
Msa1341890	MtrunA17_Chr5g0442361	40.500	200	111	2	29	223	42	238	3.55e-49	161
Msa1341890	MtrunA17_Chr3g0095441	36.323	223	129	3	2	211	3	225	7.20e-49	160
Msa1341890	MtrunA17_Chr8g0348131	37.745	204	123	1	29	228	62	265	2.73e-46	154
Msa1341890	MtrunA17_Chr1g0202401	32.110	218	146	1	12	227	32	249	4.28e-43	145
Msa1341890	MtrunA17_Chr3g0108661	25.541	231	156	2	3	219	9	237	5.20e-33	119
Msa1341890	MtrunA17_Chr4g0005701	28.502	207	148	0	25	231	3	209	1.20e-27	104
Msa1341890	MtrunA17_Chr5g0402811	30.303	198	127	2	41	230	29	223	1.49e-22	91.7
Msa1341890	MtrunA17_Chr1g0208091	29.208	202	143	0	28	229	1	202	2.31e-22	90.9
Msa1341890	MtrunA17_Chr6g0453331	29.730	185	130	0	45	229	13	197	8.59e-21	86.7
Msa1341890	MtrunA17_Chr5g0402701	27.465	142	103	0	48	189	344	485	5.33e-15	73.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341890	AT3G18260.1	48.416	221	111	2	13	231	6	225	1.61e-79	238
Msa1341890	AT2G46170.1	40.094	212	127	0	17	228	40	251	5.18e-53	172
Msa1341890	AT4G23630.1	35.821	201	129	0	29	229	73	273	3.44e-48	160
Msa1341890	AT4G23630.2	35.821	201	129	0	29	229	73	273	3.44e-48	160
Msa1341890	AT3G10260.1	31.963	219	149	0	11	229	27	245	5.76e-48	158
Msa1341890	AT3G10260.2	31.963	219	149	0	11	229	27	245	5.76e-48	158
Msa1341890	AT3G10260.3	31.963	219	149	0	11	229	47	265	1.41e-47	158
Msa1341890	AT4G11220.1	34.328	201	132	0	29	229	69	269	1.62e-47	158
Msa1341890	AT3G61560.1	37.000	200	126	0	29	228	52	251	7.50e-46	153
Msa1341890	AT3G61560.2	37.000	200	126	0	29	228	52	251	7.50e-46	153
Msa1341890	AT5G41600.1	32.195	205	135	1	29	229	52	256	2.76e-42	144
Msa1341890	AT1G64090.1	34.171	199	127	1	29	223	48	246	8.08e-42	143
Msa1341890	AT1G64090.2	31.481	216	128	2	29	224	48	263	5.43e-38	133
Msa1341890	AT4G01230.2	34.951	206	131	1	16	221	41	243	7.40e-37	130
Msa1341890	AT1G68230.2	33.175	211	135	2	21	229	7	213	1.03e-36	129
Msa1341890	AT4G01230.1	33.981	206	131	2	16	221	41	241	1.25e-33	121
Msa1341890	AT3G61560.3	40.136	147	88	0	29	175	52	198	5.26e-32	116
Msa1341890	AT2G46170.2	40.876	137	81	0	17	153	40	176	2.90e-29	108
Msa1341890	AT3G10915.2	25.822	213	157	1	17	228	12	224	4.77e-25	99.0
Msa1341890	AT3G10915.7	26.425	193	142	0	36	228	57	249	2.04e-24	97.8
Msa1341890	AT3G54120.1	31.250	192	132	0	22	213	1	192	2.09e-24	96.7
Msa1341890	AT3G19460.1	31.073	177	120	2	37	212	14	189	1.15e-23	94.4
Msa1341890	AT3G19460.5	31.073	177	120	2	37	212	14	189	1.15e-23	94.4
Msa1341890	AT3G19460.4	31.073	177	120	2	37	212	14	189	1.15e-23	94.4
Msa1341890	AT3G10915.4	25.701	214	157	2	17	228	12	225	2.40e-23	94.4
Msa1341890	AT2G15280.1	25.888	197	146	0	33	229	2	198	4.42e-23	92.8
Msa1341890	AT1G68230.1	34.810	158	97	2	21	176	7	160	3.26e-22	89.7
Msa1341890	AT3G19460.3	28.634	227	120	4	37	229	14	232	1.42e-19	84.3
Msa1341890	AT3G19460.7	28.634	227	120	4	37	229	14	232	1.42e-19	84.3
Msa1341890	AT3G10915.6	24.868	189	142	0	40	228	4	192	3.24e-19	82.4
Msa1341890	AT3G10915.3	25.137	183	137	0	46	228	9	191	6.00e-19	82.0
Msa1341890	AT3G10915.5	23.305	236	157	3	17	228	12	247	2.85e-18	81.3
Msa1341890	AT3G19460.2	27.854	219	116	4	45	229	6	216	2.03e-15	72.8
Msa1341890	AT3G19460.6	27.854	219	116	4	45	229	6	216	2.03e-15	72.8
Msa1341890	AT2G23640.1	23.404	188	141	1	45	229	16	203	4.17e-13	66.2

Find 55 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCACAATGCAACAAATTA+AGG	0.158146	tig0004930:+7697	Msa1341890:exon
AGCATCTAATGTAAACTTTA+TGG	0.210574	tig0004930:+9494	Msa1341890:three_prime_UTR
TGCTTGGGATAACATTAATT+TGG	0.217906	tig0004930:+8279	Msa1341890:CDS
ATTCTTGTAAAACAGTTTCT+AGG	0.234459	tig0004930:-8812	Msa1341890:intergenic
GAAGGAACATTCTTAGTAAT+TGG	0.237845	tig0004930:-8878	Msa1341890:intergenic
TTTATCAATTTGCTATATAT+TGG	0.250297	tig0004930:+9081	Msa1341890:CDS
ATATTTATTACAATACTATA+TGG	0.260734	tig0004930:-9527	Msa1341890:intergenic
TCTGATTCTGATGATGAAAT+TGG	0.270683	tig0004930:+7749	Msa1341890:CDS
ACAAATTAAGGGAAGTAATA+TGG	0.329605	tig0004930:+7709	Msa1341890:CDS
AAGCCACTTCATGAAATTCT+TGG	0.343549	tig0004930:+7803	Msa1341890:CDS
TGTACTCAACAACCTCAAAT+AGG	0.360635	tig0004930:-8304	Msa1341890:intergenic
CTCTATATATTGTCAGTGAT+TGG	0.375744	tig0004930:+9045	Msa1341890:CDS
GGACCTACCAATATTTCTTC+TGG	0.380270	tig0004930:+8917	Msa1341890:CDS
TATGATACCAGAAGAAATAT+TGG	0.384599	tig0004930:-8924	Msa1341890:intergenic
ATTAATTTGGTTCCTATTTG+AGG	0.387542	tig0004930:+8292	Msa1341890:CDS
CACATGCTATACATGGCAAT+GGG	0.409349	tig0004930:+9571	Msa1341890:three_prime_UTR
GAAATTCTTGGTGGAGGAAA+AGG	0.413815	tig0004930:+7815	Msa1341890:CDS
TAGTGGCTGATGTGTTGTTA+TGG	0.416856	tig0004930:+8228	Msa1341890:intron
TGAGGAAGAAATTAACAATC+TGG	0.442280	tig0004930:+9331	Msa1341890:CDS
CAAATTGATAAAGTTGAAGT+AGG	0.453688	tig0004930:-9070	Msa1341890:intergenic
CACTTGCAGATATCTTGAAA+TGG	0.455203	tig0004930:+8390	Msa1341890:CDS
ATCACAATGCAACAAATTAA+GGG	0.457087	tig0004930:+7698	Msa1341890:exon
GGACAATGAAAGCAAGCTCT+TGG	0.461016	tig0004930:-8842	Msa1341890:intergenic
TGGAGGTTTCTTAAACTTGA+GGG	0.463881	tig0004930:-7594	Msa1341890:intergenic
TACTGAAGTAAGGTATGGCT+TGG	0.467171	tig0004930:-7614	Msa1341890:intergenic
TCATATCGATCATACACAAT+TGG	0.467477	tig0004930:-9311	Msa1341890:intergenic
TTGGAGGTTTCTTAAACTTG+AGG	0.470457	tig0004930:-7595	Msa1341890:intergenic
TATCACAAGCATTGTGGTGA+TGG	0.477503	tig0004930:-8354	Msa1341890:intergenic
ATCTGAGGAAGAAATATAGA+AGG	0.482017	tig0004930:+9372	Msa1341890:CDS
TGAAGTAAGGTATGGCTTGG+AGG	0.484456	tig0004930:-7611	Msa1341890:intergenic
CAATGCTTGTGATATACCTA+TGG	0.488547	tig0004930:+8363	Msa1341890:CDS
GAAGAAATTAACAATCTGGC+TGG	0.496033	tig0004930:+9335	Msa1341890:CDS
CTCAATACTGAAGTAAGGTA+TGG	0.499969	tig0004930:-7619	Msa1341890:intergenic
CCACCAAGAATTTCATGAAG+TGG	0.510908	tig0004930:-7806	Msa1341890:intergenic
CCACTTCATGAAATTCTTGG+TGG	0.515383	tig0004930:+7806	Msa1341890:CDS
GTAATTGGTTCAATCTTCTG+TGG	0.519552	tig0004930:-8863	Msa1341890:intergenic
TCATGCTCAATACTGAAGTA+AGG	0.523265	tig0004930:-7624	Msa1341890:intergenic
TCACATGCTATACATGGCAA+TGG	0.523761	tig0004930:+9570	Msa1341890:three_prime_UTR
CTTCATGAAATTCTTGGTGG+AGG	0.540204	tig0004930:+7809	Msa1341890:CDS
TGGCTGATGTGTTGTTATGG+AGG	0.568189	tig0004930:+8231	Msa1341890:CDS
GGCTGATGTGTTGTTATGGA+GGG	0.580296	tig0004930:+8232	Msa1341890:CDS
CAATCACTGACAATATATAG+AGG	0.583298	tig0004930:-9044	Msa1341890:intergenic
TATCTGCAAGTGTAGACCAT+AGG	0.602747	tig0004930:-8379	Msa1341890:intergenic
AATTTCATCATCAGAATCAG+AGG	0.612944	tig0004930:-7747	Msa1341890:intergenic
AATTCCACGAGGACCAGTGA+AGG	0.618414	tig0004930:+9418	Msa1341890:CDS
AATTGTGTATGATCGATATG+AGG	0.624479	tig0004930:+9313	Msa1341890:CDS
ATACCAGAAGAAATATTGGT+AGG	0.628139	tig0004930:-8920	Msa1341890:intergenic
GACATGTCATAGTAGATCTG+AGG	0.630232	tig0004930:+9357	Msa1341890:CDS
ATGTTCCTTCACATATCGTG+TGG	0.630823	tig0004930:+8891	Msa1341890:CDS
CCTTCACATATCGTGTGGAA+CGG	0.638584	tig0004930:+8896	Msa1341890:CDS
CCGTTCCACACGATATGTGA+AGG	0.648767	tig0004930:-8896	Msa1341890:intergenic
ACATGCTATACATGGCAATG+GGG	0.682901	tig0004930:+9572	Msa1341890:three_prime_UTR
TAGGTATATCACAAGCATTG+TGG	0.704281	tig0004930:-8360	Msa1341890:intergenic
AAAACAGTTTCTAGGAACTG+CGG	0.706304	tig0004930:-8804	Msa1341890:intergenic
TATCTCAACAAAATTCCACG+AGG	0.793532	tig0004930:+9407	Msa1341890:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAATTTAAAAATGTCATT+TGG	-	tig0004930:8733-8752	Msa1341890:intergenic	10.0%
!!	AACTTAGTATATATATTTAT+TGG	-	tig0004930:9247-9266	Msa1341890:intergenic	10.0%
!!	ATATTTATTACAATACTATA+TGG	-	tig0004930:9530-9549	Msa1341890:intergenic	10.0%
!!	ATAAATTTAAAAATGTCATT+TGG	-	tig0004930:8733-8752	Msa1341890:intergenic	10.0%
!!	AACTTAGTATATATATTTAT+TGG	-	tig0004930:9247-9266	Msa1341890:intergenic	10.0%
!!	ATATTTATTACAATACTATA+TGG	-	tig0004930:9530-9549	Msa1341890:intergenic	10.0%
!!	ATGCAACAATAATATAAAAA+CGG	+	tig0004930:7659-7678	Msa1341890:five_prime_UTR	15.0%
!!!	TGATTTTATTTTTGTGTATA+TGG	-	tig0004930:7990-8009	Msa1341890:intergenic	15.0%
!!	AGTTACAATTTAAGAATTTA+AGG	-	tig0004930:8017-8036	Msa1341890:intergenic	15.0%
!!	TTAAATTGTAACTTACTATA+TGG	+	tig0004930:8024-8043	Msa1341890:intron	15.0%
!!	TTATTAATTCACAATTATGA+GGG	-	tig0004930:8433-8452	Msa1341890:intergenic	15.0%
!!	TTTATTAATTCACAATTATG+AGG	-	tig0004930:8434-8453	Msa1341890:intergenic	15.0%
!!	GAAAATAAGTTTAAAAAGAA+AGG	-	tig0004930:9009-9028	Msa1341890:intergenic	15.0%
!!!	TTTATCAATTTGCTATATAT+TGG	+	tig0004930:9081-9100	Msa1341890:CDS	15.0%
!!	GCTATTAAAAAAATGAATTA+AGG	+	tig0004930:9126-9145	Msa1341890:intron	15.0%
!!	ATGCAACAATAATATAAAAA+CGG	+	tig0004930:7659-7678	Msa1341890:five_prime_UTR	15.0%
!!!	TGATTTTATTTTTGTGTATA+TGG	-	tig0004930:7990-8009	Msa1341890:intergenic	15.0%
!!	AGTTACAATTTAAGAATTTA+AGG	-	tig0004930:8017-8036	Msa1341890:intergenic	15.0%
!!	TTAAATTGTAACTTACTATA+TGG	+	tig0004930:8024-8043	Msa1341890:intron	15.0%
!!	TTATTAATTCACAATTATGA+GGG	-	tig0004930:8433-8452	Msa1341890:intergenic	15.0%
!!	TTTATTAATTCACAATTATG+AGG	-	tig0004930:8434-8453	Msa1341890:intergenic	15.0%
!!	GAAAATAAGTTTAAAAAGAA+AGG	-	tig0004930:9009-9028	Msa1341890:intergenic	15.0%
!!!	TTTATCAATTTGCTATATAT+TGG	+	tig0004930:9081-9100	Msa1341890:CDS	15.0%
!!	GCTATTAAAAAAATGAATTA+AGG	+	tig0004930:9126-9145	Msa1341890:intron	15.0%
!!	AAAAACGGTTTCATAATTAA+TGG	+	tig0004930:7674-7693	Msa1341890:five_prime_UTR	20.0%
!!	ATGAATTGTTCATAATGATT+TGG	+	tig0004930:8193-8212	Msa1341890:intron	20.0%
!!	GTGAATTAATAAAATGTTAG+AGG	+	tig0004930:8441-8460	Msa1341890:intron	20.0%
!!!	ATATGTAACAGCTTTTATTA+AGG	+	tig0004930:8640-8659	Msa1341890:intron	20.0%
!!!	CTATCATTCTAATTAGTTTA+TGG	-	tig0004930:8682-8701	Msa1341890:intergenic	20.0%
!!	TAAACTAATTAGAATGATAG+TGG	+	tig0004930:8682-8701	Msa1341890:intron	20.0%
!!!	TAAATTTTACTTTTCAGGAA+TGG	+	tig0004930:8780-8799	Msa1341890:intron	20.0%
!!	AAAAAAATGAATTAAGGAAG+AGG	+	tig0004930:9132-9151	Msa1341890:intron	20.0%
!!	AAAAACGGTTTCATAATTAA+TGG	+	tig0004930:7674-7693	Msa1341890:five_prime_UTR	20.0%
!!	ATGAATTGTTCATAATGATT+TGG	+	tig0004930:8193-8212	Msa1341890:intron	20.0%
!!	GTGAATTAATAAAATGTTAG+AGG	+	tig0004930:8441-8460	Msa1341890:intron	20.0%
!!!	ATATGTAACAGCTTTTATTA+AGG	+	tig0004930:8640-8659	Msa1341890:intron	20.0%
!!!	CTATCATTCTAATTAGTTTA+TGG	-	tig0004930:8682-8701	Msa1341890:intergenic	20.0%
!!	TAAACTAATTAGAATGATAG+TGG	+	tig0004930:8682-8701	Msa1341890:intron	20.0%
!!!	TAAATTTTACTTTTCAGGAA+TGG	+	tig0004930:8780-8799	Msa1341890:intron	20.0%
!!	AAAAAAATGAATTAAGGAAG+AGG	+	tig0004930:9132-9151	Msa1341890:intron	20.0%
!	ATCACAATGCAACAAATTAA+GGG	+	tig0004930:7698-7717	Msa1341890:exon	25.0%
!	ACAAATTAAGGGAAGTAATA+TGG	+	tig0004930:7709-7728	Msa1341890:CDS	25.0%
!!!	TTCATGCTATTTTTGTTTGT+GGG	-	tig0004930:7909-7928	Msa1341890:intergenic	25.0%
!	GGAAAATGAAAGTTAACAAA+AGG	+	tig0004930:7929-7948	Msa1341890:intron	25.0%
!!	ATTAATTTGGTTCCTATTTG+AGG	+	tig0004930:8292-8311	Msa1341890:CDS	25.0%
!	TATTGAGGCAAATAAGATAA+TGG	-	tig0004930:8563-8582	Msa1341890:intergenic	25.0%
!!!	AAAATGTCATTTGGTTTGTA+AGG	-	tig0004930:8724-8743	Msa1341890:intergenic	25.0%
!	CCTGAAAAGTAAAATTTAAC+AGG	-	tig0004930:8778-8797	Msa1341890:intergenic	25.0%
!!!	CCTGTTAAATTTTACTTTTC+AGG	+	tig0004930:8775-8794	Msa1341890:intron	25.0%
!	ATTCTTGTAAAACAGTTTCT+AGG	-	tig0004930:8815-8834	Msa1341890:intergenic	25.0%
!	TATGATACCAGAAGAAATAT+TGG	-	tig0004930:8927-8946	Msa1341890:intergenic	25.0%
!	CACAAATACTAACACTTTAT+TGG	+	tig0004930:8951-8970	Msa1341890:intron	25.0%
!	CAAATTGATAAAGTTGAAGT+AGG	-	tig0004930:9073-9092	Msa1341890:intergenic	25.0%
!	AGCATCTAATGTAAACTTTA+TGG	+	tig0004930:9494-9513	Msa1341890:three_prime_UTR	25.0%
!!	ATATTTTCACATGCTATACA+TGG	+	tig0004930:9564-9583	Msa1341890:three_prime_UTR	25.0%
!	ATCACAATGCAACAAATTAA+GGG	+	tig0004930:7698-7717	Msa1341890:exon	25.0%
!	ACAAATTAAGGGAAGTAATA+TGG	+	tig0004930:7709-7728	Msa1341890:CDS	25.0%
!!!	TTCATGCTATTTTTGTTTGT+GGG	-	tig0004930:7909-7928	Msa1341890:intergenic	25.0%
!	GGAAAATGAAAGTTAACAAA+AGG	+	tig0004930:7929-7948	Msa1341890:intron	25.0%
!!	ATTAATTTGGTTCCTATTTG+AGG	+	tig0004930:8292-8311	Msa1341890:CDS	25.0%
!	TATTGAGGCAAATAAGATAA+TGG	-	tig0004930:8563-8582	Msa1341890:intergenic	25.0%
!!!	AAAATGTCATTTGGTTTGTA+AGG	-	tig0004930:8724-8743	Msa1341890:intergenic	25.0%
!	CCTGAAAAGTAAAATTTAAC+AGG	-	tig0004930:8778-8797	Msa1341890:intergenic	25.0%
!!!	CCTGTTAAATTTTACTTTTC+AGG	+	tig0004930:8775-8794	Msa1341890:intron	25.0%
!	ATTCTTGTAAAACAGTTTCT+AGG	-	tig0004930:8815-8834	Msa1341890:intergenic	25.0%
!	TATGATACCAGAAGAAATAT+TGG	-	tig0004930:8927-8946	Msa1341890:intergenic	25.0%
!	CACAAATACTAACACTTTAT+TGG	+	tig0004930:8951-8970	Msa1341890:intron	25.0%
!	CAAATTGATAAAGTTGAAGT+AGG	-	tig0004930:9073-9092	Msa1341890:intergenic	25.0%
!	AGCATCTAATGTAAACTTTA+TGG	+	tig0004930:9494-9513	Msa1341890:three_prime_UTR	25.0%
!!	ATATTTTCACATGCTATACA+TGG	+	tig0004930:9564-9583	Msa1341890:three_prime_UTR	25.0%
	CATCACAATGCAACAAATTA+AGG	+	tig0004930:7697-7716	Msa1341890:exon	30.0%
	AATTTCATCATCAGAATCAG+AGG	-	tig0004930:7750-7769	Msa1341890:intergenic	30.0%
!	TCTGATTCTGATGATGAAAT+TGG	+	tig0004930:7749-7768	Msa1341890:CDS	30.0%
!!!	TCATGCTATTTTTGTTTGTG+GGG	-	tig0004930:7908-7927	Msa1341890:intergenic	30.0%
!!!	CTTCATGCTATTTTTGTTTG+TGG	-	tig0004930:7910-7929	Msa1341890:intergenic	30.0%
	CACAAACAAAAATAGCATGA+AGG	+	tig0004930:7908-7927	Msa1341890:intron	30.0%
	TTTGTTCTGGCAAAATACAA+GGG	-	tig0004930:8072-8091	Msa1341890:intergenic	30.0%
	ATTTGTTCTGGCAAAATACA+AGG	-	tig0004930:8073-8092	Msa1341890:intergenic	30.0%
!	TATTTTGCCAGAACAAATGA+AGG	+	tig0004930:8075-8094	Msa1341890:intron	30.0%
!!	TTTGGTTGATAAATGTGTAG+TGG	+	tig0004930:8211-8230	Msa1341890:intron	30.0%
	TGCTTGGGATAACATTAATT+TGG	+	tig0004930:8279-8298	Msa1341890:CDS	30.0%
	GCCAAAAAGTAATTATAGTC+CGG	+	tig0004930:8495-8514	Msa1341890:intron	30.0%
!!	TCCGGACTATAATTACTTTT+TGG	-	tig0004930:8499-8518	Msa1341890:intergenic	30.0%
!	CAAATAAGATAATGGTAGGA+TGG	-	tig0004930:8555-8574	Msa1341890:intergenic	30.0%
	GTGTTCAAAATGACTTATTG+AGG	-	tig0004930:8578-8597	Msa1341890:intergenic	30.0%
	TTTAACAGGCAAAGAAAATG+TGG	-	tig0004930:8764-8783	Msa1341890:intergenic	30.0%
	GAAGGAACATTCTTAGTAAT+TGG	-	tig0004930:8881-8900	Msa1341890:intergenic	30.0%
	ATACCAGAAGAAATATTGGT+AGG	-	tig0004930:8923-8942	Msa1341890:intergenic	30.0%
	CAATCACTGACAATATATAG+AGG	-	tig0004930:9047-9066	Msa1341890:intergenic	30.0%
	CTCTATATATTGTCAGTGAT+TGG	+	tig0004930:9045-9064	Msa1341890:CDS	30.0%
	ATACTAAGTTGTCCTCTTTA+TGG	+	tig0004930:9257-9276	Msa1341890:intron	30.0%
	AAACCTTATCAACCATAAAG+AGG	-	tig0004930:9272-9291	Msa1341890:intergenic	30.0%
	TCATATCGATCATACACAAT+TGG	-	tig0004930:9314-9333	Msa1341890:intergenic	30.0%
	AATTGTGTATGATCGATATG+AGG	+	tig0004930:9313-9332	Msa1341890:CDS	30.0%
	TGAGGAAGAAATTAACAATC+TGG	+	tig0004930:9331-9350	Msa1341890:CDS	30.0%
	ATCTGAGGAAGAAATATAGA+AGG	+	tig0004930:9372-9391	Msa1341890:CDS	30.0%
	AATGGGGATTGTACAAAAAT+TGG	+	tig0004930:9588-9607	Msa1341890:three_prime_UTR	30.0%
	ATGGGGATTGTACAAAAATT+GGG	+	tig0004930:9589-9608	Msa1341890:three_prime_UTR	30.0%
	TTGTACAAAAATTGGGATGA+TGG	+	tig0004930:9596-9615	Msa1341890:three_prime_UTR	30.0%
	CATCACAATGCAACAAATTA+AGG	+	tig0004930:7697-7716	Msa1341890:exon	30.0%
	AATTTCATCATCAGAATCAG+AGG	-	tig0004930:7750-7769	Msa1341890:intergenic	30.0%
!	TCTGATTCTGATGATGAAAT+TGG	+	tig0004930:7749-7768	Msa1341890:CDS	30.0%
!!!	TCATGCTATTTTTGTTTGTG+GGG	-	tig0004930:7908-7927	Msa1341890:intergenic	30.0%
!!!	CTTCATGCTATTTTTGTTTG+TGG	-	tig0004930:7910-7929	Msa1341890:intergenic	30.0%
	CACAAACAAAAATAGCATGA+AGG	+	tig0004930:7908-7927	Msa1341890:intron	30.0%
	TTTGTTCTGGCAAAATACAA+GGG	-	tig0004930:8072-8091	Msa1341890:intergenic	30.0%
	ATTTGTTCTGGCAAAATACA+AGG	-	tig0004930:8073-8092	Msa1341890:intergenic	30.0%
!	TATTTTGCCAGAACAAATGA+AGG	+	tig0004930:8075-8094	Msa1341890:intron	30.0%
!!	TTTGGTTGATAAATGTGTAG+TGG	+	tig0004930:8211-8230	Msa1341890:intron	30.0%
	TGCTTGGGATAACATTAATT+TGG	+	tig0004930:8279-8298	Msa1341890:CDS	30.0%
	GCCAAAAAGTAATTATAGTC+CGG	+	tig0004930:8495-8514	Msa1341890:intron	30.0%
!!	TCCGGACTATAATTACTTTT+TGG	-	tig0004930:8499-8518	Msa1341890:intergenic	30.0%
!	CAAATAAGATAATGGTAGGA+TGG	-	tig0004930:8555-8574	Msa1341890:intergenic	30.0%
	GTGTTCAAAATGACTTATTG+AGG	-	tig0004930:8578-8597	Msa1341890:intergenic	30.0%
	TTTAACAGGCAAAGAAAATG+TGG	-	tig0004930:8764-8783	Msa1341890:intergenic	30.0%
	GAAGGAACATTCTTAGTAAT+TGG	-	tig0004930:8881-8900	Msa1341890:intergenic	30.0%
	ATACCAGAAGAAATATTGGT+AGG	-	tig0004930:8923-8942	Msa1341890:intergenic	30.0%
	CAATCACTGACAATATATAG+AGG	-	tig0004930:9047-9066	Msa1341890:intergenic	30.0%
	CTCTATATATTGTCAGTGAT+TGG	+	tig0004930:9045-9064	Msa1341890:CDS	30.0%
	ATACTAAGTTGTCCTCTTTA+TGG	+	tig0004930:9257-9276	Msa1341890:intron	30.0%
	AAACCTTATCAACCATAAAG+AGG	-	tig0004930:9272-9291	Msa1341890:intergenic	30.0%
	TCATATCGATCATACACAAT+TGG	-	tig0004930:9314-9333	Msa1341890:intergenic	30.0%
	AATTGTGTATGATCGATATG+AGG	+	tig0004930:9313-9332	Msa1341890:CDS	30.0%
	TGAGGAAGAAATTAACAATC+TGG	+	tig0004930:9331-9350	Msa1341890:CDS	30.0%
	ATCTGAGGAAGAAATATAGA+AGG	+	tig0004930:9372-9391	Msa1341890:CDS	30.0%
	AATGGGGATTGTACAAAAAT+TGG	+	tig0004930:9588-9607	Msa1341890:three_prime_UTR	30.0%
	ATGGGGATTGTACAAAAATT+GGG	+	tig0004930:9589-9608	Msa1341890:three_prime_UTR	30.0%
	TTGTACAAAAATTGGGATGA+TGG	+	tig0004930:9596-9615	Msa1341890:three_prime_UTR	30.0%
	TGGAGGTTTCTTAAACTTGA+GGG	-	tig0004930:7597-7616	Msa1372970:intergenic	35.0%
	TTGGAGGTTTCTTAAACTTG+AGG	-	tig0004930:7598-7617	Msa1372970:intergenic	35.0%
	CTCAATACTGAAGTAAGGTA+TGG	-	tig0004930:7622-7641	Msa1372970:intergenic	35.0%
	TCATGCTCAATACTGAAGTA+AGG	-	tig0004930:7627-7646	Msa1372970:intergenic	35.0%
	AAGCCACTTCATGAAATTCT+TGG	+	tig0004930:7803-7822	Msa1341890:CDS	35.0%
	GTAAGAGAAAGTGACAAAGA+TGG	-	tig0004930:7845-7864	Msa1341890:intergenic	35.0%
	TGTACTCAACAACCTCAAAT+AGG	-	tig0004930:8307-8326	Msa1341890:intergenic	35.0%
!	TAGGTATATCACAAGCATTG+TGG	-	tig0004930:8363-8382	Msa1341890:intergenic	35.0%
	CAATGCTTGTGATATACCTA+TGG	+	tig0004930:8363-8382	Msa1341890:CDS	35.0%
	CACTTGCAGATATCTTGAAA+TGG	+	tig0004930:8390-8409	Msa1341890:CDS	35.0%
	TTATAGTCCGGACTCAATTA+AGG	+	tig0004930:8507-8526	Msa1341890:intron	35.0%
!	GAGGCAAATAAGATAATGGT+AGG	-	tig0004930:8559-8578	Msa1341890:intergenic	35.0%
	ACATGAGCTGATAACTTTGA+AGG	+	tig0004930:8596-8615	Msa1341890:intron	35.0%
!	AAAACAGTTTCTAGGAACTG+CGG	-	tig0004930:8807-8826	Msa1341890:intergenic	35.0%
!	GTAATTGGTTCAATCTTCTG+TGG	-	tig0004930:8866-8885	Msa1341890:intergenic	35.0%
!	TGTCCTCTTTATGGTTGATA+AGG	+	tig0004930:9266-9285	Msa1341890:intron	35.0%
	GAAGAAATTAACAATCTGGC+TGG	+	tig0004930:9335-9354	Msa1341890:CDS	35.0%
	TATCTCAACAAAATTCCACG+AGG	+	tig0004930:9407-9426	Msa1341890:CDS	35.0%
!	GTGATTTTCTTTTCCTTCAC+TGG	-	tig0004930:9434-9453	Msa1341890:intergenic	35.0%
	TGGAGGTTTCTTAAACTTGA+GGG	-	tig0004930:7597-7616	Msa1341890:intergenic	35.0%
	TTGGAGGTTTCTTAAACTTG+AGG	-	tig0004930:7598-7617	Msa1341890:intergenic	35.0%
	CTCAATACTGAAGTAAGGTA+TGG	-	tig0004930:7622-7641	Msa1341890:intergenic	35.0%
	TCATGCTCAATACTGAAGTA+AGG	-	tig0004930:7627-7646	Msa1341890:intergenic	35.0%
	AAGCCACTTCATGAAATTCT+TGG	+	tig0004930:7803-7822	Msa1341890:CDS	35.0%
	GTAAGAGAAAGTGACAAAGA+TGG	-	tig0004930:7845-7864	Msa1341890:intergenic	35.0%
	TGTACTCAACAACCTCAAAT+AGG	-	tig0004930:8307-8326	Msa1341890:intergenic	35.0%
!	TAGGTATATCACAAGCATTG+TGG	-	tig0004930:8363-8382	Msa1341890:intergenic	35.0%
	CAATGCTTGTGATATACCTA+TGG	+	tig0004930:8363-8382	Msa1341890:CDS	35.0%
	CACTTGCAGATATCTTGAAA+TGG	+	tig0004930:8390-8409	Msa1341890:CDS	35.0%
	TTATAGTCCGGACTCAATTA+AGG	+	tig0004930:8507-8526	Msa1341890:intron	35.0%
!	GAGGCAAATAAGATAATGGT+AGG	-	tig0004930:8559-8578	Msa1341890:intergenic	35.0%
	ACATGAGCTGATAACTTTGA+AGG	+	tig0004930:8596-8615	Msa1341890:intron	35.0%
!	AAAACAGTTTCTAGGAACTG+CGG	-	tig0004930:8807-8826	Msa1341890:intergenic	35.0%
!	GTAATTGGTTCAATCTTCTG+TGG	-	tig0004930:8866-8885	Msa1341890:intergenic	35.0%
!	TGTCCTCTTTATGGTTGATA+AGG	+	tig0004930:9266-9285	Msa1341890:intron	35.0%
	GAAGAAATTAACAATCTGGC+TGG	+	tig0004930:9335-9354	Msa1341890:CDS	35.0%
	TATCTCAACAAAATTCCACG+AGG	+	tig0004930:9407-9426	Msa1341890:CDS	35.0%
!	GTGATTTTCTTTTCCTTCAC+TGG	-	tig0004930:9434-9453	Msa1341890:intergenic	35.0%
	TACTGAAGTAAGGTATGGCT+TGG	-	tig0004930:7617-7636	Msa1372970:intergenic	40.0%
!	TCATGAAGTGGCTTTTCATG+TGG	-	tig0004930:7797-7816	Msa1341890:intergenic	40.0%
	CCACCAAGAATTTCATGAAG+TGG	-	tig0004930:7809-7828	Msa1341890:intergenic	40.0%
	CCACTTCATGAAATTCTTGG+TGG	+	tig0004930:7806-7825	Msa1341890:CDS	40.0%
	CTTCATGAAATTCTTGGTGG+AGG	+	tig0004930:7809-7828	Msa1341890:CDS	40.0%
	GAAATTCTTGGTGGAGGAAA+AGG	+	tig0004930:7815-7834	Msa1341890:CDS	40.0%
	CCTAACACCTTCATTTGTTC+TGG	-	tig0004930:8085-8104	Msa1341890:intergenic	40.0%
!!	CCAGAACAAATGAAGGTGTT+AGG	+	tig0004930:8082-8101	Msa1341890:intron	40.0%
!	TAGTGGCTGATGTGTTGTTA+TGG	+	tig0004930:8228-8247	Msa1341890:intron	40.0%
!	TATCAGCTGCGTTTTTGCTT+GGG	+	tig0004930:8264-8283	Msa1341890:CDS	40.0%
!	TATCACAAGCATTGTGGTGA+TGG	-	tig0004930:8357-8376	Msa1341890:intergenic	40.0%
	TATCTGCAAGTGTAGACCAT+AGG	-	tig0004930:8382-8401	Msa1341890:intergenic	40.0%
	GCAACATATATGCATGCTAG+TGG	-	tig0004930:8477-8496	Msa1341890:intergenic	40.0%
	AGTGAGTCCTTAATTGAGTC+CGG	-	tig0004930:8517-8536	Msa1341890:intergenic	40.0%
	ATGTTCCTTCACATATCGTG+TGG	+	tig0004930:8891-8910	Msa1341890:CDS	40.0%
	GGACCTACCAATATTTCTTC+TGG	+	tig0004930:8917-8936	Msa1341890:CDS	40.0%
	GACATGTCATAGTAGATCTG+AGG	+	tig0004930:9357-9376	Msa1341890:CDS	40.0%
	TCACATGCTATACATGGCAA+TGG	+	tig0004930:9570-9589	Msa1341890:three_prime_UTR	40.0%
	CACATGCTATACATGGCAAT+GGG	+	tig0004930:9571-9590	Msa1341890:three_prime_UTR	40.0%
	ACATGCTATACATGGCAATG+GGG	+	tig0004930:9572-9591	Msa1341890:three_prime_UTR	40.0%
!!	TGAGGGTCATTTTGCATCTT+TGG	-	tig0004930:7580-7599	Msa1341890:intergenic	40.0%
	TACTGAAGTAAGGTATGGCT+TGG	-	tig0004930:7617-7636	Msa1341890:intergenic	40.0%
!	TCATGAAGTGGCTTTTCATG+TGG	-	tig0004930:7797-7816	Msa1341890:intergenic	40.0%
	CCACCAAGAATTTCATGAAG+TGG	-	tig0004930:7809-7828	Msa1341890:intergenic	40.0%
	CCACTTCATGAAATTCTTGG+TGG	+	tig0004930:7806-7825	Msa1341890:CDS	40.0%
	CTTCATGAAATTCTTGGTGG+AGG	+	tig0004930:7809-7828	Msa1341890:CDS	40.0%
	GAAATTCTTGGTGGAGGAAA+AGG	+	tig0004930:7815-7834	Msa1341890:CDS	40.0%
	CCTAACACCTTCATTTGTTC+TGG	-	tig0004930:8085-8104	Msa1341890:intergenic	40.0%
!!	CCAGAACAAATGAAGGTGTT+AGG	+	tig0004930:8082-8101	Msa1341890:intron	40.0%
!	TAGTGGCTGATGTGTTGTTA+TGG	+	tig0004930:8228-8247	Msa1341890:intron	40.0%
!	TATCAGCTGCGTTTTTGCTT+GGG	+	tig0004930:8264-8283	Msa1341890:CDS	40.0%
!	TATCACAAGCATTGTGGTGA+TGG	-	tig0004930:8357-8376	Msa1341890:intergenic	40.0%
	TATCTGCAAGTGTAGACCAT+AGG	-	tig0004930:8382-8401	Msa1341890:intergenic	40.0%
	GCAACATATATGCATGCTAG+TGG	-	tig0004930:8477-8496	Msa1341890:intergenic	40.0%
	AGTGAGTCCTTAATTGAGTC+CGG	-	tig0004930:8517-8536	Msa1341890:intergenic	40.0%
	ATGTTCCTTCACATATCGTG+TGG	+	tig0004930:8891-8910	Msa1341890:CDS	40.0%
	GGACCTACCAATATTTCTTC+TGG	+	tig0004930:8917-8936	Msa1341890:CDS	40.0%
	GACATGTCATAGTAGATCTG+AGG	+	tig0004930:9357-9376	Msa1341890:CDS	40.0%
	TCACATGCTATACATGGCAA+TGG	+	tig0004930:9570-9589	Msa1341890:three_prime_UTR	40.0%
	CACATGCTATACATGGCAAT+GGG	+	tig0004930:9571-9590	Msa1341890:three_prime_UTR	40.0%
	ACATGCTATACATGGCAATG+GGG	+	tig0004930:9572-9591	Msa1341890:three_prime_UTR	40.0%
!	TGAAGTAAGGTATGGCTTGG+AGG	-	tig0004930:7614-7633	Msa1372970:intergenic	45.0%
!	TGGCTGATGTGTTGTTATGG+AGG	+	tig0004930:8231-8250	Msa1341890:CDS	45.0%
!	GGCTGATGTGTTGTTATGGA+GGG	+	tig0004930:8232-8251	Msa1341890:CDS	45.0%
!	GTATCAGCTGCGTTTTTGCT+TGG	+	tig0004930:8263-8282	Msa1341890:CDS	45.0%
	GGACAATGAAAGCAAGCTCT+TGG	-	tig0004930:8845-8864	Msa1341890:intergenic	45.0%
	CCTTCACATATCGTGTGGAA+CGG	+	tig0004930:8896-8915	Msa1341890:CDS	45.0%
!	TGAAGTAAGGTATGGCTTGG+AGG	-	tig0004930:7614-7633	Msa1341890:intergenic	45.0%
!	TGGCTGATGTGTTGTTATGG+AGG	+	tig0004930:8231-8250	Msa1341890:CDS	45.0%
!	GGCTGATGTGTTGTTATGGA+GGG	+	tig0004930:8232-8251	Msa1341890:CDS	45.0%
!	GTATCAGCTGCGTTTTTGCT+TGG	+	tig0004930:8263-8282	Msa1341890:CDS	45.0%
	GGACAATGAAAGCAAGCTCT+TGG	-	tig0004930:8845-8864	Msa1341890:intergenic	45.0%
	CCTTCACATATCGTGTGGAA+CGG	+	tig0004930:8896-8915	Msa1341890:CDS	45.0%
!!!	ATTTTATTTATTATTTGATT+TGG	+	tig0004930:7865-7884	Msa1341890:intron	5.0%
!!!	ATTTTATTTATTATTTGATT+TGG	+	tig0004930:7865-7884	Msa1341890:intron	5.0%
	CCGTTCCACACGATATGTGA+AGG	-	tig0004930:8899-8918	Msa1341890:intergenic	50.0%
	AATTCCACGAGGACCAGTGA+AGG	+	tig0004930:9418-9437	Msa1341890:CDS	50.0%
!	TTTTCCTTCACTGGTCCTCG+TGG	-	tig0004930:9425-9444	Msa1341890:intergenic	50.0%
	CCGTTCCACACGATATGTGA+AGG	-	tig0004930:8899-8918	Msa1341890:intergenic	50.0%
	AATTCCACGAGGACCAGTGA+AGG	+	tig0004930:9418-9437	Msa1341890:CDS	50.0%
!	TTTTCCTTCACTGGTCCTCG+TGG	-	tig0004930:9425-9444	Msa1341890:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
tig0004930	gene	7578	9652	7578	ID=Msa1341890;Name=Msa1341890
tig0004930	mRNA	7578	9652	7578	ID=Msa1341890-mRNA-1;Parent=Msa1341890;Name=Msa1341890-mRNA-1;_AED=0.14;_eAED=0.14;_QI=126\|1\|1\|1\|1\|1\|5\|195\|231
tig0004930	exon	7578	7836	7578	ID=Msa1341890-mRNA-1:exon:3382;Parent=Msa1341890-mRNA-1
tig0004930	exon	8231	8411	8231	ID=Msa1341890-mRNA-1:exon:3383;Parent=Msa1341890-mRNA-1
tig0004930	exon	8797	8938	8797	ID=Msa1341890-mRNA-1:exon:3384;Parent=Msa1341890-mRNA-1
tig0004930	exon	9033	9102	9033	ID=Msa1341890-mRNA-1:exon:3385;Parent=Msa1341890-mRNA-1
tig0004930	exon	9288	9652	9288	ID=Msa1341890-mRNA-1:exon:3386;Parent=Msa1341890-mRNA-1
tig0004930	five_prime_UTR	7578	7703	7578	ID=Msa1341890-mRNA-1:five_prime_utr;Parent=Msa1341890-mRNA-1
tig0004930	CDS	7704	7836	7704	ID=Msa1341890-mRNA-1:cds;Parent=Msa1341890-mRNA-1
tig0004930	CDS	8231	8411	8231	ID=Msa1341890-mRNA-1:cds;Parent=Msa1341890-mRNA-1
tig0004930	CDS	8797	8938	8797	ID=Msa1341890-mRNA-1:cds;Parent=Msa1341890-mRNA-1
tig0004930	CDS	9033	9102	9033	ID=Msa1341890-mRNA-1:cds;Parent=Msa1341890-mRNA-1
tig0004930	CDS	9288	9457	9288	ID=Msa1341890-mRNA-1:cds;Parent=Msa1341890-mRNA-1
tig0004930	three_prime_UTR	9458	9652	9458	ID=Msa1341890-mRNA-1:three_prime_utr;Parent=Msa1341890-mRNA-1

Gene Sequence

>Msa1341890

ATGCAACAAATTAAGGGAAGTAATATGGCGCATCATAATACATCCTCTGATTCTGATGATGAAATTGGCAAATCTCGAGCAATGATATTTCCACATGAAAAGCCACTTCATGAAATTCTTGGTGGAGGAAAAGTGGCTGATGTGTTGTTATGGAGGGACAGAAATGTATCAGCTGCGTTTTTGCTTGGGATAACATTAATTTGGTTCCTATTTGAGGTTGTTGAGTACAATATTGTGACACTTCTTTGTCACATTTCCATCACCACAATGCTTGTGATATACCTATGGTCTACACTTGCAGATATCTTGAAATGGAATGGTCCGCAGTTCCTAGAAACTGTTTTACAAGAATCTTTCTTCCAAGAGCTTGCTTTCATTGTCCACAGAAGATTGAACCAATTACTAAGAATGTTCCTTCACATATCGTGTGGAACGGACCTACCAATATTTCTTCTGATCAATGTTTGCCTCTATATATTGTCAGTGATTGGAACCTACTTCAACTTTATCAATTTGCTATATATTGGTTTTCTTTGTATACAAACACTGCCAATTGTGTATGATCGATATGAGGAAGAAATTAACAATCTGGCTGGACATGTCATAGTAGATCTGAGGAAGAAATATAGAAGGTTTAAGAAAAGATATCTCAACAAAATTCCACGAGGACCAGTGAAGGAAAAGAAAATCACATAG

Protein sequence

>Msa1341890

MQQIKGSNMAHHNTSSDSDDEIGKSRAMIFPHEKPLHEILGGGKVADVLLWRDRNVSAAFLLGITLIWFLFEVVEYNIVTLLCHISITTMLVIYLWSTLADILKWNGPQFLETVLQESFFQELAFIVHRRLNQLLRMFLHISCGTDLPIFLLINVCLYILSVIGTYFNFINLLYIGFLCIQTLPIVYDRYEEEINNLAGHVIVDLRKKYRRFKKRYLNKIPRGPVKEKKIT*