Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465400 | XP_003601260.2 | 98.810 | 336 | 4 | 0 | 1 | 336 | 1 | 336 | 0.0 | 690 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465400 | sp|Q9FM03|DOF56_ARATH | 42.748 | 393 | 145 | 23 | 1 | 334 | 1 | 372 | 1.25e-54 | 186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465400 | G7J5F5 | 98.810 | 336 | 4 | 0 | 1 | 336 | 1 | 336 | 0.0 | 690 |
Gene ID | Type | Classification |
---|---|---|
Msa0465400 | TF | C2C2-Dof |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002580 | Msa0465400 | 0.811147 | 8.096502e-51 | -8.615850e-47 |
Msa0005890 | Msa0465400 | 0.825893 | 3.656138e-54 | -8.615850e-47 |
Msa0034810 | Msa0465400 | 0.828056 | 1.111637e-54 | -8.615850e-47 |
Msa0071850 | Msa0465400 | 0.809253 | 2.072971e-50 | -8.615850e-47 |
Msa0071860 | Msa0465400 | 0.824698 | 7.009072e-54 | -8.615850e-47 |
Msa0071880 | Msa0465400 | 0.832343 | 9.976429e-56 | -8.615850e-47 |
Msa0081520 | Msa0465400 | 0.802175 | 6.353677e-49 | -8.615850e-47 |
Msa0094780 | Msa0465400 | 0.810241 | 1.271470e-50 | -8.615850e-47 |
Msa0125210 | Msa0465400 | 0.815832 | 7.554749e-52 | -8.615850e-47 |
Msa0129940 | Msa0465400 | 0.842901 | 1.948483e-58 | -8.615850e-47 |
Msa0140320 | Msa0465400 | 0.806887 | 6.613566e-50 | -8.615850e-47 |
Msa0164400 | Msa0465400 | 0.841995 | 3.388537e-58 | -8.615850e-47 |
Msa0175730 | Msa0465400 | 0.835875 | 1.300321e-56 | -8.615850e-47 |
Msa0186920 | Msa0465400 | 0.831900 | 1.284361e-55 | -8.615850e-47 |
Msa0191020 | Msa0465400 | 0.830921 | 2.236076e-55 | -8.615850e-47 |
Msa0194820 | Msa0465400 | 0.847423 | 1.167516e-59 | -8.615850e-47 |
Msa0194840 | Msa0465400 | 0.850050 | 2.181809e-60 | -8.615850e-47 |
Msa0211030 | Msa0465400 | 0.800409 | 1.461164e-48 | -8.615850e-47 |
Msa0225100 | Msa0465400 | 0.812801 | 3.530940e-51 | -8.615850e-47 |
Msa0225860 | Msa0465400 | 0.835142 | 1.993419e-56 | -8.615850e-47 |
Msa0233320 | Msa0465400 | 0.831947 | 1.250019e-55 | -8.615850e-47 |
Msa0367830 | Msa0465400 | 0.808253 | 3.391890e-50 | -8.615850e-47 |
Msa0371170 | Msa0465400 | 0.861337 | 1.101315e-63 | -8.615850e-47 |
Msa0388770 | Msa0465400 | 0.804865 | 1.759687e-49 | -8.615850e-47 |
Msa0405680 | Msa0465400 | 0.814012 | 1.913342e-51 | -8.615850e-47 |
Msa0418970 | Msa0465400 | 0.857030 | 2.154172e-62 | -8.615850e-47 |
Msa0436910 | Msa0465400 | 0.805565 | 1.255669e-49 | -8.615850e-47 |
Msa0460550 | Msa0465400 | 0.820371 | 7.105614e-53 | -8.615850e-47 |
Msa0465400 | Msa0511260 | 0.822593 | 2.180288e-53 | -8.615850e-47 |
Msa0465400 | Msa0524580 | 0.800750 | 1.244682e-48 | -8.615850e-47 |
Msa0465400 | Msa0580370 | 0.824566 | 7.530039e-54 | -8.615850e-47 |
Msa0465400 | Msa0616510 | 0.800998 | 1.107759e-48 | -8.615850e-47 |
Msa0465400 | Msa0699840 | 0.822270 | 2.591320e-53 | -8.615850e-47 |
Msa0465400 | Msa0721080 | 0.807174 | 5.750814e-50 | -8.615850e-47 |
Msa0465400 | Msa0741220 | 0.815107 | 1.095155e-51 | -8.615850e-47 |
Msa0465400 | Msa0742740 | 0.804677 | 1.926041e-49 | -8.615850e-47 |
Msa0465400 | Msa0780270 | 0.814739 | 1.321662e-51 | -8.615850e-47 |
Msa0465400 | Msa0795870 | 0.820865 | 5.471179e-53 | -8.615850e-47 |
Msa0465400 | Msa0823820 | 0.808321 | 3.280547e-50 | -8.615850e-47 |
Msa0465400 | Msa0829300 | 0.836418 | 9.467397e-57 | -8.615850e-47 |
Msa0465400 | Msa0829330 | 0.823187 | 1.584998e-53 | -8.615850e-47 |
Msa0465400 | Msa0833650 | 0.830545 | 2.765560e-55 | -8.615850e-47 |
Msa0465400 | Msa0833760 | 0.802365 | 5.809032e-49 | -8.615850e-47 |
Msa0465400 | Msa0863010 | 0.815271 | 1.006763e-51 | -8.615850e-47 |
Msa0465400 | Msa0902940 | 0.803812 | 2.915445e-49 | -8.615850e-47 |
Msa0465400 | Msa1020630 | 0.808965 | 2.389239e-50 | -8.615850e-47 |
Msa0465400 | Msa1113800 | 0.818124 | 2.308150e-52 | -8.615850e-47 |
Msa0465400 | Msa1132700 | 0.804762 | 1.849083e-49 | -8.615850e-47 |
Msa0465400 | Msa1132840 | 0.821880 | 3.190711e-53 | -8.615850e-47 |
Msa0465400 | Msa1150820 | 0.814028 | 1.897418e-51 | -8.615850e-47 |
Msa0465400 | Msa1160500 | 0.824098 | 9.703255e-54 | -8.615850e-47 |
Msa0465400 | Msa1184330 | 0.831461 | 1.647300e-55 | -8.615850e-47 |
Msa0465400 | Msa1223570 | 0.800802 | 1.214676e-48 | -8.615850e-47 |
Msa0465400 | Msa1227940 | 0.818520 | 1.877877e-52 | -8.615850e-47 |
Msa0465400 | Msa1228200 | 0.809332 | 1.993922e-50 | -8.615850e-47 |
Msa0465400 | Msa1242370 | 0.811984 | 5.325586e-51 | -8.615850e-47 |
Msa0465400 | Msa1263490 | 0.803210 | 3.887116e-49 | -8.615850e-47 |
Msa0465400 | Msa1265650 | 0.808782 | 2.615496e-50 | -8.615850e-47 |
Msa0465400 | Msa1284120 | 0.816778 | 4.639842e-52 | -8.615850e-47 |
Msa0465400 | Msa1303560 | 0.810445 | 1.148833e-50 | -8.615850e-47 |
Msa0465400 | Msa1303650 | 0.803107 | 4.081253e-49 | -8.615850e-47 |
Msa0465400 | Msa1341890 | 0.806583 | 7.664902e-50 | -8.615850e-47 |
Msa0465400 | Msa1351780 | 0.800387 | 1.475872e-48 | -8.615850e-47 |
Msa0465400 | Msa1356830 | 0.803516 | 3.358167e-49 | -8.615850e-47 |
Msa0465400 | Msa1397400 | 0.818186 | 2.234889e-52 | -8.615850e-47 |
Msa0465400 | Msa1420950 | 0.823128 | 1.636111e-53 | -8.615850e-47 |
Msa0465400 | Msa1433810 | 0.805808 | 1.116145e-49 | -8.615850e-47 |
Msa0465400 | Msa1440880 | 0.804003 | 2.660656e-49 | -8.615850e-47 |
Msa0260510 | Msa0465400 | 0.814781 | 1.293405e-51 | -8.615850e-47 |
Msa0266180 | Msa0465400 | 0.800984 | 1.115236e-48 | -8.615850e-47 |
Msa0287740 | Msa0465400 | 0.803344 | 3.645356e-49 | -8.615850e-47 |
Msa0298470 | Msa0465400 | 0.823438 | 1.384881e-53 | -8.615850e-47 |
Msa0300270 | Msa0465400 | 0.805984 | 1.025238e-49 | -8.615850e-47 |
Msa0321620 | Msa0465400 | 0.805659 | 1.199525e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465400 | MtrunA17_Chr3g0117601 | 98.810 | 336 | 4 | 0 | 1 | 336 | 1 | 336 | 0.0 | 690 |
Msa0465400 | MtrunA17_Chr3g0127201 | 34.615 | 312 | 142 | 15 | 43 | 324 | 8 | 287 | 7.81e-39 | 139 |
Msa0465400 | MtrunA17_Chr4g0030051 | 55.039 | 129 | 42 | 3 | 39 | 159 | 21 | 141 | 4.24e-36 | 132 |
Msa0465400 | MtrunA17_Chr2g0326001 | 54.331 | 127 | 45 | 4 | 38 | 155 | 19 | 141 | 9.38e-36 | 131 |
Msa0465400 | MtrunA17_Chr8g0346551 | 52.800 | 125 | 44 | 4 | 45 | 158 | 10 | 130 | 1.52e-35 | 130 |
Msa0465400 | MtrunA17_Chr4g0031411 | 58.491 | 106 | 37 | 3 | 44 | 142 | 55 | 160 | 2.30e-34 | 128 |
Msa0465400 | MtrunA17_Chr2g0328021 | 72.603 | 73 | 18 | 1 | 50 | 122 | 51 | 121 | 6.87e-34 | 126 |
Msa0465400 | MtrunA17_Chr1g0188851 | 53.125 | 128 | 46 | 5 | 41 | 163 | 25 | 143 | 1.22e-33 | 125 |
Msa0465400 | MtrunA17_Chr8g0374251 | 66.197 | 71 | 24 | 0 | 61 | 131 | 68 | 138 | 2.90e-31 | 120 |
Msa0465400 | MtrunA17_Chr4g0010151 | 69.333 | 75 | 20 | 2 | 44 | 115 | 62 | 136 | 9.85e-31 | 119 |
Msa0465400 | MtrunA17_Chr7g0237921 | 60.870 | 92 | 29 | 3 | 27 | 115 | 43 | 130 | 3.89e-30 | 117 |
Msa0465400 | MtrunA17_Chr7g0223311 | 56.122 | 98 | 27 | 3 | 34 | 115 | 34 | 131 | 8.09e-30 | 117 |
Msa0465400 | MtrunA17_Chr8g0367161 | 67.164 | 67 | 22 | 0 | 50 | 116 | 21 | 87 | 8.37e-30 | 116 |
Msa0465400 | MtrunA17_Chr3g0126201 | 71.875 | 64 | 18 | 0 | 52 | 115 | 42 | 105 | 8.42e-30 | 116 |
Msa0465400 | MtrunA17_Chr2g0282441 | 77.049 | 61 | 14 | 0 | 52 | 112 | 16 | 76 | 1.33e-29 | 115 |
Msa0465400 | MtrunA17_Chr4g0047001 | 81.818 | 55 | 10 | 0 | 62 | 116 | 56 | 110 | 1.81e-29 | 116 |
Msa0465400 | MtrunA17_Chr8g0374111 | 55.319 | 94 | 35 | 2 | 52 | 141 | 16 | 106 | 1.11e-28 | 110 |
Msa0465400 | MtrunA17_Chr5g0411951 | 78.571 | 56 | 12 | 0 | 56 | 111 | 38 | 93 | 1.22e-28 | 113 |
Msa0465400 | MtrunA17_Chr1g0177251 | 71.212 | 66 | 19 | 0 | 59 | 124 | 10 | 75 | 2.35e-28 | 111 |
Msa0465400 | MtrunA17_Chr8g0341671 | 74.603 | 63 | 16 | 0 | 56 | 118 | 15 | 77 | 6.54e-28 | 108 |
Msa0465400 | MtrunA17_Chr4g0061761 | 84.314 | 51 | 8 | 0 | 61 | 111 | 40 | 90 | 6.13e-27 | 108 |
Msa0465400 | MtrunA17_Chr2g0282511 | 84.000 | 50 | 8 | 0 | 60 | 109 | 44 | 93 | 4.02e-26 | 105 |
Msa0465400 | MtrunA17_Chr2g0308011 | 82.353 | 51 | 9 | 0 | 59 | 109 | 35 | 85 | 6.36e-26 | 102 |
Msa0465400 | MtrunA17_Chr3g0092111 | 66.667 | 69 | 22 | 1 | 50 | 118 | 126 | 193 | 1.08e-25 | 107 |
Msa0465400 | MtrunA17_Chr2g0282051 | 47.458 | 118 | 42 | 5 | 1 | 116 | 1 | 100 | 2.04e-25 | 103 |
Msa0465400 | MtrunA17_Chr4g0047761 | 76.786 | 56 | 12 | 1 | 61 | 116 | 72 | 126 | 6.42e-25 | 102 |
Msa0465400 | MtrunA17_Chr7g0217581 | 43.697 | 119 | 59 | 2 | 25 | 136 | 190 | 307 | 3.45e-24 | 103 |
Msa0465400 | MtrunA17_Chr4g0042481 | 60.870 | 69 | 26 | 1 | 50 | 118 | 112 | 179 | 4.43e-24 | 102 |
Msa0465400 | MtrunA17_Chr6g0453321 | 44.545 | 110 | 54 | 1 | 30 | 132 | 98 | 207 | 5.64e-24 | 102 |
Msa0465400 | MtrunA17_Chr7g0254161 | 42.342 | 111 | 58 | 2 | 20 | 130 | 66 | 170 | 1.04e-23 | 100 |
Msa0465400 | MtrunA17_Chr6g0460721 | 42.478 | 113 | 57 | 4 | 7 | 119 | 43 | 147 | 2.41e-23 | 98.6 |
Msa0465400 | MtrunA17_Chr8g0355261 | 53.333 | 75 | 34 | 1 | 41 | 115 | 99 | 172 | 4.83e-23 | 99.0 |
Msa0465400 | MtrunA17_Chr6g0460731 | 55.714 | 70 | 30 | 1 | 50 | 119 | 86 | 154 | 7.19e-23 | 97.8 |
Msa0465400 | MtrunA17_Chr5g0417571 | 41.600 | 125 | 55 | 3 | 12 | 118 | 71 | 195 | 2.81e-22 | 95.5 |
Msa0465400 | MtrunA17_Chr2g0283811 | 66.667 | 54 | 18 | 0 | 61 | 114 | 47 | 100 | 3.48e-22 | 91.3 |
Msa0465400 | MtrunA17_Chr5g0417601 | 63.793 | 58 | 21 | 0 | 57 | 114 | 136 | 193 | 1.43e-20 | 91.7 |
Msa0465400 | MtrunA17_Chr5g0417561 | 45.161 | 93 | 47 | 1 | 26 | 114 | 80 | 172 | 3.19e-20 | 90.1 |
Msa0465400 | MtrunA17_Chr5g0417551 | 68.519 | 54 | 17 | 0 | 61 | 114 | 127 | 180 | 6.85e-20 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465400 | AT5G62940.1 | 42.748 | 393 | 145 | 23 | 1 | 334 | 1 | 372 | 1.27e-55 | 186 |
Msa0465400 | AT5G60200.1 | 66.292 | 89 | 27 | 3 | 33 | 121 | 30 | 115 | 2.49e-35 | 129 |
Msa0465400 | AT1G51700.1 | 47.656 | 128 | 54 | 2 | 56 | 170 | 28 | 155 | 7.09e-33 | 121 |
Msa0465400 | AT2G28510.1 | 56.364 | 110 | 35 | 2 | 63 | 160 | 50 | 158 | 5.21e-32 | 121 |
Msa0465400 | AT3G45610.1 | 43.373 | 166 | 68 | 7 | 54 | 212 | 32 | 178 | 2.41e-31 | 118 |
Msa0465400 | AT4G24060.1 | 50.000 | 122 | 46 | 2 | 50 | 156 | 42 | 163 | 2.72e-31 | 120 |
Msa0465400 | AT5G02460.1 | 70.667 | 75 | 19 | 2 | 44 | 115 | 75 | 149 | 5.15e-31 | 121 |
Msa0465400 | AT3G55370.1 | 65.000 | 80 | 25 | 2 | 43 | 119 | 55 | 134 | 7.19e-31 | 119 |
Msa0465400 | AT3G55370.2 | 65.000 | 80 | 25 | 2 | 43 | 119 | 55 | 134 | 8.81e-31 | 119 |
Msa0465400 | AT3G55370.3 | 65.000 | 80 | 25 | 2 | 43 | 119 | 100 | 179 | 1.30e-30 | 119 |
Msa0465400 | AT2G37590.1 | 64.474 | 76 | 24 | 1 | 44 | 116 | 69 | 144 | 1.74e-30 | 118 |
Msa0465400 | AT1G07640.1 | 69.444 | 72 | 19 | 1 | 47 | 115 | 4 | 75 | 6.32e-30 | 115 |
Msa0465400 | AT5G60850.1 | 66.234 | 77 | 20 | 1 | 50 | 120 | 34 | 110 | 6.70e-30 | 116 |
Msa0465400 | AT1G07640.2 | 69.444 | 72 | 19 | 1 | 47 | 115 | 60 | 131 | 1.09e-29 | 116 |
Msa0465400 | AT1G07640.3 | 69.444 | 72 | 19 | 1 | 47 | 115 | 68 | 139 | 1.21e-29 | 116 |
Msa0465400 | AT1G64620.1 | 52.672 | 131 | 47 | 3 | 45 | 164 | 33 | 159 | 1.76e-29 | 116 |
Msa0465400 | AT3G61850.2 | 65.753 | 73 | 23 | 1 | 46 | 118 | 49 | 119 | 3.49e-29 | 114 |
Msa0465400 | AT3G61850.3 | 65.753 | 73 | 23 | 1 | 46 | 118 | 49 | 119 | 3.49e-29 | 114 |
Msa0465400 | AT5G65590.1 | 62.963 | 81 | 25 | 1 | 35 | 115 | 20 | 95 | 3.83e-29 | 114 |
Msa0465400 | AT3G61850.1 | 65.753 | 73 | 23 | 1 | 46 | 118 | 61 | 131 | 3.89e-29 | 114 |
Msa0465400 | AT3G61850.5 | 65.753 | 73 | 23 | 1 | 46 | 118 | 49 | 119 | 5.87e-29 | 114 |
Msa0465400 | AT3G61850.4 | 65.753 | 73 | 23 | 1 | 46 | 118 | 61 | 131 | 6.09e-29 | 114 |
Msa0465400 | AT3G52440.1 | 68.182 | 66 | 21 | 0 | 58 | 123 | 22 | 87 | 1.03e-28 | 111 |
Msa0465400 | AT1G28310.1 | 82.143 | 56 | 10 | 0 | 61 | 116 | 27 | 82 | 1.39e-28 | 112 |
Msa0465400 | AT3G52440.2 | 68.182 | 66 | 21 | 0 | 58 | 123 | 41 | 106 | 2.02e-28 | 111 |
Msa0465400 | AT1G28310.2 | 82.143 | 56 | 10 | 0 | 61 | 116 | 51 | 106 | 2.16e-28 | 112 |
Msa0465400 | AT1G21340.1 | 69.444 | 72 | 19 | 1 | 63 | 134 | 40 | 108 | 3.01e-28 | 110 |
Msa0465400 | AT3G21270.1 | 54.717 | 106 | 42 | 3 | 61 | 164 | 29 | 130 | 4.88e-28 | 108 |
Msa0465400 | AT4G21050.1 | 59.551 | 89 | 33 | 2 | 54 | 142 | 19 | 104 | 5.91e-28 | 108 |
Msa0465400 | AT2G28810.2 | 65.152 | 66 | 22 | 1 | 47 | 112 | 64 | 128 | 5.95e-28 | 111 |
Msa0465400 | AT2G28810.1 | 65.152 | 66 | 22 | 1 | 47 | 112 | 81 | 145 | 1.06e-27 | 111 |
Msa0465400 | AT4G00940.1 | 53.398 | 103 | 31 | 2 | 63 | 151 | 70 | 169 | 8.91e-27 | 107 |
Msa0465400 | AT4G00940.3 | 53.398 | 103 | 31 | 2 | 63 | 151 | 70 | 169 | 8.91e-27 | 107 |
Msa0465400 | AT4G00940.2 | 53.398 | 103 | 31 | 2 | 63 | 151 | 70 | 169 | 8.91e-27 | 107 |
Msa0465400 | AT2G46590.1 | 55.682 | 88 | 36 | 2 | 22 | 108 | 30 | 115 | 2.59e-26 | 107 |
Msa0465400 | AT4G38000.1 | 60.256 | 78 | 30 | 1 | 41 | 117 | 21 | 98 | 2.62e-26 | 105 |
Msa0465400 | AT2G46590.2 | 55.682 | 88 | 36 | 2 | 22 | 108 | 42 | 127 | 2.97e-26 | 107 |
Msa0465400 | AT3G50410.1 | 75.439 | 57 | 14 | 0 | 61 | 117 | 30 | 86 | 7.29e-26 | 104 |
Msa0465400 | AT5G66940.1 | 70.968 | 62 | 18 | 0 | 61 | 122 | 32 | 93 | 1.06e-25 | 103 |
Msa0465400 | AT1G47655.1 | 73.684 | 57 | 13 | 1 | 55 | 109 | 21 | 77 | 5.92e-25 | 100 |
Msa0465400 | AT3G47500.1 | 63.235 | 68 | 24 | 1 | 51 | 118 | 101 | 167 | 4.87e-24 | 102 |
Msa0465400 | AT5G62430.1 | 46.087 | 115 | 48 | 3 | 50 | 164 | 44 | 144 | 6.02e-24 | 100 |
Msa0465400 | AT5G39660.3 | 63.768 | 69 | 24 | 1 | 50 | 118 | 128 | 195 | 9.95e-24 | 101 |
Msa0465400 | AT5G39660.1 | 63.768 | 69 | 24 | 1 | 50 | 118 | 128 | 195 | 9.95e-24 | 101 |
Msa0465400 | AT5G39660.2 | 63.768 | 69 | 24 | 1 | 50 | 118 | 128 | 195 | 9.95e-24 | 101 |
Msa0465400 | AT1G69570.1 | 64.516 | 62 | 21 | 1 | 53 | 114 | 125 | 185 | 3.91e-23 | 99.4 |
Msa0465400 | AT1G29160.1 | 60.000 | 70 | 26 | 1 | 45 | 114 | 48 | 115 | 4.48e-23 | 94.7 |
Msa0465400 | AT2G34140.1 | 47.253 | 91 | 36 | 1 | 24 | 114 | 33 | 111 | 1.46e-22 | 93.2 |
Msa0465400 | AT4G21040.1 | 57.971 | 69 | 29 | 0 | 63 | 131 | 27 | 95 | 4.59e-22 | 93.6 |
Msa0465400 | AT1G26790.1 | 53.333 | 75 | 35 | 0 | 58 | 132 | 108 | 182 | 8.63e-22 | 95.1 |
Msa0465400 | AT4G21080.1 | 56.000 | 75 | 30 | 1 | 63 | 134 | 27 | 101 | 4.24e-21 | 91.3 |
Msa0465400 | AT4G21030.1 | 55.556 | 63 | 25 | 1 | 50 | 112 | 13 | 72 | 6.51e-15 | 72.8 |
Find 116 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTGTTCTCCATGAAATT+AGG | 0.146876 | 3_3:+65734041 | None:intergenic |
AGTAAGTTAGAAGGCATAAT+TGG | 0.168612 | 3_3:-65733966 | Msa0465400:CDS |
TCTCACCTAAGTAACTTATT+TGG | 0.188613 | 3_3:-65734086 | Msa0465400:CDS |
TAGCAATGGTGCTTATTTAA+TGG | 0.193039 | 3_3:-65733784 | Msa0465400:CDS |
AAAGAAAGTTGAAGATCTTT+AGG | 0.198842 | 3_3:+65734125 | None:intergenic |
CATTCAAGTGACAATAGTTT+AGG | 0.231938 | 3_3:+65733684 | None:intergenic |
TGCCTTGGTGTGTTTCCTTT+TGG | 0.256108 | 3_3:-65733311 | Msa0465400:three_prime_UTR |
ACTTGTTCTCCATGAAATTA+GGG | 0.276978 | 3_3:+65734042 | None:intergenic |
GATATGATGAATGGACAAAA+TGG | 0.284919 | 3_3:-65733864 | Msa0465400:CDS |
TTTGGAGCTAATGGAGCATT+AGG | 0.302981 | 3_3:-65734068 | Msa0465400:CDS |
TGATCATATGAATATGAATA+TGG | 0.304551 | 3_3:-65733904 | Msa0465400:CDS |
AGTAACTTATTTGGAGCTAA+TGG | 0.308114 | 3_3:-65734077 | Msa0465400:CDS |
GTTCCTAAGTGTTCCTCCTT+TGG | 0.313562 | 3_3:+65734268 | None:intergenic |
TTCTCTTCACGTCTGCAATA+TGG | 0.315298 | 3_3:-65735006 | Msa0465400:CDS |
AAGAAAGTTGAAGATCTTTA+GGG | 0.315430 | 3_3:+65734126 | None:intergenic |
ATTCAAGTGACAATAGTTTA+GGG | 0.332848 | 3_3:+65733685 | None:intergenic |
ACACACCAAGGCAGTAGATT+TGG | 0.347710 | 3_3:+65733321 | None:intergenic |
ATGAATATGGGTGTTGGGAT+TGG | 0.368536 | 3_3:-65733891 | Msa0465400:CDS |
GTTGTTGTAGTAGCAGAATT+TGG | 0.376869 | 3_3:+65734343 | None:intergenic |
CTTTCCATCATGAAGTCAAT+AGG | 0.377139 | 3_3:+65733987 | None:intergenic |
TTTCTACAGCCTCCACCAAC+AGG | 0.392353 | 3_3:+65734242 | None:intergenic |
AAAGGTCAGTCATTTGGATA+TGG | 0.392934 | 3_3:-65733630 | Msa0465400:CDS |
GCAAGACTTGTAGAAGGTAT+TGG | 0.393470 | 3_3:-65734292 | Msa0465400:CDS |
AAAGTGATTGATTAGGTCAT+TGG | 0.395429 | 3_3:+65733517 | None:intergenic |
GCTGGAAAAGGTCAGTCATT+TGG | 0.395618 | 3_3:-65733636 | Msa0465400:CDS |
ATTAGGAAACCCTAATTTCA+TGG | 0.397565 | 3_3:-65734051 | Msa0465400:CDS |
CGACACGTCATGGAAGCTTT+AGG | 0.404008 | 3_3:-65733258 | Msa0465400:three_prime_UTR |
AGTGACAATAGTTTAGGGTT+TGG | 0.405871 | 3_3:+65733690 | None:intergenic |
GTTGTGTTGTGGTTGCTACA+TGG | 0.420708 | 3_3:+65735244 | None:intergenic |
TTTGGTGGAATGTCATTTGA+TGG | 0.425628 | 3_3:-65733816 | Msa0465400:CDS |
TCCTCATCATTAGCATCATA+TGG | 0.425855 | 3_3:+65733738 | None:intergenic |
GTAAGTTAGAAGGCATAATT+GGG | 0.426365 | 3_3:-65733965 | Msa0465400:CDS |
GCGTTTCTTTCTATAAATCA+AGG | 0.427761 | 3_3:-65733410 | Msa0465400:three_prime_UTR |
TGTTAAGTGAGAAGAGATAG+AGG | 0.437368 | 3_3:+65735186 | None:intergenic |
TATGAAGAAAGTGATTGATT+AGG | 0.437988 | 3_3:+65733510 | None:intergenic |
TAGCTCCAAATAAGTTACTT+AGG | 0.442973 | 3_3:+65734081 | None:intergenic |
AGGTGAGAGAATTGCACATC+AGG | 0.445358 | 3_3:+65734101 | None:intergenic |
ATCTGCAGATCATTGGTTGC+AGG | 0.446436 | 3_3:-65734979 | Msa0465400:intron |
ATGTAACATCGAGGAAGATA+TGG | 0.449127 | 3_3:-65733219 | Msa0465400:three_prime_UTR |
ATATACATAAAGTCTTTGTA+TGG | 0.454485 | 3_3:-65733472 | Msa0465400:three_prime_UTR |
TCTTAGCCTCCTCTCTATCA+TGG | 0.458753 | 3_3:+65734415 | None:intergenic |
GATCAAGGTTGCTCTGATGC+TGG | 0.462649 | 3_3:-65733654 | Msa0465400:CDS |
ATGATGGAAAGTAAGTTAGA+AGG | 0.467778 | 3_3:-65733975 | Msa0465400:CDS |
TGGAATCATCTGCAGATCAT+TGG | 0.469488 | 3_3:-65734986 | Msa0465400:CDS |
GAGCTTAGCCGTTGATCAAA+GGG | 0.477519 | 3_3:+65733562 | None:intergenic |
AGTGGTATGATGAATGGTTA+TGG | 0.480178 | 3_3:-65733600 | Msa0465400:CDS |
TTCACACTCGACCCATCTCT+TGG | 0.480929 | 3_3:+65733360 | None:intergenic |
AATATGGGTGTTGGGATTGG+AGG | 0.481246 | 3_3:-65733888 | Msa0465400:CDS |
GGTTGCTCTGATGCTGGAAA+AGG | 0.482324 | 3_3:-65733648 | Msa0465400:CDS |
GGCACAATTCACGATGAGTC+AGG | 0.484101 | 3_3:-65734494 | Msa0465400:CDS |
GATTCATCTTCACCAATGTC+TGG | 0.489933 | 3_3:-65734467 | Msa0465400:CDS |
CATAAAGTCTTTGTATGGGA+GGG | 0.490896 | 3_3:-65733467 | Msa0465400:three_prime_UTR |
CTTGATCACAACTCTGAGCT+TGG | 0.491446 | 3_3:-65735047 | Msa0465400:five_prime_UTR |
GAGAACAAGTATAGCAATGT+TGG | 0.493849 | 3_3:-65734029 | Msa0465400:CDS |
CTCCTCTCTATCATGGATGA+TGG | 0.495201 | 3_3:+65734422 | None:intergenic |
ACTTCTGCAAGACTTGTAGA+AGG | 0.495701 | 3_3:-65734298 | Msa0465400:CDS |
AGAGCTTAGCCGTTGATCAA+AGG | 0.500555 | 3_3:+65733561 | None:intergenic |
CTAAACTATTGTCACTTGAA+TGG | 0.500804 | 3_3:-65733683 | Msa0465400:CDS |
CTTGAATGGCAGCAAGATCA+AGG | 0.502791 | 3_3:-65733669 | Msa0465400:CDS |
ATGAATATGAATATGGGTGT+TGG | 0.503188 | 3_3:-65733897 | Msa0465400:CDS |
AGTCATTTGGATATGGATCA+TGG | 0.505387 | 3_3:-65733623 | Msa0465400:CDS |
GTGACATGCTAACATGTTCA+AGG | 0.508689 | 3_3:-65734445 | Msa0465400:CDS |
TCTTTGTGTGCGACACGTCA+TGG | 0.513722 | 3_3:-65733268 | Msa0465400:three_prime_UTR |
TGAATATGAATATGGGTGTT+GGG | 0.514370 | 3_3:-65733896 | Msa0465400:CDS |
ATCATGAAGTCAATAGGCCT+AGG | 0.516098 | 3_3:+65733993 | None:intergenic |
ACATATTTATATAATCCAAA+AGG | 0.528989 | 3_3:+65733296 | None:intergenic |
TTGTGATCAAGCAGTGTAGT+TGG | 0.535204 | 3_3:+65735059 | None:intergenic |
CGTTTCTTTCTATAAATCAA+GGG | 0.539763 | 3_3:-65733409 | Msa0465400:three_prime_UTR |
ATCCGAGAAGAAAATGAAAG+AGG | 0.539774 | 3_3:+65735146 | None:intergenic |
TTGTGTTGTGGTTGCTACAT+GGG | 0.541396 | 3_3:+65735245 | None:intergenic |
AGAAGAAAATGAAAGAGGAT+AGG | 0.545528 | 3_3:+65735151 | None:intergenic |
CTACTGAATTAACCAAGAGA+TGG | 0.548579 | 3_3:-65733372 | Msa0465400:three_prime_UTR |
CTTAGGAACATCCCTGTTGG+TGG | 0.550577 | 3_3:-65734254 | Msa0465400:CDS |
CAAGTCTTGCAGAAGTACCT+TGG | 0.558008 | 3_3:+65734305 | None:intergenic |
AGGAACATCCCTGTTGGTGG+AGG | 0.558859 | 3_3:-65734251 | Msa0465400:CDS |
TATACATAAAGTCTTTGTAT+GGG | 0.559157 | 3_3:-65733471 | Msa0465400:three_prime_UTR |
CATGTGTTTGTGTTGTGTTG+TGG | 0.559484 | 3_3:+65735233 | None:intergenic |
AGAGTCCAAATCTACTGCCT+TGG | 0.559695 | 3_3:-65733326 | Msa0465400:three_prime_UTR |
TACTGAATTAACCAAGAGAT+GGG | 0.562851 | 3_3:-65733371 | Msa0465400:three_prime_UTR |
ACAACAAACCCTTTGATCAA+CGG | 0.565654 | 3_3:-65733570 | Msa0465400:CDS |
ATATGATGAATGGACAAAAT+GGG | 0.566744 | 3_3:-65733863 | Msa0465400:CDS |
ATTGGAGGAGATATGATGAA+TGG | 0.570060 | 3_3:-65733873 | Msa0465400:CDS |
ACATAAAGTCTTTGTATGGG+AGG | 0.575556 | 3_3:-65733468 | Msa0465400:three_prime_UTR |
ACCTATCCCTAAAATGTCCA+AGG | 0.579764 | 3_3:-65734382 | Msa0465400:CDS |
GATCATATGAATATGAATAT+GGG | 0.580380 | 3_3:-65733903 | Msa0465400:CDS |
TAGGCCTATTGACTTCATGA+TGG | 0.581168 | 3_3:-65733991 | Msa0465400:CDS |
TCATGGAGTGGTATGATGAA+TGG | 0.582721 | 3_3:-65733606 | Msa0465400:CDS |
TTGTGGTTGCTACATGGGAC+GGG | 0.587904 | 3_3:+65735250 | None:intergenic |
TGTAGAAGGTATTGGACCAA+AGG | 0.594254 | 3_3:-65734284 | Msa0465400:CDS |
AATTCACGATGAGTCAGGAA+TGG | 0.596611 | 3_3:-65734489 | Msa0465400:CDS |
GTTATTGTCATTGCATTGCA+AGG | 0.598961 | 3_3:+65735119 | None:intergenic |
GGACCAAAGGAGGAACACTT+AGG | 0.599656 | 3_3:-65734271 | Msa0465400:CDS |
AGGAAGGTACATGATGTGGT+TGG | 0.607867 | 3_3:+65734159 | None:intergenic |
GGTGGAATGTCATTTGATGG+AGG | 0.611132 | 3_3:-65733813 | Msa0465400:CDS |
TCATGAAGTCAATAGGCCTA+GGG | 0.612063 | 3_3:+65733994 | None:intergenic |
GGCCATCATCCATGATAGAG+AGG | 0.614387 | 3_3:-65734424 | Msa0465400:CDS |
GATGGAGGAAACAATAGCAA+TGG | 0.614470 | 3_3:-65733798 | Msa0465400:CDS |
GTTTCTTTCTATAAATCAAG+GGG | 0.615214 | 3_3:-65733408 | Msa0465400:three_prime_UTR |
GGTGAGAGAATTGCACATCA+GGG | 0.615522 | 3_3:+65734102 | None:intergenic |
GTTGTGGTTGCTACATGGGA+CGG | 0.616180 | 3_3:+65735249 | None:intergenic |
TTGGCATGCTTGAAAACCCT+AGG | 0.618350 | 3_3:-65734010 | Msa0465400:CDS |
AGAAGGTATTGGACCAAAGG+AGG | 0.622045 | 3_3:-65734281 | Msa0465400:CDS |
GTTAGCATGTCACCAGACAT+TGG | 0.624948 | 3_3:+65734455 | None:intergenic |
TTCTACAGCCTCCACCAACA+GGG | 0.626747 | 3_3:+65734243 | None:intergenic |
TGGTAGGAAGGTACATGATG+TGG | 0.632743 | 3_3:+65734155 | None:intergenic |
ACACTTAGGAACATCCCTGT+TGG | 0.646210 | 3_3:-65734257 | Msa0465400:CDS |
TTTGGATATGGATCATGGAG+TGG | 0.646639 | 3_3:-65733618 | Msa0465400:CDS |
GTTGATCAAAGGGTTTGTTG+TGG | 0.647747 | 3_3:+65733572 | None:intergenic |
TTTAGGGATAGGTCATGTGG+TGG | 0.663306 | 3_3:+65734392 | None:intergenic |
ACTACAGTCTCTCTCAGCCA+AGG | 0.663924 | 3_3:-65734322 | Msa0465400:CDS |
GTGTGAGTTGAATCACACCT+TGG | 0.665322 | 3_3:+65734365 | None:intergenic |
TCCATATGATGCTAATGATG+AGG | 0.665364 | 3_3:-65733739 | Msa0465400:CDS |
AATGCATGATGAAAATTCTG+TGG | 0.671096 | 3_3:+65733837 | None:intergenic |
CATCATCCATGATAGAGAGG+AGG | 0.679330 | 3_3:-65734421 | Msa0465400:CDS |
ATCCAAAAGGAAACACACCA+AGG | 0.706145 | 3_3:+65733309 | None:intergenic |
TATGCTGTAATGTAACATCG+AGG | 0.752266 | 3_3:-65733228 | Msa0465400:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGAAATTTTGATAATTATTT+TGG | - | chr3_3:65734437-65734456 | Msa0465400:CDS | 10.0% |
!!! | AGAAATTTTGATAATTATTT+TGG | - | chr3_3:65734437-65734456 | Msa0465400:CDS | 10.0% |
!! | AAGATAAGAAAAACAAAATT+AGG | - | chr3_3:65733702-65733721 | Msa0465400:CDS | 15.0% |
!! | AGATAAGAAAAACAAAATTA+GGG | - | chr3_3:65733703-65733722 | Msa0465400:CDS | 15.0% |
!! | ACATATTTATATAATCCAAA+AGG | + | chr3_3:65735077-65735096 | None:intergenic | 15.0% |
!! | AAGATAAGAAAAACAAAATT+AGG | - | chr3_3:65733702-65733721 | Msa0465400:CDS | 15.0% |
!! | AGATAAGAAAAACAAAATTA+GGG | - | chr3_3:65733703-65733722 | Msa0465400:CDS | 15.0% |
!! | ACATATTTATATAATCCAAA+AGG | + | chr3_3:65735077-65735096 | None:intergenic | 15.0% |
!! | TAAACAAAATGAAAGGAAAA+TGG | + | chr3_3:65733441-65733460 | None:intergenic | 20.0% |
!! | AACATGATAAACAAAATGAA+AGG | + | chr3_3:65733448-65733467 | None:intergenic | 20.0% |
!! | ACATGCATTTATCAAATTAA+TGG | - | chr3_3:65733482-65733501 | Msa0465400:three_prime_UTR | 20.0% |
!!! | TTCTTTTATACAAAATTGTC+AGG | - | chr3_3:65733854-65733873 | Msa0465400:CDS | 20.0% |
!!! | TCTTTTATACAAAATTGTCA+GGG | - | chr3_3:65733855-65733874 | Msa0465400:CDS | 20.0% |
!!! | TAAGTGATCATTTGATTTTT+TGG | + | chr3_3:65734171-65734190 | None:intergenic | 20.0% |
!! | TGATCATATGAATATGAATA+TGG | - | chr3_3:65734466-65734485 | Msa0465400:CDS | 20.0% |
!! | GATCATATGAATATGAATAT+GGG | - | chr3_3:65734467-65734486 | Msa0465400:CDS | 20.0% |
!! | ATATACATAAAGTCTTTGTA+TGG | - | chr3_3:65734898-65734917 | Msa0465400:intron | 20.0% |
!! | TATACATAAAGTCTTTGTAT+GGG | - | chr3_3:65734899-65734918 | Msa0465400:intron | 20.0% |
!! | TAAACAAAATGAAAGGAAAA+TGG | + | chr3_3:65733441-65733460 | None:intergenic | 20.0% |
!! | AACATGATAAACAAAATGAA+AGG | + | chr3_3:65733448-65733467 | None:intergenic | 20.0% |
!! | ACATGCATTTATCAAATTAA+TGG | - | chr3_3:65733482-65733501 | Msa0465400:three_prime_UTR | 20.0% |
!!! | TTCTTTTATACAAAATTGTC+AGG | - | chr3_3:65733854-65733873 | Msa0465400:CDS | 20.0% |
!!! | TCTTTTATACAAAATTGTCA+GGG | - | chr3_3:65733855-65733874 | Msa0465400:CDS | 20.0% |
!!! | TAAGTGATCATTTGATTTTT+TGG | + | chr3_3:65734171-65734190 | None:intergenic | 20.0% |
!! | TGATCATATGAATATGAATA+TGG | - | chr3_3:65734466-65734485 | Msa0465400:CDS | 20.0% |
!! | GATCATATGAATATGAATAT+GGG | - | chr3_3:65734467-65734486 | Msa0465400:CDS | 20.0% |
!! | ATATACATAAAGTCTTTGTA+TGG | - | chr3_3:65734898-65734917 | Msa0465400:intron | 20.0% |
!! | TATACATAAAGTCTTTGTAT+GGG | - | chr3_3:65734899-65734918 | Msa0465400:intron | 20.0% |
! | AAATTAATGGTGTAGTAGTT+TGG | - | chr3_3:65733495-65733514 | Msa0465400:three_prime_UTR | 25.0% |
!! | GAAAAGAGAATTTTATGCTT+AGG | - | chr3_3:65733517-65733536 | Msa0465400:three_prime_UTR | 25.0% |
!!! | TTCACTTTTAATCATGAGAT+CGG | + | chr3_3:65733657-65733676 | None:intergenic | 25.0% |
!!! | TGGAATTGGATTATTTTACA+TGG | + | chr3_3:65733774-65733793 | None:intergenic | 25.0% |
!!! | TTAATTTGTCTTGTTGGAAT+TGG | + | chr3_3:65733788-65733807 | None:intergenic | 25.0% |
!!! | AATGTGTTAATTTGTCTTGT+TGG | + | chr3_3:65733794-65733813 | None:intergenic | 25.0% |
! | AAGAAAGTTGAAGATCTTTA+GGG | + | chr3_3:65734247-65734266 | None:intergenic | 25.0% |
! | AAAGAAAGTTGAAGATCTTT+AGG | + | chr3_3:65734248-65734267 | None:intergenic | 25.0% |
! | ATATGATGAATGGACAAAAT+GGG | - | chr3_3:65734507-65734526 | Msa0465400:intron | 25.0% |
! | ATTCAAGTGACAATAGTTTA+GGG | + | chr3_3:65734688-65734707 | None:intergenic | 25.0% |
! | TATGAAGAAAGTGATTGATT+AGG | + | chr3_3:65734863-65734882 | None:intergenic | 25.0% |
! | CGTTTCTTTCTATAAATCAA+GGG | - | chr3_3:65734961-65734980 | Msa0465400:intron | 25.0% |
! | GTTTCTTTCTATAAATCAAG+GGG | - | chr3_3:65734962-65734981 | Msa0465400:intron | 25.0% |
!!! | ATTTTTTGTCTCTATGTTTG+TGG | - | chr3_3:65735236-65735255 | Msa0465400:five_prime_UTR | 25.0% |
!!! | TTTTTTGTCTCTATGTTTGT+GGG | - | chr3_3:65735237-65735256 | Msa0465400:five_prime_UTR | 25.0% |
! | AAATTAATGGTGTAGTAGTT+TGG | - | chr3_3:65733495-65733514 | Msa0465400:three_prime_UTR | 25.0% |
!! | GAAAAGAGAATTTTATGCTT+AGG | - | chr3_3:65733517-65733536 | Msa0465400:three_prime_UTR | 25.0% |
!!! | TTCACTTTTAATCATGAGAT+CGG | + | chr3_3:65733657-65733676 | None:intergenic | 25.0% |
!!! | TGGAATTGGATTATTTTACA+TGG | + | chr3_3:65733774-65733793 | None:intergenic | 25.0% |
!!! | TTAATTTGTCTTGTTGGAAT+TGG | + | chr3_3:65733788-65733807 | None:intergenic | 25.0% |
!!! | AATGTGTTAATTTGTCTTGT+TGG | + | chr3_3:65733794-65733813 | None:intergenic | 25.0% |
! | AAGAAAGTTGAAGATCTTTA+GGG | + | chr3_3:65734247-65734266 | None:intergenic | 25.0% |
! | AAAGAAAGTTGAAGATCTTT+AGG | + | chr3_3:65734248-65734267 | None:intergenic | 25.0% |
! | ATATGATGAATGGACAAAAT+GGG | - | chr3_3:65734507-65734526 | Msa0465400:intron | 25.0% |
! | ATTCAAGTGACAATAGTTTA+GGG | + | chr3_3:65734688-65734707 | None:intergenic | 25.0% |
! | TATGAAGAAAGTGATTGATT+AGG | + | chr3_3:65734863-65734882 | None:intergenic | 25.0% |
! | CGTTTCTTTCTATAAATCAA+GGG | - | chr3_3:65734961-65734980 | Msa0465400:intron | 25.0% |
! | GTTTCTTTCTATAAATCAAG+GGG | - | chr3_3:65734962-65734981 | Msa0465400:intron | 25.0% |
!!! | ATTTTTTGTCTCTATGTTTG+TGG | - | chr3_3:65735236-65735255 | Msa0465400:five_prime_UTR | 25.0% |
!!! | TTTTTTGTCTCTATGTTTGT+GGG | - | chr3_3:65735237-65735256 | Msa0465400:five_prime_UTR | 25.0% |
AGAAGAAAATGAAAGAGGAT+AGG | + | chr3_3:65733222-65733241 | None:intergenic | 30.0% | |
! | ATCCTCTTTCATTTTCTTCT+CGG | - | chr3_3:65733222-65733241 | Msa0465400:three_prime_UTR | 30.0% |
AAAATGGTATACAATGTGCA+TGG | + | chr3_3:65733425-65733444 | None:intergenic | 30.0% | |
CATGATCATTTGAATTGCTA+TGG | - | chr3_3:65733592-65733611 | Msa0465400:CDS | 30.0% | |
GATCTCATGATTAAAAGTGA+AGG | - | chr3_3:65733656-65733675 | Msa0465400:CDS | 30.0% | |
TCTCACCTAAGTAACTTATT+TGG | - | chr3_3:65734284-65734303 | Msa0465400:CDS | 30.0% | |
TAGCTCCAAATAAGTTACTT+AGG | + | chr3_3:65734292-65734311 | None:intergenic | 30.0% | |
! | AGTAACTTATTTGGAGCTAA+TGG | - | chr3_3:65734293-65734312 | Msa0465400:CDS | 30.0% |
ATTAGGAAACCCTAATTTCA+TGG | - | chr3_3:65734319-65734338 | Msa0465400:CDS | 30.0% | |
ACTTGTTCTCCATGAAATTA+GGG | + | chr3_3:65734331-65734350 | None:intergenic | 30.0% | |
TACTTGTTCTCCATGAAATT+AGG | + | chr3_3:65734332-65734351 | None:intergenic | 30.0% | |
! | ATGATGGAAAGTAAGTTAGA+AGG | - | chr3_3:65734395-65734414 | Msa0465400:CDS | 30.0% |
! | AGTAAGTTAGAAGGCATAAT+TGG | - | chr3_3:65734404-65734423 | Msa0465400:CDS | 30.0% |
! | GTAAGTTAGAAGGCATAATT+GGG | - | chr3_3:65734405-65734424 | Msa0465400:CDS | 30.0% |
ATGAATATGAATATGGGTGT+TGG | - | chr3_3:65734473-65734492 | Msa0465400:CDS | 30.0% | |
TGAATATGAATATGGGTGTT+GGG | - | chr3_3:65734474-65734493 | Msa0465400:CDS | 30.0% | |
GATATGATGAATGGACAAAA+TGG | - | chr3_3:65734506-65734525 | Msa0465400:intron | 30.0% | |
AATGCATGATGAAAATTCTG+TGG | + | chr3_3:65734536-65734555 | None:intergenic | 30.0% | |
! | CAGAATTTTCATCATGCATT+TGG | - | chr3_3:65734536-65734555 | Msa0465400:intron | 30.0% |
! | AATTTTCATCATGCATTTGG+TGG | - | chr3_3:65734539-65734558 | Msa0465400:intron | 30.0% |
TAGCAATGGTGCTTATTTAA+TGG | - | chr3_3:65734586-65734605 | Msa0465400:intron | 30.0% | |
CATTCAAGTGACAATAGTTT+AGG | + | chr3_3:65734689-65734708 | None:intergenic | 30.0% | |
! | CTAAACTATTGTCACTTGAA+TGG | - | chr3_3:65734687-65734706 | Msa0465400:intron | 30.0% |
AAAGTGATTGATTAGGTCAT+TGG | + | chr3_3:65734856-65734875 | None:intergenic | 30.0% | |
GCGTTTCTTTCTATAAATCA+AGG | - | chr3_3:65734960-65734979 | Msa0465400:intron | 30.0% | |
TACTGAATTAACCAAGAGAT+GGG | - | chr3_3:65734999-65735018 | Msa0465400:CDS | 30.0% | |
! | TTTTTGTCTCTATGTTTGTG+GGG | - | chr3_3:65735238-65735257 | Msa0465400:five_prime_UTR | 30.0% |
AGAAGAAAATGAAAGAGGAT+AGG | + | chr3_3:65733222-65733241 | None:intergenic | 30.0% | |
! | ATCCTCTTTCATTTTCTTCT+CGG | - | chr3_3:65733222-65733241 | Msa0465400:three_prime_UTR | 30.0% |
AAAATGGTATACAATGTGCA+TGG | + | chr3_3:65733425-65733444 | None:intergenic | 30.0% | |
CATGATCATTTGAATTGCTA+TGG | - | chr3_3:65733592-65733611 | Msa0465400:CDS | 30.0% | |
GATCTCATGATTAAAAGTGA+AGG | - | chr3_3:65733656-65733675 | Msa0465400:CDS | 30.0% | |
TCTCACCTAAGTAACTTATT+TGG | - | chr3_3:65734284-65734303 | Msa0465400:CDS | 30.0% | |
TAGCTCCAAATAAGTTACTT+AGG | + | chr3_3:65734292-65734311 | None:intergenic | 30.0% | |
! | AGTAACTTATTTGGAGCTAA+TGG | - | chr3_3:65734293-65734312 | Msa0465400:CDS | 30.0% |
ATTAGGAAACCCTAATTTCA+TGG | - | chr3_3:65734319-65734338 | Msa0465400:CDS | 30.0% | |
ACTTGTTCTCCATGAAATTA+GGG | + | chr3_3:65734331-65734350 | None:intergenic | 30.0% | |
TACTTGTTCTCCATGAAATT+AGG | + | chr3_3:65734332-65734351 | None:intergenic | 30.0% | |
! | ATGATGGAAAGTAAGTTAGA+AGG | - | chr3_3:65734395-65734414 | Msa0465400:CDS | 30.0% |
! | AGTAAGTTAGAAGGCATAAT+TGG | - | chr3_3:65734404-65734423 | Msa0465400:CDS | 30.0% |
! | GTAAGTTAGAAGGCATAATT+GGG | - | chr3_3:65734405-65734424 | Msa0465400:CDS | 30.0% |
ATGAATATGAATATGGGTGT+TGG | - | chr3_3:65734473-65734492 | Msa0465400:CDS | 30.0% | |
TGAATATGAATATGGGTGTT+GGG | - | chr3_3:65734474-65734493 | Msa0465400:CDS | 30.0% | |
GATATGATGAATGGACAAAA+TGG | - | chr3_3:65734506-65734525 | Msa0465400:intron | 30.0% | |
AATGCATGATGAAAATTCTG+TGG | + | chr3_3:65734536-65734555 | None:intergenic | 30.0% | |
! | CAGAATTTTCATCATGCATT+TGG | - | chr3_3:65734536-65734555 | Msa0465400:intron | 30.0% |
! | AATTTTCATCATGCATTTGG+TGG | - | chr3_3:65734539-65734558 | Msa0465400:intron | 30.0% |
TAGCAATGGTGCTTATTTAA+TGG | - | chr3_3:65734586-65734605 | Msa0465400:intron | 30.0% | |
CATTCAAGTGACAATAGTTT+AGG | + | chr3_3:65734689-65734708 | None:intergenic | 30.0% | |
! | CTAAACTATTGTCACTTGAA+TGG | - | chr3_3:65734687-65734706 | Msa0465400:intron | 30.0% |
AAAGTGATTGATTAGGTCAT+TGG | + | chr3_3:65734856-65734875 | None:intergenic | 30.0% | |
GCGTTTCTTTCTATAAATCA+AGG | - | chr3_3:65734960-65734979 | Msa0465400:intron | 30.0% | |
TACTGAATTAACCAAGAGAT+GGG | - | chr3_3:65734999-65735018 | Msa0465400:CDS | 30.0% | |
! | TTTTTGTCTCTATGTTTGTG+GGG | - | chr3_3:65735238-65735257 | Msa0465400:five_prime_UTR | 30.0% |
TGTTAAGTGAGAAGAGATAG+AGG | + | chr3_3:65733187-65733206 | None:intergenic | 35.0% | |
ATCCGAGAAGAAAATGAAAG+AGG | + | chr3_3:65733227-65733246 | None:intergenic | 35.0% | |
GTTATTGTCATTGCATTGCA+AGG | + | chr3_3:65733254-65733273 | None:intergenic | 35.0% | |
! | ATCACACCTTGGACATTTTA+GGG | + | chr3_3:65733997-65734016 | None:intergenic | 35.0% |
! | AATCACACCTTGGACATTTT+AGG | + | chr3_3:65733998-65734017 | None:intergenic | 35.0% |
GTTGTTGTAGTAGCAGAATT+TGG | + | chr3_3:65734030-65734049 | None:intergenic | 35.0% | |
!!! | ATCTTTAGGGTTTTGATGGT+AGG | + | chr3_3:65734234-65734253 | None:intergenic | 35.0% |
!!! | GAAGATCTTTAGGGTTTTGA+TGG | + | chr3_3:65734238-65734257 | None:intergenic | 35.0% |
GAGAACAAGTATAGCAATGT+TGG | - | chr3_3:65734341-65734360 | Msa0465400:CDS | 35.0% | |
CTTTCCATCATGAAGTCAAT+AGG | + | chr3_3:65734386-65734405 | None:intergenic | 35.0% | |
ATTGGAGGAGATATGATGAA+TGG | - | chr3_3:65734497-65734516 | Msa0465400:CDS | 35.0% | |
! | TTTGGTGGAATGTCATTTGA+TGG | - | chr3_3:65734554-65734573 | Msa0465400:intron | 35.0% |
TCCATATGATGCTAATGATG+AGG | - | chr3_3:65734631-65734650 | Msa0465400:intron | 35.0% | |
TCCTCATCATTAGCATCATA+TGG | + | chr3_3:65734635-65734654 | None:intergenic | 35.0% | |
! | AGTGACAATAGTTTAGGGTT+TGG | + | chr3_3:65734683-65734702 | None:intergenic | 35.0% |
AAAGGTCAGTCATTTGGATA+TGG | - | chr3_3:65734740-65734759 | Msa0465400:intron | 35.0% | |
AGTCATTTGGATATGGATCA+TGG | - | chr3_3:65734747-65734766 | Msa0465400:intron | 35.0% | |
AGTGGTATGATGAATGGTTA+TGG | - | chr3_3:65734770-65734789 | Msa0465400:intron | 35.0% | |
ACAACAAACCCTTTGATCAA+CGG | - | chr3_3:65734800-65734819 | Msa0465400:intron | 35.0% | |
ACATAAAGTCTTTGTATGGG+AGG | - | chr3_3:65734902-65734921 | Msa0465400:intron | 35.0% | |
CATAAAGTCTTTGTATGGGA+GGG | - | chr3_3:65734903-65734922 | Msa0465400:intron | 35.0% | |
CTACTGAATTAACCAAGAGA+TGG | - | chr3_3:65734998-65735017 | Msa0465400:CDS | 35.0% | |
TATGCTGTAATGTAACATCG+AGG | - | chr3_3:65735142-65735161 | Msa0465400:five_prime_UTR | 35.0% | |
ATGTAACATCGAGGAAGATA+TGG | - | chr3_3:65735151-65735170 | Msa0465400:five_prime_UTR | 35.0% | |
TGTTAAGTGAGAAGAGATAG+AGG | + | chr3_3:65733187-65733206 | None:intergenic | 35.0% | |
ATCCGAGAAGAAAATGAAAG+AGG | + | chr3_3:65733227-65733246 | None:intergenic | 35.0% | |
GTTATTGTCATTGCATTGCA+AGG | + | chr3_3:65733254-65733273 | None:intergenic | 35.0% | |
! | ATCACACCTTGGACATTTTA+GGG | + | chr3_3:65733997-65734016 | None:intergenic | 35.0% |
! | AATCACACCTTGGACATTTT+AGG | + | chr3_3:65733998-65734017 | None:intergenic | 35.0% |
GTTGTTGTAGTAGCAGAATT+TGG | + | chr3_3:65734030-65734049 | None:intergenic | 35.0% | |
!!! | ATCTTTAGGGTTTTGATGGT+AGG | + | chr3_3:65734234-65734253 | None:intergenic | 35.0% |
!!! | GAAGATCTTTAGGGTTTTGA+TGG | + | chr3_3:65734238-65734257 | None:intergenic | 35.0% |
GAGAACAAGTATAGCAATGT+TGG | - | chr3_3:65734341-65734360 | Msa0465400:CDS | 35.0% | |
CTTTCCATCATGAAGTCAAT+AGG | + | chr3_3:65734386-65734405 | None:intergenic | 35.0% | |
ATTGGAGGAGATATGATGAA+TGG | - | chr3_3:65734497-65734516 | Msa0465400:CDS | 35.0% | |
! | TTTGGTGGAATGTCATTTGA+TGG | - | chr3_3:65734554-65734573 | Msa0465400:intron | 35.0% |
TCCATATGATGCTAATGATG+AGG | - | chr3_3:65734631-65734650 | Msa0465400:intron | 35.0% | |
TCCTCATCATTAGCATCATA+TGG | + | chr3_3:65734635-65734654 | None:intergenic | 35.0% | |
! | AGTGACAATAGTTTAGGGTT+TGG | + | chr3_3:65734683-65734702 | None:intergenic | 35.0% |
AAAGGTCAGTCATTTGGATA+TGG | - | chr3_3:65734740-65734759 | Msa0465400:intron | 35.0% | |
AGTCATTTGGATATGGATCA+TGG | - | chr3_3:65734747-65734766 | Msa0465400:intron | 35.0% | |
AGTGGTATGATGAATGGTTA+TGG | - | chr3_3:65734770-65734789 | Msa0465400:intron | 35.0% | |
ACAACAAACCCTTTGATCAA+CGG | - | chr3_3:65734800-65734819 | Msa0465400:intron | 35.0% | |
ACATAAAGTCTTTGTATGGG+AGG | - | chr3_3:65734902-65734921 | Msa0465400:intron | 35.0% | |
CATAAAGTCTTTGTATGGGA+GGG | - | chr3_3:65734903-65734922 | Msa0465400:intron | 35.0% | |
CTACTGAATTAACCAAGAGA+TGG | - | chr3_3:65734998-65735017 | Msa0465400:CDS | 35.0% | |
TATGCTGTAATGTAACATCG+AGG | - | chr3_3:65735142-65735161 | Msa0465400:five_prime_UTR | 35.0% | |
ATGTAACATCGAGGAAGATA+TGG | - | chr3_3:65735151-65735170 | Msa0465400:five_prime_UTR | 35.0% | |
TTGTGTTGTGGTTGCTACAT+GGG | + | chr3_3:65733128-65733147 | None:intergenic | 40.0% | |
CATGTGTTTGTGTTGTGTTG+TGG | + | chr3_3:65733140-65733159 | None:intergenic | 40.0% | |
TTGTGATCAAGCAGTGTAGT+TGG | + | chr3_3:65733314-65733333 | None:intergenic | 40.0% | |
!! | TCTGAGCTTGGCTTTTGAAT+GGG | - | chr3_3:65733335-65733354 | Msa0465400:three_prime_UTR | 40.0% |
TTCTCTTCACGTCTGCAATA+TGG | - | chr3_3:65733364-65733383 | Msa0465400:three_prime_UTR | 40.0% | |
TGGAATCATCTGCAGATCAT+TGG | - | chr3_3:65733384-65733403 | Msa0465400:three_prime_UTR | 40.0% | |
AATTCACGATGAGTCAGGAA+TGG | - | chr3_3:65733881-65733900 | Msa0465400:CDS | 40.0% | |
GATTCATCTTCACCAATGTC+TGG | - | chr3_3:65733903-65733922 | Msa0465400:CDS | 40.0% | |
GTGACATGCTAACATGTTCA+AGG | - | chr3_3:65733925-65733944 | Msa0465400:CDS | 40.0% | |
!! | CATTTTAGGGATAGGTCATG+TGG | + | chr3_3:65733984-65734003 | None:intergenic | 40.0% |
ACCTATCCCTAAAATGTCCA+AGG | - | chr3_3:65733988-65734007 | Msa0465400:CDS | 40.0% | |
!! | ACCTTGGACATTTTAGGGAT+AGG | + | chr3_3:65733992-65734011 | None:intergenic | 40.0% |
ACTTCTGCAAGACTTGTAGA+AGG | - | chr3_3:65734072-65734091 | Msa0465400:CDS | 40.0% | |
! | GCAAGACTTGTAGAAGGTAT+TGG | - | chr3_3:65734078-65734097 | Msa0465400:CDS | 40.0% |
!! | TGTAGAAGGTATTGGACCAA+AGG | - | chr3_3:65734086-65734105 | Msa0465400:CDS | 40.0% |
!! | TTAGGGTTTTGATGGTAGGA+AGG | + | chr3_3:65734230-65734249 | None:intergenic | 40.0% |
! | TTTGGAGCTAATGGAGCATT+AGG | - | chr3_3:65734302-65734321 | Msa0465400:CDS | 40.0% |
TCATGAAGTCAATAGGCCTA+GGG | + | chr3_3:65734379-65734398 | None:intergenic | 40.0% | |
ATCATGAAGTCAATAGGCCT+AGG | + | chr3_3:65734380-65734399 | None:intergenic | 40.0% | |
!! | TAGGCCTATTGACTTCATGA+TGG | - | chr3_3:65734379-65734398 | Msa0465400:CDS | 40.0% |
!! | ATGAATATGGGTGTTGGGAT+TGG | - | chr3_3:65734479-65734498 | Msa0465400:CDS | 40.0% |
GATGGAGGAAACAATAGCAA+TGG | - | chr3_3:65734572-65734591 | Msa0465400:intron | 40.0% | |
TTTGGATATGGATCATGGAG+TGG | - | chr3_3:65734752-65734771 | Msa0465400:intron | 40.0% | |
TCATGGAGTGGTATGATGAA+TGG | - | chr3_3:65734764-65734783 | Msa0465400:intron | 40.0% | |
!! | GTTGATCAAAGGGTTTGTTG+TGG | + | chr3_3:65734801-65734820 | None:intergenic | 40.0% |
ATCCAAAAGGAAACACACCA+AGG | + | chr3_3:65735064-65735083 | None:intergenic | 40.0% | |
TTGTGTTGTGGTTGCTACAT+GGG | + | chr3_3:65733128-65733147 | None:intergenic | 40.0% | |
CATGTGTTTGTGTTGTGTTG+TGG | + | chr3_3:65733140-65733159 | None:intergenic | 40.0% | |
TTGTGATCAAGCAGTGTAGT+TGG | + | chr3_3:65733314-65733333 | None:intergenic | 40.0% | |
!! | TCTGAGCTTGGCTTTTGAAT+GGG | - | chr3_3:65733335-65733354 | Msa0465400:three_prime_UTR | 40.0% |
TTCTCTTCACGTCTGCAATA+TGG | - | chr3_3:65733364-65733383 | Msa0465400:three_prime_UTR | 40.0% | |
TGGAATCATCTGCAGATCAT+TGG | - | chr3_3:65733384-65733403 | Msa0465400:three_prime_UTR | 40.0% | |
AATTCACGATGAGTCAGGAA+TGG | - | chr3_3:65733881-65733900 | Msa0465400:CDS | 40.0% | |
GATTCATCTTCACCAATGTC+TGG | - | chr3_3:65733903-65733922 | Msa0465400:CDS | 40.0% | |
GTGACATGCTAACATGTTCA+AGG | - | chr3_3:65733925-65733944 | Msa0465400:CDS | 40.0% | |
!! | CATTTTAGGGATAGGTCATG+TGG | + | chr3_3:65733984-65734003 | None:intergenic | 40.0% |
ACCTATCCCTAAAATGTCCA+AGG | - | chr3_3:65733988-65734007 | Msa0465400:CDS | 40.0% | |
!! | ACCTTGGACATTTTAGGGAT+AGG | + | chr3_3:65733992-65734011 | None:intergenic | 40.0% |
ACTTCTGCAAGACTTGTAGA+AGG | - | chr3_3:65734072-65734091 | Msa0465400:CDS | 40.0% | |
! | GCAAGACTTGTAGAAGGTAT+TGG | - | chr3_3:65734078-65734097 | Msa0465400:CDS | 40.0% |
!! | TGTAGAAGGTATTGGACCAA+AGG | - | chr3_3:65734086-65734105 | Msa0465400:CDS | 40.0% |
!! | TTAGGGTTTTGATGGTAGGA+AGG | + | chr3_3:65734230-65734249 | None:intergenic | 40.0% |
! | TTTGGAGCTAATGGAGCATT+AGG | - | chr3_3:65734302-65734321 | Msa0465400:CDS | 40.0% |
TCATGAAGTCAATAGGCCTA+GGG | + | chr3_3:65734379-65734398 | None:intergenic | 40.0% | |
ATCATGAAGTCAATAGGCCT+AGG | + | chr3_3:65734380-65734399 | None:intergenic | 40.0% | |
!! | TAGGCCTATTGACTTCATGA+TGG | - | chr3_3:65734379-65734398 | Msa0465400:CDS | 40.0% |
!! | ATGAATATGGGTGTTGGGAT+TGG | - | chr3_3:65734479-65734498 | Msa0465400:CDS | 40.0% |
GATGGAGGAAACAATAGCAA+TGG | - | chr3_3:65734572-65734591 | Msa0465400:intron | 40.0% | |
TTTGGATATGGATCATGGAG+TGG | - | chr3_3:65734752-65734771 | Msa0465400:intron | 40.0% | |
TCATGGAGTGGTATGATGAA+TGG | - | chr3_3:65734764-65734783 | Msa0465400:intron | 40.0% | |
!! | GTTGATCAAAGGGTTTGTTG+TGG | + | chr3_3:65734801-65734820 | None:intergenic | 40.0% |
ATCCAAAAGGAAACACACCA+AGG | + | chr3_3:65735064-65735083 | None:intergenic | 40.0% | |
GTTGTGTTGTGGTTGCTACA+TGG | + | chr3_3:65733129-65733148 | None:intergenic | 45.0% | |
CTTGATCACAACTCTGAGCT+TGG | - | chr3_3:65733323-65733342 | Msa0465400:three_prime_UTR | 45.0% | |
!! | CTCTGAGCTTGGCTTTTGAA+TGG | - | chr3_3:65733334-65733353 | Msa0465400:three_prime_UTR | 45.0% |
! | ATCTGCAGATCATTGGTTGC+AGG | - | chr3_3:65733391-65733410 | Msa0465400:three_prime_UTR | 45.0% |
GTTAGCATGTCACCAGACAT+TGG | + | chr3_3:65733918-65733937 | None:intergenic | 45.0% | |
CTCCTCTCTATCATGGATGA+TGG | + | chr3_3:65733951-65733970 | None:intergenic | 45.0% | |
CATCATCCATGATAGAGAGG+AGG | - | chr3_3:65733949-65733968 | Msa0465400:CDS | 45.0% | |
TCTTAGCCTCCTCTCTATCA+TGG | + | chr3_3:65733958-65733977 | None:intergenic | 45.0% | |
TTTAGGGATAGGTCATGTGG+TGG | + | chr3_3:65733981-65734000 | None:intergenic | 45.0% | |
! | GTGTGAGTTGAATCACACCT+TGG | + | chr3_3:65734008-65734027 | None:intergenic | 45.0% |
!! | CAAGTCTTGCAGAAGTACCT+TGG | + | chr3_3:65734068-65734087 | None:intergenic | 45.0% |
!! | AGAAGGTATTGGACCAAAGG+AGG | - | chr3_3:65734089-65734108 | Msa0465400:CDS | 45.0% |
GTTCCTAAGTGTTCCTCCTT+TGG | + | chr3_3:65734105-65734124 | None:intergenic | 45.0% | |
ACACTTAGGAACATCCCTGT+TGG | - | chr3_3:65734113-65734132 | Msa0465400:CDS | 45.0% | |
! | AGGAAGGTACATGATGTGGT+TGG | + | chr3_3:65734214-65734233 | None:intergenic | 45.0% |
! | TGGTAGGAAGGTACATGATG+TGG | + | chr3_3:65734218-65734237 | None:intergenic | 45.0% |
GGTGAGAGAATTGCACATCA+GGG | + | chr3_3:65734271-65734290 | None:intergenic | 45.0% | |
AGGTGAGAGAATTGCACATC+AGG | + | chr3_3:65734272-65734291 | None:intergenic | 45.0% | |
TTGGCATGCTTGAAAACCCT+AGG | - | chr3_3:65734360-65734379 | Msa0465400:CDS | 45.0% | |
!! | AATATGGGTGTTGGGATTGG+AGG | - | chr3_3:65734482-65734501 | Msa0465400:CDS | 45.0% |
! | GGTGGAATGTCATTTGATGG+AGG | - | chr3_3:65734557-65734576 | Msa0465400:intron | 45.0% |
CTTGAATGGCAGCAAGATCA+AGG | - | chr3_3:65734701-65734720 | Msa0465400:intron | 45.0% | |
GCTGGAAAAGGTCAGTCATT+TGG | - | chr3_3:65734734-65734753 | Msa0465400:intron | 45.0% | |
GAGCTTAGCCGTTGATCAAA+GGG | + | chr3_3:65734811-65734830 | None:intergenic | 45.0% | |
AGAGCTTAGCCGTTGATCAA+AGG | + | chr3_3:65734812-65734831 | None:intergenic | 45.0% | |
AGAGTCCAAATCTACTGCCT+TGG | - | chr3_3:65735044-65735063 | Msa0465400:five_prime_UTR | 45.0% | |
ACACACCAAGGCAGTAGATT+TGG | + | chr3_3:65735052-65735071 | None:intergenic | 45.0% | |
!! | TGCCTTGGTGTGTTTCCTTT+TGG | - | chr3_3:65735059-65735078 | Msa0465400:five_prime_UTR | 45.0% |
GTTGTGTTGTGGTTGCTACA+TGG | + | chr3_3:65733129-65733148 | None:intergenic | 45.0% | |
CTTGATCACAACTCTGAGCT+TGG | - | chr3_3:65733323-65733342 | Msa0465400:three_prime_UTR | 45.0% | |
!! | CTCTGAGCTTGGCTTTTGAA+TGG | - | chr3_3:65733334-65733353 | Msa0465400:three_prime_UTR | 45.0% |
! | ATCTGCAGATCATTGGTTGC+AGG | - | chr3_3:65733391-65733410 | Msa0465400:three_prime_UTR | 45.0% |
GTTAGCATGTCACCAGACAT+TGG | + | chr3_3:65733918-65733937 | None:intergenic | 45.0% | |
CTCCTCTCTATCATGGATGA+TGG | + | chr3_3:65733951-65733970 | None:intergenic | 45.0% | |
CATCATCCATGATAGAGAGG+AGG | - | chr3_3:65733949-65733968 | Msa0465400:CDS | 45.0% | |
TCTTAGCCTCCTCTCTATCA+TGG | + | chr3_3:65733958-65733977 | None:intergenic | 45.0% | |
TTTAGGGATAGGTCATGTGG+TGG | + | chr3_3:65733981-65734000 | None:intergenic | 45.0% | |
! | GTGTGAGTTGAATCACACCT+TGG | + | chr3_3:65734008-65734027 | None:intergenic | 45.0% |
!! | CAAGTCTTGCAGAAGTACCT+TGG | + | chr3_3:65734068-65734087 | None:intergenic | 45.0% |
!! | AGAAGGTATTGGACCAAAGG+AGG | - | chr3_3:65734089-65734108 | Msa0465400:CDS | 45.0% |
GTTCCTAAGTGTTCCTCCTT+TGG | + | chr3_3:65734105-65734124 | None:intergenic | 45.0% | |
ACACTTAGGAACATCCCTGT+TGG | - | chr3_3:65734113-65734132 | Msa0465400:CDS | 45.0% | |
! | AGGAAGGTACATGATGTGGT+TGG | + | chr3_3:65734214-65734233 | None:intergenic | 45.0% |
! | TGGTAGGAAGGTACATGATG+TGG | + | chr3_3:65734218-65734237 | None:intergenic | 45.0% |
GGTGAGAGAATTGCACATCA+GGG | + | chr3_3:65734271-65734290 | None:intergenic | 45.0% | |
AGGTGAGAGAATTGCACATC+AGG | + | chr3_3:65734272-65734291 | None:intergenic | 45.0% | |
TTGGCATGCTTGAAAACCCT+AGG | - | chr3_3:65734360-65734379 | Msa0465400:CDS | 45.0% | |
!! | AATATGGGTGTTGGGATTGG+AGG | - | chr3_3:65734482-65734501 | Msa0465400:CDS | 45.0% |
! | GGTGGAATGTCATTTGATGG+AGG | - | chr3_3:65734557-65734576 | Msa0465400:intron | 45.0% |
CTTGAATGGCAGCAAGATCA+AGG | - | chr3_3:65734701-65734720 | Msa0465400:intron | 45.0% | |
GCTGGAAAAGGTCAGTCATT+TGG | - | chr3_3:65734734-65734753 | Msa0465400:intron | 45.0% | |
GAGCTTAGCCGTTGATCAAA+GGG | + | chr3_3:65734811-65734830 | None:intergenic | 45.0% | |
AGAGCTTAGCCGTTGATCAA+AGG | + | chr3_3:65734812-65734831 | None:intergenic | 45.0% | |
AGAGTCCAAATCTACTGCCT+TGG | - | chr3_3:65735044-65735063 | Msa0465400:five_prime_UTR | 45.0% | |
ACACACCAAGGCAGTAGATT+TGG | + | chr3_3:65735052-65735071 | None:intergenic | 45.0% | |
!! | TGCCTTGGTGTGTTTCCTTT+TGG | - | chr3_3:65735059-65735078 | Msa0465400:five_prime_UTR | 45.0% |
!! | ATAAAAAAAAAAAAAATACA+TGG | + | chr3_3:65734937-65734956 | None:intergenic | 5.0% |
!! | ATAAAAAAAAAAAAAATACA+TGG | + | chr3_3:65734937-65734956 | None:intergenic | 5.0% |
TTGTGGTTGCTACATGGGAC+GGG | + | chr3_3:65733123-65733142 | None:intergenic | 50.0% | |
GTTGTGGTTGCTACATGGGA+CGG | + | chr3_3:65733124-65733143 | None:intergenic | 50.0% | |
GGCACAATTCACGATGAGTC+AGG | - | chr3_3:65733876-65733895 | Msa0465400:CDS | 50.0% | |
GGCCATCATCCATGATAGAG+AGG | - | chr3_3:65733946-65733965 | Msa0465400:CDS | 50.0% | |
ACTACAGTCTCTCTCAGCCA+AGG | - | chr3_3:65734048-65734067 | Msa0465400:CDS | 50.0% | |
GGACCAAAGGAGGAACACTT+AGG | - | chr3_3:65734099-65734118 | Msa0465400:CDS | 50.0% | |
CTTAGGAACATCCCTGTTGG+TGG | - | chr3_3:65734116-65734135 | Msa0465400:CDS | 50.0% | |
TTCTACAGCCTCCACCAACA+GGG | + | chr3_3:65734130-65734149 | None:intergenic | 50.0% | |
TTTCTACAGCCTCCACCAAC+AGG | + | chr3_3:65734131-65734150 | None:intergenic | 50.0% | |
GATCAAGGTTGCTCTGATGC+TGG | - | chr3_3:65734716-65734735 | Msa0465400:intron | 50.0% | |
GGTTGCTCTGATGCTGGAAA+AGG | - | chr3_3:65734722-65734741 | Msa0465400:intron | 50.0% | |
TTCACACTCGACCCATCTCT+TGG | + | chr3_3:65735013-65735032 | None:intergenic | 50.0% | |
TCTTTGTGTGCGACACGTCA+TGG | - | chr3_3:65735102-65735121 | Msa0465400:five_prime_UTR | 50.0% | |
CGACACGTCATGGAAGCTTT+AGG | - | chr3_3:65735112-65735131 | Msa0465400:five_prime_UTR | 50.0% | |
TTGTGGTTGCTACATGGGAC+GGG | + | chr3_3:65733123-65733142 | None:intergenic | 50.0% | |
GTTGTGGTTGCTACATGGGA+CGG | + | chr3_3:65733124-65733143 | None:intergenic | 50.0% | |
GGCACAATTCACGATGAGTC+AGG | - | chr3_3:65733876-65733895 | Msa0465400:CDS | 50.0% | |
GGCCATCATCCATGATAGAG+AGG | - | chr3_3:65733946-65733965 | Msa0465400:CDS | 50.0% | |
ACTACAGTCTCTCTCAGCCA+AGG | - | chr3_3:65734048-65734067 | Msa0465400:CDS | 50.0% | |
GGACCAAAGGAGGAACACTT+AGG | - | chr3_3:65734099-65734118 | Msa0465400:CDS | 50.0% | |
CTTAGGAACATCCCTGTTGG+TGG | - | chr3_3:65734116-65734135 | Msa0465400:CDS | 50.0% | |
TTCTACAGCCTCCACCAACA+GGG | + | chr3_3:65734130-65734149 | None:intergenic | 50.0% | |
TTTCTACAGCCTCCACCAAC+AGG | + | chr3_3:65734131-65734150 | None:intergenic | 50.0% | |
GATCAAGGTTGCTCTGATGC+TGG | - | chr3_3:65734716-65734735 | Msa0465400:intron | 50.0% | |
GGTTGCTCTGATGCTGGAAA+AGG | - | chr3_3:65734722-65734741 | Msa0465400:intron | 50.0% | |
TTCACACTCGACCCATCTCT+TGG | + | chr3_3:65735013-65735032 | None:intergenic | 50.0% | |
TCTTTGTGTGCGACACGTCA+TGG | - | chr3_3:65735102-65735121 | Msa0465400:five_prime_UTR | 50.0% | |
CGACACGTCATGGAAGCTTT+AGG | - | chr3_3:65735112-65735131 | Msa0465400:five_prime_UTR | 50.0% | |
! | AGGAACATCCCTGTTGGTGG+AGG | - | chr3_3:65734119-65734138 | Msa0465400:CDS | 55.0% |
! | AGGAACATCCCTGTTGGTGG+AGG | - | chr3_3:65734119-65734138 | Msa0465400:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 65733115 | 65735277 | 65733115 | ID=Msa0465400;Name=Msa0465400 |
chr3_3 | mRNA | 65733115 | 65735277 | 65733115 | ID=Msa0465400-mRNA-1;Parent=Msa0465400;Name=Msa0465400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=238|1|1|1|1|1|2|451|336 |
chr3_3 | exon | 65733115 | 65734516 | 65733115 | ID=Msa0465400-mRNA-1:exon:14654;Parent=Msa0465400-mRNA-1 |
chr3_3 | exon | 65734980 | 65735277 | 65734980 | ID=Msa0465400-mRNA-1:exon:14653;Parent=Msa0465400-mRNA-1 |
chr3_3 | five_prime_UTR | 65735040 | 65735277 | 65735040 | ID=Msa0465400-mRNA-1:five_prime_utr;Parent=Msa0465400-mRNA-1 |
chr3_3 | CDS | 65734980 | 65735039 | 65734980 | ID=Msa0465400-mRNA-1:cds;Parent=Msa0465400-mRNA-1 |
chr3_3 | CDS | 65733566 | 65734516 | 65733566 | ID=Msa0465400-mRNA-1:cds;Parent=Msa0465400-mRNA-1 |
chr3_3 | three_prime_UTR | 65733115 | 65733565 | 65733115 | ID=Msa0465400-mRNA-1:three_prime_utr;Parent=Msa0465400-mRNA-1 |
Gene Sequence |
Protein sequence |