Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376890 | XP_019433617.1 | 100.000 | 117 | 0 | 0 | 1 | 117 | 17 | 133 | 3.16e-80 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376890 | sp|P49636|RL40_NICSY | 98.291 | 117 | 2 | 0 | 1 | 117 | 12 | 128 | 8.72e-82 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376890 | A0A022R0F0 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 2.14e-80 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0100420 | Msa0376890 | 0.813798 | 2.132687e-51 | -8.615850e-47 |
| Msa0210360 | Msa0376890 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0376890 | Msa0584030 | 0.817093 | 3.943195e-52 | -8.615850e-47 |
| Msa0376890 | Msa0786650 | 0.827685 | 1.365195e-54 | -8.615850e-47 |
| Msa0376890 | Msa0788380 | 0.846748 | 1.787297e-59 | -8.615850e-47 |
| Msa0376890 | Msa1037290 | 0.840259 | 9.682455e-58 | -8.615850e-47 |
| Msa0376890 | Msa1041680 | 0.853997 | 1.649696e-61 | -8.615850e-47 |
| Msa0376890 | Msa1164150 | 0.815317 | 9.835437e-52 | -8.615850e-47 |
| Msa0376890 | Msa1166570 | 0.855122 | 7.795766e-62 | -8.615850e-47 |
| Msa0376890 | Msa1368920 | 0.840535 | 8.201113e-58 | -8.615850e-47 |
| Msa0376890 | Msa1374240 | 0.838135 | 3.442930e-57 | -8.615850e-47 |
| Msa0376890 | Msa1392590 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0376890 | Msa1403910 | 0.803143 | 4.012250e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376890 | MtrunA17_Chr7g0266661 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 4.13e-84 | 241 |
| Msa0376890 | MtrunA17_Chr1g0178381 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 4.13e-84 | 241 |
| Msa0376890 | MtrunA17_Chr3g0127481 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 4.13e-84 | 241 |
| Msa0376890 | MtrunA17_Chr6g0475951 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.19e-42 | 134 |
| Msa0376890 | MtrunA17_Chr6g0475961 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 1.35e-41 | 135 |
| Msa0376890 | MtrunA17_Chr6g0475961 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.35e-41 | 135 |
| Msa0376890 | MtrunA17_Chr4g0037241 | 97.015 | 67 | 2 | 0 | 1 | 67 | 12 | 78 | 1.62e-41 | 134 |
| Msa0376890 | MtrunA17_Chr4g0037241 | 59.375 | 64 | 26 | 0 | 2 | 65 | 89 | 152 | 8.14e-22 | 84.3 |
| Msa0376890 | MtrunA17_Chr5g0444101 | 97.015 | 67 | 2 | 0 | 1 | 67 | 12 | 78 | 1.62e-41 | 134 |
| Msa0376890 | MtrunA17_Chr5g0444101 | 59.375 | 64 | 26 | 0 | 2 | 65 | 89 | 152 | 8.14e-22 | 84.3 |
| Msa0376890 | MtrunA17_Chr8g0380181 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.09e-41 | 134 |
| Msa0376890 | MtrunA17_Chr5g0413361 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.28e-41 | 134 |
| Msa0376890 | MtrunA17_Chr7g0274921 | 98.485 | 66 | 1 | 0 | 1 | 66 | 14 | 79 | 5.13e-41 | 135 |
| Msa0376890 | MtrunA17_Chr7g0274921 | 98.485 | 66 | 1 | 0 | 1 | 66 | 90 | 155 | 5.13e-41 | 135 |
| Msa0376890 | MtrunA17_Chr7g0274921 | 98.485 | 66 | 1 | 0 | 1 | 66 | 166 | 231 | 6.80e-41 | 135 |
| Msa0376890 | MtrunA17_Chr1g0181441 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.66e-41 | 135 |
| Msa0376890 | MtrunA17_Chr1g0181441 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.66e-41 | 135 |
| Msa0376890 | MtrunA17_Chr1g0181441 | 100.000 | 65 | 0 | 0 | 1 | 65 | 164 | 228 | 1.21e-40 | 134 |
| Msa0376890 | MtrunA17_Chr4g0041751 | 96.970 | 66 | 2 | 0 | 1 | 66 | 88 | 153 | 1.41e-40 | 134 |
| Msa0376890 | MtrunA17_Chr4g0041751 | 96.970 | 66 | 2 | 0 | 1 | 66 | 12 | 77 | 2.67e-40 | 133 |
| Msa0376890 | MtrunA17_Chr4g0041751 | 66.154 | 65 | 22 | 0 | 1 | 65 | 164 | 228 | 8.29e-23 | 88.6 |
| Msa0376890 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 20 | 85 | 2.00e-39 | 135 |
| Msa0376890 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 96 | 161 | 2.00e-39 | 135 |
| Msa0376890 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 172 | 237 | 2.00e-39 | 135 |
| Msa0376890 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 248 | 313 | 2.00e-39 | 135 |
| Msa0376890 | MtrunA17_Chr8g0377821 | 100.000 | 65 | 0 | 0 | 1 | 65 | 324 | 388 | 3.12e-39 | 134 |
| Msa0376890 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 4.92e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 4.92e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 4.92e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 4.92e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 319 | 384 | 4.92e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 395 | 460 | 6.52e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 16 | 81 | 5.53e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 92 | 157 | 5.53e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 168 | 233 | 5.53e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 244 | 309 | 5.53e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 320 | 385 | 5.53e-39 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 396 | 461 | 7.25e-39 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 1.21e-38 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.21e-38 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 1.21e-38 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 1.21e-38 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 319 | 384 | 1.21e-38 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 395 | 460 | 1.21e-38 | 135 |
| Msa0376890 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 471 | 536 | 1.58e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.26e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 1.26e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 1.26e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 1.26e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 1.26e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 392 | 457 | 1.26e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0041701 | 100.000 | 65 | 0 | 0 | 1 | 65 | 468 | 532 | 1.92e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 1.31e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.31e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 1.31e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 1.31e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 395 | 460 | 1.31e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 471 | 536 | 1.72e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0048591 | 95.455 | 66 | 3 | 0 | 1 | 66 | 319 | 384 | 4.56e-37 | 131 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.93e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 1.93e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 1.93e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 379 | 444 | 1.93e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 455 | 520 | 1.93e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 531 | 596 | 2.48e-38 | 135 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 96.970 | 66 | 2 | 0 | 1 | 66 | 15 | 80 | 5.09e-37 | 131 |
| Msa0376890 | MtrunA17_Chr4g0046831 | 74.242 | 66 | 1 | 1 | 1 | 66 | 319 | 368 | 5.14e-23 | 92.4 |
| Msa0376890 | MtrunA17_Chr8g0374171 | 96.774 | 62 | 2 | 0 | 5 | 66 | 89 | 150 | 1.70e-36 | 122 |
| Msa0376890 | MtrunA17_Chr8g0374171 | 91.429 | 35 | 3 | 0 | 32 | 66 | 40 | 74 | 2.11e-15 | 68.2 |
| Msa0376890 | MtrunA17_Chr1g0169371 | 72.308 | 65 | 18 | 0 | 1 | 65 | 226 | 290 | 1.10e-22 | 89.7 |
| Msa0376890 | MtrunA17_Chr5g0433721 | 67.692 | 65 | 20 | 1 | 2 | 65 | 206 | 270 | 4.46e-21 | 85.1 |
| Msa0376890 | MtrunA17_Chr1g0169401 | 64.516 | 62 | 22 | 0 | 4 | 65 | 10 | 71 | 6.99e-21 | 79.3 |
| Msa0376890 | MtrunA17_Chr5g0424981 | 60.938 | 64 | 25 | 0 | 1 | 64 | 13 | 76 | 2.26e-20 | 78.6 |
| Msa0376890 | MtrunA17_Chr5g0433681 | 63.934 | 61 | 22 | 0 | 4 | 64 | 16 | 76 | 2.48e-20 | 78.2 |
| Msa0376890 | MtrunA17_Chr5g0428191 | 69.231 | 65 | 20 | 0 | 1 | 65 | 252 | 316 | 2.91e-20 | 83.6 |
| Msa0376890 | MtrunA17_Chr5g0433521 | 66.667 | 63 | 21 | 0 | 2 | 64 | 252 | 314 | 3.80e-20 | 83.2 |
| Msa0376890 | MtrunA17_Chr5g0433411 | 69.492 | 59 | 18 | 0 | 4 | 62 | 281 | 339 | 1.88e-19 | 81.6 |
| Msa0376890 | MtrunA17_Chr5g0433631 | 66.129 | 62 | 21 | 0 | 1 | 62 | 277 | 338 | 3.39e-19 | 80.9 |
| Msa0376890 | MtrunA17_Chr7g0259431 | 60.317 | 63 | 25 | 0 | 2 | 64 | 235 | 297 | 2.07e-18 | 78.2 |
| Msa0376890 | MtrunA17_Chr2g0298951 | 60.938 | 64 | 25 | 0 | 1 | 64 | 247 | 310 | 3.86e-18 | 77.8 |
| Msa0376890 | MtrunA17_Chr4g0003111 | 57.143 | 63 | 27 | 0 | 2 | 64 | 16 | 78 | 1.06e-17 | 71.6 |
| Msa0376890 | MtrunA17_Chr5g0433531 | 63.333 | 60 | 22 | 0 | 4 | 63 | 259 | 318 | 2.21e-17 | 75.9 |
| Msa0376890 | MtrunA17_Chr5g0433661 | 62.500 | 64 | 24 | 0 | 1 | 64 | 289 | 352 | 5.92e-17 | 74.7 |
| Msa0376890 | MtrunA17_Chr8g0374161 | 100.000 | 33 | 0 | 0 | 1 | 33 | 20 | 52 | 8.96e-17 | 68.6 |
| Msa0376890 | MtrunA17_Chr2g0298941 | 58.730 | 63 | 26 | 0 | 2 | 64 | 189 | 251 | 4.52e-16 | 71.2 |
| Msa0376890 | MtrunA17_Chr5g0433711 | 58.333 | 60 | 25 | 0 | 4 | 63 | 4 | 63 | 2.89e-15 | 65.1 |
| Msa0376890 | MtrunA17_Chr5g0433701 | 62.264 | 53 | 20 | 0 | 4 | 56 | 16 | 68 | 7.44e-15 | 64.7 |
| Msa0376890 | MtrunA17_Chr7g0223111 | 58.462 | 65 | 26 | 1 | 1 | 64 | 278 | 342 | 1.87e-13 | 65.1 |
| Msa0376890 | MtrunA17_Chr5g0433391 | 48.438 | 64 | 33 | 0 | 1 | 64 | 20 | 83 | 6.59e-13 | 59.7 |
| Msa0376890 | MtrunA17_Chr5g0433381 | 54.839 | 62 | 27 | 1 | 4 | 64 | 24 | 85 | 1.03e-12 | 58.9 |
| Msa0376890 | MtrunA17_Chr5g0424971 | 50.000 | 64 | 32 | 0 | 1 | 64 | 263 | 326 | 2.26e-12 | 62.0 |
| Msa0376890 | MtrunA17_Chr4g0041621 | 76.471 | 34 | 8 | 0 | 33 | 66 | 11 | 44 | 3.63e-12 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376890 | AT2G36170.1 | 98.291 | 117 | 2 | 0 | 1 | 117 | 12 | 128 | 1.67e-82 | 237 |
| Msa0376890 | AT3G52590.1 | 98.291 | 117 | 2 | 0 | 1 | 117 | 12 | 128 | 1.67e-82 | 237 |
| Msa0376890 | AT4G05320.7 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.09e-41 | 135 |
| Msa0376890 | AT4G05320.7 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 1.40e-41 | 134 |
| Msa0376890 | AT4G05050.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.09e-41 | 135 |
| Msa0376890 | AT4G05050.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 1.40e-41 | 134 |
| Msa0376890 | AT2G35635.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.33e-41 | 134 |
| Msa0376890 | AT2G35635.1 | 57.576 | 66 | 28 | 0 | 2 | 67 | 89 | 154 | 1.20e-21 | 84.3 |
| Msa0376890 | AT2G47110.2 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.41e-41 | 134 |
| Msa0376890 | AT2G47110.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.41e-41 | 134 |
| Msa0376890 | AT3G62250.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.78e-41 | 134 |
| Msa0376890 | AT1G23410.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.91e-41 | 134 |
| Msa0376890 | AT1G31340.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.94e-41 | 134 |
| Msa0376890 | AT1G31340.1 | 60.000 | 65 | 26 | 0 | 2 | 66 | 89 | 153 | 2.34e-22 | 86.3 |
| Msa0376890 | AT4G02890.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0376890 | AT4G02890.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0376890 | AT4G02890.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0376890 | AT4G02890.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0376890 | AT4G02890.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0376890 | AT4G02890.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0376890 | AT4G05050.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0376890 | AT4G05050.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0376890 | AT4G05050.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0376890 | AT4G05050.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0376890 | AT4G05050.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0376890 | AT4G05050.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0376890 | AT4G05050.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0376890 | AT4G05050.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0376890 | AT4G05050.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0376890 | AT1G55060.1 | 96.970 | 66 | 2 | 0 | 1 | 66 | 88 | 153 | 2.62e-40 | 134 |
| Msa0376890 | AT1G55060.1 | 96.923 | 65 | 2 | 0 | 1 | 65 | 164 | 228 | 3.55e-38 | 128 |
| Msa0376890 | AT1G55060.1 | 84.848 | 66 | 10 | 0 | 1 | 66 | 12 | 77 | 1.04e-34 | 119 |
| Msa0376890 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0376890 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0376890 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0376890 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0376890 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0376890 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0376890 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0376890 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0376890 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0376890 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0376890 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0376890 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0376890 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0376890 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0376890 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0376890 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0376890 | AT5G03240.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.3 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0376890 | AT5G03240.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.2 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0376890 | AT5G03240.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0376890 | AT5G03240.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0376890 | AT5G20620.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0376890 | AT5G20620.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0376890 | AT5G20620.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0376890 | AT5G20620.2 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0376890 | AT1G65350.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.43e-40 | 135 |
| Msa0376890 | AT1G65350.1 | 96.970 | 66 | 2 | 0 | 1 | 66 | 163 | 228 | 1.13e-38 | 132 |
| Msa0376890 | AT1G65350.1 | 96.970 | 66 | 1 | 1 | 1 | 66 | 88 | 152 | 7.85e-37 | 127 |
| Msa0376890 | AT1G65350.1 | 77.215 | 79 | 4 | 1 | 1 | 65 | 239 | 317 | 6.96e-31 | 112 |
| Msa0376890 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 2.63e-39 | 135 |
| Msa0376890 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 2.63e-39 | 135 |
| Msa0376890 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.02e-39 | 135 |
| Msa0376890 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 2.63e-39 | 135 |
| Msa0376890 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.12e-39 | 135 |
| Msa0376890 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.12e-39 | 135 |
| Msa0376890 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.12e-39 | 135 |
| Msa0376890 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.12e-39 | 135 |
| Msa0376890 | AT5G20620.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 316 | 380 | 3.27e-39 | 135 |
| Msa0376890 | AT5G37640.1 | 95.455 | 66 | 3 | 0 | 1 | 66 | 90 | 155 | 5.33e-39 | 133 |
| Msa0376890 | AT5G37640.1 | 93.939 | 66 | 4 | 0 | 1 | 66 | 166 | 231 | 1.17e-36 | 127 |
| Msa0376890 | AT5G37640.1 | 92.424 | 66 | 4 | 1 | 1 | 65 | 242 | 307 | 2.02e-33 | 118 |
| Msa0376890 | AT5G37640.1 | 78.788 | 66 | 14 | 0 | 1 | 66 | 14 | 79 | 1.76e-29 | 108 |
| Msa0376890 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 392 | 457 | 8.90e-39 | 135 |
| Msa0376890 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 6.79e-39 | 135 |
| Msa0376890 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 392 | 457 | 8.90e-39 | 135 |
| Msa0376890 | AT3G09790.2 | 92.424 | 66 | 5 | 0 | 1 | 66 | 90 | 155 | 3.22e-33 | 121 |
| Msa0376890 | AT3G09790.2 | 87.879 | 66 | 8 | 0 | 1 | 66 | 14 | 79 | 1.83e-32 | 119 |
| Msa0376890 | AT3G09790.2 | 77.778 | 63 | 14 | 0 | 1 | 63 | 563 | 625 | 2.21e-24 | 96.7 |
| Msa0376890 | AT3G09790.2 | 77.778 | 63 | 14 | 0 | 4 | 66 | 257 | 319 | 7.84e-24 | 95.1 |
| Msa0376890 | AT3G09790.2 | 70.769 | 65 | 19 | 0 | 2 | 66 | 405 | 469 | 1.53e-23 | 94.4 |
| Msa0376890 | AT3G09790.2 | 69.697 | 66 | 20 | 0 | 1 | 66 | 487 | 552 | 2.07e-22 | 91.3 |
| Msa0376890 | AT3G09790.2 | 71.212 | 66 | 17 | 1 | 1 | 64 | 171 | 236 | 2.45e-22 | 90.9 |
| Msa0376890 | AT3G09790.2 | 71.875 | 64 | 16 | 1 | 2 | 63 | 331 | 394 | 1.34e-21 | 89.0 |
| Msa0376890 | AT3G09790.1 | 92.424 | 66 | 5 | 0 | 1 | 66 | 90 | 155 | 3.22e-33 | 121 |
| Msa0376890 | AT3G09790.1 | 87.879 | 66 | 8 | 0 | 1 | 66 | 14 | 79 | 1.83e-32 | 119 |
| Msa0376890 | AT3G09790.1 | 77.778 | 63 | 14 | 0 | 1 | 63 | 563 | 625 | 2.21e-24 | 96.7 |
| Msa0376890 | AT3G09790.1 | 77.778 | 63 | 14 | 0 | 4 | 66 | 257 | 319 | 7.84e-24 | 95.1 |
| Msa0376890 | AT3G09790.1 | 70.769 | 65 | 19 | 0 | 2 | 66 | 405 | 469 | 1.53e-23 | 94.4 |
| Msa0376890 | AT3G09790.1 | 69.697 | 66 | 20 | 0 | 1 | 66 | 487 | 552 | 2.07e-22 | 91.3 |
| Msa0376890 | AT3G09790.1 | 71.212 | 66 | 17 | 1 | 1 | 64 | 171 | 236 | 2.45e-22 | 90.9 |
| Msa0376890 | AT3G09790.1 | 71.875 | 64 | 16 | 1 | 2 | 63 | 331 | 394 | 1.34e-21 | 89.0 |
| Msa0376890 | AT1G53930.1 | 77.049 | 61 | 14 | 0 | 2 | 62 | 98 | 158 | 8.47e-27 | 97.4 |
| Msa0376890 | AT1G11980.1 | 53.125 | 64 | 30 | 0 | 2 | 65 | 13 | 76 | 1.18e-19 | 77.0 |
| Msa0376890 | AT1G53950.1 | 60.000 | 60 | 24 | 0 | 1 | 60 | 80 | 139 | 1.95e-18 | 75.9 |
Find 36 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCAGAAATTAACCTTTC+TGG | 0.099822 | 3_1:-77222129 | None:intergenic |
| TCCATCTTCCAACTGCTTTC+CGG | 0.264402 | 3_1:-77222083 | None:intergenic |
| CTTATCCTGGTTATACTTCC+TGG | 0.288777 | 3_1:-77222352 | None:intergenic |
| GTCTACTTGATCTTCTTCTT+TGG | 0.291217 | 3_1:-77223766 | None:intergenic |
| AAGATCAACCTCTGCTGGTC+CGG | 0.328982 | 3_1:-77222058 | None:intergenic |
| AATCATTGAGCCTTCTTTGA+TGG | 0.363914 | 3_1:+77222323 | Msa0376890:CDS |
| CAACGTCAAAGCTAAGATTC+AGG | 0.397707 | 3_1:+77221922 | Msa0376890:CDS |
| AGATCAACCTCTGCTGGTCC+GGG | 0.424083 | 3_1:-77222057 | None:intergenic |
| AATTCTGTTGGAAGTTGAAC+TGG | 0.449207 | 3_1:+77223868 | Msa0376890:three_prime_UTR |
| CTTCTTTGATGGCGTTGGCC+AGG | 0.452976 | 3_1:+77222334 | Msa0376890:CDS |
| CGGCGAAGATCAACCTCTGC+TGG | 0.466798 | 3_1:-77222063 | None:intergenic |
| CTAAGAAGCTAATTATCAAA+AGG | 0.480970 | 3_1:-77223836 | None:intergenic |
| TGAGCCTTCTTTGATGGCGT+TGG | 0.490761 | 3_1:+77222329 | Msa0376890:CDS |
| CTGGCCAACGCCATCAAAGA+AGG | 0.492085 | 3_1:-77222333 | None:intergenic |
| TGCGGCAGATAGTCTTATCC+TGG | 0.502333 | 3_1:-77222365 | None:intergenic |
| GCCGGAAAGCAGTTGGAAGA+TGG | 0.509801 | 3_1:+77222082 | Msa0376890:CDS |
| TTCCTGCAGTTGACAGCACG+AGG | 0.524526 | 3_1:-77223619 | None:intergenic |
| TAGTATTGTATGAATTCTGT+TGG | 0.524734 | 3_1:+77223856 | Msa0376890:three_prime_UTR |
| TGTCGCTTGACTCCACCTCA+AGG | 0.525834 | 3_1:-77221892 | None:intergenic |
| CTTAGCTTTGACGTTGTCGA+TGG | 0.527118 | 3_1:-77221915 | None:intergenic |
| GCTAAGATTCAGGATAAAGA+AGG | 0.540669 | 3_1:+77221932 | Msa0376890:CDS |
| CAGCAGAGGTTGATCTTCGC+CGG | 0.541092 | 3_1:+77222064 | Msa0376890:CDS |
| ACCCTCGTGCTGTCAACTGC+AGG | 0.545009 | 3_1:+77223617 | Msa0376890:CDS |
| GATCTTCGCCGGAAAGCAGT+TGG | 0.546373 | 3_1:+77222075 | Msa0376890:CDS |
| CTGGATGTTGTAGTCAGCAA+GGG | 0.569635 | 3_1:-77222110 | None:intergenic |
| ATCAACCTCTGCTGGTCCGG+GGG | 0.575505 | 3_1:-77222055 | None:intergenic |
| GTCGCTTGACTCCACCTCAA+GGG | 0.576002 | 3_1:-77221891 | None:intergenic |
| TCTGGATGTTGTAGTCAGCA+AGG | 0.585018 | 3_1:-77222111 | None:intergenic |
| GTTGGCCAGGAAGTATAACC+AGG | 0.589917 | 3_1:+77222347 | Msa0376890:CDS |
| GATCAACCTCTGCTGGTCCG+GGG | 0.600001 | 3_1:-77222056 | None:intergenic |
| CAAGACTATCACCCTTGAGG+TGG | 0.603784 | 3_1:+77221880 | None:intergenic |
| CAATTGTTTAGGAATTCCCC+CGG | 0.609118 | 3_1:+77222039 | Msa0376890:intron |
| GCTGACTACAACATCCAGAA+AGG | 0.625044 | 3_1:+77222115 | Msa0376890:CDS |
| GAAGTGCGGACACAGCAACC+AGG | 0.663806 | 3_1:+77223645 | Msa0376890:CDS |
| CGGCAAGACTATCACCCTTG+AGG | 0.665715 | 3_1:+77221877 | None:intergenic |
| TCCTGCAGTTGACAGCACGA+GGG | 0.675676 | 3_1:-77223618 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAGAATTTACTTTATT+TGG | - | chr3_1:77222749-77222768 | None:intergenic | 10.0% |
| !! | ATAAAGTAAATTCTATTTAT+AGG | + | chr3_1:77222750-77222769 | Msa0376890:intron | 10.0% |
| !! | TAAAGTAAATTCTATTTATA+GGG | + | chr3_1:77222751-77222770 | Msa0376890:intron | 10.0% |
| !!! | TTATTATTATTTAGTCTTAA+TGG | + | chr3_1:77223716-77223735 | Msa0376890:intron | 10.0% |
| !! | TAAATAGAATTTACTTTATT+TGG | - | chr3_1:77222749-77222768 | None:intergenic | 10.0% |
| !! | ATAAAGTAAATTCTATTTAT+AGG | + | chr3_1:77222750-77222769 | Msa0376890:intron | 10.0% |
| !! | TAAAGTAAATTCTATTTATA+GGG | + | chr3_1:77222751-77222770 | Msa0376890:intron | 10.0% |
| !!! | TTATTATTATTTAGTCTTAA+TGG | + | chr3_1:77223716-77223735 | Msa0376890:intron | 10.0% |
| !! | AAAGTAAATTCTATTTATAG+GGG | + | chr3_1:77222752-77222771 | Msa0376890:intron | 15.0% |
| !!! | AGTAAAATAATCTCTTTTTA+TGG | - | chr3_1:77223224-77223243 | None:intergenic | 15.0% |
| !!! | ATAAAAAGAGATTATTTTAC+TGG | + | chr3_1:77223223-77223242 | Msa0376890:intron | 15.0% |
| !! | AAAGTAAATTCTATTTATAG+GGG | + | chr3_1:77222752-77222771 | Msa0376890:intron | 15.0% |
| !!! | AGTAAAATAATCTCTTTTTA+TGG | - | chr3_1:77223224-77223243 | None:intergenic | 15.0% |
| !!! | ATAAAAAGAGATTATTTTAC+TGG | + | chr3_1:77223223-77223242 | Msa0376890:intron | 15.0% |
| !! | AAAGGAAAAAGAGAAAAAAA+TGG | - | chr3_1:77221983-77222002 | None:intergenic | 20.0% |
| !! | AATCATCTGAATGTTTAAAA+AGG | + | chr3_1:77222659-77222678 | Msa0376890:intron | 20.0% |
| !!! | TTAAAAAGGTTACTTTTCTT+TGG | + | chr3_1:77222673-77222692 | Msa0376890:intron | 20.0% |
| !! | AAGTAAATTCTATTTATAGG+GGG | + | chr3_1:77222753-77222772 | Msa0376890:intron | 20.0% |
| !! | ATCCCATATATTAACTATTT+GGG | - | chr3_1:77222794-77222813 | None:intergenic | 20.0% |
| !! | TATCCCATATATTAACTATT+TGG | - | chr3_1:77222795-77222814 | None:intergenic | 20.0% |
| !! | AAATAGTTAATATATGGGAT+AGG | + | chr3_1:77222794-77222813 | Msa0376890:intron | 20.0% |
| !!! | TATAAAAGGTATTGTTATCA+CGG | - | chr3_1:77222896-77222915 | None:intergenic | 20.0% |
| !!! | CCAAGGTATTTAAATATAAA+AGG | - | chr3_1:77222910-77222929 | None:intergenic | 20.0% |
| !!! | CCTTTTATATTTAAATACCT+TGG | + | chr3_1:77222907-77222926 | Msa0376890:intron | 20.0% |
| !! | AAAATAATAGTAATTGCCTA+GGG | + | chr3_1:77223388-77223407 | Msa0376890:intron | 20.0% |
| !! | CAGAATAATACAATATAACT+AGG | - | chr3_1:77223473-77223492 | None:intergenic | 20.0% |
| !!! | TTTTGTTGATGATTTTGTTT+TGG | + | chr3_1:77223894-77223913 | Msa0376890:three_prime_UTR | 20.0% |
| !!! | CAATAATTTTGTTGCTTTTT+TGG | + | chr3_1:77223993-77224012 | Msa0376890:three_prime_UTR | 20.0% |
| !! | AAAGGAAAAAGAGAAAAAAA+TGG | - | chr3_1:77221983-77222002 | None:intergenic | 20.0% |
| !! | AATCATCTGAATGTTTAAAA+AGG | + | chr3_1:77222659-77222678 | Msa0376890:intron | 20.0% |
| !!! | TTAAAAAGGTTACTTTTCTT+TGG | + | chr3_1:77222673-77222692 | Msa0376890:intron | 20.0% |
| !! | AAGTAAATTCTATTTATAGG+GGG | + | chr3_1:77222753-77222772 | Msa0376890:intron | 20.0% |
| !! | ATCCCATATATTAACTATTT+GGG | - | chr3_1:77222794-77222813 | None:intergenic | 20.0% |
| !! | TATCCCATATATTAACTATT+TGG | - | chr3_1:77222795-77222814 | None:intergenic | 20.0% |
| !! | AAATAGTTAATATATGGGAT+AGG | + | chr3_1:77222794-77222813 | Msa0376890:intron | 20.0% |
| !!! | TATAAAAGGTATTGTTATCA+CGG | - | chr3_1:77222896-77222915 | None:intergenic | 20.0% |
| !!! | CCAAGGTATTTAAATATAAA+AGG | - | chr3_1:77222910-77222929 | None:intergenic | 20.0% |
| !!! | CCTTTTATATTTAAATACCT+TGG | + | chr3_1:77222907-77222926 | Msa0376890:intron | 20.0% |
| !! | AAAATAATAGTAATTGCCTA+GGG | + | chr3_1:77223388-77223407 | Msa0376890:intron | 20.0% |
| !! | CAGAATAATACAATATAACT+AGG | - | chr3_1:77223473-77223492 | None:intergenic | 20.0% |
| !!! | TTTTGTTGATGATTTTGTTT+TGG | + | chr3_1:77223894-77223913 | Msa0376890:three_prime_UTR | 20.0% |
| !!! | CAATAATTTTGTTGCTTTTT+TGG | + | chr3_1:77223993-77224012 | Msa0376890:three_prime_UTR | 20.0% |
| ! | AAAAGAGAAAAAAATGGATC+TGG | - | chr3_1:77221977-77221996 | None:intergenic | 25.0% |
| ! | ATCAAACAAAAACGAATCAA+AGG | - | chr3_1:77222001-77222020 | None:intergenic | 25.0% |
| ! | TTTCTCTCTTTCAATTGTTT+AGG | + | chr3_1:77222028-77222047 | Msa0376890:intron | 25.0% |
| ! | AATTCAGAAATTAACCTTTC+TGG | - | chr3_1:77222132-77222151 | None:intergenic | 25.0% |
| ! | AACGTAACTAATAACATTCA+GGG | - | chr3_1:77222215-77222234 | None:intergenic | 25.0% |
| ! | AACACTTTAGACTTTAGTTA+AGG | + | chr3_1:77222551-77222570 | Msa0376890:intron | 25.0% |
| ! | AGACCCAAATAGTTAATATA+TGG | + | chr3_1:77222788-77222807 | Msa0376890:intron | 25.0% |
| ! | GACCCAAATAGTTAATATAT+GGG | + | chr3_1:77222789-77222808 | Msa0376890:intron | 25.0% |
| ! | ACTTCTGATTACATTGAATT+AGG | + | chr3_1:77223069-77223088 | Msa0376890:intron | 25.0% |
| !! | ATTTTGCAAATGAATACCTT+TGG | - | chr3_1:77223373-77223392 | None:intergenic | 25.0% |
| ! | CAAAATAATAGTAATTGCCT+AGG | + | chr3_1:77223387-77223406 | Msa0376890:intron | 25.0% |
| ! | AAATAATAGTAATTGCCTAG+GGG | + | chr3_1:77223389-77223408 | Msa0376890:intron | 25.0% |
| ! | ATAGTATCACATAAGATGTA+GGG | - | chr3_1:77223443-77223462 | None:intergenic | 25.0% |
| ! | TATAGTATCACATAAGATGT+AGG | - | chr3_1:77223444-77223463 | None:intergenic | 25.0% |
| ! | TTATAGTTGCCATCTATTAT+TGG | + | chr3_1:77223514-77223533 | Msa0376890:intron | 25.0% |
| !!! | TATTTTTTGTATTGCAGTTG+AGG | + | chr3_1:77223743-77223762 | Msa0376890:intron | 25.0% |
| ! | CTAAGAAGCTAATTATCAAA+AGG | - | chr3_1:77223839-77223858 | None:intergenic | 25.0% |
| ! | TAGTATTGTATGAATTCTGT+TGG | + | chr3_1:77223856-77223875 | Msa0376890:three_prime_UTR | 25.0% |
| ! | AAAAGAGAAAAAAATGGATC+TGG | - | chr3_1:77221977-77221996 | None:intergenic | 25.0% |
| ! | ATCAAACAAAAACGAATCAA+AGG | - | chr3_1:77222001-77222020 | None:intergenic | 25.0% |
| ! | TTTCTCTCTTTCAATTGTTT+AGG | + | chr3_1:77222028-77222047 | Msa0376890:intron | 25.0% |
| ! | AATTCAGAAATTAACCTTTC+TGG | - | chr3_1:77222132-77222151 | None:intergenic | 25.0% |
| ! | AACGTAACTAATAACATTCA+GGG | - | chr3_1:77222215-77222234 | None:intergenic | 25.0% |
| ! | AACACTTTAGACTTTAGTTA+AGG | + | chr3_1:77222551-77222570 | Msa0376890:intron | 25.0% |
| ! | AGACCCAAATAGTTAATATA+TGG | + | chr3_1:77222788-77222807 | Msa0376890:intron | 25.0% |
| ! | GACCCAAATAGTTAATATAT+GGG | + | chr3_1:77222789-77222808 | Msa0376890:intron | 25.0% |
| ! | ACTTCTGATTACATTGAATT+AGG | + | chr3_1:77223069-77223088 | Msa0376890:intron | 25.0% |
| !! | ATTTTGCAAATGAATACCTT+TGG | - | chr3_1:77223373-77223392 | None:intergenic | 25.0% |
| ! | CAAAATAATAGTAATTGCCT+AGG | + | chr3_1:77223387-77223406 | Msa0376890:intron | 25.0% |
| ! | AAATAATAGTAATTGCCTAG+GGG | + | chr3_1:77223389-77223408 | Msa0376890:intron | 25.0% |
| ! | ATAGTATCACATAAGATGTA+GGG | - | chr3_1:77223443-77223462 | None:intergenic | 25.0% |
| ! | TATAGTATCACATAAGATGT+AGG | - | chr3_1:77223444-77223463 | None:intergenic | 25.0% |
| ! | TTATAGTTGCCATCTATTAT+TGG | + | chr3_1:77223514-77223533 | Msa0376890:intron | 25.0% |
| !!! | TATTTTTTGTATTGCAGTTG+AGG | + | chr3_1:77223743-77223762 | Msa0376890:intron | 25.0% |
| ! | CTAAGAAGCTAATTATCAAA+AGG | - | chr3_1:77223839-77223858 | None:intergenic | 25.0% |
| ! | TAGTATTGTATGAATTCTGT+TGG | + | chr3_1:77223856-77223875 | Msa0376890:three_prime_UTR | 25.0% |
| CAACGTAACTAATAACATTC+AGG | - | chr3_1:77222216-77222235 | None:intergenic | 30.0% | |
| ! | TTGTGTTATTGGTATTGGAT+TGG | + | chr3_1:77222411-77222430 | Msa0376890:intron | 30.0% |
| TTAGACTTTAGTTAAGGTTC+AGG | + | chr3_1:77222557-77222576 | Msa0376890:intron | 30.0% | |
| !!! | TCAGGTTGTACATTTTTTTG+AGG | + | chr3_1:77222575-77222594 | Msa0376890:intron | 30.0% |
| ! | AATGATGGTTTTCTTCAGTT+TGG | + | chr3_1:77222837-77222856 | Msa0376890:intron | 30.0% |
| ! | AGTTCATACATCTGTTGTTT+CGG | - | chr3_1:77222971-77222990 | None:intergenic | 30.0% |
| ! | GTCGACAACAATAAGATTTT+GGG | - | chr3_1:77223102-77223121 | None:intergenic | 30.0% |
| GATTCATACACTATGAAGTA+TGG | - | chr3_1:77223159-77223178 | None:intergenic | 30.0% | |
| ! | ATTAATGTTTGAAACCTGTC+TGG | + | chr3_1:77223253-77223272 | Msa0376890:intron | 30.0% |
| !!! | ACACATGATTTTGAAACCAA+AGG | + | chr3_1:77223354-77223373 | Msa0376890:intron | 30.0% |
| AATAATAGTAATTGCCTAGG+GGG | + | chr3_1:77223390-77223409 | Msa0376890:intron | 30.0% | |
| ACAATTATAAGTAAGCACAC+TGG | - | chr3_1:77223571-77223590 | None:intergenic | 30.0% | |
| CAGATTTCATTCAATATGAC+AGG | - | chr3_1:77223692-77223711 | None:intergenic | 30.0% | |
| !!! | GACTTTTTTGTTGTCATTAC+TGG | + | chr3_1:77223807-77223826 | Msa0376890:three_prime_UTR | 30.0% |
| !!! | CTTTTTTGGTGATATTCTGT+GGG | + | chr3_1:77224007-77224026 | Msa0376890:three_prime_UTR | 30.0% |
| CAACGTAACTAATAACATTC+AGG | - | chr3_1:77222216-77222235 | None:intergenic | 30.0% | |
| ! | TTGTGTTATTGGTATTGGAT+TGG | + | chr3_1:77222411-77222430 | Msa0376890:intron | 30.0% |
| TTAGACTTTAGTTAAGGTTC+AGG | + | chr3_1:77222557-77222576 | Msa0376890:intron | 30.0% | |
| !!! | TCAGGTTGTACATTTTTTTG+AGG | + | chr3_1:77222575-77222594 | Msa0376890:intron | 30.0% |
| ! | AATGATGGTTTTCTTCAGTT+TGG | + | chr3_1:77222837-77222856 | Msa0376890:intron | 30.0% |
| ! | AGTTCATACATCTGTTGTTT+CGG | - | chr3_1:77222971-77222990 | None:intergenic | 30.0% |
| ! | GTCGACAACAATAAGATTTT+GGG | - | chr3_1:77223102-77223121 | None:intergenic | 30.0% |
| GATTCATACACTATGAAGTA+TGG | - | chr3_1:77223159-77223178 | None:intergenic | 30.0% | |
| ! | ATTAATGTTTGAAACCTGTC+TGG | + | chr3_1:77223253-77223272 | Msa0376890:intron | 30.0% |
| !!! | ACACATGATTTTGAAACCAA+AGG | + | chr3_1:77223354-77223373 | Msa0376890:intron | 30.0% |
| AATAATAGTAATTGCCTAGG+GGG | + | chr3_1:77223390-77223409 | Msa0376890:intron | 30.0% | |
| ACAATTATAAGTAAGCACAC+TGG | - | chr3_1:77223571-77223590 | None:intergenic | 30.0% | |
| CAGATTTCATTCAATATGAC+AGG | - | chr3_1:77223692-77223711 | None:intergenic | 30.0% | |
| !!! | GACTTTTTTGTTGTCATTAC+TGG | + | chr3_1:77223807-77223826 | Msa0376890:three_prime_UTR | 30.0% |
| !!! | CTTTTTTGGTGATATTCTGT+GGG | + | chr3_1:77224007-77224026 | Msa0376890:three_prime_UTR | 30.0% |
| GCTAAGATTCAGGATAAAGA+AGG | + | chr3_1:77221932-77221951 | Msa0376890:CDS | 35.0% | |
| TGGATCTGGTTATTTGAGTA+AGG | - | chr3_1:77221963-77221982 | None:intergenic | 35.0% | |
| GCTTGTTTAGATTGAATGCT+TGG | + | chr3_1:77222181-77222200 | Msa0376890:intron | 35.0% | |
| TGAATGACTCTTGTCTGAAT+TGG | + | chr3_1:77222234-77222253 | Msa0376890:intron | 35.0% | |
| GAATGACTCTTGTCTGAATT+GGG | + | chr3_1:77222235-77222254 | Msa0376890:intron | 35.0% | |
| AATGACTCTTGTCTGAATTG+GGG | + | chr3_1:77222236-77222255 | Msa0376890:intron | 35.0% | |
| !!! | CAACTTTGCATCTTGTTTTG+AGG | + | chr3_1:77222289-77222308 | Msa0376890:CDS | 35.0% |
| AATCATTGAGCCTTCTTTGA+TGG | + | chr3_1:77222323-77222342 | Msa0376890:CDS | 35.0% | |
| AGATTGTGCAAACTTACTTG+CGG | - | chr3_1:77222386-77222405 | None:intergenic | 35.0% | |
| GAGCACTAAAATCATGTCAA+AGG | - | chr3_1:77222619-77222638 | None:intergenic | 35.0% | |
| !! | ACTATTTGGGTCTTGTTAAC+CGG | - | chr3_1:77222781-77222800 | None:intergenic | 35.0% |
| ! | GAAAACCATCATTTTCGATG+AGG | - | chr3_1:77222830-77222849 | None:intergenic | 35.0% |
| GCAAAATATCAACACAACCA+AGG | - | chr3_1:77222927-77222946 | None:intergenic | 35.0% | |
| !! | TGGTTGTGTTGATATTTTGC+TGG | + | chr3_1:77222927-77222946 | Msa0376890:intron | 35.0% |
| !! | GGTTGTGTTGATATTTTGCT+GGG | + | chr3_1:77222928-77222947 | Msa0376890:intron | 35.0% |
| ! | CGTCGACAACAATAAGATTT+TGG | - | chr3_1:77223103-77223122 | None:intergenic | 35.0% |
| CACATCTTCGTTCAAACAAT+TGG | + | chr3_1:77223178-77223197 | Msa0376890:intron | 35.0% | |
| GATGGCAACTATAATTCAAG+TGG | - | chr3_1:77223508-77223527 | None:intergenic | 35.0% | |
| TTGCCATCTATTATTGGAAG+CGG | + | chr3_1:77223520-77223539 | Msa0376890:intron | 35.0% | |
| TACTTATAATTGTGCTGTGC+AGG | + | chr3_1:77223578-77223597 | Msa0376890:intron | 35.0% | |
| GTCTACTTGATCTTCTTCTT+TGG | - | chr3_1:77223769-77223788 | None:intergenic | 35.0% | |
| !!! | AAGTAGACTGTTTTGATTGC+TGG | + | chr3_1:77223781-77223800 | Msa0376890:exon | 35.0% |
| AATTCTGTTGGAAGTTGAAC+TGG | + | chr3_1:77223868-77223887 | Msa0376890:three_prime_UTR | 35.0% | |
| !!! | GCTTTTTTGGTGATATTCTG+TGG | + | chr3_1:77224006-77224025 | Msa0376890:three_prime_UTR | 35.0% |
| GCTAAGATTCAGGATAAAGA+AGG | + | chr3_1:77221932-77221951 | Msa0376890:CDS | 35.0% | |
| TGGATCTGGTTATTTGAGTA+AGG | - | chr3_1:77221963-77221982 | None:intergenic | 35.0% | |
| GCTTGTTTAGATTGAATGCT+TGG | + | chr3_1:77222181-77222200 | Msa0376890:intron | 35.0% | |
| TGAATGACTCTTGTCTGAAT+TGG | + | chr3_1:77222234-77222253 | Msa0376890:intron | 35.0% | |
| GAATGACTCTTGTCTGAATT+GGG | + | chr3_1:77222235-77222254 | Msa0376890:intron | 35.0% | |
| AATGACTCTTGTCTGAATTG+GGG | + | chr3_1:77222236-77222255 | Msa0376890:intron | 35.0% | |
| !!! | CAACTTTGCATCTTGTTTTG+AGG | + | chr3_1:77222289-77222308 | Msa0376890:CDS | 35.0% |
| AATCATTGAGCCTTCTTTGA+TGG | + | chr3_1:77222323-77222342 | Msa0376890:CDS | 35.0% | |
| AGATTGTGCAAACTTACTTG+CGG | - | chr3_1:77222386-77222405 | None:intergenic | 35.0% | |
| GAGCACTAAAATCATGTCAA+AGG | - | chr3_1:77222619-77222638 | None:intergenic | 35.0% | |
| !! | ACTATTTGGGTCTTGTTAAC+CGG | - | chr3_1:77222781-77222800 | None:intergenic | 35.0% |
| ! | GAAAACCATCATTTTCGATG+AGG | - | chr3_1:77222830-77222849 | None:intergenic | 35.0% |
| GCAAAATATCAACACAACCA+AGG | - | chr3_1:77222927-77222946 | None:intergenic | 35.0% | |
| !! | TGGTTGTGTTGATATTTTGC+TGG | + | chr3_1:77222927-77222946 | Msa0376890:intron | 35.0% |
| !! | GGTTGTGTTGATATTTTGCT+GGG | + | chr3_1:77222928-77222947 | Msa0376890:intron | 35.0% |
| ! | CGTCGACAACAATAAGATTT+TGG | - | chr3_1:77223103-77223122 | None:intergenic | 35.0% |
| CACATCTTCGTTCAAACAAT+TGG | + | chr3_1:77223178-77223197 | Msa0376890:intron | 35.0% | |
| GATGGCAACTATAATTCAAG+TGG | - | chr3_1:77223508-77223527 | None:intergenic | 35.0% | |
| TTGCCATCTATTATTGGAAG+CGG | + | chr3_1:77223520-77223539 | Msa0376890:intron | 35.0% | |
| TACTTATAATTGTGCTGTGC+AGG | + | chr3_1:77223578-77223597 | Msa0376890:intron | 35.0% | |
| GTCTACTTGATCTTCTTCTT+TGG | - | chr3_1:77223769-77223788 | None:intergenic | 35.0% | |
| !!! | AAGTAGACTGTTTTGATTGC+TGG | + | chr3_1:77223781-77223800 | Msa0376890:exon | 35.0% |
| AATTCTGTTGGAAGTTGAAC+TGG | + | chr3_1:77223868-77223887 | Msa0376890:three_prime_UTR | 35.0% | |
| !!! | GCTTTTTTGGTGATATTCTG+TGG | + | chr3_1:77224006-77224025 | Msa0376890:three_prime_UTR | 35.0% |
| CAACGTCAAAGCTAAGATTC+AGG | + | chr3_1:77221922-77221941 | Msa0376890:CDS | 40.0% | |
| CAATTGTTTAGGAATTCCCC+CGG | + | chr3_1:77222039-77222058 | Msa0376890:intron | 40.0% | |
| CTTATCCTGGTTATACTTCC+TGG | - | chr3_1:77222355-77222374 | None:intergenic | 40.0% | |
| GCAAGTAAGTTTGCACAATC+TGG | + | chr3_1:77222385-77222404 | Msa0376890:intron | 40.0% | |
| !! | CAATCTGGCTCTTGTGTTAT+TGG | + | chr3_1:77222400-77222419 | Msa0376890:intron | 40.0% |
| ! | GGCTCTTGTGTTATTGGTAT+TGG | + | chr3_1:77222406-77222425 | Msa0376890:intron | 40.0% |
| ! | TTTTCCTACAGTTGTCAACG+AGG | - | chr3_1:77222641-77222660 | None:intergenic | 40.0% |
| ! | ATTCTATTTATAGGGGGCAC+CGG | + | chr3_1:77222759-77222778 | Msa0376890:intron | 40.0% |
| ! | TGGTTTTCTTCAGTTTGGCA+TGG | + | chr3_1:77222842-77222861 | Msa0376890:intron | 40.0% |
| TTGGCATGGCATACACTTAT+AGG | + | chr3_1:77222856-77222875 | Msa0376890:intron | 40.0% | |
| !! | TGGAACAGTTCTAAGACAGT+TGG | - | chr3_1:77223204-77223223 | None:intergenic | 40.0% |
| CACAAAATCTCAATCCAGAC+AGG | - | chr3_1:77223270-77223289 | None:intergenic | 40.0% | |
| CACACGTAAGCAGATATCTA+AGG | - | chr3_1:77223324-77223343 | None:intergenic | 40.0% | |
| TGCCATCTATTATTGGAAGC+GGG | + | chr3_1:77223521-77223540 | Msa0376890:intron | 40.0% | |
| AACTGCAGGAAAAAGAAGTG+CGG | + | chr3_1:77223631-77223650 | Msa0376890:CDS | 40.0% | |
| AAGTGATAGAACACTGTACC+TGG | - | chr3_1:77223666-77223685 | None:intergenic | 40.0% | |
| !!! | AGACTGTTTTGATTGCTGGA+AGG | + | chr3_1:77223785-77223804 | Msa0376890:exon | 40.0% |
| CAACGTCAAAGCTAAGATTC+AGG | + | chr3_1:77221922-77221941 | Msa0376890:CDS | 40.0% | |
| CAATTGTTTAGGAATTCCCC+CGG | + | chr3_1:77222039-77222058 | Msa0376890:intron | 40.0% | |
| CTTATCCTGGTTATACTTCC+TGG | - | chr3_1:77222355-77222374 | None:intergenic | 40.0% | |
| GCAAGTAAGTTTGCACAATC+TGG | + | chr3_1:77222385-77222404 | Msa0376890:intron | 40.0% | |
| !! | CAATCTGGCTCTTGTGTTAT+TGG | + | chr3_1:77222400-77222419 | Msa0376890:intron | 40.0% |
| ! | GGCTCTTGTGTTATTGGTAT+TGG | + | chr3_1:77222406-77222425 | Msa0376890:intron | 40.0% |
| ! | TTTTCCTACAGTTGTCAACG+AGG | - | chr3_1:77222641-77222660 | None:intergenic | 40.0% |
| ! | ATTCTATTTATAGGGGGCAC+CGG | + | chr3_1:77222759-77222778 | Msa0376890:intron | 40.0% |
| ! | TGGTTTTCTTCAGTTTGGCA+TGG | + | chr3_1:77222842-77222861 | Msa0376890:intron | 40.0% |
| TTGGCATGGCATACACTTAT+AGG | + | chr3_1:77222856-77222875 | Msa0376890:intron | 40.0% | |
| !! | TGGAACAGTTCTAAGACAGT+TGG | - | chr3_1:77223204-77223223 | None:intergenic | 40.0% |
| CACAAAATCTCAATCCAGAC+AGG | - | chr3_1:77223270-77223289 | None:intergenic | 40.0% | |
| CACACGTAAGCAGATATCTA+AGG | - | chr3_1:77223324-77223343 | None:intergenic | 40.0% | |
| TGCCATCTATTATTGGAAGC+GGG | + | chr3_1:77223521-77223540 | Msa0376890:intron | 40.0% | |
| AACTGCAGGAAAAAGAAGTG+CGG | + | chr3_1:77223631-77223650 | Msa0376890:CDS | 40.0% | |
| AAGTGATAGAACACTGTACC+TGG | - | chr3_1:77223666-77223685 | None:intergenic | 40.0% | |
| !!! | AGACTGTTTTGATTGCTGGA+AGG | + | chr3_1:77223785-77223804 | Msa0376890:exon | 40.0% |
| !! | CTTAGCTTTGACGTTGTCGA+TGG | - | chr3_1:77221918-77221937 | None:intergenic | 45.0% |
| TCCATCTTCCAACTGCTTTC+CGG | - | chr3_1:77222086-77222105 | None:intergenic | 45.0% | |
| CTGGATGTTGTAGTCAGCAA+GGG | - | chr3_1:77222113-77222132 | None:intergenic | 45.0% | |
| TCTGGATGTTGTAGTCAGCA+AGG | - | chr3_1:77222114-77222133 | None:intergenic | 45.0% | |
| GCTGACTACAACATCCAGAA+AGG | + | chr3_1:77222115-77222134 | Msa0376890:CDS | 45.0% | |
| !!! | CATCTTGTTTTGAGGCTTCG+TGG | + | chr3_1:77222297-77222316 | Msa0376890:CDS | 45.0% |
| ! | TTTGAGGCACATACCCTTGT+TGG | + | chr3_1:77222591-77222610 | Msa0376890:intron | 45.0% |
| !! | CATGTCAAAGGCACCAACAA+GGG | - | chr3_1:77222607-77222626 | None:intergenic | 45.0% |
| !! | TCATGTCAAAGGCACCAACA+AGG | - | chr3_1:77222608-77222627 | None:intergenic | 45.0% |
| CAATAAGTGCAAATTGCCCC+CGG | + | chr3_1:77222708-77222727 | Msa0376890:intron | 45.0% | |
| AATAAGTGCAAATTGCCCCC+GGG | + | chr3_1:77222709-77222728 | Msa0376890:intron | 45.0% | |
| CACAGCCTCATCGAAAATGA+TGG | + | chr3_1:77222822-77222841 | Msa0376890:intron | 45.0% | |
| GGTATTGTTATCACGGAACG+AGG | - | chr3_1:77222889-77222908 | None:intergenic | 45.0% | |
| GCACATACACTCCTGATTGA+AGG | + | chr3_1:77222996-77223015 | Msa0376890:intron | 45.0% | |
| ATTCGTGTCAATGTCGTGTC+TGG | + | chr3_1:77223124-77223143 | Msa0376890:intron | 45.0% | |
| GCCATCTATTATTGGAAGCG+GGG | + | chr3_1:77223522-77223541 | Msa0376890:intron | 45.0% | |
| !! | CTTAGCTTTGACGTTGTCGA+TGG | - | chr3_1:77221918-77221937 | None:intergenic | 45.0% |
| TCCATCTTCCAACTGCTTTC+CGG | - | chr3_1:77222086-77222105 | None:intergenic | 45.0% | |
| CTGGATGTTGTAGTCAGCAA+GGG | - | chr3_1:77222113-77222132 | None:intergenic | 45.0% | |
| TCTGGATGTTGTAGTCAGCA+AGG | - | chr3_1:77222114-77222133 | None:intergenic | 45.0% | |
| GCTGACTACAACATCCAGAA+AGG | + | chr3_1:77222115-77222134 | Msa0376890:CDS | 45.0% | |
| !!! | CATCTTGTTTTGAGGCTTCG+TGG | + | chr3_1:77222297-77222316 | Msa0376890:CDS | 45.0% |
| ! | TTTGAGGCACATACCCTTGT+TGG | + | chr3_1:77222591-77222610 | Msa0376890:intron | 45.0% |
| !! | CATGTCAAAGGCACCAACAA+GGG | - | chr3_1:77222607-77222626 | None:intergenic | 45.0% |
| !! | TCATGTCAAAGGCACCAACA+AGG | - | chr3_1:77222608-77222627 | None:intergenic | 45.0% |
| CAATAAGTGCAAATTGCCCC+CGG | + | chr3_1:77222708-77222727 | Msa0376890:intron | 45.0% | |
| AATAAGTGCAAATTGCCCCC+GGG | + | chr3_1:77222709-77222728 | Msa0376890:intron | 45.0% | |
| CACAGCCTCATCGAAAATGA+TGG | + | chr3_1:77222822-77222841 | Msa0376890:intron | 45.0% | |
| GGTATTGTTATCACGGAACG+AGG | - | chr3_1:77222889-77222908 | None:intergenic | 45.0% | |
| GCACATACACTCCTGATTGA+AGG | + | chr3_1:77222996-77223015 | Msa0376890:intron | 45.0% | |
| ATTCGTGTCAATGTCGTGTC+TGG | + | chr3_1:77223124-77223143 | Msa0376890:intron | 45.0% | |
| GCCATCTATTATTGGAAGCG+GGG | + | chr3_1:77223522-77223541 | Msa0376890:intron | 45.0% | |
| AAGATCAACCTCTGCTGGTC+CGG | - | chr3_1:77222061-77222080 | None:intergenic | 50.0% | |
| !!! | CTTGTTTTGAGGCTTCGTGG+TGG | + | chr3_1:77222300-77222319 | Msa0376890:CDS | 50.0% |
| !! | TGAGCCTTCTTTGATGGCGT+TGG | + | chr3_1:77222329-77222348 | Msa0376890:CDS | 50.0% |
| ! | GTTGGCCAGGAAGTATAACC+AGG | + | chr3_1:77222347-77222366 | Msa0376890:CDS | 50.0% |
| !! | TGCGGCAGATAGTCTTATCC+TGG | - | chr3_1:77222368-77222387 | None:intergenic | 50.0% |
| TGCTCCTCGTTGACAACTGT+AGG | + | chr3_1:77222634-77222653 | Msa0376890:intron | 50.0% | |
| ATAAGTGCAAATTGCCCCCG+GGG | + | chr3_1:77222710-77222729 | Msa0376890:intron | 50.0% | |
| ! | TTGGTGCTTAACCAATGCCC+CGG | - | chr3_1:77222730-77222749 | None:intergenic | 50.0% |
| GAGTCTGACAGTACACGAGT+CGG | - | chr3_1:77223035-77223054 | None:intergenic | 50.0% | |
| GCCCCGCTTCCAATAATAGA+TGG | - | chr3_1:77223526-77223545 | None:intergenic | 50.0% | |
| AAGATCAACCTCTGCTGGTC+CGG | - | chr3_1:77222061-77222080 | None:intergenic | 50.0% | |
| !!! | CTTGTTTTGAGGCTTCGTGG+TGG | + | chr3_1:77222300-77222319 | Msa0376890:CDS | 50.0% |
| !! | TGAGCCTTCTTTGATGGCGT+TGG | + | chr3_1:77222329-77222348 | Msa0376890:CDS | 50.0% |
| ! | GTTGGCCAGGAAGTATAACC+AGG | + | chr3_1:77222347-77222366 | Msa0376890:CDS | 50.0% |
| !! | TGCGGCAGATAGTCTTATCC+TGG | - | chr3_1:77222368-77222387 | None:intergenic | 50.0% |
| TGCTCCTCGTTGACAACTGT+AGG | + | chr3_1:77222634-77222653 | Msa0376890:intron | 50.0% | |
| ATAAGTGCAAATTGCCCCCG+GGG | + | chr3_1:77222710-77222729 | Msa0376890:intron | 50.0% | |
| ! | TTGGTGCTTAACCAATGCCC+CGG | - | chr3_1:77222730-77222749 | None:intergenic | 50.0% |
| GAGTCTGACAGTACACGAGT+CGG | - | chr3_1:77223035-77223054 | None:intergenic | 50.0% | |
| GCCCCGCTTCCAATAATAGA+TGG | - | chr3_1:77223526-77223545 | None:intergenic | 50.0% | |
| GTCGCTTGACTCCACCTCAA+GGG | - | chr3_1:77221894-77221913 | None:intergenic | 55.0% | |
| ! | TGTCGCTTGACTCCACCTCA+AGG | - | chr3_1:77221895-77221914 | None:intergenic | 55.0% |
| AGATCAACCTCTGCTGGTCC+GGG | - | chr3_1:77222060-77222079 | None:intergenic | 55.0% | |
| ! | CAGCAGAGGTTGATCTTCGC+CGG | + | chr3_1:77222064-77222083 | Msa0376890:CDS | 55.0% |
| GATCTTCGCCGGAAAGCAGT+TGG | + | chr3_1:77222075-77222094 | Msa0376890:CDS | 55.0% | |
| GCCGGAAAGCAGTTGGAAGA+TGG | + | chr3_1:77222082-77222101 | Msa0376890:CDS | 55.0% | |
| CTGGCCAACGCCATCAAAGA+AGG | - | chr3_1:77222336-77222355 | None:intergenic | 55.0% | |
| !! | CTTCTTTGATGGCGTTGGCC+AGG | + | chr3_1:77222334-77222353 | Msa0376890:CDS | 55.0% |
| TGGTGCTTAACCAATGCCCC+GGG | - | chr3_1:77222729-77222748 | None:intergenic | 55.0% | |
| ACAGTACACGAGTCGGACAG+CGG | - | chr3_1:77223028-77223047 | None:intergenic | 55.0% | |
| TCCTCTAACATGCACCCCCT+AGG | - | chr3_1:77223407-77223426 | None:intergenic | 55.0% | |
| TCCTGCAGTTGACAGCACGA+GGG | - | chr3_1:77223621-77223640 | None:intergenic | 55.0% | |
| TTCCTGCAGTTGACAGCACG+AGG | - | chr3_1:77223622-77223641 | None:intergenic | 55.0% | |
| GTCGCTTGACTCCACCTCAA+GGG | - | chr3_1:77221894-77221913 | None:intergenic | 55.0% | |
| ! | TGTCGCTTGACTCCACCTCA+AGG | - | chr3_1:77221895-77221914 | None:intergenic | 55.0% |
| AGATCAACCTCTGCTGGTCC+GGG | - | chr3_1:77222060-77222079 | None:intergenic | 55.0% | |
| ! | CAGCAGAGGTTGATCTTCGC+CGG | + | chr3_1:77222064-77222083 | Msa0376890:CDS | 55.0% |
| GATCTTCGCCGGAAAGCAGT+TGG | + | chr3_1:77222075-77222094 | Msa0376890:CDS | 55.0% | |
| GCCGGAAAGCAGTTGGAAGA+TGG | + | chr3_1:77222082-77222101 | Msa0376890:CDS | 55.0% | |
| CTGGCCAACGCCATCAAAGA+AGG | - | chr3_1:77222336-77222355 | None:intergenic | 55.0% | |
| !! | CTTCTTTGATGGCGTTGGCC+AGG | + | chr3_1:77222334-77222353 | Msa0376890:CDS | 55.0% |
| TGGTGCTTAACCAATGCCCC+GGG | - | chr3_1:77222729-77222748 | None:intergenic | 55.0% | |
| ACAGTACACGAGTCGGACAG+CGG | - | chr3_1:77223028-77223047 | None:intergenic | 55.0% | |
| TCCTCTAACATGCACCCCCT+AGG | - | chr3_1:77223407-77223426 | None:intergenic | 55.0% | |
| TCCTGCAGTTGACAGCACGA+GGG | - | chr3_1:77223621-77223640 | None:intergenic | 55.0% | |
| TTCCTGCAGTTGACAGCACG+AGG | - | chr3_1:77223622-77223641 | None:intergenic | 55.0% | |
| ATCAACCTCTGCTGGTCCGG+GGG | - | chr3_1:77222058-77222077 | None:intergenic | 60.0% | |
| GATCAACCTCTGCTGGTCCG+GGG | - | chr3_1:77222059-77222078 | None:intergenic | 60.0% | |
| CGGCGAAGATCAACCTCTGC+TGG | - | chr3_1:77222066-77222085 | None:intergenic | 60.0% | |
| GTGCTTAACCAATGCCCCGG+GGG | - | chr3_1:77222727-77222746 | None:intergenic | 60.0% | |
| GGTGCTTAACCAATGCCCCG+GGG | - | chr3_1:77222728-77222747 | None:intergenic | 60.0% | |
| AGCGGGACACGCCTTCAATC+AGG | - | chr3_1:77223010-77223029 | None:intergenic | 60.0% | |
| CAGTACACGAGTCGGACAGC+GGG | - | chr3_1:77223027-77223046 | None:intergenic | 60.0% | |
| ! | GCCTAGGGGGTGCATGTTAG+AGG | + | chr3_1:77223403-77223422 | Msa0376890:intron | 60.0% |
| ACCCTCGTGCTGTCAACTGC+AGG | + | chr3_1:77223617-77223636 | Msa0376890:CDS | 60.0% | |
| GAAGTGCGGACACAGCAACC+AGG | + | chr3_1:77223645-77223664 | Msa0376890:CDS | 60.0% | |
| ATCAACCTCTGCTGGTCCGG+GGG | - | chr3_1:77222058-77222077 | None:intergenic | 60.0% | |
| GATCAACCTCTGCTGGTCCG+GGG | - | chr3_1:77222059-77222078 | None:intergenic | 60.0% | |
| CGGCGAAGATCAACCTCTGC+TGG | - | chr3_1:77222066-77222085 | None:intergenic | 60.0% | |
| GTGCTTAACCAATGCCCCGG+GGG | - | chr3_1:77222727-77222746 | None:intergenic | 60.0% | |
| GGTGCTTAACCAATGCCCCG+GGG | - | chr3_1:77222728-77222747 | None:intergenic | 60.0% | |
| AGCGGGACACGCCTTCAATC+AGG | - | chr3_1:77223010-77223029 | None:intergenic | 60.0% | |
| CAGTACACGAGTCGGACAGC+GGG | - | chr3_1:77223027-77223046 | None:intergenic | 60.0% | |
| ! | GCCTAGGGGGTGCATGTTAG+AGG | + | chr3_1:77223403-77223422 | Msa0376890:intron | 60.0% |
| ACCCTCGTGCTGTCAACTGC+AGG | + | chr3_1:77223617-77223636 | Msa0376890:CDS | 60.0% | |
| GAAGTGCGGACACAGCAACC+AGG | + | chr3_1:77223645-77223664 | Msa0376890:CDS | 60.0% | |
| GAATTCCCCCGGACCAGCAG+AGG | + | chr3_1:77222050-77222069 | Msa0376890:CDS | 65.0% | |
| GCAAATTGCCCCCGGGGCAT+TGG | + | chr3_1:77222716-77222735 | Msa0376890:intron | 65.0% | |
| GAATTCCCCCGGACCAGCAG+AGG | + | chr3_1:77222050-77222069 | Msa0376890:CDS | 65.0% | |
| GCAAATTGCCCCCGGGGCAT+TGG | + | chr3_1:77222716-77222735 | Msa0376890:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 77221884 | 77224077 | 77221884 | ID=Msa0376890;Name=Msa0376890 |
| chr3_1 | mRNA | 77221884 | 77224077 | 77221884 | ID=Msa0376890-mRNA-1;Parent=Msa0376890;Name=Msa0376890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|1|1|1|0.8|5|291|117 |
| chr3_1 | exon | 77221884 | 77221953 | 77221884 | ID=Msa0376890-mRNA-1:exon:18420;Parent=Msa0376890-mRNA-1 |
| chr3_1 | exon | 77222050 | 77222136 | 77222050 | ID=Msa0376890-mRNA-1:exon:18421;Parent=Msa0376890-mRNA-1 |
| chr3_1 | exon | 77222286 | 77222388 | 77222286 | ID=Msa0376890-mRNA-1:exon:18422;Parent=Msa0376890-mRNA-1 |
| chr3_1 | exon | 77223600 | 77223666 | 77223600 | ID=Msa0376890-mRNA-1:exon:18423;Parent=Msa0376890-mRNA-1 |
| chr3_1 | exon | 77223760 | 77224077 | 77223760 | ID=Msa0376890-mRNA-1:exon:18424;Parent=Msa0376890-mRNA-1 |
| chr3_1 | CDS | 77221884 | 77221953 | 77221884 | ID=Msa0376890-mRNA-1:cds;Parent=Msa0376890-mRNA-1 |
| chr3_1 | CDS | 77222050 | 77222136 | 77222050 | ID=Msa0376890-mRNA-1:cds;Parent=Msa0376890-mRNA-1 |
| chr3_1 | CDS | 77222286 | 77222388 | 77222286 | ID=Msa0376890-mRNA-1:cds;Parent=Msa0376890-mRNA-1 |
| chr3_1 | CDS | 77223600 | 77223666 | 77223600 | ID=Msa0376890-mRNA-1:cds;Parent=Msa0376890-mRNA-1 |
| chr3_1 | CDS | 77223760 | 77223786 | 77223760 | ID=Msa0376890-mRNA-1:cds;Parent=Msa0376890-mRNA-1 |
| chr3_1 | three_prime_UTR | 77223787 | 77224077 | 77223787 | ID=Msa0376890-mRNA-1:three_prime_utr;Parent=Msa0376890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
