Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037290 | KAF5465863.1 | 100.000 | 140 | 0 | 0 | 1 | 140 | 17 | 156 | 8.35e-96 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037290 | sp|P49690|RL23_ARATH | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.70e-97 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037290 | A0A833XG65 | 100.000 | 140 | 0 | 0 | 1 | 140 | 17 | 156 | 3.99e-96 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1037290 | 0.817655 | 2.947067e-52 | -8.615850e-47 |
| Msa0003330 | Msa1037290 | 0.808524 | 2.969640e-50 | -8.615850e-47 |
| Msa0003360 | Msa1037290 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0027590 | Msa1037290 | 0.877945 | 4.181738e-69 | -8.615850e-47 |
| Msa0032780 | Msa1037290 | 0.834598 | 2.732211e-56 | -8.615850e-47 |
| Msa0040220 | Msa1037290 | 0.828291 | 9.756762e-55 | -8.615850e-47 |
| Msa0042480 | Msa1037290 | 0.860212 | 2.418258e-63 | -8.615850e-47 |
| Msa0049690 | Msa1037290 | 0.813501 | 2.479387e-51 | -8.615850e-47 |
| Msa0072570 | Msa1037290 | 0.815081 | 1.109473e-51 | -8.615850e-47 |
| Msa0075350 | Msa1037290 | 0.877940 | 4.198741e-69 | -8.615850e-47 |
| Msa0079590 | Msa1037290 | 0.862552 | 4.675632e-64 | -8.615850e-47 |
| Msa0087910 | Msa1037290 | 0.848170 | 7.269396e-60 | -8.615850e-47 |
| Msa0100420 | Msa1037290 | 0.835172 | 1.958305e-56 | -8.615850e-47 |
| Msa0114570 | Msa1037290 | 0.851986 | 6.206319e-61 | -8.615850e-47 |
| Msa0116670 | Msa1037290 | 0.825541 | 4.430751e-54 | -8.615850e-47 |
| Msa0604960 | Msa1037290 | 0.830099 | 3.553084e-55 | -8.615850e-47 |
| Msa0605890 | Msa1037290 | 0.842604 | 2.335866e-58 | -8.615850e-47 |
| Msa0617540 | Msa1037290 | 0.824330 | 8.559146e-54 | -8.615850e-47 |
| Msa0622230 | Msa1037290 | 0.828687 | 7.825521e-55 | -8.615850e-47 |
| Msa0625570 | Msa1037290 | 0.814492 | 1.498777e-51 | -8.615850e-47 |
| Msa0649890 | Msa1037290 | 0.815411 | 9.371033e-52 | -8.615850e-47 |
| Msa0653060 | Msa1037290 | 0.824186 | 9.250627e-54 | -8.615850e-47 |
| Msa0681220 | Msa1037290 | 0.826687 | 2.365689e-54 | -8.615850e-47 |
| Msa0686550 | Msa1037290 | 0.806731 | 7.133101e-50 | -8.615850e-47 |
| Msa0694400 | Msa1037290 | 0.813656 | 2.292263e-51 | -8.615850e-47 |
| Msa0704860 | Msa1037290 | 0.812797 | 3.538574e-51 | -8.615850e-47 |
| Msa0705800 | Msa1037290 | 0.897844 | 9.475517e-77 | -8.615850e-47 |
| Msa0711960 | Msa1037290 | 0.818395 | 2.004477e-52 | -8.615850e-47 |
| Msa0712610 | Msa1037290 | 0.895591 | 8.286327e-76 | -8.615850e-47 |
| Msa0717380 | Msa1037290 | 0.834259 | 3.323345e-56 | -8.615850e-47 |
| Msa0729200 | Msa1037290 | 0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0748350 | Msa1037290 | 0.813497 | 2.484135e-51 | -8.615850e-47 |
| Msa0752910 | Msa1037290 | 0.906919 | 8.867421e-81 | -8.615850e-47 |
| Msa0758420 | Msa1037290 | 0.825689 | 4.088355e-54 | -8.615850e-47 |
| Msa0776890 | Msa1037290 | 0.815258 | 1.013798e-51 | -8.615850e-47 |
| Msa0781080 | Msa1037290 | 0.872688 | 2.624429e-67 | -8.615850e-47 |
| Msa0781310 | Msa1037290 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0783630 | Msa1037290 | 0.817657 | 2.943214e-52 | -8.615850e-47 |
| Msa0786660 | Msa1037290 | 0.838318 | 3.087188e-57 | -8.615850e-47 |
| Msa0788380 | Msa1037290 | 0.899543 | 1.785689e-77 | -8.615850e-47 |
| Msa0792420 | Msa1037290 | 0.832555 | 8.841279e-56 | -8.615850e-47 |
| Msa0799830 | Msa1037290 | 0.845181 | 4.765612e-59 | -8.615850e-47 |
| Msa0821070 | Msa1037290 | 0.803763 | 2.985108e-49 | -8.615850e-47 |
| Msa0822580 | Msa1037290 | 0.900988 | 4.219573e-78 | -8.615850e-47 |
| Msa0827380 | Msa1037290 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
| Msa0838070 | Msa1037290 | 0.862243 | 5.816962e-64 | -8.615850e-47 |
| Msa0128330 | Msa1037290 | 0.837622 | 4.662874e-57 | -8.615850e-47 |
| Msa0128750 | Msa1037290 | 0.860353 | 2.192054e-63 | -8.615850e-47 |
| Msa0133540 | Msa1037290 | 0.800717 | 1.264057e-48 | -8.615850e-47 |
| Msa0134580 | Msa1037290 | 0.845860 | 3.120026e-59 | -8.615850e-47 |
| Msa0138890 | Msa1037290 | 0.861922 | 7.297593e-64 | -8.615850e-47 |
| Msa0167860 | Msa1037290 | 0.831992 | 1.218581e-55 | -8.615850e-47 |
| Msa0172930 | Msa1037290 | 0.848121 | 7.499999e-60 | -8.615850e-47 |
| Msa0173530 | Msa1037290 | 0.822650 | 2.115168e-53 | -8.615850e-47 |
| Msa0174580 | Msa1037290 | 0.840308 | 9.400556e-58 | -8.615850e-47 |
| Msa0175000 | Msa1037290 | 0.803914 | 2.776940e-49 | -8.615850e-47 |
| Msa0181490 | Msa1037290 | 0.809115 | 2.218816e-50 | -8.615850e-47 |
| Msa0191450 | Msa1037290 | 0.911708 | 4.476160e-83 | -8.615850e-47 |
| Msa0191550 | Msa1037290 | 0.908693 | 1.293034e-81 | -8.615850e-47 |
| Msa0192750 | Msa1037290 | 0.853295 | 2.626876e-61 | -8.615850e-47 |
| Msa0194940 | Msa1037290 | 0.898318 | 5.968614e-77 | -8.615850e-47 |
| Msa0197980 | Msa1037290 | 0.808136 | 3.592218e-50 | -8.615850e-47 |
| Msa0210330 | Msa1037290 | 0.809092 | 2.244179e-50 | -8.615850e-47 |
| Msa0210360 | Msa1037290 | 0.892876 | 1.059475e-74 | -8.615850e-47 |
| Msa0219120 | Msa1037290 | 0.806673 | 7.336929e-50 | -8.615850e-47 |
| Msa0222730 | Msa1037290 | 0.832297 | 1.024430e-55 | -8.615850e-47 |
| Msa0229150 | Msa1037290 | 0.820150 | 7.986980e-53 | -8.615850e-47 |
| Msa0235050 | Msa1037290 | 0.854118 | 1.522433e-61 | -8.615850e-47 |
| Msa0369410 | Msa1037290 | 0.850616 | 1.513545e-60 | -8.615850e-47 |
| Msa0376830 | Msa1037290 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0376890 | Msa1037290 | 0.840259 | 9.682455e-58 | -8.615850e-47 |
| Msa0426090 | Msa1037290 | 0.859097 | 5.234668e-63 | -8.615850e-47 |
| Msa0426250 | Msa1037290 | 0.857001 | 2.196635e-62 | -8.615850e-47 |
| Msa0436750 | Msa1037290 | 0.826050 | 3.355283e-54 | -8.615850e-47 |
| Msa0438960 | Msa1037290 | 0.817118 | 3.892875e-52 | -8.615850e-47 |
| Msa0463520 | Msa1037290 | 0.831529 | 1.585551e-55 | -8.615850e-47 |
| Msa0471880 | Msa1037290 | 0.844089 | 9.379442e-59 | -8.615850e-47 |
| Msa0472480 | Msa1037290 | 0.852710 | 3.860455e-61 | -8.615850e-47 |
| Msa0473570 | Msa1037290 | 0.809870 | 1.528104e-50 | -8.615850e-47 |
| Msa0475810 | Msa1037290 | 0.820414 | 6.946416e-53 | -8.615850e-47 |
| Msa0481520 | Msa1037290 | 0.881755 | 1.844304e-70 | -8.615850e-47 |
| Msa0481850 | Msa1037290 | 0.896576 | 3.231317e-76 | -8.615850e-47 |
| Msa1021120 | Msa1037290 | 0.806768 | 7.007487e-50 | -8.615850e-47 |
| Msa1037290 | Msa1040160 | 0.881689 | 1.947722e-70 | -8.615850e-47 |
| Msa1037290 | Msa1041680 | 0.898259 | 6.324391e-77 | -8.615850e-47 |
| Msa1037290 | Msa1042100 | 0.853335 | 2.557890e-61 | -8.615850e-47 |
| Msa1037290 | Msa1078870 | 0.897534 | 1.280557e-76 | -8.615850e-47 |
| Msa1037290 | Msa1078980 | 0.900748 | 5.366846e-78 | -8.615850e-47 |
| Msa1037290 | Msa1080350 | 0.886479 | 3.300693e-72 | -8.615850e-47 |
| Msa1037290 | Msa1082170 | 0.889947 | 1.533445e-73 | -8.615850e-47 |
| Msa1037290 | Msa1083370 | 0.858576 | 7.495387e-63 | -8.615850e-47 |
| Msa1037290 | Msa1096900 | 0.843182 | 1.639323e-58 | -8.615850e-47 |
| Msa1037290 | Msa1125860 | 0.878969 | 1.826196e-69 | -8.615850e-47 |
| Msa1037290 | Msa1126060 | 0.879777 | 9.442885e-70 | -8.615850e-47 |
| Msa1037290 | Msa1126520 | 0.931997 | 1.647369e-94 | -8.615850e-47 |
| Msa1037290 | Msa1147670 | 0.810316 | 1.224874e-50 | -8.615850e-47 |
| Msa1037290 | Msa1164150 | 0.987621 | 6.359484e-171 | -8.615850e-47 |
| Msa1037290 | Msa1165640 | 0.833968 | 3.930676e-56 | -8.615850e-47 |
| Msa1037290 | Msa1166570 | 0.902524 | 8.874964e-79 | -8.615850e-47 |
| Msa1037290 | Msa1167540 | 0.840815 | 6.928386e-58 | -8.615850e-47 |
| Msa1037290 | Msa1167550 | 0.801125 | 1.043302e-48 | -8.615850e-47 |
| Msa1037290 | Msa1169180 | 0.900658 | 5.878018e-78 | -8.615850e-47 |
| Msa1037290 | Msa1180000 | 0.847044 | 1.483206e-59 | -8.615850e-47 |
| Msa1037290 | Msa1186030 | 0.867020 | 1.860976e-65 | -8.615850e-47 |
| Msa1037290 | Msa1203560 | 0.804785 | 1.828022e-49 | -8.615850e-47 |
| Msa1037290 | Msa1208330 | 0.816906 | 4.342260e-52 | -8.615850e-47 |
| Msa1037290 | Msa1218170 | 0.862393 | 5.231812e-64 | -8.615850e-47 |
| Msa1037290 | Msa1228490 | 0.808477 | 3.038436e-50 | -8.615850e-47 |
| Msa1037290 | Msa1240270 | 0.878986 | 1.800209e-69 | -8.615850e-47 |
| Msa1037290 | Msa1256840 | 0.856167 | 3.861915e-62 | -8.615850e-47 |
| Msa1037290 | Msa1258540 | 0.851127 | 1.086368e-60 | -8.615850e-47 |
| Msa1037290 | Msa1270640 | 0.851340 | 9.459517e-61 | -8.615850e-47 |
| Msa1037290 | Msa1270710 | 0.846458 | 2.144386e-59 | -8.615850e-47 |
| Msa1037290 | Msa1295150 | 0.858992 | 5.625947e-63 | -8.615850e-47 |
| Msa1037290 | Msa1295170 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa1037290 | Msa1301640 | 0.814218 | 1.722768e-51 | -8.615850e-47 |
| Msa1037290 | Msa1311400 | 0.919823 | 2.779121e-87 | -8.615850e-47 |
| Msa1037290 | Msa1321790 | 0.820247 | 7.588679e-53 | -8.615850e-47 |
| Msa1037290 | Msa1332250 | 0.876841 | 1.012612e-68 | -8.615850e-47 |
| Msa1037290 | Msa1338190 | 0.810704 | 1.009963e-50 | -8.615850e-47 |
| Msa1037290 | Msa1351020 | 0.826330 | 2.878791e-54 | -8.615850e-47 |
| Msa1037290 | Msa1356790 | 0.889292 | 2.758951e-73 | -8.615850e-47 |
| Msa1037290 | Msa1362210 | 0.811744 | 6.006883e-51 | -8.615850e-47 |
| Msa1037290 | Msa1362790 | 0.857009 | 2.185394e-62 | -8.615850e-47 |
| Msa1037290 | Msa1368920 | 0.999766 | 0.000000e+00 | -8.615850e-47 |
| Msa1037290 | Msa1374240 | 0.880294 | 6.181476e-70 | -8.615850e-47 |
| Msa1037290 | Msa1374480 | 0.824981 | 6.012110e-54 | -8.615850e-47 |
| Msa1037290 | Msa1392590 | 0.872985 | 2.087077e-67 | -8.615850e-47 |
| Msa1037290 | Msa1397100 | 0.843952 | 1.020907e-58 | -8.615850e-47 |
| Msa1037290 | Msa1397660 | 0.808437 | 3.099204e-50 | -8.615850e-47 |
| Msa1037290 | Msa1403910 | 0.851597 | 8.001794e-61 | -8.615850e-47 |
| Msa1037290 | Msa1406080 | 0.852669 | 3.967366e-61 | -8.615850e-47 |
| Msa1037290 | Msa1418770 | 0.864003 | 1.662300e-64 | -8.615850e-47 |
| Msa1037290 | Msa1426120 | 0.895898 | 6.182890e-76 | -8.615850e-47 |
| Msa1037290 | Msa1426370 | 0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa1037290 | Msa1426490 | 0.815035 | 1.136215e-51 | -8.615850e-47 |
| Msa1037290 | Msa1432310 | 0.803147 | 4.005034e-49 | -8.615850e-47 |
| Msa1037290 | Msa1437280 | 0.817265 | 3.606199e-52 | -8.615850e-47 |
| Msa1037290 | Msa1446410 | 0.856728 | 2.643949e-62 | -8.615850e-47 |
| Msa1037290 | Msa1449160 | 0.826415 | 2.746699e-54 | -8.615850e-47 |
| Msa1037290 | Msa1455950 | 0.813688 | 2.255679e-51 | -8.615850e-47 |
| Msa1037290 | Msa1463570 | 0.840728 | 7.301485e-58 | -8.615850e-47 |
| Msa0257450 | Msa1037290 | 0.815643 | 8.321492e-52 | -8.615850e-47 |
| Msa0277600 | Msa1037290 | 0.802280 | 6.045533e-49 | -8.615850e-47 |
| Msa0281370 | Msa1037290 | 0.822901 | 1.848001e-53 | -8.615850e-47 |
| Msa0295880 | Msa1037290 | 0.803822 | 2.901800e-49 | -8.615850e-47 |
| Msa0297830 | Msa1037290 | 0.883761 | 3.412583e-71 | -8.615850e-47 |
| Msa0298870 | Msa1037290 | 0.803478 | 3.419875e-49 | -8.615850e-47 |
| Msa0301220 | Msa1037290 | 0.850830 | 1.317521e-60 | -8.615850e-47 |
| Msa0312210 | Msa1037290 | 0.815762 | 7.831037e-52 | -8.615850e-47 |
| Msa0313520 | Msa1037290 | 0.822705 | 2.053296e-53 | -8.615850e-47 |
| Msa0315430 | Msa1037290 | 0.841169 | 5.594009e-58 | -8.615850e-47 |
| Msa0334030 | Msa1037290 | 0.805991 | 1.021820e-49 | -8.615850e-47 |
| Msa0335840 | Msa1037290 | 0.894211 | 3.053046e-75 | -8.615850e-47 |
| Msa0341880 | Msa1037290 | 0.803527 | 3.340620e-49 | -8.615850e-47 |
| Msa0484730 | Msa1037290 | 0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0517480 | Msa1037290 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0529900 | Msa1037290 | 0.854888 | 9.117841e-62 | -8.615850e-47 |
| Msa0550420 | Msa1037290 | 0.824088 | 9.755269e-54 | -8.615850e-47 |
| Msa0573550 | Msa1037290 | 0.857422 | 1.650192e-62 | -8.615850e-47 |
| Msa0579830 | Msa1037290 | 0.828016 | 1.136204e-54 | -8.615850e-47 |
| Msa0582070 | Msa1037290 | 0.824918 | 6.221435e-54 | -8.615850e-47 |
| Msa0584030 | Msa1037290 | 0.871105 | 8.806462e-67 | -8.615850e-47 |
| Msa0596370 | Msa1037290 | 0.838284 | 3.150118e-57 | -8.615850e-47 |
| Msa0597240 | Msa1037290 | 0.809626 | 1.724604e-50 | -8.615850e-47 |
| Msa0861320 | Msa1037290 | 0.867056 | 1.813385e-65 | -8.615850e-47 |
| Msa0888810 | Msa1037290 | 0.810424 | 1.160690e-50 | -8.615850e-47 |
| Msa0915540 | Msa1037290 | 0.854806 | 9.630279e-62 | -8.615850e-47 |
| Msa0929700 | Msa1037290 | 0.831162 | 1.951364e-55 | -8.615850e-47 |
| Msa0945480 | Msa1037290 | 0.836528 | 8.879259e-57 | -8.615850e-47 |
| Msa0966670 | Msa1037290 | 0.852242 | 5.250058e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037290 | MtrunA17_Chr7g0261941 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.11e-98 | 278 |
| Msa1037290 | MtrunA17_Chr1g0183341 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.11e-98 | 278 |
| Msa1037290 | MtrunA17_Chr1g0157171 | 83.471 | 121 | 6 | 1 | 16 | 136 | 1 | 107 | 2.28e-66 | 197 |
| Msa1037290 | MtrunA17_Chr3g0079201 | 86.076 | 79 | 11 | 0 | 62 | 140 | 1 | 79 | 5.98e-45 | 141 |
| Msa1037290 | MtrunA17_Chr5g0422671 | 86.567 | 67 | 9 | 0 | 74 | 140 | 2 | 68 | 8.91e-38 | 123 |
| Msa1037290 | MtrunA17_Chr3g0092871 | 89.796 | 49 | 5 | 0 | 14 | 62 | 16 | 64 | 1.21e-24 | 90.1 |
| Msa1037290 | MtrunA17_Chr5g0422681 | 81.633 | 49 | 9 | 0 | 14 | 62 | 16 | 64 | 8.46e-21 | 80.1 |
| Msa1037290 | MtrunA17_Chr4g0015931 | 36.522 | 115 | 65 | 3 | 26 | 136 | 8 | 118 | 3.90e-16 | 69.7 |
| Msa1037290 | MtrunA17_CPg0492591 | 36.522 | 115 | 65 | 3 | 26 | 136 | 8 | 118 | 3.90e-16 | 69.7 |
| Msa1037290 | MtrunA17_Chr2g0322131 | 37.255 | 102 | 57 | 2 | 26 | 124 | 8 | 105 | 4.36e-15 | 67.0 |
| Msa1037290 | MtrunA17_Chr4g0017131 | 37.500 | 88 | 48 | 2 | 26 | 110 | 8 | 91 | 3.01e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037290 | AT2G33370.1 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.73e-98 | 279 |
| Msa1037290 | AT1G04480.1 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.73e-98 | 279 |
| Msa1037290 | AT3G04400.1 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.73e-98 | 279 |
| Msa1037290 | AT2G33370.2 | 100.000 | 125 | 0 | 0 | 16 | 140 | 1 | 125 | 4.84e-88 | 252 |
| Msa1037290 | AT3G04400.2 | 100.000 | 125 | 0 | 0 | 16 | 140 | 1 | 125 | 4.84e-88 | 252 |
| Msa1037290 | ATCG00780.1 | 34.783 | 115 | 67 | 3 | 26 | 136 | 8 | 118 | 5.12e-15 | 67.0 |
Find 65 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGATTCATCAAGGGAATT+TGG | 0.133338 | 7_1:-73848380 | Msa1037290:three_prime_UTR |
| TTTACCTTTCATTTCTCCTT+TGG | 0.232028 | 7_1:+73849167 | None:intergenic |
| TTACCTTTCATTTCTCCTTT+GGG | 0.290146 | 7_1:+73849168 | None:intergenic |
| TCGATTCATCAAGGGAATTT+GGG | 0.335431 | 7_1:-73848379 | Msa1037290:three_prime_UTR |
| ATTCTTAGCTCCGGTGTTAT+CGG | 0.357276 | 7_1:+73849517 | None:intergenic |
| AAACGAAAGAGGATTGAGTT+AGG | 0.365890 | 7_1:-73849764 | Msa1037290:five_prime_UTR |
| AAATACATTCAACCTAAAAC+TGG | 0.367714 | 7_1:+73848632 | None:intergenic |
| ACATGAAAACACCGTCCTTT+CGG | 0.371684 | 7_1:+73849336 | None:intergenic |
| GATCCGCGGGTAACAAGTTC+AGG | 0.386005 | 7_1:-73849580 | Msa1037290:CDS |
| GGAAGGAGTGTGCTGATCTA+TGG | 0.394494 | 7_1:-73848741 | Msa1037290:CDS |
| CCTTCCTTTGATACCTTTGA+CGG | 0.396996 | 7_1:+73849481 | None:intergenic |
| TAATTGTGATCAACAATGAT+TGG | 0.401689 | 7_1:-73848411 | Msa1037290:three_prime_UTR |
| TTGTTGTACTGCGAAGTCTT+TGG | 0.411315 | 7_1:-73848574 | Msa1037290:three_prime_UTR |
| AACGAAAGAGGATTGAGTTA+GGG | 0.418095 | 7_1:-73849763 | Msa1037290:five_prime_UTR |
| AGCACCTTCTTACGGAGATC+AGG | 0.422915 | 7_1:+73849395 | None:intergenic |
| TTCTGCTTGCGTTGGTGACA+TGG | 0.443666 | 7_1:-73849444 | Msa1037290:CDS |
| CAATTCACCGTCGCCGCCAC+TGG | 0.459295 | 7_1:+73849542 | None:intergenic |
| TTAGCAGCACTTGCAATCCT+AGG | 0.471348 | 7_1:+73848718 | None:intergenic |
| CTCTACATCATTTCCGTCAA+AGG | 0.478393 | 7_1:-73849494 | Msa1037290:CDS |
| GGTGATGGCCACCGTGAAGA+AGG | 0.480460 | 7_1:-73849423 | Msa1037290:CDS |
| CGTTTGCCTTCTGCTTGCGT+TGG | 0.482632 | 7_1:-73849452 | Msa1037290:CDS |
| TCTGCTATCACTGGTCCAAT+CGG | 0.485775 | 7_1:-73848763 | Msa1037290:CDS |
| TAACAAGTTCAGGATGTCAC+TGG | 0.500497 | 7_1:-73849570 | Msa1037290:CDS |
| CGGCAGGAAGCACCTTCTTA+CGG | 0.502055 | 7_1:+73849387 | None:intergenic |
| ATCAGGCTTACCCTTCTTCA+CGG | 0.504036 | 7_1:+73849412 | None:intergenic |
| CTCAGGTCGCGGAGGATCCG+CGG | 0.504873 | 7_1:-73849594 | Msa1037290:intron |
| GATGAATATATAAACGAAAG+AGG | 0.505172 | 7_1:-73849775 | None:intergenic |
| CTGCTATCACTGGTCCAATC+GGG | 0.511052 | 7_1:-73848762 | Msa1037290:CDS |
| ACAAACAACTCTTTAGAACT+AGG | 0.529116 | 7_1:+73848539 | None:intergenic |
| TTGTATTGTGCAGACAATGC+TGG | 0.531818 | 7_1:-73849204 | Msa1037290:intron |
| ATTGTAGGGTCTGCTATCAC+TGG | 0.534637 | 7_1:-73848772 | Msa1037290:intron |
| CAACGCAAGCAGAAGGCAAA+CGG | 0.538758 | 7_1:+73849453 | None:intergenic |
| TCAGCACACTCCTTCCCGAT+TGG | 0.539409 | 7_1:+73848748 | None:intergenic |
| CGCTGGCGAACGATGACGGC+AGG | 0.540043 | 7_1:+73849371 | None:intergenic |
| ACACCGTCCTTTCGGCGCCA+TGG | 0.550488 | 7_1:+73849344 | None:intergenic |
| CCGTCAAAGGTATCAAAGGA+AGG | 0.551618 | 7_1:-73849481 | Msa1037290:CDS |
| CATTGATATGCAAATGGCAC+AGG | 0.552893 | 7_1:+73848486 | None:intergenic |
| TCAGGTCGCGGAGGATCCGC+GGG | 0.560803 | 7_1:-73849593 | Msa1037290:intron |
| AGTGTGCTGATCTATGGCCT+AGG | 0.561029 | 7_1:-73848735 | Msa1037290:CDS |
| TTCGGCGCCATGGTTTACGC+TGG | 0.563205 | 7_1:+73849354 | None:intergenic |
| TCTCAAGATCAAATAACTGA+TGG | 0.564644 | 7_1:+73848461 | None:intergenic |
| GGTGTTATTGTTAATCCCAA+AGG | 0.565013 | 7_1:-73849183 | Msa1037290:CDS |
| TAAGCCTGATCTCCGTAAGA+AGG | 0.569085 | 7_1:-73849399 | Msa1037290:CDS |
| ATGGTGCATTGATATGCAAA+TGG | 0.573908 | 7_1:+73848480 | None:intergenic |
| ATTTCCGTCAAAGGTATCAA+AGG | 0.575410 | 7_1:-73849485 | Msa1037290:CDS |
| GGGTCTACCAGTGGCGGCGA+CGG | 0.576990 | 7_1:-73849549 | Msa1037290:CDS |
| TTTGCTAATCGATTCATCAA+GGG | 0.578271 | 7_1:-73848387 | Msa1037290:three_prime_UTR |
| GTGATGGCCACCGTGAAGAA+GGG | 0.579374 | 7_1:-73849422 | Msa1037290:CDS |
| TTGCGTTGGTGACATGGTGA+TGG | 0.588839 | 7_1:-73849438 | Msa1037290:CDS |
| GTTTATTCTTGTGCAATCTG+TGG | 0.589070 | 7_1:-73848516 | Msa1037290:three_prime_UTR |
| GATGTAGAGATTCTTAGCTC+CGG | 0.596136 | 7_1:+73849508 | None:intergenic |
| TTTACGCTGGCGAACGATGA+CGG | 0.598744 | 7_1:+73849367 | None:intergenic |
| AAACCATGGCGCCGAAAGGA+CGG | 0.604162 | 7_1:-73849347 | Msa1037290:CDS |
| GCGTAAACCATGGCGCCGAA+AGG | 0.604166 | 7_1:-73849351 | Msa1037290:CDS |
| AACAAGTTCAGGATGTCACT+GGG | 0.607031 | 7_1:-73849569 | Msa1037290:CDS |
| ATGTCACCAACGCAAGCAGA+AGG | 0.609870 | 7_1:+73849446 | None:intergenic |
| GTCACTGGGTCTACCAGTGG+CGG | 0.621290 | 7_1:-73849555 | Msa1037290:CDS |
| GTGAATTGCGCCGATAACAC+CGG | 0.624326 | 7_1:-73849527 | Msa1037290:CDS |
| AATCCCAAAGGAGAAATGAA+AGG | 0.624552 | 7_1:-73849171 | Msa1037290:intron |
| TCGTTCGCCAGCGTAAACCA+TGG | 0.647146 | 7_1:-73849361 | Msa1037290:CDS |
| GCAGCAGCAATGTCGAAGAG+AGG | 0.651240 | 7_1:-73849707 | Msa1037290:intron |
| GATGTCACTGGGTCTACCAG+TGG | 0.653286 | 7_1:-73849558 | Msa1037290:CDS |
| TATCACTGGTCCAATCGGGA+AGG | 0.675150 | 7_1:-73848758 | Msa1037290:CDS |
| CATCCTGAACTTGTTACCCG+CGG | 0.683379 | 7_1:+73849577 | None:intergenic |
| AGGCTTACCCTTCTTCACGG+TGG | 0.718796 | 7_1:+73849415 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATCAGTATTAAAAT+TGG | - | chr7_1:73849238-73849257 | Msa1037290:intron | 10.0% |
| !! | TTAATAATCAGTATTAAAAT+TGG | - | chr7_1:73849238-73849257 | Msa1037290:intron | 10.0% |
| !!! | TTTTATTTCTAGTATTGATA+AGG | - | chr7_1:73849451-73849470 | Msa1037290:CDS | 15.0% |
| !!! | TTTTATTTCTAGTATTGATA+AGG | - | chr7_1:73849451-73849470 | Msa1037290:CDS | 15.0% |
| !! | TGATTCTTACTTAATATTTC+TGG | - | chr7_1:73848904-73848923 | Msa1037290:intron | 20.0% |
| !! | TAATCAGTATTAAAATTGGT+TGG | - | chr7_1:73849242-73849261 | Msa1037290:intron | 20.0% |
| !!! | AATGTATTTTGAAATGTTTG+AGG | - | chr7_1:73849514-73849533 | Msa1037290:CDS | 20.0% |
| !! | TGATTCTTACTTAATATTTC+TGG | - | chr7_1:73848904-73848923 | Msa1037290:intron | 20.0% |
| !! | TAATCAGTATTAAAATTGGT+TGG | - | chr7_1:73849242-73849261 | Msa1037290:intron | 20.0% |
| !!! | AATGTATTTTGAAATGTTTG+AGG | - | chr7_1:73849514-73849533 | Msa1037290:CDS | 20.0% |
| !! | ATTTTCATCTTCAGATTCTT+AGG | - | chr7_1:73848457-73848476 | Msa1037290:three_prime_UTR | 25.0% |
| ! | TGGGTAATATATGTAATGAT+TGG | - | chr7_1:73849056-73849075 | Msa1037290:intron | 25.0% |
| !! | AATGATTGGTGTTTAATAAG+TGG | - | chr7_1:73849070-73849089 | Msa1037290:intron | 25.0% |
| ! | AAATACATTCAACCTAAAAC+TGG | + | chr7_1:73849503-73849522 | None:intergenic | 25.0% |
| ! | TAATTGTGATCAACAATGAT+TGG | - | chr7_1:73849721-73849740 | Msa1037290:five_prime_UTR | 25.0% |
| !! | ATTTTCATCTTCAGATTCTT+AGG | - | chr7_1:73848457-73848476 | Msa1037290:three_prime_UTR | 25.0% |
| ! | TGGGTAATATATGTAATGAT+TGG | - | chr7_1:73849056-73849075 | Msa1037290:intron | 25.0% |
| !! | AATGATTGGTGTTTAATAAG+TGG | - | chr7_1:73849070-73849089 | Msa1037290:intron | 25.0% |
| ! | AAATACATTCAACCTAAAAC+TGG | + | chr7_1:73849503-73849522 | None:intergenic | 25.0% |
| ! | TAATTGTGATCAACAATGAT+TGG | - | chr7_1:73849721-73849740 | Msa1037290:five_prime_UTR | 25.0% |
| ! | TTATTAAAACGCGCTTTTGT+AGG | + | chr7_1:73848500-73848519 | None:intergenic | 30.0% |
| !! | CGATTTTCATTTTGTTTCTC+AGG | - | chr7_1:73848521-73848540 | Msa1037290:three_prime_UTR | 30.0% |
| TTACCTTTCATTTCTCCTTT+GGG | + | chr7_1:73848967-73848986 | None:intergenic | 30.0% | |
| TTTACCTTTCATTTCTCCTT+TGG | + | chr7_1:73848968-73848987 | None:intergenic | 30.0% | |
| TCAGTATTAAAATTGGTTGG+AGG | - | chr7_1:73849245-73849264 | Msa1037290:intron | 30.0% | |
| ATTAAAATTGGTTGGAGGAT+CGG | - | chr7_1:73849250-73849269 | Msa1037290:intron | 30.0% | |
| !! | TATGTTTTTATCGCCGTTTT+TGG | - | chr7_1:73849286-73849305 | Msa1037290:intron | 30.0% |
| CACAACATCAAAACCAAAAA+CGG | + | chr7_1:73849302-73849321 | None:intergenic | 30.0% | |
| !! | TTCGTGTTGATTGTAATTGT+AGG | - | chr7_1:73849345-73849364 | Msa1037290:CDS | 30.0% |
| !! | TCGTGTTGATTGTAATTGTA+GGG | - | chr7_1:73849346-73849365 | Msa1037290:CDS | 30.0% |
| ! | ATTTGATGTTGTCCAGTTTT+AGG | - | chr7_1:73849488-73849507 | Msa1037290:CDS | 30.0% |
| !! | ACAAACAACTCTTTAGAACT+AGG | + | chr7_1:73849596-73849615 | None:intergenic | 30.0% |
| TCTCAAGATCAAATAACTGA+TGG | + | chr7_1:73849674-73849693 | None:intergenic | 30.0% | |
| !! | TTTTGCTAATCGATTCATCA+AGG | - | chr7_1:73849744-73849763 | Msa1037290:five_prime_UTR | 30.0% |
| ! | TTTGCTAATCGATTCATCAA+GGG | - | chr7_1:73849745-73849764 | Msa1037290:five_prime_UTR | 30.0% |
| ! | TTATTAAAACGCGCTTTTGT+AGG | + | chr7_1:73848500-73848519 | None:intergenic | 30.0% |
| !! | CGATTTTCATTTTGTTTCTC+AGG | - | chr7_1:73848521-73848540 | Msa1037290:three_prime_UTR | 30.0% |
| TTACCTTTCATTTCTCCTTT+GGG | + | chr7_1:73848967-73848986 | None:intergenic | 30.0% | |
| TTTACCTTTCATTTCTCCTT+TGG | + | chr7_1:73848968-73848987 | None:intergenic | 30.0% | |
| TCAGTATTAAAATTGGTTGG+AGG | - | chr7_1:73849245-73849264 | Msa1037290:intron | 30.0% | |
| ATTAAAATTGGTTGGAGGAT+CGG | - | chr7_1:73849250-73849269 | Msa1037290:intron | 30.0% | |
| !! | TATGTTTTTATCGCCGTTTT+TGG | - | chr7_1:73849286-73849305 | Msa1037290:intron | 30.0% |
| CACAACATCAAAACCAAAAA+CGG | + | chr7_1:73849302-73849321 | None:intergenic | 30.0% | |
| !! | TTCGTGTTGATTGTAATTGT+AGG | - | chr7_1:73849345-73849364 | Msa1037290:CDS | 30.0% |
| !! | TCGTGTTGATTGTAATTGTA+GGG | - | chr7_1:73849346-73849365 | Msa1037290:CDS | 30.0% |
| ! | ATTTGATGTTGTCCAGTTTT+AGG | - | chr7_1:73849488-73849507 | Msa1037290:CDS | 30.0% |
| !! | ACAAACAACTCTTTAGAACT+AGG | + | chr7_1:73849596-73849615 | None:intergenic | 30.0% |
| TCTCAAGATCAAATAACTGA+TGG | + | chr7_1:73849674-73849693 | None:intergenic | 30.0% | |
| !! | TTTTGCTAATCGATTCATCA+AGG | - | chr7_1:73849744-73849763 | Msa1037290:five_prime_UTR | 30.0% |
| ! | TTTGCTAATCGATTCATCAA+GGG | - | chr7_1:73849745-73849764 | Msa1037290:five_prime_UTR | 30.0% |
| AAACGAAAGAGGATTGAGTT+AGG | - | chr7_1:73848368-73848387 | Msa1037290:three_prime_UTR | 35.0% | |
| AACGAAAGAGGATTGAGTTA+GGG | - | chr7_1:73848369-73848388 | Msa1037290:three_prime_UTR | 35.0% | |
| !! | ATTTCCGTCAAAGGTATCAA+AGG | - | chr7_1:73848647-73848666 | Msa1037290:three_prime_UTR | 35.0% |
| !! | GGTGTTATTGTTAATCCCAA+AGG | - | chr7_1:73848949-73848968 | Msa1037290:intron | 35.0% |
| AATCCCAAAGGAGAAATGAA+AGG | - | chr7_1:73848961-73848980 | Msa1037290:intron | 35.0% | |
| ATGATAATATCGACGTAGGT+GGG | - | chr7_1:73849037-73849056 | Msa1037290:intron | 35.0% | |
| ACTGCTGTGTCTTCAATAAT+TGG | - | chr7_1:73849152-73849171 | Msa1037290:intron | 35.0% | |
| TTAAAATTGGTTGGAGGATC+GGG | - | chr7_1:73849251-73849270 | Msa1037290:intron | 35.0% | |
| !! | GGTTTTGATGTTGTGCTTTT+AGG | - | chr7_1:73849307-73849326 | Msa1037290:intron | 35.0% |
| GTTTATTCTTGTGCAATCTG+TGG | - | chr7_1:73849616-73849635 | Msa1037290:intron | 35.0% | |
| ! | ATGGTGCATTGATATGCAAA+TGG | + | chr7_1:73849655-73849674 | None:intergenic | 35.0% |
| ! | ATCGATTCATCAAGGGAATT+TGG | - | chr7_1:73849752-73849771 | Msa1037290:five_prime_UTR | 35.0% |
| TCGATTCATCAAGGGAATTT+GGG | - | chr7_1:73849753-73849772 | Msa1037290:five_prime_UTR | 35.0% | |
| AAACGAAAGAGGATTGAGTT+AGG | - | chr7_1:73848368-73848387 | Msa1037290:three_prime_UTR | 35.0% | |
| AACGAAAGAGGATTGAGTTA+GGG | - | chr7_1:73848369-73848388 | Msa1037290:three_prime_UTR | 35.0% | |
| !! | ATTTCCGTCAAAGGTATCAA+AGG | - | chr7_1:73848647-73848666 | Msa1037290:three_prime_UTR | 35.0% |
| !! | GGTGTTATTGTTAATCCCAA+AGG | - | chr7_1:73848949-73848968 | Msa1037290:intron | 35.0% |
| AATCCCAAAGGAGAAATGAA+AGG | - | chr7_1:73848961-73848980 | Msa1037290:intron | 35.0% | |
| ATGATAATATCGACGTAGGT+GGG | - | chr7_1:73849037-73849056 | Msa1037290:intron | 35.0% | |
| ACTGCTGTGTCTTCAATAAT+TGG | - | chr7_1:73849152-73849171 | Msa1037290:intron | 35.0% | |
| TTAAAATTGGTTGGAGGATC+GGG | - | chr7_1:73849251-73849270 | Msa1037290:intron | 35.0% | |
| !! | GGTTTTGATGTTGTGCTTTT+AGG | - | chr7_1:73849307-73849326 | Msa1037290:intron | 35.0% |
| GTTTATTCTTGTGCAATCTG+TGG | - | chr7_1:73849616-73849635 | Msa1037290:intron | 35.0% | |
| ! | ATGGTGCATTGATATGCAAA+TGG | + | chr7_1:73849655-73849674 | None:intergenic | 35.0% |
| ! | ATCGATTCATCAAGGGAATT+TGG | - | chr7_1:73849752-73849771 | Msa1037290:five_prime_UTR | 35.0% |
| TCGATTCATCAAGGGAATTT+GGG | - | chr7_1:73849753-73849772 | Msa1037290:five_prime_UTR | 35.0% | |
| !! | TCATTTTGTTTCTCAGGTCG+CGG | - | chr7_1:73848527-73848546 | Msa1037290:three_prime_UTR | 40.0% |
| TAACAAGTTCAGGATGTCAC+TGG | - | chr7_1:73848562-73848581 | Msa1037290:three_prime_UTR | 40.0% | |
| AACAAGTTCAGGATGTCACT+GGG | - | chr7_1:73848563-73848582 | Msa1037290:three_prime_UTR | 40.0% | |
| !! | ATTCTTAGCTCCGGTGTTAT+CGG | + | chr7_1:73848618-73848637 | None:intergenic | 40.0% |
| GATGTAGAGATTCTTAGCTC+CGG | + | chr7_1:73848627-73848646 | None:intergenic | 40.0% | |
| CTCTACATCATTTCCGTCAA+AGG | - | chr7_1:73848638-73848657 | Msa1037290:three_prime_UTR | 40.0% | |
| CCTTCCTTTGATACCTTTGA+CGG | + | chr7_1:73848654-73848673 | None:intergenic | 40.0% | |
| ACATGAAAACACCGTCCTTT+CGG | + | chr7_1:73848799-73848818 | None:intergenic | 40.0% | |
| ! | GGTGTTTTCATGTACTTCGA+AGG | - | chr7_1:73848806-73848825 | Msa1037290:intron | 40.0% |
| TTGTATTGTGCAGACAATGC+TGG | - | chr7_1:73848928-73848947 | Msa1037290:intron | 40.0% | |
| CTACGTCGATATTATCATCG+TGG | + | chr7_1:73849035-73849054 | None:intergenic | 40.0% | |
| CACGATGATAATATCGACGT+AGG | - | chr7_1:73849033-73849052 | Msa1037290:intron | 40.0% | |
| GATGATAATATCGACGTAGG+TGG | - | chr7_1:73849036-73849055 | Msa1037290:intron | 40.0% | |
| TTGTTGTACTGCGAAGTCTT+TGG | - | chr7_1:73849558-73849577 | Msa1037290:CDS | 40.0% | |
| CATTGATATGCAAATGGCAC+AGG | + | chr7_1:73849649-73849668 | None:intergenic | 40.0% | |
| !! | TCATTTTGTTTCTCAGGTCG+CGG | - | chr7_1:73848527-73848546 | Msa1037290:three_prime_UTR | 40.0% |
| TAACAAGTTCAGGATGTCAC+TGG | - | chr7_1:73848562-73848581 | Msa1037290:three_prime_UTR | 40.0% | |
| AACAAGTTCAGGATGTCACT+GGG | - | chr7_1:73848563-73848582 | Msa1037290:three_prime_UTR | 40.0% | |
| !! | ATTCTTAGCTCCGGTGTTAT+CGG | + | chr7_1:73848618-73848637 | None:intergenic | 40.0% |
| GATGTAGAGATTCTTAGCTC+CGG | + | chr7_1:73848627-73848646 | None:intergenic | 40.0% | |
| CTCTACATCATTTCCGTCAA+AGG | - | chr7_1:73848638-73848657 | Msa1037290:three_prime_UTR | 40.0% | |
| CCTTCCTTTGATACCTTTGA+CGG | + | chr7_1:73848654-73848673 | None:intergenic | 40.0% | |
| ACATGAAAACACCGTCCTTT+CGG | + | chr7_1:73848799-73848818 | None:intergenic | 40.0% | |
| ! | GGTGTTTTCATGTACTTCGA+AGG | - | chr7_1:73848806-73848825 | Msa1037290:intron | 40.0% |
| TTGTATTGTGCAGACAATGC+TGG | - | chr7_1:73848928-73848947 | Msa1037290:intron | 40.0% | |
| CTACGTCGATATTATCATCG+TGG | + | chr7_1:73849035-73849054 | None:intergenic | 40.0% | |
| CACGATGATAATATCGACGT+AGG | - | chr7_1:73849033-73849052 | Msa1037290:intron | 40.0% | |
| GATGATAATATCGACGTAGG+TGG | - | chr7_1:73849036-73849055 | Msa1037290:intron | 40.0% | |
| TTGTTGTACTGCGAAGTCTT+TGG | - | chr7_1:73849558-73849577 | Msa1037290:CDS | 40.0% | |
| CATTGATATGCAAATGGCAC+AGG | + | chr7_1:73849649-73849668 | None:intergenic | 40.0% | |
| !! | CCGTCAAAGGTATCAAAGGA+AGG | - | chr7_1:73848651-73848670 | Msa1037290:three_prime_UTR | 45.0% |
| ATCAGGCTTACCCTTCTTCA+CGG | + | chr7_1:73848723-73848742 | None:intergenic | 45.0% | |
| TAAGCCTGATCTCCGTAAGA+AGG | - | chr7_1:73848733-73848752 | Msa1037290:CDS | 45.0% | |
| ATTGTAGGGTCTGCTATCAC+TGG | - | chr7_1:73849360-73849379 | Msa1037290:CDS | 45.0% | |
| TCTGCTATCACTGGTCCAAT+CGG | - | chr7_1:73849369-73849388 | Msa1037290:CDS | 45.0% | |
| TTAGCAGCACTTGCAATCCT+AGG | + | chr7_1:73849417-73849436 | None:intergenic | 45.0% | |
| !! | CCGTCAAAGGTATCAAAGGA+AGG | - | chr7_1:73848651-73848670 | Msa1037290:three_prime_UTR | 45.0% |
| ATCAGGCTTACCCTTCTTCA+CGG | + | chr7_1:73848723-73848742 | None:intergenic | 45.0% | |
| TAAGCCTGATCTCCGTAAGA+AGG | - | chr7_1:73848733-73848752 | Msa1037290:CDS | 45.0% | |
| ATTGTAGGGTCTGCTATCAC+TGG | - | chr7_1:73849360-73849379 | Msa1037290:CDS | 45.0% | |
| TCTGCTATCACTGGTCCAAT+CGG | - | chr7_1:73849369-73849388 | Msa1037290:CDS | 45.0% | |
| TTAGCAGCACTTGCAATCCT+AGG | + | chr7_1:73849417-73849436 | None:intergenic | 45.0% | |
| !! | TTTTGTTTCTCAGGTCGCGG+AGG | - | chr7_1:73848530-73848549 | Msa1037290:three_prime_UTR | 50.0% |
| !! | CATCCTGAACTTGTTACCCG+CGG | + | chr7_1:73848558-73848577 | None:intergenic | 50.0% |
| ! | GTGAATTGCGCCGATAACAC+CGG | - | chr7_1:73848605-73848624 | Msa1037290:three_prime_UTR | 50.0% |
| CAACGCAAGCAGAAGGCAAA+CGG | + | chr7_1:73848682-73848701 | None:intergenic | 50.0% | |
| ATGTCACCAACGCAAGCAGA+AGG | + | chr7_1:73848689-73848708 | None:intergenic | 50.0% | |
| !! | TTCTGCTTGCGTTGGTGACA+TGG | - | chr7_1:73848688-73848707 | Msa1037290:exon | 50.0% |
| !! | TTGCGTTGGTGACATGGTGA+TGG | - | chr7_1:73848694-73848713 | Msa1037290:exon | 50.0% |
| AGCACCTTCTTACGGAGATC+AGG | + | chr7_1:73848740-73848759 | None:intergenic | 50.0% | |
| TTTACGCTGGCGAACGATGA+CGG | + | chr7_1:73848768-73848787 | None:intergenic | 50.0% | |
| CTGCTATCACTGGTCCAATC+GGG | - | chr7_1:73849370-73849389 | Msa1037290:CDS | 50.0% | |
| TATCACTGGTCCAATCGGGA+AGG | - | chr7_1:73849374-73849393 | Msa1037290:CDS | 50.0% | |
| ! | GGAAGGAGTGTGCTGATCTA+TGG | - | chr7_1:73849391-73849410 | Msa1037290:CDS | 50.0% |
| ! | AGTGTGCTGATCTATGGCCT+AGG | - | chr7_1:73849397-73849416 | Msa1037290:CDS | 50.0% |
| !! | TTTTGTTTCTCAGGTCGCGG+AGG | - | chr7_1:73848530-73848549 | Msa1037290:three_prime_UTR | 50.0% |
| !! | CATCCTGAACTTGTTACCCG+CGG | + | chr7_1:73848558-73848577 | None:intergenic | 50.0% |
| ! | GTGAATTGCGCCGATAACAC+CGG | - | chr7_1:73848605-73848624 | Msa1037290:three_prime_UTR | 50.0% |
| CAACGCAAGCAGAAGGCAAA+CGG | + | chr7_1:73848682-73848701 | None:intergenic | 50.0% | |
| ATGTCACCAACGCAAGCAGA+AGG | + | chr7_1:73848689-73848708 | None:intergenic | 50.0% | |
| !! | TTCTGCTTGCGTTGGTGACA+TGG | - | chr7_1:73848688-73848707 | Msa1037290:exon | 50.0% |
| !! | TTGCGTTGGTGACATGGTGA+TGG | - | chr7_1:73848694-73848713 | Msa1037290:exon | 50.0% |
| AGCACCTTCTTACGGAGATC+AGG | + | chr7_1:73848740-73848759 | None:intergenic | 50.0% | |
| TTTACGCTGGCGAACGATGA+CGG | + | chr7_1:73848768-73848787 | None:intergenic | 50.0% | |
| CTGCTATCACTGGTCCAATC+GGG | - | chr7_1:73849370-73849389 | Msa1037290:CDS | 50.0% | |
| TATCACTGGTCCAATCGGGA+AGG | - | chr7_1:73849374-73849393 | Msa1037290:CDS | 50.0% | |
| ! | GGAAGGAGTGTGCTGATCTA+TGG | - | chr7_1:73849391-73849410 | Msa1037290:CDS | 50.0% |
| ! | AGTGTGCTGATCTATGGCCT+AGG | - | chr7_1:73849397-73849416 | Msa1037290:CDS | 50.0% |
| GCAGCAGCAATGTCGAAGAG+AGG | - | chr7_1:73848425-73848444 | Msa1037290:three_prime_UTR | 55.0% | |
| GATCCGCGGGTAACAAGTTC+AGG | - | chr7_1:73848552-73848571 | Msa1037290:three_prime_UTR | 55.0% | |
| GATGTCACTGGGTCTACCAG+TGG | - | chr7_1:73848574-73848593 | Msa1037290:three_prime_UTR | 55.0% | |
| CGTTTGCCTTCTGCTTGCGT+TGG | - | chr7_1:73848680-73848699 | Msa1037290:three_prime_UTR | 55.0% | |
| GTGATGGCCACCGTGAAGAA+GGG | - | chr7_1:73848710-73848729 | Msa1037290:CDS | 55.0% | |
| AGGCTTACCCTTCTTCACGG+TGG | + | chr7_1:73848720-73848739 | None:intergenic | 55.0% | |
| !! | CGGCAGGAAGCACCTTCTTA+CGG | + | chr7_1:73848748-73848767 | None:intergenic | 55.0% |
| TCGTTCGCCAGCGTAAACCA+TGG | - | chr7_1:73848771-73848790 | Msa1037290:intron | 55.0% | |
| ! | AAACCATGGCGCCGAAAGGA+CGG | - | chr7_1:73848785-73848804 | Msa1037290:intron | 55.0% |
| TCAGCACACTCCTTCCCGAT+TGG | + | chr7_1:73849387-73849406 | None:intergenic | 55.0% | |
| GCAGCAGCAATGTCGAAGAG+AGG | - | chr7_1:73848425-73848444 | Msa1037290:three_prime_UTR | 55.0% | |
| GATCCGCGGGTAACAAGTTC+AGG | - | chr7_1:73848552-73848571 | Msa1037290:three_prime_UTR | 55.0% | |
| GATGTCACTGGGTCTACCAG+TGG | - | chr7_1:73848574-73848593 | Msa1037290:three_prime_UTR | 55.0% | |
| CGTTTGCCTTCTGCTTGCGT+TGG | - | chr7_1:73848680-73848699 | Msa1037290:three_prime_UTR | 55.0% | |
| GTGATGGCCACCGTGAAGAA+GGG | - | chr7_1:73848710-73848729 | Msa1037290:CDS | 55.0% | |
| AGGCTTACCCTTCTTCACGG+TGG | + | chr7_1:73848720-73848739 | None:intergenic | 55.0% | |
| !! | CGGCAGGAAGCACCTTCTTA+CGG | + | chr7_1:73848748-73848767 | None:intergenic | 55.0% |
| TCGTTCGCCAGCGTAAACCA+TGG | - | chr7_1:73848771-73848790 | Msa1037290:intron | 55.0% | |
| ! | AAACCATGGCGCCGAAAGGA+CGG | - | chr7_1:73848785-73848804 | Msa1037290:intron | 55.0% |
| TCAGCACACTCCTTCCCGAT+TGG | + | chr7_1:73849387-73849406 | None:intergenic | 55.0% | |
| GTCACTGGGTCTACCAGTGG+CGG | - | chr7_1:73848577-73848596 | Msa1037290:three_prime_UTR | 60.0% | |
| ! | GGTGATGGCCACCGTGAAGA+AGG | - | chr7_1:73848709-73848728 | Msa1037290:CDS | 60.0% |
| TTCGGCGCCATGGTTTACGC+TGG | + | chr7_1:73848781-73848800 | None:intergenic | 60.0% | |
| ! | GCGTAAACCATGGCGCCGAA+AGG | - | chr7_1:73848781-73848800 | Msa1037290:intron | 60.0% |
| GTCACTGGGTCTACCAGTGG+CGG | - | chr7_1:73848577-73848596 | Msa1037290:three_prime_UTR | 60.0% | |
| ! | GGTGATGGCCACCGTGAAGA+AGG | - | chr7_1:73848709-73848728 | Msa1037290:CDS | 60.0% |
| TTCGGCGCCATGGTTTACGC+TGG | + | chr7_1:73848781-73848800 | None:intergenic | 60.0% | |
| ! | GCGTAAACCATGGCGCCGAA+AGG | - | chr7_1:73848781-73848800 | Msa1037290:intron | 60.0% |
| CAATTCACCGTCGCCGCCAC+TGG | + | chr7_1:73848593-73848612 | None:intergenic | 65.0% | |
| ACACCGTCCTTTCGGCGCCA+TGG | + | chr7_1:73848791-73848810 | None:intergenic | 65.0% | |
| CAATTCACCGTCGCCGCCAC+TGG | + | chr7_1:73848593-73848612 | None:intergenic | 65.0% | |
| ACACCGTCCTTTCGGCGCCA+TGG | + | chr7_1:73848791-73848810 | None:intergenic | 65.0% | |
| CTCAGGTCGCGGAGGATCCG+CGG | - | chr7_1:73848538-73848557 | Msa1037290:three_prime_UTR | 70.0% | |
| TCAGGTCGCGGAGGATCCGC+GGG | - | chr7_1:73848539-73848558 | Msa1037290:three_prime_UTR | 70.0% | |
| GGGTCTACCAGTGGCGGCGA+CGG | - | chr7_1:73848583-73848602 | Msa1037290:three_prime_UTR | 70.0% | |
| ! | CGCTGGCGAACGATGACGGC+AGG | + | chr7_1:73848764-73848783 | None:intergenic | 70.0% |
| CTCAGGTCGCGGAGGATCCG+CGG | - | chr7_1:73848538-73848557 | Msa1037290:three_prime_UTR | 70.0% | |
| TCAGGTCGCGGAGGATCCGC+GGG | - | chr7_1:73848539-73848558 | Msa1037290:three_prime_UTR | 70.0% | |
| GGGTCTACCAGTGGCGGCGA+CGG | - | chr7_1:73848583-73848602 | Msa1037290:three_prime_UTR | 70.0% | |
| ! | CGCTGGCGAACGATGACGGC+AGG | + | chr7_1:73848764-73848783 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73848368 | 73849786 | 73848368 | ID=Msa1037290;Name=Msa1037290 |
| chr7_1 | mRNA | 73848368 | 73849786 | 73848368 | ID=Msa1037290-mRNA-1;Parent=Msa1037290;Name=Msa1037290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=66|1|1|1|1|1|4|337|140 |
| chr7_1 | exon | 73848368 | 73848787 | 73848368 | ID=Msa1037290-mRNA-1:exon:18339;Parent=Msa1037290-mRNA-1 |
| chr7_1 | exon | 73849172 | 73849213 | 73849172 | ID=Msa1037290-mRNA-1:exon:18338;Parent=Msa1037290-mRNA-1 |
| chr7_1 | exon | 73849327 | 73849611 | 73849327 | ID=Msa1037290-mRNA-1:exon:18337;Parent=Msa1037290-mRNA-1 |
| chr7_1 | exon | 73849708 | 73849786 | 73849708 | ID=Msa1037290-mRNA-1:exon:18336;Parent=Msa1037290-mRNA-1 |
| chr7_1 | five_prime_UTR | 73849721 | 73849786 | 73849721 | ID=Msa1037290-mRNA-1:five_prime_utr;Parent=Msa1037290-mRNA-1 |
| chr7_1 | CDS | 73849708 | 73849720 | 73849708 | ID=Msa1037290-mRNA-1:cds;Parent=Msa1037290-mRNA-1 |
| chr7_1 | CDS | 73849327 | 73849611 | 73849327 | ID=Msa1037290-mRNA-1:cds;Parent=Msa1037290-mRNA-1 |
| chr7_1 | CDS | 73849172 | 73849213 | 73849172 | ID=Msa1037290-mRNA-1:cds;Parent=Msa1037290-mRNA-1 |
| chr7_1 | CDS | 73848705 | 73848787 | 73848705 | ID=Msa1037290-mRNA-1:cds;Parent=Msa1037290-mRNA-1 |
| chr7_1 | three_prime_UTR | 73848368 | 73848704 | 73848368 | ID=Msa1037290-mRNA-1:three_prime_utr;Parent=Msa1037290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
