Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164150 | KAF5465863.1 | 100.000 | 140 | 0 | 0 | 1 | 140 | 17 | 156 | 8.35e-96 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164150 | sp|P49690|RL23_ARATH | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.70e-97 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164150 | A0A833XG65 | 100.000 | 140 | 0 | 0 | 1 | 140 | 17 | 156 | 3.99e-96 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1164150 | 0.846049 | 2.772077e-59 | -8.615850e-47 |
| Msa0003330 | Msa1164150 | 0.846390 | 2.237959e-59 | -8.615850e-47 |
| Msa0027590 | Msa1164150 | 0.891199 | 4.938057e-74 | -8.615850e-47 |
| Msa0032780 | Msa1164150 | 0.826932 | 2.068136e-54 | -8.615850e-47 |
| Msa0040220 | Msa1164150 | 0.831907 | 1.279399e-55 | -8.615850e-47 |
| Msa0042480 | Msa1164150 | 0.844475 | 7.390103e-59 | -8.615850e-47 |
| Msa0072570 | Msa1164150 | 0.830825 | 2.361450e-55 | -8.615850e-47 |
| Msa0075350 | Msa1164150 | 0.882518 | 9.742305e-71 | -8.615850e-47 |
| Msa0079590 | Msa1164150 | 0.854781 | 9.793607e-62 | -8.615850e-47 |
| Msa0087910 | Msa1164150 | 0.859999 | 2.803961e-63 | -8.615850e-47 |
| Msa0100420 | Msa1164150 | 0.823244 | 1.537442e-53 | -8.615850e-47 |
| Msa0114570 | Msa1164150 | 0.846821 | 1.706956e-59 | -8.615850e-47 |
| Msa0114600 | Msa1164150 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
| Msa0602900 | Msa1164150 | 0.803059 | 4.176781e-49 | -8.615850e-47 |
| Msa0604960 | Msa1164150 | 0.811409 | 7.103477e-51 | -8.615850e-47 |
| Msa0605890 | Msa1164150 | 0.871977 | 4.526946e-67 | -8.615850e-47 |
| Msa0617540 | Msa1164150 | 0.807830 | 4.173891e-50 | -8.615850e-47 |
| Msa0619230 | Msa1164150 | 0.815291 | 9.969497e-52 | -8.615850e-47 |
| Msa0622230 | Msa1164150 | 0.853917 | 1.740325e-61 | -8.615850e-47 |
| Msa0643960 | Msa1164150 | 0.804911 | 1.720602e-49 | -8.615850e-47 |
| Msa0649890 | Msa1164150 | 0.845870 | 3.100424e-59 | -8.615850e-47 |
| Msa0653060 | Msa1164150 | 0.821359 | 4.211504e-53 | -8.615850e-47 |
| Msa0681220 | Msa1164150 | 0.835594 | 1.532016e-56 | -8.615850e-47 |
| Msa0686550 | Msa1164150 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
| Msa0694400 | Msa1164150 | 0.846025 | 2.813933e-59 | -8.615850e-47 |
| Msa0704860 | Msa1164150 | 0.837196 | 5.993759e-57 | -8.615850e-47 |
| Msa0705800 | Msa1164150 | 0.895723 | 7.306102e-76 | -8.615850e-47 |
| Msa0711960 | Msa1164150 | 0.809078 | 2.260550e-50 | -8.615850e-47 |
| Msa0712610 | Msa1164150 | 0.875305 | 3.421758e-68 | -8.615850e-47 |
| Msa0717380 | Msa1164150 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa0748350 | Msa1164150 | 0.847064 | 1.464471e-59 | -8.615850e-47 |
| Msa0749000 | Msa1164150 | 0.813332 | 2.700448e-51 | -8.615850e-47 |
| Msa0752910 | Msa1164150 | 0.892784 | 1.153561e-74 | -8.615850e-47 |
| Msa0758420 | Msa1164150 | 0.839881 | 1.214920e-57 | -8.615850e-47 |
| Msa0776890 | Msa1164150 | 0.829871 | 4.038183e-55 | -8.615850e-47 |
| Msa0781080 | Msa1164150 | 0.850841 | 1.307874e-60 | -8.615850e-47 |
| Msa0786660 | Msa1164150 | 0.823027 | 1.727213e-53 | -8.615850e-47 |
| Msa0788380 | Msa1164150 | 0.905764 | 3.041144e-80 | -8.615850e-47 |
| Msa0792420 | Msa1164150 | 0.824871 | 6.380958e-54 | -8.615850e-47 |
| Msa0796490 | Msa1164150 | 0.810017 | 1.420470e-50 | -8.615850e-47 |
| Msa0799830 | Msa1164150 | 0.828646 | 8.008666e-55 | -8.615850e-47 |
| Msa0822580 | Msa1164150 | 0.911207 | 7.894852e-83 | -8.615850e-47 |
| Msa0827380 | Msa1164150 | 0.811830 | 5.754527e-51 | -8.615850e-47 |
| Msa0838070 | Msa1164150 | 0.877195 | 7.632043e-69 | -8.615850e-47 |
| Msa0128330 | Msa1164150 | 0.871472 | 6.657157e-67 | -8.615850e-47 |
| Msa0128750 | Msa1164150 | 0.867277 | 1.540629e-65 | -8.615850e-47 |
| Msa0134580 | Msa1164150 | 0.862676 | 4.280014e-64 | -8.615850e-47 |
| Msa0138890 | Msa1164150 | 0.839582 | 1.453980e-57 | -8.615850e-47 |
| Msa0146610 | Msa1164150 | 0.827667 | 1.378292e-54 | -8.615850e-47 |
| Msa0167860 | Msa1164150 | 0.864435 | 1.218936e-64 | -8.615850e-47 |
| Msa0168320 | Msa1164150 | 0.823646 | 1.238421e-53 | -8.615850e-47 |
| Msa0172930 | Msa1164150 | 0.826278 | 2.961448e-54 | -8.615850e-47 |
| Msa0174580 | Msa1164150 | 0.876947 | 9.306218e-69 | -8.615850e-47 |
| Msa0175000 | Msa1164150 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
| Msa0182050 | Msa1164150 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0191450 | Msa1164150 | 0.927302 | 1.420920e-91 | -8.615850e-47 |
| Msa0191550 | Msa1164150 | 0.927014 | 2.116777e-91 | -8.615850e-47 |
| Msa0192750 | Msa1164150 | 0.852598 | 4.155529e-61 | -8.615850e-47 |
| Msa0194940 | Msa1164150 | 0.903980 | 1.977462e-79 | -8.615850e-47 |
| Msa0210330 | Msa1164150 | 0.818839 | 1.589381e-52 | -8.615850e-47 |
| Msa0210360 | Msa1164150 | 0.872328 | 3.461597e-67 | -8.615850e-47 |
| Msa0222730 | Msa1164150 | 0.823941 | 1.056366e-53 | -8.615850e-47 |
| Msa0229150 | Msa1164150 | 0.817017 | 4.100410e-52 | -8.615850e-47 |
| Msa0233550 | Msa1164150 | 0.815286 | 9.995236e-52 | -8.615850e-47 |
| Msa0235050 | Msa1164150 | 0.871844 | 5.013567e-67 | -8.615850e-47 |
| Msa0369410 | Msa1164150 | 0.849222 | 3.714969e-60 | -8.615850e-47 |
| Msa0376830 | Msa1164150 | 0.815545 | 8.751413e-52 | -8.615850e-47 |
| Msa0376890 | Msa1164150 | 0.815317 | 9.835437e-52 | -8.615850e-47 |
| Msa0377520 | Msa1164150 | 0.804697 | 1.907232e-49 | -8.615850e-47 |
| Msa0419710 | Msa1164150 | 0.808987 | 2.363904e-50 | -8.615850e-47 |
| Msa0426090 | Msa1164150 | 0.867960 | 9.308641e-66 | -8.615850e-47 |
| Msa0426250 | Msa1164150 | 0.867870 | 9.945331e-66 | -8.615850e-47 |
| Msa0436750 | Msa1164150 | 0.834444 | 2.986180e-56 | -8.615850e-47 |
| Msa0438960 | Msa1164150 | 0.827400 | 1.597728e-54 | -8.615850e-47 |
| Msa0463520 | Msa1164150 | 0.826201 | 3.088785e-54 | -8.615850e-47 |
| Msa0471880 | Msa1164150 | 0.837318 | 5.577471e-57 | -8.615850e-47 |
| Msa0472480 | Msa1164150 | 0.861632 | 8.949424e-64 | -8.615850e-47 |
| Msa0473570 | Msa1164150 | 0.815758 | 7.846239e-52 | -8.615850e-47 |
| Msa0475810 | Msa1164150 | 0.814828 | 1.262623e-51 | -8.615850e-47 |
| Msa0481520 | Msa1164150 | 0.899913 | 1.236299e-77 | -8.615850e-47 |
| Msa0481800 | Msa1164150 | 0.810022 | 1.416925e-50 | -8.615850e-47 |
| Msa0481850 | Msa1164150 | 0.883200 | 5.484376e-71 | -8.615850e-47 |
| Msa1037290 | Msa1164150 | 0.987621 | 6.359484e-171 | -8.615850e-47 |
| Msa1040160 | Msa1164150 | 0.868163 | 8.010383e-66 | -8.615850e-47 |
| Msa1041680 | Msa1164150 | 0.896251 | 4.413336e-76 | -8.615850e-47 |
| Msa1042100 | Msa1164150 | 0.853341 | 2.547274e-61 | -8.615850e-47 |
| Msa1054280 | Msa1164150 | 0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa1078870 | Msa1164150 | 0.873737 | 1.166068e-67 | -8.615850e-47 |
| Msa1078980 | Msa1164150 | 0.875654 | 2.598966e-68 | -8.615850e-47 |
| Msa1080350 | Msa1164150 | 0.865773 | 4.628829e-65 | -8.615850e-47 |
| Msa1082170 | Msa1164150 | 0.895406 | 9.880654e-76 | -8.615850e-47 |
| Msa1083370 | Msa1164150 | 0.853291 | 2.633437e-61 | -8.615850e-47 |
| Msa1096900 | Msa1164150 | 0.842060 | 3.255511e-58 | -8.615850e-47 |
| Msa0239420 | Msa1164150 | 0.819245 | 1.284995e-52 | -8.615850e-47 |
| Msa0277600 | Msa1164150 | 0.840466 | 8.550592e-58 | -8.615850e-47 |
| Msa0281330 | Msa1164150 | 0.809401 | 1.926753e-50 | -8.615850e-47 |
| Msa0281370 | Msa1164150 | 0.842579 | 2.372108e-58 | -8.615850e-47 |
| Msa0297830 | Msa1164150 | 0.866414 | 2.900736e-65 | -8.615850e-47 |
| Msa0301220 | Msa1164150 | 0.848465 | 6.025870e-60 | -8.615850e-47 |
| Msa0301250 | Msa1164150 | 0.802702 | 4.948469e-49 | -8.615850e-47 |
| Msa0312210 | Msa1164150 | 0.815076 | 1.112334e-51 | -8.615850e-47 |
| Msa0313060 | Msa1164150 | 0.826803 | 2.219601e-54 | -8.615850e-47 |
| Msa0313520 | Msa1164150 | 0.838422 | 2.903587e-57 | -8.615850e-47 |
| Msa0315430 | Msa1164150 | 0.872234 | 3.718164e-67 | -8.615850e-47 |
| Msa0334030 | Msa1164150 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa0335840 | Msa1164150 | 0.878311 | 3.111301e-69 | -8.615850e-47 |
| Msa1125860 | Msa1164150 | 0.857758 | 1.312028e-62 | -8.615850e-47 |
| Msa1125900 | Msa1164150 | 0.803658 | 3.138036e-49 | -8.615850e-47 |
| Msa1126060 | Msa1164150 | 0.859136 | 5.095537e-63 | -8.615850e-47 |
| Msa1126520 | Msa1164150 | 0.929366 | 7.706647e-93 | -8.615850e-47 |
| Msa1147670 | Msa1164150 | 0.815590 | 8.550327e-52 | -8.615850e-47 |
| Msa1164150 | Msa1165640 | 0.858951 | 5.789430e-63 | -8.615850e-47 |
| Msa1164150 | Msa1166570 | 0.900310 | 8.324160e-78 | -8.615850e-47 |
| Msa1164150 | Msa1167540 | 0.831805 | 1.355770e-55 | -8.615850e-47 |
| Msa1164150 | Msa1169180 | 0.876978 | 9.084268e-69 | -8.615850e-47 |
| Msa1164150 | Msa1180000 | 0.865937 | 4.108976e-65 | -8.615850e-47 |
| Msa1164150 | Msa1186030 | 0.870721 | 1.178490e-66 | -8.615850e-47 |
| Msa1164150 | Msa1203560 | 0.801078 | 1.066997e-48 | -8.615850e-47 |
| Msa1164150 | Msa1206240 | 0.815406 | 9.395245e-52 | -8.615850e-47 |
| Msa1164150 | Msa1208330 | 0.832973 | 6.961255e-56 | -8.615850e-47 |
| Msa1164150 | Msa1218170 | 0.854733 | 1.011151e-61 | -8.615850e-47 |
| Msa1164150 | Msa1240270 | 0.879297 | 1.397476e-69 | -8.615850e-47 |
| Msa1164150 | Msa1256840 | 0.851640 | 7.781448e-61 | -8.615850e-47 |
| Msa1164150 | Msa1258540 | 0.858555 | 7.599882e-63 | -8.615850e-47 |
| Msa1164150 | Msa1270640 | 0.869373 | 3.250990e-66 | -8.615850e-47 |
| Msa1164150 | Msa1270710 | 0.865557 | 5.417750e-65 | -8.615850e-47 |
| Msa1164150 | Msa1295150 | 0.863539 | 2.316027e-64 | -8.615850e-47 |
| Msa1164150 | Msa1295170 | 0.811648 | 6.301882e-51 | -8.615850e-47 |
| Msa1164150 | Msa1301640 | 0.825042 | 5.816890e-54 | -8.615850e-47 |
| Msa1164150 | Msa1311400 | 0.917251 | 6.664029e-86 | -8.615850e-47 |
| Msa1164150 | Msa1321790 | 0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa1164150 | Msa1330730 | 0.819566 | 1.085646e-52 | -8.615850e-47 |
| Msa1164150 | Msa1332250 | 0.856281 | 3.577497e-62 | -8.615850e-47 |
| Msa1164150 | Msa1351020 | 0.862917 | 3.607972e-64 | -8.615850e-47 |
| Msa1164150 | Msa1356790 | 0.871144 | 8.549070e-67 | -8.615850e-47 |
| Msa1164150 | Msa1362210 | 0.830301 | 3.172522e-55 | -8.615850e-47 |
| Msa1164150 | Msa1362790 | 0.828429 | 9.034046e-55 | -8.615850e-47 |
| Msa1164150 | Msa1363910 | 0.811273 | 7.603196e-51 | -8.615850e-47 |
| Msa1164150 | Msa1368920 | 0.988112 | 9.294457e-173 | -8.615850e-47 |
| Msa1164150 | Msa1374240 | 0.854332 | 1.320443e-61 | -8.615850e-47 |
| Msa1164150 | Msa1374480 | 0.833546 | 5.011014e-56 | -8.615850e-47 |
| Msa1164150 | Msa1385480 | 0.825578 | 4.343330e-54 | -8.615850e-47 |
| Msa1164150 | Msa1390760 | 0.811321 | 7.423529e-51 | -8.615850e-47 |
| Msa1164150 | Msa1392590 | 0.857969 | 1.136375e-62 | -8.615850e-47 |
| Msa1164150 | Msa1397100 | 0.835492 | 1.625829e-56 | -8.615850e-47 |
| Msa1164150 | Msa1397660 | 0.812992 | 3.206700e-51 | -8.615850e-47 |
| Msa1164150 | Msa1403910 | 0.840150 | 1.034177e-57 | -8.615850e-47 |
| Msa1164150 | Msa1406080 | 0.823540 | 1.311069e-53 | -8.615850e-47 |
| Msa1164150 | Msa1418770 | 0.856193 | 3.796839e-62 | -8.615850e-47 |
| Msa1164150 | Msa1426120 | 0.869382 | 3.229599e-66 | -8.615850e-47 |
| Msa1164150 | Msa1432310 | 0.840708 | 7.390799e-58 | -8.615850e-47 |
| Msa1164150 | Msa1437280 | 0.801494 | 8.767212e-49 | -8.615850e-47 |
| Msa1164150 | Msa1446410 | 0.884677 | 1.563773e-71 | -8.615850e-47 |
| Msa1164150 | Msa1449160 | 0.847577 | 1.059196e-59 | -8.615850e-47 |
| Msa1164150 | Msa1463570 | 0.874169 | 8.331791e-68 | -8.615850e-47 |
| Msa0484730 | Msa1164150 | 0.830864 | 2.309967e-55 | -8.615850e-47 |
| Msa0517480 | Msa1164150 | 0.822381 | 2.441728e-53 | -8.615850e-47 |
| Msa0529900 | Msa1164150 | 0.872226 | 3.743386e-67 | -8.615850e-47 |
| Msa0547920 | Msa1164150 | 0.819085 | 1.397366e-52 | -8.615850e-47 |
| Msa0550420 | Msa1164150 | 0.827496 | 1.515156e-54 | -8.615850e-47 |
| Msa0573550 | Msa1164150 | 0.890275 | 1.141626e-73 | -8.615850e-47 |
| Msa0579830 | Msa1164150 | 0.855298 | 6.927426e-62 | -8.615850e-47 |
| Msa0582070 | Msa1164150 | 0.847782 | 9.299938e-60 | -8.615850e-47 |
| Msa0584030 | Msa1164150 | 0.848783 | 4.917339e-60 | -8.615850e-47 |
| Msa0596370 | Msa1164150 | 0.810122 | 1.348690e-50 | -8.615850e-47 |
| Msa0597240 | Msa1164150 | 0.830429 | 2.951245e-55 | -8.615850e-47 |
| Msa0861320 | Msa1164150 | 0.858963 | 5.739400e-63 | -8.615850e-47 |
| Msa0915540 | Msa1164150 | 0.853400 | 2.449589e-61 | -8.615850e-47 |
| Msa0929700 | Msa1164150 | 0.866110 | 3.623567e-65 | -8.615850e-47 |
| Msa0966670 | Msa1164150 | 0.860618 | 1.821261e-63 | -8.615850e-47 |
| Msa0978470 | Msa1164150 | 0.808443 | 3.089630e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164150 | MtrunA17_Chr7g0261941 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.11e-98 | 278 |
| Msa1164150 | MtrunA17_Chr1g0183341 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.11e-98 | 278 |
| Msa1164150 | MtrunA17_Chr1g0157171 | 83.471 | 121 | 6 | 1 | 16 | 136 | 1 | 107 | 2.28e-66 | 197 |
| Msa1164150 | MtrunA17_Chr3g0079201 | 86.076 | 79 | 11 | 0 | 62 | 140 | 1 | 79 | 5.98e-45 | 141 |
| Msa1164150 | MtrunA17_Chr5g0422671 | 86.567 | 67 | 9 | 0 | 74 | 140 | 2 | 68 | 8.91e-38 | 123 |
| Msa1164150 | MtrunA17_Chr3g0092871 | 89.796 | 49 | 5 | 0 | 14 | 62 | 16 | 64 | 1.21e-24 | 90.1 |
| Msa1164150 | MtrunA17_Chr5g0422681 | 81.633 | 49 | 9 | 0 | 14 | 62 | 16 | 64 | 8.46e-21 | 80.1 |
| Msa1164150 | MtrunA17_Chr4g0015931 | 36.522 | 115 | 65 | 3 | 26 | 136 | 8 | 118 | 3.90e-16 | 69.7 |
| Msa1164150 | MtrunA17_CPg0492591 | 36.522 | 115 | 65 | 3 | 26 | 136 | 8 | 118 | 3.90e-16 | 69.7 |
| Msa1164150 | MtrunA17_Chr2g0322131 | 37.255 | 102 | 57 | 2 | 26 | 124 | 8 | 105 | 4.36e-15 | 67.0 |
| Msa1164150 | MtrunA17_Chr4g0017131 | 37.500 | 88 | 48 | 2 | 26 | 110 | 8 | 91 | 3.01e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164150 | AT2G33370.1 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.73e-98 | 279 |
| Msa1164150 | AT1G04480.1 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.73e-98 | 279 |
| Msa1164150 | AT3G04400.1 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 1.73e-98 | 279 |
| Msa1164150 | AT2G33370.2 | 100.000 | 125 | 0 | 0 | 16 | 140 | 1 | 125 | 4.84e-88 | 252 |
| Msa1164150 | AT3G04400.2 | 100.000 | 125 | 0 | 0 | 16 | 140 | 1 | 125 | 4.84e-88 | 252 |
| Msa1164150 | ATCG00780.1 | 34.783 | 115 | 67 | 3 | 26 | 136 | 8 | 118 | 5.12e-15 | 67.0 |
Find 65 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGATTCATCAAGGGAATT+TGG | 0.133338 | 7_4:+55700859 | Msa1164150:three_prime_UTR |
| TTTACCTTTCATTTCTCCTT+TGG | 0.232028 | 7_4:-55700072 | None:intergenic |
| TTACCTTTCATTTCTCCTTT+GGG | 0.290146 | 7_4:-55700071 | None:intergenic |
| TCGATTCATCAAGGGAATTT+GGG | 0.335431 | 7_4:+55700860 | Msa1164150:three_prime_UTR |
| ATTCTTAGCTCCGGTGTTAT+CGG | 0.357276 | 7_4:-55699722 | None:intergenic |
| AAACGAAAGAGGATTGAGTT+AGG | 0.365890 | 7_4:+55699475 | Msa1164150:five_prime_UTR |
| AAATACATTCAACCTAAAAC+TGG | 0.367714 | 7_4:-55700607 | None:intergenic |
| ACATGAAAACACCGTCCTTT+CGG | 0.371684 | 7_4:-55699903 | None:intergenic |
| GATCCGCGGGTAACAAGTTC+AGG | 0.386005 | 7_4:+55699659 | Msa1164150:CDS |
| GGAAGGAGTGTGCTGATCTA+TGG | 0.394494 | 7_4:+55700498 | Msa1164150:CDS |
| CCTTCCTTTGATACCTTTGA+CGG | 0.396996 | 7_4:-55699758 | None:intergenic |
| TAATTGTGATCAACAATGAT+TGG | 0.401689 | 7_4:+55700828 | Msa1164150:three_prime_UTR |
| AACGAAAGAGGATTGAGTTA+GGG | 0.418095 | 7_4:+55699476 | Msa1164150:five_prime_UTR |
| AGCACCTTCTTACGGAGATC+AGG | 0.422915 | 7_4:-55699844 | None:intergenic |
| TTCTGCTTGCGTTGGTGACA+TGG | 0.443666 | 7_4:+55699795 | Msa1164150:CDS |
| TTGTTGTACTGCGAAGTCTT+TGG | 0.454371 | 7_4:+55700665 | Msa1164150:three_prime_UTR |
| CAATTCACCGTCGCCGCCAC+TGG | 0.459295 | 7_4:-55699697 | None:intergenic |
| TTAGCAGCACTTGCAATCCT+AGG | 0.471348 | 7_4:-55700521 | None:intergenic |
| CTCTACATCATTTCCGTCAA+AGG | 0.478393 | 7_4:+55699745 | Msa1164150:CDS |
| GGTGATGGCCACCGTGAAGA+AGG | 0.480460 | 7_4:+55699816 | Msa1164150:CDS |
| CGTTTGCCTTCTGCTTGCGT+TGG | 0.482632 | 7_4:+55699787 | Msa1164150:CDS |
| TCTGCTATCACTGGTCCAAT+CGG | 0.485775 | 7_4:+55700476 | Msa1164150:CDS |
| TAACAAGTTCAGGATGTCAC+TGG | 0.500497 | 7_4:+55699669 | Msa1164150:CDS |
| CGGCAGGAAGCACCTTCTTA+CGG | 0.502055 | 7_4:-55699852 | None:intergenic |
| ATCAGGCTTACCCTTCTTCA+CGG | 0.504036 | 7_4:-55699827 | None:intergenic |
| CTCAGGTCGCGGAGGATCCG+CGG | 0.504873 | 7_4:+55699645 | Msa1164150:intron |
| GATGAATATATAAACGAAAG+AGG | 0.505172 | 7_4:+55699464 | None:intergenic |
| CTGCTATCACTGGTCCAATC+GGG | 0.511052 | 7_4:+55700477 | Msa1164150:CDS |
| ACAAACAACTCTTTAGAACT+AGG | 0.529116 | 7_4:-55700700 | None:intergenic |
| TTGTATTGTGCAGACAATGC+TGG | 0.531818 | 7_4:+55700035 | Msa1164150:intron |
| ATTGTAGGGTCTGCTATCAC+TGG | 0.534637 | 7_4:+55700467 | Msa1164150:intron |
| CAACGCAAGCAGAAGGCAAA+CGG | 0.538758 | 7_4:-55699786 | None:intergenic |
| TCAGCACACTCCTTCCCGAT+TGG | 0.539409 | 7_4:-55700491 | None:intergenic |
| CGCTGGCGAACGATGACGGC+AGG | 0.540043 | 7_4:-55699868 | None:intergenic |
| CGTTGATATGCAAATGGCAC+AGG | 0.543383 | 7_4:-55700753 | None:intergenic |
| ACACCGTCCTTTCGGCGCCA+TGG | 0.550488 | 7_4:-55699895 | None:intergenic |
| CCGTCAAAGGTATCAAAGGA+AGG | 0.551618 | 7_4:+55699758 | Msa1164150:CDS |
| TCAGGTCGCGGAGGATCCGC+GGG | 0.560803 | 7_4:+55699646 | Msa1164150:intron |
| AGTGTGCTGATCTATGGCCT+AGG | 0.561029 | 7_4:+55700504 | Msa1164150:CDS |
| TTCGGCGCCATGGTTTACGC+TGG | 0.563205 | 7_4:-55699885 | None:intergenic |
| TCTCAAGATCAAATAACTGA+TGG | 0.564644 | 7_4:-55700778 | None:intergenic |
| GGTGTTATTGTTAATCCCAA+AGG | 0.565013 | 7_4:+55700056 | Msa1164150:CDS |
| TAAGCCTGATCTCCGTAAGA+AGG | 0.569085 | 7_4:+55699840 | Msa1164150:CDS |
| ATTTCCGTCAAAGGTATCAA+AGG | 0.575410 | 7_4:+55699754 | Msa1164150:CDS |
| GGGTCTACCAGTGGCGGCGA+CGG | 0.576990 | 7_4:+55699690 | Msa1164150:CDS |
| TTTGCTAATCGATTCATCAA+GGG | 0.578271 | 7_4:+55700852 | Msa1164150:three_prime_UTR |
| GTGATGGCCACCGTGAAGAA+GGG | 0.579374 | 7_4:+55699817 | Msa1164150:CDS |
| ATGGTGCGTTGATATGCAAA+TGG | 0.585431 | 7_4:-55700759 | None:intergenic |
| TTGCGTTGGTGACATGGTGA+TGG | 0.588839 | 7_4:+55699801 | Msa1164150:CDS |
| GATGTAGAGATTCTTAGCTC+CGG | 0.596136 | 7_4:-55699731 | None:intergenic |
| TTTACGCTGGCGAACGATGA+CGG | 0.598744 | 7_4:-55699872 | None:intergenic |
| AAACCATGGCGCCGAAAGGA+CGG | 0.604162 | 7_4:+55699892 | Msa1164150:CDS |
| GCGTAAACCATGGCGCCGAA+AGG | 0.604166 | 7_4:+55699888 | Msa1164150:CDS |
| AACAAGTTCAGGATGTCACT+GGG | 0.607031 | 7_4:+55699670 | Msa1164150:CDS |
| ATGTCACCAACGCAAGCAGA+AGG | 0.609870 | 7_4:-55699793 | None:intergenic |
| GTCACTGGGTCTACCAGTGG+CGG | 0.621290 | 7_4:+55699684 | Msa1164150:CDS |
| GTGAATTGCGCCGATAACAC+CGG | 0.624326 | 7_4:+55699712 | Msa1164150:CDS |
| AATCCCAAAGGAGAAATGAA+AGG | 0.624552 | 7_4:+55700068 | Msa1164150:CDS |
| TCGTTCGCCAGCGTAAACCA+TGG | 0.647146 | 7_4:+55699878 | Msa1164150:CDS |
| GCAGCAGCAATGTCGAAGAG+AGG | 0.651240 | 7_4:+55699532 | Msa1164150:exon |
| GATGTCACTGGGTCTACCAG+TGG | 0.653286 | 7_4:+55699681 | Msa1164150:CDS |
| GTTTATTCTTGTGCAATCTG+CGG | 0.660299 | 7_4:+55700723 | Msa1164150:three_prime_UTR |
| TATCACTGGTCCAATCGGGA+AGG | 0.675150 | 7_4:+55700481 | Msa1164150:CDS |
| CATCCTGAACTTGTTACCCG+CGG | 0.683379 | 7_4:-55699662 | None:intergenic |
| AGGCTTACCCTTCTTCACGG+TGG | 0.718796 | 7_4:-55699824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATCAGTATTAAAAT+TGG | + | chr7_4:55700345-55700364 | Msa1164150:intron | 10.0% |
| !! | TTAATAATCAGTATTAAAAT+TGG | + | chr7_4:55700345-55700364 | Msa1164150:intron | 10.0% |
| !!! | TTTTATTTCTAGTATTGATA+AGG | + | chr7_4:55700558-55700577 | Msa1164150:three_prime_UTR | 15.0% |
| !!! | TTTTATTTCTAGTATTGATA+AGG | + | chr7_4:55700558-55700577 | Msa1164150:three_prime_UTR | 15.0% |
| !! | TGATTCTTACTTAATATTTC+TGG | + | chr7_4:55700011-55700030 | Msa1164150:intron | 20.0% |
| !! | TAATCAGTATTAAAATTGGT+TGG | + | chr7_4:55700349-55700368 | Msa1164150:intron | 20.0% |
| !!! | AATGTATTTTGAAATGTTTG+AGG | + | chr7_4:55700621-55700640 | Msa1164150:three_prime_UTR | 20.0% |
| !! | TGATTCTTACTTAATATTTC+TGG | + | chr7_4:55700011-55700030 | Msa1164150:intron | 20.0% |
| !! | TAATCAGTATTAAAATTGGT+TGG | + | chr7_4:55700349-55700368 | Msa1164150:intron | 20.0% |
| !!! | AATGTATTTTGAAATGTTTG+AGG | + | chr7_4:55700621-55700640 | Msa1164150:three_prime_UTR | 20.0% |
| !! | ATTTTCATCTTCAGATTCTT+AGG | + | chr7_4:55699564-55699583 | Msa1164150:intron | 25.0% |
| ! | TGGGTAATATATGTAATGAT+TGG | + | chr7_4:55700163-55700182 | Msa1164150:intron | 25.0% |
| !! | AATGATTGGTGTTTAATAAG+TGG | + | chr7_4:55700177-55700196 | Msa1164150:intron | 25.0% |
| ! | AAATACATTCAACCTAAAAC+TGG | - | chr7_4:55700610-55700629 | None:intergenic | 25.0% |
| ! | TAATTGTGATCAACAATGAT+TGG | + | chr7_4:55700828-55700847 | Msa1164150:three_prime_UTR | 25.0% |
| !! | ATTTTCATCTTCAGATTCTT+AGG | + | chr7_4:55699564-55699583 | Msa1164150:intron | 25.0% |
| ! | TGGGTAATATATGTAATGAT+TGG | + | chr7_4:55700163-55700182 | Msa1164150:intron | 25.0% |
| !! | AATGATTGGTGTTTAATAAG+TGG | + | chr7_4:55700177-55700196 | Msa1164150:intron | 25.0% |
| ! | AAATACATTCAACCTAAAAC+TGG | - | chr7_4:55700610-55700629 | None:intergenic | 25.0% |
| ! | TAATTGTGATCAACAATGAT+TGG | + | chr7_4:55700828-55700847 | Msa1164150:three_prime_UTR | 25.0% |
| ! | TTATTAAAACGCGCTTTTGT+AGG | - | chr7_4:55699607-55699626 | None:intergenic | 30.0% |
| !! | CGATTTTCATTTTGTTTCTC+AGG | + | chr7_4:55699628-55699647 | Msa1164150:intron | 30.0% |
| TTACCTTTCATTTCTCCTTT+GGG | - | chr7_4:55700074-55700093 | None:intergenic | 30.0% | |
| TTTACCTTTCATTTCTCCTT+TGG | - | chr7_4:55700075-55700094 | None:intergenic | 30.0% | |
| ATGATAATATCGATGTAGGT+GGG | + | chr7_4:55700144-55700163 | Msa1164150:intron | 30.0% | |
| GGAATTAGAGTTTAGTAACT+TGG | + | chr7_4:55700280-55700299 | Msa1164150:intron | 30.0% | |
| TCAGTATTAAAATTGGTTGG+AGG | + | chr7_4:55700352-55700371 | Msa1164150:intron | 30.0% | |
| ATTAAAATTGGTTGGAGGAT+CGG | + | chr7_4:55700357-55700376 | Msa1164150:intron | 30.0% | |
| !! | TATGTTTTTATCGCCGTTTT+TGG | + | chr7_4:55700393-55700412 | Msa1164150:intron | 30.0% |
| CACAACATCAAAACCAAAAA+CGG | - | chr7_4:55700409-55700428 | None:intergenic | 30.0% | |
| !! | TTCGTGTTGATTGTAATTGT+AGG | + | chr7_4:55700452-55700471 | Msa1164150:intron | 30.0% |
| !! | TCGTGTTGATTGTAATTGTA+GGG | + | chr7_4:55700453-55700472 | Msa1164150:intron | 30.0% |
| ! | ATTTGATGTTGTCCAGTTTT+AGG | + | chr7_4:55700595-55700614 | Msa1164150:three_prime_UTR | 30.0% |
| !! | ACAAACAACTCTTTAGAACT+AGG | - | chr7_4:55700703-55700722 | None:intergenic | 30.0% |
| TCTCAAGATCAAATAACTGA+TGG | - | chr7_4:55700781-55700800 | None:intergenic | 30.0% | |
| !! | TTTTGCTAATCGATTCATCA+AGG | + | chr7_4:55700851-55700870 | Msa1164150:three_prime_UTR | 30.0% |
| ! | TTTGCTAATCGATTCATCAA+GGG | + | chr7_4:55700852-55700871 | Msa1164150:three_prime_UTR | 30.0% |
| ! | TTATTAAAACGCGCTTTTGT+AGG | - | chr7_4:55699607-55699626 | None:intergenic | 30.0% |
| !! | CGATTTTCATTTTGTTTCTC+AGG | + | chr7_4:55699628-55699647 | Msa1164150:intron | 30.0% |
| TTACCTTTCATTTCTCCTTT+GGG | - | chr7_4:55700074-55700093 | None:intergenic | 30.0% | |
| TTTACCTTTCATTTCTCCTT+TGG | - | chr7_4:55700075-55700094 | None:intergenic | 30.0% | |
| ATGATAATATCGATGTAGGT+GGG | + | chr7_4:55700144-55700163 | Msa1164150:intron | 30.0% | |
| GGAATTAGAGTTTAGTAACT+TGG | + | chr7_4:55700280-55700299 | Msa1164150:intron | 30.0% | |
| TCAGTATTAAAATTGGTTGG+AGG | + | chr7_4:55700352-55700371 | Msa1164150:intron | 30.0% | |
| ATTAAAATTGGTTGGAGGAT+CGG | + | chr7_4:55700357-55700376 | Msa1164150:intron | 30.0% | |
| !! | TATGTTTTTATCGCCGTTTT+TGG | + | chr7_4:55700393-55700412 | Msa1164150:intron | 30.0% |
| CACAACATCAAAACCAAAAA+CGG | - | chr7_4:55700409-55700428 | None:intergenic | 30.0% | |
| !! | TTCGTGTTGATTGTAATTGT+AGG | + | chr7_4:55700452-55700471 | Msa1164150:intron | 30.0% |
| !! | TCGTGTTGATTGTAATTGTA+GGG | + | chr7_4:55700453-55700472 | Msa1164150:intron | 30.0% |
| ! | ATTTGATGTTGTCCAGTTTT+AGG | + | chr7_4:55700595-55700614 | Msa1164150:three_prime_UTR | 30.0% |
| !! | ACAAACAACTCTTTAGAACT+AGG | - | chr7_4:55700703-55700722 | None:intergenic | 30.0% |
| TCTCAAGATCAAATAACTGA+TGG | - | chr7_4:55700781-55700800 | None:intergenic | 30.0% | |
| !! | TTTTGCTAATCGATTCATCA+AGG | + | chr7_4:55700851-55700870 | Msa1164150:three_prime_UTR | 30.0% |
| ! | TTTGCTAATCGATTCATCAA+GGG | + | chr7_4:55700852-55700871 | Msa1164150:three_prime_UTR | 30.0% |
| AAACGAAAGAGGATTGAGTT+AGG | + | chr7_4:55699475-55699494 | Msa1164150:five_prime_UTR | 35.0% | |
| AACGAAAGAGGATTGAGTTA+GGG | + | chr7_4:55699476-55699495 | Msa1164150:five_prime_UTR | 35.0% | |
| !! | ATTTCCGTCAAAGGTATCAA+AGG | + | chr7_4:55699754-55699773 | Msa1164150:CDS | 35.0% |
| !! | GGTGTTATTGTTAATCCCAA+AGG | + | chr7_4:55700056-55700075 | Msa1164150:CDS | 35.0% |
| AATCCCAAAGGAGAAATGAA+AGG | + | chr7_4:55700068-55700087 | Msa1164150:CDS | 35.0% | |
| CTACATCGATATTATCATCG+TGG | - | chr7_4:55700142-55700161 | None:intergenic | 35.0% | |
| CACGATGATAATATCGATGT+AGG | + | chr7_4:55700140-55700159 | Msa1164150:intron | 35.0% | |
| GATGATAATATCGATGTAGG+TGG | + | chr7_4:55700143-55700162 | Msa1164150:intron | 35.0% | |
| ACTGCTGTGTCTTCAATAAT+TGG | + | chr7_4:55700259-55700278 | Msa1164150:intron | 35.0% | |
| TTAAAATTGGTTGGAGGATC+GGG | + | chr7_4:55700358-55700377 | Msa1164150:intron | 35.0% | |
| !! | GGTTTTGATGTTGTGCTTTT+TGG | + | chr7_4:55700414-55700433 | Msa1164150:intron | 35.0% |
| GTTTATTCTTGTGCAATCTG+CGG | + | chr7_4:55700723-55700742 | Msa1164150:three_prime_UTR | 35.0% | |
| ! | ATCGATTCATCAAGGGAATT+TGG | + | chr7_4:55700859-55700878 | Msa1164150:three_prime_UTR | 35.0% |
| TCGATTCATCAAGGGAATTT+GGG | + | chr7_4:55700860-55700879 | Msa1164150:three_prime_UTR | 35.0% | |
| AAACGAAAGAGGATTGAGTT+AGG | + | chr7_4:55699475-55699494 | Msa1164150:five_prime_UTR | 35.0% | |
| AACGAAAGAGGATTGAGTTA+GGG | + | chr7_4:55699476-55699495 | Msa1164150:five_prime_UTR | 35.0% | |
| !! | ATTTCCGTCAAAGGTATCAA+AGG | + | chr7_4:55699754-55699773 | Msa1164150:CDS | 35.0% |
| !! | GGTGTTATTGTTAATCCCAA+AGG | + | chr7_4:55700056-55700075 | Msa1164150:CDS | 35.0% |
| AATCCCAAAGGAGAAATGAA+AGG | + | chr7_4:55700068-55700087 | Msa1164150:CDS | 35.0% | |
| CTACATCGATATTATCATCG+TGG | - | chr7_4:55700142-55700161 | None:intergenic | 35.0% | |
| CACGATGATAATATCGATGT+AGG | + | chr7_4:55700140-55700159 | Msa1164150:intron | 35.0% | |
| GATGATAATATCGATGTAGG+TGG | + | chr7_4:55700143-55700162 | Msa1164150:intron | 35.0% | |
| ACTGCTGTGTCTTCAATAAT+TGG | + | chr7_4:55700259-55700278 | Msa1164150:intron | 35.0% | |
| TTAAAATTGGTTGGAGGATC+GGG | + | chr7_4:55700358-55700377 | Msa1164150:intron | 35.0% | |
| !! | GGTTTTGATGTTGTGCTTTT+TGG | + | chr7_4:55700414-55700433 | Msa1164150:intron | 35.0% |
| GTTTATTCTTGTGCAATCTG+CGG | + | chr7_4:55700723-55700742 | Msa1164150:three_prime_UTR | 35.0% | |
| ! | ATCGATTCATCAAGGGAATT+TGG | + | chr7_4:55700859-55700878 | Msa1164150:three_prime_UTR | 35.0% |
| TCGATTCATCAAGGGAATTT+GGG | + | chr7_4:55700860-55700879 | Msa1164150:three_prime_UTR | 35.0% | |
| !! | TCATTTTGTTTCTCAGGTCG+CGG | + | chr7_4:55699634-55699653 | Msa1164150:intron | 40.0% |
| TAACAAGTTCAGGATGTCAC+TGG | + | chr7_4:55699669-55699688 | Msa1164150:CDS | 40.0% | |
| AACAAGTTCAGGATGTCACT+GGG | + | chr7_4:55699670-55699689 | Msa1164150:CDS | 40.0% | |
| !! | ATTCTTAGCTCCGGTGTTAT+CGG | - | chr7_4:55699725-55699744 | None:intergenic | 40.0% |
| GATGTAGAGATTCTTAGCTC+CGG | - | chr7_4:55699734-55699753 | None:intergenic | 40.0% | |
| CTCTACATCATTTCCGTCAA+AGG | + | chr7_4:55699745-55699764 | Msa1164150:CDS | 40.0% | |
| CCTTCCTTTGATACCTTTGA+CGG | - | chr7_4:55699761-55699780 | None:intergenic | 40.0% | |
| ACATGAAAACACCGTCCTTT+CGG | - | chr7_4:55699906-55699925 | None:intergenic | 40.0% | |
| ! | GGTGTTTTCATGTACTTCGA+AGG | + | chr7_4:55699913-55699932 | Msa1164150:CDS | 40.0% |
| TTGTATTGTGCAGACAATGC+TGG | + | chr7_4:55700035-55700054 | Msa1164150:intron | 40.0% | |
| TTGTTGTACTGCGAAGTCTT+TGG | + | chr7_4:55700665-55700684 | Msa1164150:three_prime_UTR | 40.0% | |
| ! | ATGGTGCGTTGATATGCAAA+TGG | - | chr7_4:55700762-55700781 | None:intergenic | 40.0% |
| !! | TCATTTTGTTTCTCAGGTCG+CGG | + | chr7_4:55699634-55699653 | Msa1164150:intron | 40.0% |
| TAACAAGTTCAGGATGTCAC+TGG | + | chr7_4:55699669-55699688 | Msa1164150:CDS | 40.0% | |
| AACAAGTTCAGGATGTCACT+GGG | + | chr7_4:55699670-55699689 | Msa1164150:CDS | 40.0% | |
| !! | ATTCTTAGCTCCGGTGTTAT+CGG | - | chr7_4:55699725-55699744 | None:intergenic | 40.0% |
| GATGTAGAGATTCTTAGCTC+CGG | - | chr7_4:55699734-55699753 | None:intergenic | 40.0% | |
| CTCTACATCATTTCCGTCAA+AGG | + | chr7_4:55699745-55699764 | Msa1164150:CDS | 40.0% | |
| CCTTCCTTTGATACCTTTGA+CGG | - | chr7_4:55699761-55699780 | None:intergenic | 40.0% | |
| ACATGAAAACACCGTCCTTT+CGG | - | chr7_4:55699906-55699925 | None:intergenic | 40.0% | |
| ! | GGTGTTTTCATGTACTTCGA+AGG | + | chr7_4:55699913-55699932 | Msa1164150:CDS | 40.0% |
| TTGTATTGTGCAGACAATGC+TGG | + | chr7_4:55700035-55700054 | Msa1164150:intron | 40.0% | |
| TTGTTGTACTGCGAAGTCTT+TGG | + | chr7_4:55700665-55700684 | Msa1164150:three_prime_UTR | 40.0% | |
| ! | ATGGTGCGTTGATATGCAAA+TGG | - | chr7_4:55700762-55700781 | None:intergenic | 40.0% |
| !! | CCGTCAAAGGTATCAAAGGA+AGG | + | chr7_4:55699758-55699777 | Msa1164150:CDS | 45.0% |
| ATCAGGCTTACCCTTCTTCA+CGG | - | chr7_4:55699830-55699849 | None:intergenic | 45.0% | |
| TAAGCCTGATCTCCGTAAGA+AGG | + | chr7_4:55699840-55699859 | Msa1164150:CDS | 45.0% | |
| ATTGTAGGGTCTGCTATCAC+TGG | + | chr7_4:55700467-55700486 | Msa1164150:intron | 45.0% | |
| TCTGCTATCACTGGTCCAAT+CGG | + | chr7_4:55700476-55700495 | Msa1164150:CDS | 45.0% | |
| TTAGCAGCACTTGCAATCCT+AGG | - | chr7_4:55700524-55700543 | None:intergenic | 45.0% | |
| CGTTGATATGCAAATGGCAC+AGG | - | chr7_4:55700756-55700775 | None:intergenic | 45.0% | |
| !! | CCGTCAAAGGTATCAAAGGA+AGG | + | chr7_4:55699758-55699777 | Msa1164150:CDS | 45.0% |
| ATCAGGCTTACCCTTCTTCA+CGG | - | chr7_4:55699830-55699849 | None:intergenic | 45.0% | |
| TAAGCCTGATCTCCGTAAGA+AGG | + | chr7_4:55699840-55699859 | Msa1164150:CDS | 45.0% | |
| ATTGTAGGGTCTGCTATCAC+TGG | + | chr7_4:55700467-55700486 | Msa1164150:intron | 45.0% | |
| TCTGCTATCACTGGTCCAAT+CGG | + | chr7_4:55700476-55700495 | Msa1164150:CDS | 45.0% | |
| TTAGCAGCACTTGCAATCCT+AGG | - | chr7_4:55700524-55700543 | None:intergenic | 45.0% | |
| CGTTGATATGCAAATGGCAC+AGG | - | chr7_4:55700756-55700775 | None:intergenic | 45.0% | |
| !! | TTTTGTTTCTCAGGTCGCGG+AGG | + | chr7_4:55699637-55699656 | Msa1164150:intron | 50.0% |
| !! | CATCCTGAACTTGTTACCCG+CGG | - | chr7_4:55699665-55699684 | None:intergenic | 50.0% |
| ! | GTGAATTGCGCCGATAACAC+CGG | + | chr7_4:55699712-55699731 | Msa1164150:CDS | 50.0% |
| CAACGCAAGCAGAAGGCAAA+CGG | - | chr7_4:55699789-55699808 | None:intergenic | 50.0% | |
| ATGTCACCAACGCAAGCAGA+AGG | - | chr7_4:55699796-55699815 | None:intergenic | 50.0% | |
| !! | TTCTGCTTGCGTTGGTGACA+TGG | + | chr7_4:55699795-55699814 | Msa1164150:CDS | 50.0% |
| !! | TTGCGTTGGTGACATGGTGA+TGG | + | chr7_4:55699801-55699820 | Msa1164150:CDS | 50.0% |
| AGCACCTTCTTACGGAGATC+AGG | - | chr7_4:55699847-55699866 | None:intergenic | 50.0% | |
| TTTACGCTGGCGAACGATGA+CGG | - | chr7_4:55699875-55699894 | None:intergenic | 50.0% | |
| CTGCTATCACTGGTCCAATC+GGG | + | chr7_4:55700477-55700496 | Msa1164150:CDS | 50.0% | |
| TATCACTGGTCCAATCGGGA+AGG | + | chr7_4:55700481-55700500 | Msa1164150:CDS | 50.0% | |
| ! | GGAAGGAGTGTGCTGATCTA+TGG | + | chr7_4:55700498-55700517 | Msa1164150:CDS | 50.0% |
| ! | AGTGTGCTGATCTATGGCCT+AGG | + | chr7_4:55700504-55700523 | Msa1164150:CDS | 50.0% |
| !! | TTTTGTTTCTCAGGTCGCGG+AGG | + | chr7_4:55699637-55699656 | Msa1164150:intron | 50.0% |
| !! | CATCCTGAACTTGTTACCCG+CGG | - | chr7_4:55699665-55699684 | None:intergenic | 50.0% |
| ! | GTGAATTGCGCCGATAACAC+CGG | + | chr7_4:55699712-55699731 | Msa1164150:CDS | 50.0% |
| CAACGCAAGCAGAAGGCAAA+CGG | - | chr7_4:55699789-55699808 | None:intergenic | 50.0% | |
| ATGTCACCAACGCAAGCAGA+AGG | - | chr7_4:55699796-55699815 | None:intergenic | 50.0% | |
| !! | TTCTGCTTGCGTTGGTGACA+TGG | + | chr7_4:55699795-55699814 | Msa1164150:CDS | 50.0% |
| !! | TTGCGTTGGTGACATGGTGA+TGG | + | chr7_4:55699801-55699820 | Msa1164150:CDS | 50.0% |
| AGCACCTTCTTACGGAGATC+AGG | - | chr7_4:55699847-55699866 | None:intergenic | 50.0% | |
| TTTACGCTGGCGAACGATGA+CGG | - | chr7_4:55699875-55699894 | None:intergenic | 50.0% | |
| CTGCTATCACTGGTCCAATC+GGG | + | chr7_4:55700477-55700496 | Msa1164150:CDS | 50.0% | |
| TATCACTGGTCCAATCGGGA+AGG | + | chr7_4:55700481-55700500 | Msa1164150:CDS | 50.0% | |
| ! | GGAAGGAGTGTGCTGATCTA+TGG | + | chr7_4:55700498-55700517 | Msa1164150:CDS | 50.0% |
| ! | AGTGTGCTGATCTATGGCCT+AGG | + | chr7_4:55700504-55700523 | Msa1164150:CDS | 50.0% |
| GCAGCAGCAATGTCGAAGAG+AGG | + | chr7_4:55699532-55699551 | Msa1164150:exon | 55.0% | |
| GATCCGCGGGTAACAAGTTC+AGG | + | chr7_4:55699659-55699678 | Msa1164150:CDS | 55.0% | |
| GATGTCACTGGGTCTACCAG+TGG | + | chr7_4:55699681-55699700 | Msa1164150:CDS | 55.0% | |
| CGTTTGCCTTCTGCTTGCGT+TGG | + | chr7_4:55699787-55699806 | Msa1164150:CDS | 55.0% | |
| GTGATGGCCACCGTGAAGAA+GGG | + | chr7_4:55699817-55699836 | Msa1164150:CDS | 55.0% | |
| AGGCTTACCCTTCTTCACGG+TGG | - | chr7_4:55699827-55699846 | None:intergenic | 55.0% | |
| !! | CGGCAGGAAGCACCTTCTTA+CGG | - | chr7_4:55699855-55699874 | None:intergenic | 55.0% |
| TCGTTCGCCAGCGTAAACCA+TGG | + | chr7_4:55699878-55699897 | Msa1164150:CDS | 55.0% | |
| ! | AAACCATGGCGCCGAAAGGA+CGG | + | chr7_4:55699892-55699911 | Msa1164150:CDS | 55.0% |
| TCAGCACACTCCTTCCCGAT+TGG | - | chr7_4:55700494-55700513 | None:intergenic | 55.0% | |
| GCAGCAGCAATGTCGAAGAG+AGG | + | chr7_4:55699532-55699551 | Msa1164150:exon | 55.0% | |
| GATCCGCGGGTAACAAGTTC+AGG | + | chr7_4:55699659-55699678 | Msa1164150:CDS | 55.0% | |
| GATGTCACTGGGTCTACCAG+TGG | + | chr7_4:55699681-55699700 | Msa1164150:CDS | 55.0% | |
| CGTTTGCCTTCTGCTTGCGT+TGG | + | chr7_4:55699787-55699806 | Msa1164150:CDS | 55.0% | |
| GTGATGGCCACCGTGAAGAA+GGG | + | chr7_4:55699817-55699836 | Msa1164150:CDS | 55.0% | |
| AGGCTTACCCTTCTTCACGG+TGG | - | chr7_4:55699827-55699846 | None:intergenic | 55.0% | |
| !! | CGGCAGGAAGCACCTTCTTA+CGG | - | chr7_4:55699855-55699874 | None:intergenic | 55.0% |
| TCGTTCGCCAGCGTAAACCA+TGG | + | chr7_4:55699878-55699897 | Msa1164150:CDS | 55.0% | |
| ! | AAACCATGGCGCCGAAAGGA+CGG | + | chr7_4:55699892-55699911 | Msa1164150:CDS | 55.0% |
| TCAGCACACTCCTTCCCGAT+TGG | - | chr7_4:55700494-55700513 | None:intergenic | 55.0% | |
| GTCACTGGGTCTACCAGTGG+CGG | + | chr7_4:55699684-55699703 | Msa1164150:CDS | 60.0% | |
| ! | GGTGATGGCCACCGTGAAGA+AGG | + | chr7_4:55699816-55699835 | Msa1164150:CDS | 60.0% |
| TTCGGCGCCATGGTTTACGC+TGG | - | chr7_4:55699888-55699907 | None:intergenic | 60.0% | |
| ! | GCGTAAACCATGGCGCCGAA+AGG | + | chr7_4:55699888-55699907 | Msa1164150:CDS | 60.0% |
| GTCACTGGGTCTACCAGTGG+CGG | + | chr7_4:55699684-55699703 | Msa1164150:CDS | 60.0% | |
| ! | GGTGATGGCCACCGTGAAGA+AGG | + | chr7_4:55699816-55699835 | Msa1164150:CDS | 60.0% |
| TTCGGCGCCATGGTTTACGC+TGG | - | chr7_4:55699888-55699907 | None:intergenic | 60.0% | |
| ! | GCGTAAACCATGGCGCCGAA+AGG | + | chr7_4:55699888-55699907 | Msa1164150:CDS | 60.0% |
| CAATTCACCGTCGCCGCCAC+TGG | - | chr7_4:55699700-55699719 | None:intergenic | 65.0% | |
| ACACCGTCCTTTCGGCGCCA+TGG | - | chr7_4:55699898-55699917 | None:intergenic | 65.0% | |
| CAATTCACCGTCGCCGCCAC+TGG | - | chr7_4:55699700-55699719 | None:intergenic | 65.0% | |
| ACACCGTCCTTTCGGCGCCA+TGG | - | chr7_4:55699898-55699917 | None:intergenic | 65.0% | |
| CTCAGGTCGCGGAGGATCCG+CGG | + | chr7_4:55699645-55699664 | Msa1164150:intron | 70.0% | |
| TCAGGTCGCGGAGGATCCGC+GGG | + | chr7_4:55699646-55699665 | Msa1164150:intron | 70.0% | |
| GGGTCTACCAGTGGCGGCGA+CGG | + | chr7_4:55699690-55699709 | Msa1164150:CDS | 70.0% | |
| ! | CGCTGGCGAACGATGACGGC+AGG | - | chr7_4:55699871-55699890 | None:intergenic | 70.0% |
| CTCAGGTCGCGGAGGATCCG+CGG | + | chr7_4:55699645-55699664 | Msa1164150:intron | 70.0% | |
| TCAGGTCGCGGAGGATCCGC+GGG | + | chr7_4:55699646-55699665 | Msa1164150:intron | 70.0% | |
| GGGTCTACCAGTGGCGGCGA+CGG | + | chr7_4:55699690-55699709 | Msa1164150:CDS | 70.0% | |
| ! | CGCTGGCGAACGATGACGGC+AGG | - | chr7_4:55699871-55699890 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 55699475 | 55700893 | 55699475 | ID=Msa1164150;Name=Msa1164150 |
| chr7_4 | mRNA | 55699475 | 55700893 | 55699475 | ID=Msa1164150-mRNA-1;Parent=Msa1164150;Name=Msa1164150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=66|1|1|1|1|1|4|337|140 |
| chr7_4 | exon | 55699475 | 55699553 | 55699475 | ID=Msa1164150-mRNA-1:exon:16347;Parent=Msa1164150-mRNA-1 |
| chr7_4 | exon | 55699650 | 55699934 | 55699650 | ID=Msa1164150-mRNA-1:exon:16348;Parent=Msa1164150-mRNA-1 |
| chr7_4 | exon | 55700048 | 55700089 | 55700048 | ID=Msa1164150-mRNA-1:exon:16349;Parent=Msa1164150-mRNA-1 |
| chr7_4 | exon | 55700474 | 55700893 | 55700474 | ID=Msa1164150-mRNA-1:exon:16350;Parent=Msa1164150-mRNA-1 |
| chr7_4 | five_prime_UTR | 55699475 | 55699540 | 55699475 | ID=Msa1164150-mRNA-1:five_prime_utr;Parent=Msa1164150-mRNA-1 |
| chr7_4 | CDS | 55699541 | 55699553 | 55699541 | ID=Msa1164150-mRNA-1:cds;Parent=Msa1164150-mRNA-1 |
| chr7_4 | CDS | 55699650 | 55699934 | 55699650 | ID=Msa1164150-mRNA-1:cds;Parent=Msa1164150-mRNA-1 |
| chr7_4 | CDS | 55700048 | 55700089 | 55700048 | ID=Msa1164150-mRNA-1:cds;Parent=Msa1164150-mRNA-1 |
| chr7_4 | CDS | 55700474 | 55700556 | 55700474 | ID=Msa1164150-mRNA-1:cds;Parent=Msa1164150-mRNA-1 |
| chr7_4 | three_prime_UTR | 55700557 | 55700893 | 55700557 | ID=Msa1164150-mRNA-1:three_prime_utr;Parent=Msa1164150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
