Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0584030 | XP_003631001.1 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 2.61e-96 | 283 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0584030 | sp|P46293|RS16_GOSHI | 93.571 | 140 | 9 | 0 | 1 | 140 | 6 | 145 | 1.09e-92 | 267 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0584030 | G7LBJ0 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 1.25e-96 | 283 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002750 | Msa0584030 | 0.801540 | 8.581597e-49 | -8.615850e-47 |
Msa0002790 | Msa0584030 | 0.818554 | 1.845154e-52 | -8.615850e-47 |
Msa0003870 | Msa0584030 | 0.807855 | 4.122736e-50 | -8.615850e-47 |
Msa0027590 | Msa0584030 | 0.808196 | 3.487698e-50 | -8.615850e-47 |
Msa0032780 | Msa0584030 | 0.819978 | 8.741568e-53 | -8.615850e-47 |
Msa0042480 | Msa0584030 | 0.844529 | 7.146281e-59 | -8.615850e-47 |
Msa0045730 | Msa0584030 | 0.800224 | 1.593527e-48 | -8.615850e-47 |
Msa0049690 | Msa0584030 | 0.814079 | 1.849292e-51 | -8.615850e-47 |
Msa0075350 | Msa0584030 | 0.820714 | 5.928370e-53 | -8.615850e-47 |
Msa0079590 | Msa0584030 | 0.829146 | 6.060557e-55 | -8.615850e-47 |
Msa0116130 | Msa0584030 | 0.827282 | 1.705254e-54 | -8.615850e-47 |
Msa0116670 | Msa0584030 | 0.829060 | 6.357319e-55 | -8.615850e-47 |
Msa0138890 | Msa0584030 | 0.811263 | 7.641565e-51 | -8.615850e-47 |
Msa0172900 | Msa0584030 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
Msa0172930 | Msa0584030 | 0.803749 | 3.004944e-49 | -8.615850e-47 |
Msa0173530 | Msa0584030 | 0.830496 | 2.842363e-55 | -8.615850e-47 |
Msa0186740 | Msa0584030 | 0.838946 | 2.125960e-57 | -8.615850e-47 |
Msa0191450 | Msa0584030 | 0.827752 | 1.315433e-54 | -8.615850e-47 |
Msa0191550 | Msa0584030 | 0.805733 | 1.157811e-49 | -8.615850e-47 |
Msa0194940 | Msa0584030 | 0.815483 | 9.032640e-52 | -8.615850e-47 |
Msa0210360 | Msa0584030 | 0.864553 | 1.119379e-64 | -8.615850e-47 |
Msa0218830 | Msa0584030 | 0.838932 | 2.143587e-57 | -8.615850e-47 |
Msa0221030 | Msa0584030 | 0.841714 | 4.018933e-58 | -8.615850e-47 |
Msa0229150 | Msa0584030 | 0.822736 | 2.018941e-53 | -8.615850e-47 |
Msa0230490 | Msa0584030 | 0.817672 | 2.920205e-52 | -8.615850e-47 |
Msa0369410 | Msa0584030 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
Msa0376830 | Msa0584030 | 0.821845 | 3.251527e-53 | -8.615850e-47 |
Msa0376890 | Msa0584030 | 0.817093 | 3.943195e-52 | -8.615850e-47 |
Msa0463520 | Msa0584030 | 0.805297 | 1.429021e-49 | -8.615850e-47 |
Msa0471880 | Msa0584030 | 0.875999 | 1.978295e-68 | -8.615850e-47 |
Msa0481520 | Msa0584030 | 0.826527 | 2.582827e-54 | -8.615850e-47 |
Msa0481850 | Msa0584030 | 0.839408 | 1.613311e-57 | -8.615850e-47 |
Msa0257450 | Msa0584030 | 0.839682 | 1.368845e-57 | -8.615850e-47 |
Msa0265250 | Msa0584030 | 0.809477 | 1.856125e-50 | -8.615850e-47 |
Msa0297830 | Msa0584030 | 0.846349 | 2.297118e-59 | -8.615850e-47 |
Msa0298870 | Msa0584030 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
Msa0301220 | Msa0584030 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
Msa0335840 | Msa0584030 | 0.855083 | 8.002137e-62 | -8.615850e-47 |
Msa0337670 | Msa0584030 | 0.840927 | 6.474854e-58 | -8.615850e-47 |
Msa0348830 | Msa0584030 | 0.826417 | 2.744802e-54 | -8.615850e-47 |
Msa0483390 | Msa0584030 | 0.800818 | 1.205598e-48 | -8.615850e-47 |
Msa0529900 | Msa0584030 | 0.811416 | 7.076687e-51 | -8.615850e-47 |
Msa0546030 | Msa0584030 | 0.804314 | 2.292140e-49 | -8.615850e-47 |
Msa0584030 | Msa0591050 | 0.809633 | 1.718168e-50 | -8.615850e-47 |
Msa0584030 | Msa0604960 | 0.835873 | 1.302487e-56 | -8.615850e-47 |
Msa0584030 | Msa0625570 | 0.810641 | 1.042126e-50 | -8.615850e-47 |
Msa0584030 | Msa0656410 | 0.805430 | 1.340110e-49 | -8.615850e-47 |
Msa0584030 | Msa0705800 | 0.879471 | 1.212737e-69 | -8.615850e-47 |
Msa0584030 | Msa0712610 | 0.871499 | 6.524323e-67 | -8.615850e-47 |
Msa0584030 | Msa0717380 | 0.834846 | 2.366454e-56 | -8.615850e-47 |
Msa0584030 | Msa0729200 | 0.844188 | 8.827029e-59 | -8.615850e-47 |
Msa0584030 | Msa0752910 | 0.860441 | 2.061439e-63 | -8.615850e-47 |
Msa0584030 | Msa0766080 | 0.809411 | 1.917184e-50 | -8.615850e-47 |
Msa0584030 | Msa0769590 | 0.833817 | 4.288224e-56 | -8.615850e-47 |
Msa0584030 | Msa0781080 | 0.851602 | 7.975554e-61 | -8.615850e-47 |
Msa0584030 | Msa0783630 | 0.819448 | 1.155296e-52 | -8.615850e-47 |
Msa0584030 | Msa0788380 | 0.845928 | 2.990054e-59 | -8.615850e-47 |
Msa0584030 | Msa0792420 | 0.830930 | 2.224506e-55 | -8.615850e-47 |
Msa0584030 | Msa0799830 | 0.802455 | 5.563867e-49 | -8.615850e-47 |
Msa0584030 | Msa0806880 | 0.809832 | 1.556977e-50 | -8.615850e-47 |
Msa0584030 | Msa0822580 | 0.825948 | 3.547890e-54 | -8.615850e-47 |
Msa0584030 | Msa0827380 | 0.809958 | 1.462776e-50 | -8.615850e-47 |
Msa0584030 | Msa0838070 | 0.807437 | 5.058086e-50 | -8.615850e-47 |
Msa0584030 | Msa0861320 | 0.809356 | 1.970397e-50 | -8.615850e-47 |
Msa0584030 | Msa0876170 | 0.846491 | 2.100723e-59 | -8.615850e-47 |
Msa0584030 | Msa0888810 | 0.850722 | 1.413327e-60 | -8.615850e-47 |
Msa0584030 | Msa0915540 | 0.854374 | 1.284423e-61 | -8.615850e-47 |
Msa0584030 | Msa0945480 | 0.816394 | 5.657259e-52 | -8.615850e-47 |
Msa0584030 | Msa1021120 | 0.805390 | 1.366186e-49 | -8.615850e-47 |
Msa0584030 | Msa1037290 | 0.871105 | 8.806462e-67 | -8.615850e-47 |
Msa0584030 | Msa1039520 | 0.802954 | 4.389871e-49 | -8.615850e-47 |
Msa0584030 | Msa1040160 | 0.812566 | 3.974294e-51 | -8.615850e-47 |
Msa0584030 | Msa1041680 | 0.855573 | 5.762026e-62 | -8.615850e-47 |
Msa0584030 | Msa1078870 | 0.854880 | 9.163991e-62 | -8.615850e-47 |
Msa0584030 | Msa1078980 | 0.846832 | 1.694814e-59 | -8.615850e-47 |
Msa0584030 | Msa1080350 | 0.857759 | 1.310900e-62 | -8.615850e-47 |
Msa0584030 | Msa1082170 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
Msa0584030 | Msa1089220 | 0.820464 | 6.763982e-53 | -8.615850e-47 |
Msa0584030 | Msa1094380 | 0.836279 | 1.026838e-56 | -8.615850e-47 |
Msa0584030 | Msa1096900 | 0.801201 | 1.006821e-48 | -8.615850e-47 |
Msa0584030 | Msa1125860 | 0.849763 | 2.623918e-60 | -8.615850e-47 |
Msa0584030 | Msa1126060 | 0.849866 | 2.455198e-60 | -8.615850e-47 |
Msa0584030 | Msa1126520 | 0.860977 | 1.417110e-63 | -8.615850e-47 |
Msa0584030 | Msa1164150 | 0.848783 | 4.917339e-60 | -8.615850e-47 |
Msa0584030 | Msa1166570 | 0.854152 | 1.488424e-61 | -8.615850e-47 |
Msa0584030 | Msa1167540 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
Msa0584030 | Msa1169180 | 0.828602 | 8.207541e-55 | -8.615850e-47 |
Msa0584030 | Msa1186030 | 0.814406 | 1.565587e-51 | -8.615850e-47 |
Msa0584030 | Msa1188260 | 0.801856 | 7.390159e-49 | -8.615850e-47 |
Msa0584030 | Msa1215820 | 0.805928 | 1.053328e-49 | -8.615850e-47 |
Msa0584030 | Msa1218170 | 0.822105 | 2.829415e-53 | -8.615850e-47 |
Msa0584030 | Msa1241190 | 0.800749 | 1.245494e-48 | -8.615850e-47 |
Msa0584030 | Msa1256840 | 0.826211 | 3.071782e-54 | -8.615850e-47 |
Msa0584030 | Msa1266060 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
Msa0584030 | Msa1311400 | 0.898429 | 5.354900e-77 | -8.615850e-47 |
Msa0584030 | Msa1321790 | 0.821778 | 3.369255e-53 | -8.615850e-47 |
Msa0584030 | Msa1332250 | 0.883718 | 3.538859e-71 | -8.615850e-47 |
Msa0584030 | Msa1338190 | 0.836040 | 1.181093e-56 | -8.615850e-47 |
Msa0584030 | Msa1343260 | 0.801059 | 1.076611e-48 | -8.615850e-47 |
Msa0584030 | Msa1344950 | 0.808136 | 3.592666e-50 | -8.615850e-47 |
Msa0584030 | Msa1349570 | 0.800562 | 1.359441e-48 | -8.615850e-47 |
Msa0584030 | Msa1356790 | 0.855963 | 4.431318e-62 | -8.615850e-47 |
Msa0584030 | Msa1362790 | 0.832664 | 8.310891e-56 | -8.615850e-47 |
Msa0584030 | Msa1368920 | 0.869773 | 2.407454e-66 | -8.615850e-47 |
Msa0584030 | Msa1369190 | 0.824604 | 7.376038e-54 | -8.615850e-47 |
Msa0584030 | Msa1374240 | 0.944705 | 1.192852e-103 | -8.615850e-47 |
Msa0584030 | Msa1392590 | 0.823079 | 1.679977e-53 | -8.615850e-47 |
Msa0584030 | Msa1397100 | 0.878561 | 2.542903e-69 | -8.615850e-47 |
Msa0584030 | Msa1403910 | 0.888340 | 6.437749e-73 | -8.615850e-47 |
Msa0584030 | Msa1406080 | 0.816938 | 4.272155e-52 | -8.615850e-47 |
Msa0584030 | Msa1413500 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
Msa0584030 | Msa1418770 | 0.912922 | 1.116522e-83 | -8.615850e-47 |
Msa0584030 | Msa1426120 | 0.866406 | 2.919487e-65 | -8.615850e-47 |
Msa0584030 | Msa1426370 | 0.834863 | 2.344097e-56 | -8.615850e-47 |
Msa0584030 | Msa1426490 | 0.877666 | 5.231251e-69 | -8.615850e-47 |
Msa0584030 | Msa1437280 | 0.817983 | 2.484185e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0584030 | MtrunA17_Chr8g0392251 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 2.40e-100 | 283 |
Msa0584030 | MtrunA17_Chr8g0392191 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 2.40e-100 | 283 |
Msa0584030 | MtrunA17_Chr5g0432551 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 6.11e-100 | 282 |
Msa0584030 | MtrunA17_Chr4g0044571 | 94.286 | 140 | 8 | 0 | 1 | 140 | 4 | 143 | 7.79e-96 | 272 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0584030 | AT2G09990.1 | 89.209 | 139 | 15 | 0 | 2 | 140 | 8 | 146 | 1.92e-91 | 261 |
Msa0584030 | AT5G18380.1 | 88.489 | 139 | 16 | 0 | 2 | 140 | 8 | 146 | 3.25e-91 | 261 |
Msa0584030 | AT3G04230.1 | 83.453 | 139 | 23 | 0 | 2 | 140 | 8 | 146 | 6.19e-85 | 245 |
Msa0584030 | AT5G18380.2 | 86.400 | 125 | 17 | 0 | 2 | 126 | 8 | 132 | 1.67e-78 | 229 |
Msa0584030 | AT5G18380.3 | 86.111 | 108 | 15 | 0 | 2 | 109 | 8 | 115 | 5.55e-67 | 199 |
Find 38 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATCTAACGATAAGATTTC+TGG | 0.210396 | 4_2:+2942025 | None:intergenic |
ACAGAGTAAGAAAGAGATTA+AGG | 0.239341 | 4_2:-2942142 | Msa0584030:CDS |
CCGCAACGGCGTTCTTCTTC+CGG | 0.308388 | 4_2:+2942406 | None:intergenic |
GCCTGAGATTCTTCGTTTCA+AGG | 0.344740 | 4_2:-2942319 | Msa0584030:CDS |
CGCTGTGAGCCTAAGAAGTT+TGG | 0.359075 | 4_2:-2942072 | Msa0584030:CDS |
TCAGAGTATTGCTAAGGCTT+TGG | 0.386737 | 4_2:-2942193 | Msa0584030:CDS |
CCACGACCACCAAACTTCTT+AGG | 0.436009 | 4_2:+2942063 | None:intergenic |
TACGAACCAATCCTCCTTCT+CGG | 0.444217 | 4_2:-2942294 | Msa0584030:CDS |
GTTTCGCCGGCGTTGATATG+AGG | 0.478501 | 4_2:-2942263 | Msa0584030:CDS |
GCCTTGAAACGAAGAATCTC+AGG | 0.478888 | 4_2:+2942318 | None:intergenic |
CTCGGAAGACACCGTTTCGC+CGG | 0.484088 | 4_2:-2942276 | Msa0584030:CDS |
ATGGAACAAGTGCAATGCTT+TGG | 0.487256 | 4_2:-2942429 | Msa0584030:CDS |
CAACGGCTGTCCAATCGAAC+TGG | 0.488470 | 4_2:-2942346 | Msa0584030:CDS |
GTGGTCGTGGTGCTCGTGCT+AGG | 0.502073 | 4_2:-2942050 | Msa0584030:CDS |
CCTAAGAAGTTTGGTGGTCG+TGG | 0.511400 | 4_2:-2942063 | Msa0584030:CDS |
AGGATCCGTGTGAAGGGAGG+AGG | 0.521481 | 4_2:-2942243 | Msa0584030:CDS |
TCATATCAACGCCGGCGAAA+CGG | 0.524265 | 4_2:+2942265 | None:intergenic |
TCAGGCTCAACCAGTTCGAT+TGG | 0.524396 | 4_2:+2942336 | None:intergenic |
AACAAGTGCAATGCTTTGGC+CGG | 0.546867 | 4_2:-2942425 | Msa0584030:CDS |
AACGGTGTCTTCCGAGAAGG+AGG | 0.549270 | 4_2:+2942283 | None:intergenic |
TGTGAGCCTAAGAAGTTTGG+TGG | 0.558448 | 4_2:-2942069 | Msa0584030:CDS |
GACCGCGACCTCTCTTGCAG+TGG | 0.558828 | 4_2:+2942379 | None:intergenic |
ACCCACTGCAAGAGAGGTCG+CGG | 0.562945 | 4_2:-2942381 | Msa0584030:CDS |
CATTCGTCAGAGTATTGCTA+AGG | 0.576627 | 4_2:-2942199 | Msa0584030:CDS |
TGATATGAGGATCCGTGTGA+AGG | 0.579448 | 4_2:-2942250 | Msa0584030:CDS |
GCGGTAACCCACTGCAAGAG+AGG | 0.580471 | 4_2:-2942387 | Msa0584030:CDS |
TTCTTAGGCTCACAGCGTCT+AGG | 0.590494 | 4_2:+2942078 | None:intergenic |
TGTCTTCCGAGAAGGAGGAT+TGG | 0.592227 | 4_2:+2942288 | None:intergenic |
GATATGAGGATCCGTGTGAA+GGG | 0.594162 | 4_2:-2942249 | Msa0584030:CDS |
CTTGCAGTGGGTTACCGCAA+CGG | 0.599991 | 4_2:+2942392 | None:intergenic |
ACCGCGACCTCTCTTGCAGT+GGG | 0.603590 | 4_2:+2942380 | None:intergenic |
CGCGGTCTGATCAAGATCAA+CGG | 0.609302 | 4_2:-2942363 | Msa0584030:CDS |
CTTAGCAATACTCTGACGAA+TGG | 0.614188 | 4_2:+2942200 | None:intergenic |
ATGAGGATCCGTGTGAAGGG+AGG | 0.615322 | 4_2:-2942246 | Msa0584030:CDS |
CGAAACGGTGTCTTCCGAGA+AGG | 0.622095 | 4_2:+2942280 | None:intergenic |
TGTGACCTCCTCCCTTCACA+CGG | 0.629480 | 4_2:+2942238 | None:intergenic |
CCGGAAGAAGAACGCCGTTG+CGG | 0.651449 | 4_2:-2942406 | Msa0584030:CDS |
ACGGATCCTCATATCAACGC+CGG | 0.685813 | 4_2:+2942257 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ACAGAGTAAGAAAGAGATTA+AGG | - | chr4_2:2942316-2942335 | Msa0584030:CDS | 30.0% | |
ATGGAACAAGTGCAATGCTT+TGG | - | chr4_2:2942029-2942048 | Msa0584030:CDS | 40.0% | |
CTTAGCAATACTCTGACGAA+TGG | + | chr4_2:2942261-2942280 | None:intergenic | 40.0% | |
!! | CATTCGTCAGAGTATTGCTA+AGG | - | chr4_2:2942259-2942278 | Msa0584030:CDS | 40.0% |
!! | TCAGAGTATTGCTAAGGCTT+TGG | - | chr4_2:2942265-2942284 | Msa0584030:CDS | 40.0% |
AACAAGTGCAATGCTTTGGC+CGG | - | chr4_2:2942033-2942052 | Msa0584030:CDS | 45.0% | |
GCCTGAGATTCTTCGTTTCA+AGG | - | chr4_2:2942139-2942158 | Msa0584030:CDS | 45.0% | |
GCCTTGAAACGAAGAATCTC+AGG | + | chr4_2:2942143-2942162 | None:intergenic | 45.0% | |
TACGAACCAATCCTCCTTCT+CGG | - | chr4_2:2942164-2942183 | Msa0584030:CDS | 45.0% | |
TGATATGAGGATCCGTGTGA+AGG | - | chr4_2:2942208-2942227 | Msa0584030:CDS | 45.0% | |
GATATGAGGATCCGTGTGAA+GGG | - | chr4_2:2942209-2942228 | Msa0584030:CDS | 45.0% | |
TGTGAGCCTAAGAAGTTTGG+TGG | - | chr4_2:2942389-2942408 | Msa0584030:CDS | 45.0% | |
CGCGGTCTGATCAAGATCAA+CGG | - | chr4_2:2942095-2942114 | Msa0584030:CDS | 50.0% | |
TCAGGCTCAACCAGTTCGAT+TGG | + | chr4_2:2942125-2942144 | None:intergenic | 50.0% | |
TGTCTTCCGAGAAGGAGGAT+TGG | + | chr4_2:2942173-2942192 | None:intergenic | 50.0% | |
TCATATCAACGCCGGCGAAA+CGG | + | chr4_2:2942196-2942215 | None:intergenic | 50.0% | |
ACGGATCCTCATATCAACGC+CGG | + | chr4_2:2942204-2942223 | None:intergenic | 50.0% | |
TTCTTAGGCTCACAGCGTCT+AGG | + | chr4_2:2942383-2942402 | None:intergenic | 50.0% | |
CGCTGTGAGCCTAAGAAGTT+TGG | - | chr4_2:2942386-2942405 | Msa0584030:CDS | 50.0% | |
CCACGACCACCAAACTTCTT+AGG | + | chr4_2:2942398-2942417 | None:intergenic | 50.0% | |
! | CCTAAGAAGTTTGGTGGTCG+TGG | - | chr4_2:2942395-2942414 | Msa0584030:CDS | 50.0% |
!! | CTTGCAGTGGGTTACCGCAA+CGG | + | chr4_2:2942069-2942088 | None:intergenic | 55.0% |
CAACGGCTGTCCAATCGAAC+TGG | - | chr4_2:2942112-2942131 | Msa0584030:CDS | 55.0% | |
AACGGTGTCTTCCGAGAAGG+AGG | + | chr4_2:2942178-2942197 | None:intergenic | 55.0% | |
CGAAACGGTGTCTTCCGAGA+AGG | + | chr4_2:2942181-2942200 | None:intergenic | 55.0% | |
!! | GTTTCGCCGGCGTTGATATG+AGG | - | chr4_2:2942195-2942214 | Msa0584030:CDS | 55.0% |
ATGAGGATCCGTGTGAAGGG+AGG | - | chr4_2:2942212-2942231 | Msa0584030:CDS | 55.0% | |
TGTGACCTCCTCCCTTCACA+CGG | + | chr4_2:2942223-2942242 | None:intergenic | 55.0% | |
CCGCAACGGCGTTCTTCTTC+CGG | + | chr4_2:2942055-2942074 | None:intergenic | 60.0% | |
CCGGAAGAAGAACGCCGTTG+CGG | - | chr4_2:2942052-2942071 | Msa0584030:CDS | 60.0% | |
GCGGTAACCCACTGCAAGAG+AGG | - | chr4_2:2942071-2942090 | Msa0584030:CDS | 60.0% | |
ACCCACTGCAAGAGAGGTCG+CGG | - | chr4_2:2942077-2942096 | Msa0584030:CDS | 60.0% | |
ACCGCGACCTCTCTTGCAGT+GGG | + | chr4_2:2942081-2942100 | None:intergenic | 60.0% | |
CTCGGAAGACACCGTTTCGC+CGG | - | chr4_2:2942182-2942201 | Msa0584030:CDS | 60.0% | |
AGGATCCGTGTGAAGGGAGG+AGG | - | chr4_2:2942215-2942234 | Msa0584030:CDS | 60.0% | |
GACCGCGACCTCTCTTGCAG+TGG | + | chr4_2:2942082-2942101 | None:intergenic | 65.0% | |
GTGGTCGTGGTGCTCGTGCT+AGG | - | chr4_2:2942408-2942427 | Msa0584030:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 2942029 | 2942451 | 2942029 | ID=Msa0584030;Name=Msa0584030 |
chr4_2 | mRNA | 2942029 | 2942451 | 2942029 | ID=Msa0584030-mRNA-1;Parent=Msa0584030;Name=Msa0584030-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|140 |
chr4_2 | exon | 2942029 | 2942451 | 2942029 | ID=Msa0584030-mRNA-1:exon:846;Parent=Msa0584030-mRNA-1 |
chr4_2 | CDS | 2942029 | 2942451 | 2942029 | ID=Msa0584030-mRNA-1:cds;Parent=Msa0584030-mRNA-1 |
Gene Sequence |
Protein sequence |