Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166570 | XP_013468487.1 | 99.390 | 164 | 1 | 0 | 1 | 164 | 1 | 164 | 4.20e-116 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166570 | sp|Q9FDZ9|RL212_ARATH | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 2.56e-100 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166570 | A0A2K3LGM4 | 99.390 | 164 | 1 | 0 | 1 | 164 | 1 | 164 | 2.01e-116 | 335 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1166570 | 0.835457 | 1.659553e-56 | -8.615850e-47 |
| Msa0003330 | Msa1166570 | 0.820345 | 7.205225e-53 | -8.615850e-47 |
| Msa0003360 | Msa1166570 | 0.834185 | 3.469015e-56 | -8.615850e-47 |
| Msa0021290 | Msa1166570 | 0.806554 | 7.776266e-50 | -8.615850e-47 |
| Msa0027590 | Msa1166570 | 0.912466 | 1.885158e-83 | -8.615850e-47 |
| Msa0040220 | Msa1166570 | 0.858418 | 8.351108e-63 | -8.615850e-47 |
| Msa0042480 | Msa1166570 | 0.871601 | 6.036070e-67 | -8.615850e-47 |
| Msa0050860 | Msa1166570 | 0.830560 | 2.741341e-55 | -8.615850e-47 |
| Msa0070840 | Msa1166570 | 0.842405 | 2.637792e-58 | -8.615850e-47 |
| Msa0072570 | Msa1166570 | 0.853864 | 1.802457e-61 | -8.615850e-47 |
| Msa0075350 | Msa1166570 | 0.885548 | 7.394369e-72 | -8.615850e-47 |
| Msa0079590 | Msa1166570 | 0.873449 | 1.458446e-67 | -8.615850e-47 |
| Msa0087910 | Msa1166570 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0094210 | Msa1166570 | 0.810649 | 1.037563e-50 | -8.615850e-47 |
| Msa0113920 | Msa1166570 | 0.843373 | 1.458604e-58 | -8.615850e-47 |
| Msa0114570 | Msa1166570 | 0.807316 | 5.365657e-50 | -8.615850e-47 |
| Msa0605890 | Msa1166570 | 0.844249 | 8.496582e-59 | -8.615850e-47 |
| Msa0619230 | Msa1166570 | 0.834703 | 2.571755e-56 | -8.615850e-47 |
| Msa0622230 | Msa1166570 | 0.802025 | 6.823855e-49 | -8.615850e-47 |
| Msa0623370 | Msa1166570 | 0.801832 | 7.475145e-49 | -8.615850e-47 |
| Msa0648620 | Msa1166570 | 0.801287 | 9.669976e-49 | -8.615850e-47 |
| Msa0648670 | Msa1166570 | 0.805457 | 1.322868e-49 | -8.615850e-47 |
| Msa0653060 | Msa1166570 | 0.847013 | 1.512955e-59 | -8.615850e-47 |
| Msa0686550 | Msa1166570 | 0.840960 | 6.347991e-58 | -8.615850e-47 |
| Msa0694400 | Msa1166570 | 0.838253 | 3.209517e-57 | -8.615850e-47 |
| Msa0704860 | Msa1166570 | 0.831433 | 1.673970e-55 | -8.615850e-47 |
| Msa0705800 | Msa1166570 | 0.889703 | 1.909939e-73 | -8.615850e-47 |
| Msa0712610 | Msa1166570 | 0.811371 | 7.238937e-51 | -8.615850e-47 |
| Msa0717380 | Msa1166570 | 0.850039 | 2.196920e-60 | -8.615850e-47 |
| Msa0752910 | Msa1166570 | 0.806450 | 8.176313e-50 | -8.615850e-47 |
| Msa0758420 | Msa1166570 | 0.848625 | 5.441591e-60 | -8.615850e-47 |
| Msa0788380 | Msa1166570 | 0.919926 | 2.440822e-87 | -8.615850e-47 |
| Msa0799830 | Msa1166570 | 0.863620 | 2.186413e-64 | -8.615850e-47 |
| Msa0822580 | Msa1166570 | 0.851161 | 1.062625e-60 | -8.615850e-47 |
| Msa0838070 | Msa1166570 | 0.863443 | 2.479841e-64 | -8.615850e-47 |
| Msa0128330 | Msa1166570 | 0.830691 | 2.546205e-55 | -8.615850e-47 |
| Msa0134580 | Msa1166570 | 0.815579 | 8.600167e-52 | -8.615850e-47 |
| Msa0138890 | Msa1166570 | 0.841739 | 3.957895e-58 | -8.615850e-47 |
| Msa0146580 | Msa1166570 | 0.825828 | 3.787744e-54 | -8.615850e-47 |
| Msa0167860 | Msa1166570 | 0.832393 | 9.700191e-56 | -8.615850e-47 |
| Msa0168320 | Msa1166570 | 0.830176 | 3.402948e-55 | -8.615850e-47 |
| Msa0174580 | Msa1166570 | 0.817856 | 2.654101e-52 | -8.615850e-47 |
| Msa0175000 | Msa1166570 | 0.829279 | 5.625045e-55 | -8.615850e-47 |
| Msa0186740 | Msa1166570 | 0.803473 | 3.428108e-49 | -8.615850e-47 |
| Msa0191450 | Msa1166570 | 0.903251 | 4.207223e-79 | -8.615850e-47 |
| Msa0191550 | Msa1166570 | 0.890636 | 8.233779e-74 | -8.615850e-47 |
| Msa0192300 | Msa1166570 | 0.822642 | 2.123747e-53 | -8.615850e-47 |
| Msa0192750 | Msa1166570 | 0.813930 | 1.994271e-51 | -8.615850e-47 |
| Msa0194940 | Msa1166570 | 0.861626 | 8.989163e-64 | -8.615850e-47 |
| Msa0195030 | Msa1166570 | 0.815031 | 1.138411e-51 | -8.615850e-47 |
| Msa0210360 | Msa1166570 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
| Msa0216200 | Msa1166570 | 0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa0233550 | Msa1166570 | 0.837121 | 6.266479e-57 | -8.615850e-47 |
| Msa0235050 | Msa1166570 | 0.821388 | 4.147175e-53 | -8.615850e-47 |
| Msa0369410 | Msa1166570 | 0.866567 | 2.594806e-65 | -8.615850e-47 |
| Msa0376890 | Msa1166570 | 0.855122 | 7.795766e-62 | -8.615850e-47 |
| Msa0377520 | Msa1166570 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0426090 | Msa1166570 | 0.907631 | 4.110838e-81 | -8.615850e-47 |
| Msa0426250 | Msa1166570 | 0.874071 | 8.994634e-68 | -8.615850e-47 |
| Msa0438960 | Msa1166570 | 0.800053 | 1.725892e-48 | -8.615850e-47 |
| Msa0463520 | Msa1166570 | 0.845098 | 5.018613e-59 | -8.615850e-47 |
| Msa0471880 | Msa1166570 | 0.857310 | 1.781044e-62 | -8.615850e-47 |
| Msa0472480 | Msa1166570 | 0.909511 | 5.256371e-82 | -8.615850e-47 |
| Msa0475810 | Msa1166570 | 0.857825 | 1.253555e-62 | -8.615850e-47 |
| Msa0481520 | Msa1166570 | 0.871436 | 6.845002e-67 | -8.615850e-47 |
| Msa0481850 | Msa1166570 | 0.800576 | 1.350629e-48 | -8.615850e-47 |
| Msa0482560 | Msa1166570 | 0.825308 | 5.030831e-54 | -8.615850e-47 |
| Msa1037290 | Msa1166570 | 0.902524 | 8.874964e-79 | -8.615850e-47 |
| Msa1040160 | Msa1166570 | 0.885978 | 5.100838e-72 | -8.615850e-47 |
| Msa1041680 | Msa1166570 | 0.998403 | 4.565567e-264 | -8.615850e-47 |
| Msa1042100 | Msa1166570 | 0.869631 | 2.678953e-66 | -8.615850e-47 |
| Msa1054280 | Msa1166570 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa1078870 | Msa1166570 | 0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa1078980 | Msa1166570 | 0.837334 | 5.528000e-57 | -8.615850e-47 |
| Msa1082170 | Msa1166570 | 0.856050 | 4.179300e-62 | -8.615850e-47 |
| Msa1083370 | Msa1166570 | 0.879986 | 7.956173e-70 | -8.615850e-47 |
| Msa1096900 | Msa1166570 | 0.814133 | 1.799092e-51 | -8.615850e-47 |
| Msa0239420 | Msa1166570 | 0.822355 | 2.476504e-53 | -8.615850e-47 |
| Msa0265250 | Msa1166570 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0281370 | Msa1166570 | 0.835721 | 1.422553e-56 | -8.615850e-47 |
| Msa0297830 | Msa1166570 | 0.859699 | 3.452246e-63 | -8.615850e-47 |
| Msa0298870 | Msa1166570 | 0.849888 | 2.421585e-60 | -8.615850e-47 |
| Msa0301220 | Msa1166570 | 0.864511 | 1.153378e-64 | -8.615850e-47 |
| Msa0301250 | Msa1166570 | 0.822197 | 2.693865e-53 | -8.615850e-47 |
| Msa0313060 | Msa1166570 | 0.826674 | 2.383670e-54 | -8.615850e-47 |
| Msa0313520 | Msa1166570 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa0315430 | Msa1166570 | 0.836179 | 1.089197e-56 | -8.615850e-47 |
| Msa0321270 | Msa1166570 | 0.810044 | 1.401959e-50 | -8.615850e-47 |
| Msa0335840 | Msa1166570 | 0.870290 | 1.631993e-66 | -8.615850e-47 |
| Msa0346090 | Msa1166570 | 0.809371 | 1.955495e-50 | -8.615850e-47 |
| Msa1116940 | Msa1166570 | 0.826916 | 2.086558e-54 | -8.615850e-47 |
| Msa1126520 | Msa1166570 | 0.857597 | 1.464600e-62 | -8.615850e-47 |
| Msa1164150 | Msa1166570 | 0.900310 | 8.324160e-78 | -8.615850e-47 |
| Msa1165640 | Msa1166570 | 0.803867 | 2.839548e-49 | -8.615850e-47 |
| Msa1166570 | Msa1167540 | 0.814122 | 1.809486e-51 | -8.615850e-47 |
| Msa1166570 | Msa1167550 | 0.811100 | 8.287338e-51 | -8.615850e-47 |
| Msa1166570 | Msa1169180 | 0.825937 | 3.569953e-54 | -8.615850e-47 |
| Msa1166570 | Msa1180000 | 0.858933 | 5.860197e-63 | -8.615850e-47 |
| Msa1166570 | Msa1186030 | 0.874149 | 8.463698e-68 | -8.615850e-47 |
| Msa1166570 | Msa1206240 | 0.846455 | 2.149482e-59 | -8.615850e-47 |
| Msa1166570 | Msa1218170 | 0.868360 | 6.917301e-66 | -8.615850e-47 |
| Msa1166570 | Msa1237040 | 0.858357 | 8.710689e-63 | -8.615850e-47 |
| Msa1166570 | Msa1240270 | 0.863140 | 3.078878e-64 | -8.615850e-47 |
| Msa1166570 | Msa1258540 | 0.870111 | 1.867568e-66 | -8.615850e-47 |
| Msa1166570 | Msa1270640 | 0.846903 | 1.621156e-59 | -8.615850e-47 |
| Msa1166570 | Msa1270710 | 0.843521 | 1.331218e-58 | -8.615850e-47 |
| Msa1166570 | Msa1278130 | 0.845427 | 4.089475e-59 | -8.615850e-47 |
| Msa1166570 | Msa1311400 | 0.863573 | 2.260444e-64 | -8.615850e-47 |
| Msa1166570 | Msa1317390 | 0.840633 | 7.729576e-58 | -8.615850e-47 |
| Msa1166570 | Msa1351020 | 0.828467 | 8.846300e-55 | -8.615850e-47 |
| Msa1166570 | Msa1356790 | 0.804346 | 2.257783e-49 | -8.615850e-47 |
| Msa1166570 | Msa1358710 | 0.817107 | 3.915025e-52 | -8.615850e-47 |
| Msa1166570 | Msa1363910 | 0.821748 | 3.423942e-53 | -8.615850e-47 |
| Msa1166570 | Msa1364110 | 0.838103 | 3.507782e-57 | -8.615850e-47 |
| Msa1166570 | Msa1368920 | 0.903256 | 4.185422e-79 | -8.615850e-47 |
| Msa1166570 | Msa1374240 | 0.865738 | 4.749038e-65 | -8.615850e-47 |
| Msa1166570 | Msa1385480 | 0.803901 | 2.793726e-49 | -8.615850e-47 |
| Msa1166570 | Msa1390760 | 0.831501 | 1.610660e-55 | -8.615850e-47 |
| Msa1166570 | Msa1392590 | 0.828396 | 9.199942e-55 | -8.615850e-47 |
| Msa1166570 | Msa1397100 | 0.854747 | 1.001845e-61 | -8.615850e-47 |
| Msa1166570 | Msa1403910 | 0.887727 | 1.106676e-72 | -8.615850e-47 |
| Msa1166570 | Msa1406080 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa1166570 | Msa1418770 | 0.808893 | 2.476530e-50 | -8.615850e-47 |
| Msa1166570 | Msa1426120 | 0.822404 | 2.412304e-53 | -8.615850e-47 |
| Msa1166570 | Msa1426490 | 0.803382 | 3.579696e-49 | -8.615850e-47 |
| Msa1166570 | Msa1432310 | 0.825415 | 4.745752e-54 | -8.615850e-47 |
| Msa1166570 | Msa1446410 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
| Msa1166570 | Msa1449160 | 0.854319 | 1.332670e-61 | -8.615850e-47 |
| Msa1166570 | Msa1453530 | 0.826548 | 2.554409e-54 | -8.615850e-47 |
| Msa1166570 | Msa1463570 | 0.834305 | 3.237449e-56 | -8.615850e-47 |
| Msa1166570 | Msa1465700 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa0517480 | Msa1166570 | 0.815813 | 7.626167e-52 | -8.615850e-47 |
| Msa0529900 | Msa1166570 | 0.804755 | 1.854844e-49 | -8.615850e-47 |
| Msa0540480 | Msa1166570 | 0.816862 | 4.442321e-52 | -8.615850e-47 |
| Msa0547920 | Msa1166570 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
| Msa0550420 | Msa1166570 | 0.834380 | 3.099139e-56 | -8.615850e-47 |
| Msa0573550 | Msa1166570 | 0.860591 | 1.856826e-63 | -8.615850e-47 |
| Msa0582070 | Msa1166570 | 0.858971 | 5.709587e-63 | -8.615850e-47 |
| Msa0582320 | Msa1166570 | 0.802885 | 4.536955e-49 | -8.615850e-47 |
| Msa0584030 | Msa1166570 | 0.854152 | 1.488424e-61 | -8.615850e-47 |
| Msa0596370 | Msa1166570 | 0.823151 | 1.616420e-53 | -8.615850e-47 |
| Msa0597240 | Msa1166570 | 0.862623 | 4.443638e-64 | -8.615850e-47 |
| Msa0861320 | Msa1166570 | 0.852188 | 5.439621e-61 | -8.615850e-47 |
| Msa0915540 | Msa1166570 | 0.833957 | 3.956438e-56 | -8.615850e-47 |
| Msa0929700 | Msa1166570 | 0.844165 | 8.951583e-59 | -8.615850e-47 |
| Msa0929790 | Msa1166570 | 0.810476 | 1.131271e-50 | -8.615850e-47 |
| Msa0930790 | Msa1166570 | 0.808853 | 2.524616e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166570 | MtrunA17_Chr1g0183851 | 99.390 | 164 | 1 | 0 | 1 | 164 | 1 | 164 | 3.86e-120 | 335 |
| Msa1166570 | MtrunA17_Chr7g0268461 | 98.780 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 7.14e-120 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166570 | AT1G57660.1 | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 2.61e-101 | 288 |
| Msa1166570 | AT1G57860.1 | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 2.61e-101 | 288 |
| Msa1166570 | AT1G09590.1 | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 4.66e-101 | 288 |
| Msa1166570 | AT1G09690.1 | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 4.66e-101 | 288 |
Find 74 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAACCTAGGGTTTCTTAT+TGG | 0.209419 | 7_4:-58664273 | None:intergenic |
| GGCATCTTTCTTCTCCTTCT+AGG | 0.223627 | 7_4:-58664364 | None:intergenic |
| TGAACCTAGGGTTTCTTATT+GGG | 0.253215 | 7_4:-58664272 | None:intergenic |
| ACTCTTTCTCTCGTCCATTC+AGG | 0.293911 | 7_4:+58664419 | Msa1166570:CDS |
| TGGGTATCTTTCTTCATCTA+TGG | 0.322424 | 7_4:+58665674 | Msa1166570:three_prime_UTR |
| AAACCAGGTTTAGGTCCTTC+TGG | 0.327783 | 7_4:-58665371 | None:intergenic |
| TCGGCGATTATGTCGATATC+AGG | 0.353109 | 7_4:+58664488 | Msa1166570:CDS |
| AGGACCTAAACCTGGTTTCA+TGG | 0.367201 | 7_4:+58665376 | Msa1166570:CDS |
| TGATGTGGTTAATGATCTTA+AGG | 0.381458 | 7_4:+58665439 | Msa1166570:CDS |
| GGTTAACGGTGCCGTTCATA+AGG | 0.392360 | 7_4:+58664510 | Msa1166570:CDS |
| TCAACCATGAAACCAGGTTT+AGG | 0.394105 | 7_4:-58665380 | None:intergenic |
| TTAACCACATCATATGGAAT+TGG | 0.408404 | 7_4:-58665428 | None:intergenic |
| CTCAACACCAATAGCACGTT+TGG | 0.409541 | 7_4:-58664584 | None:intergenic |
| CTCTCGTCCATTCAGGAAGA+AGG | 0.411770 | 7_4:+58664426 | Msa1166570:CDS |
| AACTCCTCGGTGCACCTAGA+TGG | 0.414621 | 7_4:-58665269 | None:intergenic |
| GACATAATCGCCGATGTGAT+AGG | 0.419105 | 7_4:-58664479 | None:intergenic |
| GGTTTATTCGTATTGCTTGT+GGG | 0.420928 | 7_4:+58665630 | Msa1166570:three_prime_UTR |
| AGATCATTAACCACATCATA+TGG | 0.425684 | 7_4:-58665434 | None:intergenic |
| ATGGGCGTACCGGTCGTGTC+TGG | 0.430669 | 7_4:+58664554 | Msa1166570:CDS |
| TTCGTATTGCTTGTGGGTCG+TGG | 0.438615 | 7_4:+58665636 | Msa1166570:three_prime_UTR |
| GCATCTTTCTTCTCCTTCTA+GGG | 0.447415 | 7_4:-58664363 | None:intergenic |
| ATTGTACCCTTCTTCCTGAA+TGG | 0.450869 | 7_4:-58664433 | None:intergenic |
| AGGTTAGGAACAAGATTCTC+AGG | 0.451952 | 7_4:+58665213 | Msa1166570:intron |
| AAACCTGGTTTCATGGTTGA+AGG | 0.456376 | 7_4:+58665383 | Msa1166570:CDS |
| CATTCTTAATCTTCCTCAAA+CGG | 0.463824 | 7_4:-58665292 | None:intergenic |
| AACGTTACCAAACGTGCTAT+TGG | 0.472288 | 7_4:+58664577 | Msa1166570:CDS |
| AGGTCCTTCTGGCTTGCGCT+TGG | 0.474164 | 7_4:-58665360 | None:intergenic |
| TTTATGTATGTATGAACCTA+GGG | 0.474284 | 7_4:-58664284 | None:intergenic |
| GATTAAGAATGATCAACTTA+AGG | 0.476396 | 7_4:+58665304 | Msa1166570:CDS |
| TGGTTTATTCGTATTGCTTG+TGG | 0.484408 | 7_4:+58665629 | Msa1166570:three_prime_UTR |
| TGGAGCATGTTATGCCATCT+AGG | 0.488269 | 7_4:+58665255 | Msa1166570:CDS |
| TATGTCGATATCAGGGTTAA+CGG | 0.499321 | 7_4:+58664496 | Msa1166570:CDS |
| GATGTGGTTAATGATCTTAA+GGG | 0.514482 | 7_4:+58665440 | Msa1166570:CDS |
| TTTGTTGCGTTGCTGCTGAC+GGG | 0.514504 | 7_4:+58665709 | Msa1166570:three_prime_UTR |
| ATTCACTGTCTGATACGAAA+TGG | 0.515343 | 7_4:-58664323 | None:intergenic |
| CATGGTTGAAGGAGCTACAT+TGG | 0.515633 | 7_4:+58665394 | Msa1166570:CDS |
| CAAACGTGCTATTGGTGTTG+AGG | 0.526075 | 7_4:+58664585 | Msa1166570:CDS |
| AGAAAGATGCCGGCTGGTCA+TGG | 0.530667 | 7_4:+58664376 | Msa1166570:exon |
| GCACCGAGGAGTTCCGTTTG+AGG | 0.535387 | 7_4:+58665279 | Msa1166570:CDS |
| AAGTTCTACCATGGGCGTAC+CGG | 0.536603 | 7_4:+58664544 | Msa1166570:CDS |
| AAGGCTGATGCTAAGGCAAA+GGG | 0.537787 | 7_4:+58665323 | Msa1166570:CDS |
| GTTTGTTGCGTTGCTGCTGA+CGG | 0.544760 | 7_4:+58665708 | Msa1166570:three_prime_UTR |
| TCAACTTAAGGCTGATGCTA+AGG | 0.551978 | 7_4:+58665316 | Msa1166570:CDS |
| TAAGGCTGATGCTAAGGCAA+AGG | 0.552535 | 7_4:+58665322 | Msa1166570:CDS |
| GTTAACGGTGCCGTTCATAA+GGG | 0.556218 | 7_4:+58664511 | Msa1166570:CDS |
| TTTCGTATCAGACAGTGAAT+CGG | 0.557124 | 7_4:+58664326 | Msa1166570:five_prime_UTR |
| GATCTCAAACCATGACCAGC+CGG | 0.563821 | 7_4:-58664385 | None:intergenic |
| CGCCGATGTGATAGGTTCTG+AGG | 0.582425 | 7_4:-58664471 | None:intergenic |
| TAACATGCTCCACTCGAACA+TGG | 0.582558 | 7_4:-58665244 | None:intergenic |
| AGGAGAAGAAAGATGCCGGC+TGG | 0.584433 | 7_4:+58664370 | Msa1166570:exon |
| CTTCCTCAAACGGAACTCCT+CGG | 0.593955 | 7_4:-58665282 | None:intergenic |
| AGCACCAAGCGCAAGCCAGA+AGG | 0.595144 | 7_4:+58665356 | Msa1166570:CDS |
| TACTCCAATTCCATATGATG+TGG | 0.596403 | 7_4:+58665424 | Msa1166570:CDS |
| TAGAAGGAGAAGAAAGATGC+CGG | 0.597264 | 7_4:+58664366 | Msa1166570:exon |
| TCTCGTCCATTCAGGAAGAA+GGG | 0.597777 | 7_4:+58664427 | Msa1166570:CDS |
| GTGATAGGTTCTGAGGTAAG+TGG | 0.598261 | 7_4:-58664464 | None:intergenic |
| GGTAACGTTCCAGACACGAC+CGG | 0.599652 | 7_4:-58664563 | None:intergenic |
| GGTTCTGAGGTAAGTGGCGA+GGG | 0.600826 | 7_4:-58664458 | None:intergenic |
| AAAGCCCAATAAGAAACCCT+AGG | 0.603225 | 7_4:+58664268 | Msa1166570:five_prime_UTR |
| CGCCCATGGTAGAACTTGTG+TGG | 0.607884 | 7_4:-58664538 | None:intergenic |
| GCTCCTTCAACCATGAAACC+AGG | 0.609967 | 7_4:-58665386 | None:intergenic |
| TGCCACACAAGTTCTACCAT+GGG | 0.615951 | 7_4:+58664536 | Msa1166570:CDS |
| AGGTTCTGAGGTAAGTGGCG+AGG | 0.615968 | 7_4:-58664459 | None:intergenic |
| CGTGGCACTGATCGTTACGA+TGG | 0.616626 | 7_4:+58665654 | Msa1166570:three_prime_UTR |
| AGACACGACCGGTACGCCCA+TGG | 0.619384 | 7_4:-58664552 | None:intergenic |
| ATGCCACACAAGTTCTACCA+TGG | 0.619578 | 7_4:+58664535 | Msa1166570:CDS |
| CGGCGATTATGTCGATATCA+GGG | 0.624782 | 7_4:+58664489 | Msa1166570:CDS |
| AAGCCAGAAGGACCTAAACC+TGG | 0.625100 | 7_4:+58665368 | Msa1166570:CDS |
| GTGGTTAATGATCTTAAGGG+AGG | 0.627017 | 7_4:+58665443 | Msa1166570:CDS |
| GTGTGGCATACCCTTATGAA+CGG | 0.627528 | 7_4:-58664521 | None:intergenic |
| GTGGCACTGATCGTTACGAT+GGG | 0.641644 | 7_4:+58665655 | Msa1166570:three_prime_UTR |
| GAAGAGAATCCATGTTCGAG+TGG | 0.642302 | 7_4:+58665235 | Msa1166570:CDS |
| TACCTCAGAACCTATCACAT+CGG | 0.680253 | 7_4:+58664469 | Msa1166570:CDS |
| TATGCCATCTAGGTGCACCG+AGG | 0.784253 | 7_4:+58665265 | Msa1166570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGATTTATTGTATTTT+AGG | + | chr7_4:58664727-58664746 | Msa1166570:intron | 10.0% |
| !!! | TATTGATTTATTGTATTTTA+GGG | + | chr7_4:58664728-58664747 | Msa1166570:intron | 10.0% |
| !!! | ATTATATCTTTTTAATAATG+TGG | + | chr7_4:58665609-58665628 | Msa1166570:three_prime_UTR | 10.0% |
| !!! | TTATTGATTTATTGTATTTT+AGG | + | chr7_4:58664727-58664746 | Msa1166570:intron | 10.0% |
| !!! | TATTGATTTATTGTATTTTA+GGG | + | chr7_4:58664728-58664747 | Msa1166570:intron | 10.0% |
| !!! | ATTATATCTTTTTAATAATG+TGG | + | chr7_4:58665609-58665628 | Msa1166570:three_prime_UTR | 10.0% |
| !! | AAATGAATTAAGTAAGTATT+TGG | + | chr7_4:58664909-58664928 | Msa1166570:intron | 15.0% |
| !! | TATAATTACATTGATCAAAT+GGG | - | chr7_4:58665090-58665109 | None:intergenic | 15.0% |
| !! | ATATAATTACATTGATCAAA+TGG | - | chr7_4:58665091-58665110 | None:intergenic | 15.0% |
| !!! | ATTATATGTTGTTATTTATC+TGG | + | chr7_4:58665104-58665123 | Msa1166570:intron | 15.0% |
| !! | AAATGAATTAAGTAAGTATT+TGG | + | chr7_4:58664909-58664928 | Msa1166570:intron | 15.0% |
| !! | TATAATTACATTGATCAAAT+GGG | - | chr7_4:58665090-58665109 | None:intergenic | 15.0% |
| !! | ATATAATTACATTGATCAAA+TGG | - | chr7_4:58665091-58665110 | None:intergenic | 15.0% |
| !!! | ATTATATGTTGTTATTTATC+TGG | + | chr7_4:58665104-58665123 | Msa1166570:intron | 15.0% |
| !!! | TATTGAAATATTGCTATTTG+TGG | + | chr7_4:58665187-58665206 | Msa1166570:intron | 20.0% |
| !!! | TATTGAAATATTGCTATTTG+TGG | + | chr7_4:58665187-58665206 | Msa1166570:intron | 20.0% |
| !!! | TCTATTTGCTTTTTGTCATT+GGG | - | chr7_4:58664248-58664267 | None:intergenic | 25.0% |
| !!! | TTCTATTTGCTTTTTGTCAT+TGG | - | chr7_4:58664249-58664268 | None:intergenic | 25.0% |
| ! | TTTATGTATGTATGAACCTA+GGG | - | chr7_4:58664287-58664306 | None:intergenic | 25.0% |
| !! | TTTTATGTATGTATGAACCT+AGG | - | chr7_4:58664288-58664307 | None:intergenic | 25.0% |
| ! | AAAACCACAGAACTAAAATT+CGG | - | chr7_4:58664647-58664666 | None:intergenic | 25.0% |
| !! | TGTGTGCTTTAATTACATTT+TGG | + | chr7_4:58664773-58664792 | Msa1166570:intron | 25.0% |
| !! | GGATTTTGTAAATTTACTTG+TGG | + | chr7_4:58664930-58664949 | Msa1166570:intron | 25.0% |
| ! | GATTAAGAATGATCAACTTA+AGG | + | chr7_4:58665304-58665323 | Msa1166570:CDS | 25.0% |
| ! | AAGACAGTCTAAAAAACATT+AGG | - | chr7_4:58665489-58665508 | None:intergenic | 25.0% |
| !!! | TTAGACTGTCTTATTTTGTT+TGG | + | chr7_4:58665497-58665516 | Msa1166570:three_prime_UTR | 25.0% |
| !!! | TCTATTTGCTTTTTGTCATT+GGG | - | chr7_4:58664248-58664267 | None:intergenic | 25.0% |
| !!! | TTCTATTTGCTTTTTGTCAT+TGG | - | chr7_4:58664249-58664268 | None:intergenic | 25.0% |
| ! | TTTATGTATGTATGAACCTA+GGG | - | chr7_4:58664287-58664306 | None:intergenic | 25.0% |
| !! | TTTTATGTATGTATGAACCT+AGG | - | chr7_4:58664288-58664307 | None:intergenic | 25.0% |
| ! | AAAACCACAGAACTAAAATT+CGG | - | chr7_4:58664647-58664666 | None:intergenic | 25.0% |
| !! | TGTGTGCTTTAATTACATTT+TGG | + | chr7_4:58664773-58664792 | Msa1166570:intron | 25.0% |
| !! | GGATTTTGTAAATTTACTTG+TGG | + | chr7_4:58664930-58664949 | Msa1166570:intron | 25.0% |
| ! | GATTAAGAATGATCAACTTA+AGG | + | chr7_4:58665304-58665323 | Msa1166570:CDS | 25.0% |
| ! | AAGACAGTCTAAAAAACATT+AGG | - | chr7_4:58665489-58665508 | None:intergenic | 25.0% |
| !!! | TTAGACTGTCTTATTTTGTT+TGG | + | chr7_4:58665497-58665516 | Msa1166570:three_prime_UTR | 25.0% |
| !!! | ATTTCCGAATTTTAGTTCTG+TGG | + | chr7_4:58664640-58664659 | Msa1166570:intron | 30.0% |
| ! | AGGGTTTATGATTTTCTATG+CGG | + | chr7_4:58664747-58664766 | Msa1166570:intron | 30.0% |
| !! | AATATTGCTATTTGTGGTTC+AGG | + | chr7_4:58665193-58665212 | Msa1166570:intron | 30.0% |
| CATTCTTAATCTTCCTCAAA+CGG | - | chr7_4:58665295-58665314 | None:intergenic | 30.0% | |
| TTAACCACATCATATGGAAT+TGG | - | chr7_4:58665431-58665450 | None:intergenic | 30.0% | |
| AGATCATTAACCACATCATA+TGG | - | chr7_4:58665437-58665456 | None:intergenic | 30.0% | |
| TGATGTGGTTAATGATCTTA+AGG | + | chr7_4:58665439-58665458 | Msa1166570:CDS | 30.0% | |
| GATGTGGTTAATGATCTTAA+GGG | + | chr7_4:58665440-58665459 | Msa1166570:CDS | 30.0% | |
| ! | TTTTGTGAAATGTGAAATCG+AGG | + | chr7_4:58665522-58665541 | Msa1166570:three_prime_UTR | 30.0% |
| !!! | ATTTCCGAATTTTAGTTCTG+TGG | + | chr7_4:58664640-58664659 | Msa1166570:intron | 30.0% |
| ! | AGGGTTTATGATTTTCTATG+CGG | + | chr7_4:58664747-58664766 | Msa1166570:intron | 30.0% |
| !! | AATATTGCTATTTGTGGTTC+AGG | + | chr7_4:58665193-58665212 | Msa1166570:intron | 30.0% |
| CATTCTTAATCTTCCTCAAA+CGG | - | chr7_4:58665295-58665314 | None:intergenic | 30.0% | |
| TTAACCACATCATATGGAAT+TGG | - | chr7_4:58665431-58665450 | None:intergenic | 30.0% | |
| AGATCATTAACCACATCATA+TGG | - | chr7_4:58665437-58665456 | None:intergenic | 30.0% | |
| TGATGTGGTTAATGATCTTA+AGG | + | chr7_4:58665439-58665458 | Msa1166570:CDS | 30.0% | |
| GATGTGGTTAATGATCTTAA+GGG | + | chr7_4:58665440-58665459 | Msa1166570:CDS | 30.0% | |
| ! | TTTTGTGAAATGTGAAATCG+AGG | + | chr7_4:58665522-58665541 | Msa1166570:three_prime_UTR | 30.0% |
| TGAACCTAGGGTTTCTTATT+GGG | - | chr7_4:58664275-58664294 | None:intergenic | 35.0% | |
| ATGAACCTAGGGTTTCTTAT+TGG | - | chr7_4:58664276-58664295 | None:intergenic | 35.0% | |
| ATTCACTGTCTGATACGAAA+TGG | - | chr7_4:58664326-58664345 | None:intergenic | 35.0% | |
| TTTCGTATCAGACAGTGAAT+CGG | + | chr7_4:58664326-58664345 | Msa1166570:five_prime_UTR | 35.0% | |
| TATGTCGATATCAGGGTTAA+CGG | + | chr7_4:58664496-58664515 | Msa1166570:CDS | 35.0% | |
| TGTTTGCAAGAGAGTTTATC+AGG | + | chr7_4:58665139-58665158 | Msa1166570:intron | 35.0% | |
| TACTCCAATTCCATATGATG+TGG | + | chr7_4:58665424-58665443 | Msa1166570:CDS | 35.0% | |
| TGGTTTATTCGTATTGCTTG+TGG | + | chr7_4:58665629-58665648 | Msa1166570:three_prime_UTR | 35.0% | |
| GGTTTATTCGTATTGCTTGT+GGG | + | chr7_4:58665630-58665649 | Msa1166570:three_prime_UTR | 35.0% | |
| TGGGTATCTTTCTTCATCTA+TGG | + | chr7_4:58665674-58665693 | Msa1166570:three_prime_UTR | 35.0% | |
| TGAACCTAGGGTTTCTTATT+GGG | - | chr7_4:58664275-58664294 | None:intergenic | 35.0% | |
| ATGAACCTAGGGTTTCTTAT+TGG | - | chr7_4:58664276-58664295 | None:intergenic | 35.0% | |
| ATTCACTGTCTGATACGAAA+TGG | - | chr7_4:58664326-58664345 | None:intergenic | 35.0% | |
| TTTCGTATCAGACAGTGAAT+CGG | + | chr7_4:58664326-58664345 | Msa1166570:five_prime_UTR | 35.0% | |
| TATGTCGATATCAGGGTTAA+CGG | + | chr7_4:58664496-58664515 | Msa1166570:CDS | 35.0% | |
| TGTTTGCAAGAGAGTTTATC+AGG | + | chr7_4:58665139-58665158 | Msa1166570:intron | 35.0% | |
| TACTCCAATTCCATATGATG+TGG | + | chr7_4:58665424-58665443 | Msa1166570:CDS | 35.0% | |
| TGGTTTATTCGTATTGCTTG+TGG | + | chr7_4:58665629-58665648 | Msa1166570:three_prime_UTR | 35.0% | |
| GGTTTATTCGTATTGCTTGT+GGG | + | chr7_4:58665630-58665649 | Msa1166570:three_prime_UTR | 35.0% | |
| TGGGTATCTTTCTTCATCTA+TGG | + | chr7_4:58665674-58665693 | Msa1166570:three_prime_UTR | 35.0% | |
| !!! | TTGCTTTTTGTCATTGGGCT+GGG | - | chr7_4:58664243-58664262 | None:intergenic | 40.0% |
| !!! | TTTGCTTTTTGTCATTGGGC+TGG | - | chr7_4:58664244-58664263 | None:intergenic | 40.0% |
| AAAGCCCAATAAGAAACCCT+AGG | + | chr7_4:58664268-58664287 | Msa1166570:five_prime_UTR | 40.0% | |
| GCATCTTTCTTCTCCTTCTA+GGG | - | chr7_4:58664366-58664385 | None:intergenic | 40.0% | |
| TAGAAGGAGAAGAAAGATGC+CGG | + | chr7_4:58664366-58664385 | Msa1166570:exon | 40.0% | |
| ATTGTACCCTTCTTCCTGAA+TGG | - | chr7_4:58664436-58664455 | None:intergenic | 40.0% | |
| TACCTCAGAACCTATCACAT+CGG | + | chr7_4:58664469-58664488 | Msa1166570:CDS | 40.0% | |
| AACGTTACCAAACGTGCTAT+TGG | + | chr7_4:58664577-58664596 | Msa1166570:CDS | 40.0% | |
| ! | TGCTATTTGTGGTTCAGGTT+AGG | + | chr7_4:58665198-58665217 | Msa1166570:intron | 40.0% |
| AGGTTAGGAACAAGATTCTC+AGG | + | chr7_4:58665213-58665232 | Msa1166570:intron | 40.0% | |
| TCAACTTAAGGCTGATGCTA+AGG | + | chr7_4:58665316-58665335 | Msa1166570:CDS | 40.0% | |
| TCAACCATGAAACCAGGTTT+AGG | - | chr7_4:58665383-58665402 | None:intergenic | 40.0% | |
| AAACCTGGTTTCATGGTTGA+AGG | + | chr7_4:58665383-58665402 | Msa1166570:CDS | 40.0% | |
| GTGGTTAATGATCTTAAGGG+AGG | + | chr7_4:58665443-58665462 | Msa1166570:CDS | 40.0% | |
| !!! | TTGCTTTTTGTCATTGGGCT+GGG | - | chr7_4:58664243-58664262 | None:intergenic | 40.0% |
| !!! | TTTGCTTTTTGTCATTGGGC+TGG | - | chr7_4:58664244-58664263 | None:intergenic | 40.0% |
| AAAGCCCAATAAGAAACCCT+AGG | + | chr7_4:58664268-58664287 | Msa1166570:five_prime_UTR | 40.0% | |
| GCATCTTTCTTCTCCTTCTA+GGG | - | chr7_4:58664366-58664385 | None:intergenic | 40.0% | |
| TAGAAGGAGAAGAAAGATGC+CGG | + | chr7_4:58664366-58664385 | Msa1166570:exon | 40.0% | |
| ATTGTACCCTTCTTCCTGAA+TGG | - | chr7_4:58664436-58664455 | None:intergenic | 40.0% | |
| TACCTCAGAACCTATCACAT+CGG | + | chr7_4:58664469-58664488 | Msa1166570:CDS | 40.0% | |
| AACGTTACCAAACGTGCTAT+TGG | + | chr7_4:58664577-58664596 | Msa1166570:CDS | 40.0% | |
| ! | TGCTATTTGTGGTTCAGGTT+AGG | + | chr7_4:58665198-58665217 | Msa1166570:intron | 40.0% |
| AGGTTAGGAACAAGATTCTC+AGG | + | chr7_4:58665213-58665232 | Msa1166570:intron | 40.0% | |
| TCAACTTAAGGCTGATGCTA+AGG | + | chr7_4:58665316-58665335 | Msa1166570:CDS | 40.0% | |
| TCAACCATGAAACCAGGTTT+AGG | - | chr7_4:58665383-58665402 | None:intergenic | 40.0% | |
| AAACCTGGTTTCATGGTTGA+AGG | + | chr7_4:58665383-58665402 | Msa1166570:CDS | 40.0% | |
| GTGGTTAATGATCTTAAGGG+AGG | + | chr7_4:58665443-58665462 | Msa1166570:CDS | 40.0% | |
| GGCATCTTTCTTCTCCTTCT+AGG | - | chr7_4:58664367-58664386 | None:intergenic | 45.0% | |
| ACTCTTTCTCTCGTCCATTC+AGG | + | chr7_4:58664419-58664438 | Msa1166570:CDS | 45.0% | |
| TCTCGTCCATTCAGGAAGAA+GGG | + | chr7_4:58664427-58664446 | Msa1166570:CDS | 45.0% | |
| !! | GTGATAGGTTCTGAGGTAAG+TGG | - | chr7_4:58664467-58664486 | None:intergenic | 45.0% |
| GACATAATCGCCGATGTGAT+AGG | - | chr7_4:58664482-58664501 | None:intergenic | 45.0% | |
| TCGGCGATTATGTCGATATC+AGG | + | chr7_4:58664488-58664507 | Msa1166570:CDS | 45.0% | |
| CGGCGATTATGTCGATATCA+GGG | + | chr7_4:58664489-58664508 | Msa1166570:CDS | 45.0% | |
| !! | GTTAACGGTGCCGTTCATAA+GGG | + | chr7_4:58664511-58664530 | Msa1166570:CDS | 45.0% |
| GTGTGGCATACCCTTATGAA+CGG | - | chr7_4:58664524-58664543 | None:intergenic | 45.0% | |
| ATGCCACACAAGTTCTACCA+TGG | + | chr7_4:58664535-58664554 | Msa1166570:CDS | 45.0% | |
| TGCCACACAAGTTCTACCAT+GGG | + | chr7_4:58664536-58664555 | Msa1166570:CDS | 45.0% | |
| CTCAACACCAATAGCACGTT+TGG | - | chr7_4:58664587-58664606 | None:intergenic | 45.0% | |
| !! | CAAACGTGCTATTGGTGTTG+AGG | + | chr7_4:58664585-58664604 | Msa1166570:CDS | 45.0% |
| GAAGAGAATCCATGTTCGAG+TGG | + | chr7_4:58665235-58665254 | Msa1166570:CDS | 45.0% | |
| TAACATGCTCCACTCGAACA+TGG | - | chr7_4:58665247-58665266 | None:intergenic | 45.0% | |
| TGGAGCATGTTATGCCATCT+AGG | + | chr7_4:58665255-58665274 | Msa1166570:CDS | 45.0% | |
| TAAGGCTGATGCTAAGGCAA+AGG | + | chr7_4:58665322-58665341 | Msa1166570:CDS | 45.0% | |
| AAGGCTGATGCTAAGGCAAA+GGG | + | chr7_4:58665323-58665342 | Msa1166570:CDS | 45.0% | |
| AAACCAGGTTTAGGTCCTTC+TGG | - | chr7_4:58665374-58665393 | None:intergenic | 45.0% | |
| AGGACCTAAACCTGGTTTCA+TGG | + | chr7_4:58665376-58665395 | Msa1166570:CDS | 45.0% | |
| CATGGTTGAAGGAGCTACAT+TGG | + | chr7_4:58665394-58665413 | Msa1166570:CDS | 45.0% | |
| GGCATCTTTCTTCTCCTTCT+AGG | - | chr7_4:58664367-58664386 | None:intergenic | 45.0% | |
| ACTCTTTCTCTCGTCCATTC+AGG | + | chr7_4:58664419-58664438 | Msa1166570:CDS | 45.0% | |
| TCTCGTCCATTCAGGAAGAA+GGG | + | chr7_4:58664427-58664446 | Msa1166570:CDS | 45.0% | |
| !! | GTGATAGGTTCTGAGGTAAG+TGG | - | chr7_4:58664467-58664486 | None:intergenic | 45.0% |
| GACATAATCGCCGATGTGAT+AGG | - | chr7_4:58664482-58664501 | None:intergenic | 45.0% | |
| TCGGCGATTATGTCGATATC+AGG | + | chr7_4:58664488-58664507 | Msa1166570:CDS | 45.0% | |
| CGGCGATTATGTCGATATCA+GGG | + | chr7_4:58664489-58664508 | Msa1166570:CDS | 45.0% | |
| !! | GTTAACGGTGCCGTTCATAA+GGG | + | chr7_4:58664511-58664530 | Msa1166570:CDS | 45.0% |
| GTGTGGCATACCCTTATGAA+CGG | - | chr7_4:58664524-58664543 | None:intergenic | 45.0% | |
| ATGCCACACAAGTTCTACCA+TGG | + | chr7_4:58664535-58664554 | Msa1166570:CDS | 45.0% | |
| TGCCACACAAGTTCTACCAT+GGG | + | chr7_4:58664536-58664555 | Msa1166570:CDS | 45.0% | |
| CTCAACACCAATAGCACGTT+TGG | - | chr7_4:58664587-58664606 | None:intergenic | 45.0% | |
| !! | CAAACGTGCTATTGGTGTTG+AGG | + | chr7_4:58664585-58664604 | Msa1166570:CDS | 45.0% |
| GAAGAGAATCCATGTTCGAG+TGG | + | chr7_4:58665235-58665254 | Msa1166570:CDS | 45.0% | |
| TAACATGCTCCACTCGAACA+TGG | - | chr7_4:58665247-58665266 | None:intergenic | 45.0% | |
| TGGAGCATGTTATGCCATCT+AGG | + | chr7_4:58665255-58665274 | Msa1166570:CDS | 45.0% | |
| TAAGGCTGATGCTAAGGCAA+AGG | + | chr7_4:58665322-58665341 | Msa1166570:CDS | 45.0% | |
| AAGGCTGATGCTAAGGCAAA+GGG | + | chr7_4:58665323-58665342 | Msa1166570:CDS | 45.0% | |
| AAACCAGGTTTAGGTCCTTC+TGG | - | chr7_4:58665374-58665393 | None:intergenic | 45.0% | |
| AGGACCTAAACCTGGTTTCA+TGG | + | chr7_4:58665376-58665395 | Msa1166570:CDS | 45.0% | |
| CATGGTTGAAGGAGCTACAT+TGG | + | chr7_4:58665394-58665413 | Msa1166570:CDS | 45.0% | |
| TGCGACGCAAAAACCCTAGA+AGG | + | chr7_4:58664350-58664369 | Msa1166570:five_prime_UTR | 50.0% | |
| GATCTCAAACCATGACCAGC+CGG | - | chr7_4:58664388-58664407 | None:intergenic | 50.0% | |
| CTCTCGTCCATTCAGGAAGA+AGG | + | chr7_4:58664426-58664445 | Msa1166570:CDS | 50.0% | |
| !! | GGTTAACGGTGCCGTTCATA+AGG | + | chr7_4:58664510-58664529 | Msa1166570:CDS | 50.0% |
| AAGTTCTACCATGGGCGTAC+CGG | + | chr7_4:58664544-58664563 | Msa1166570:CDS | 50.0% | |
| CTTCCTCAAACGGAACTCCT+CGG | - | chr7_4:58665285-58665304 | None:intergenic | 50.0% | |
| AAGCCAGAAGGACCTAAACC+TGG | + | chr7_4:58665368-58665387 | Msa1166570:CDS | 50.0% | |
| GCTCCTTCAACCATGAAACC+AGG | - | chr7_4:58665389-58665408 | None:intergenic | 50.0% | |
| TTCGTATTGCTTGTGGGTCG+TGG | + | chr7_4:58665636-58665655 | Msa1166570:three_prime_UTR | 50.0% | |
| !! | GTGGCACTGATCGTTACGAT+GGG | + | chr7_4:58665655-58665674 | Msa1166570:three_prime_UTR | 50.0% |
| ! | GTTTGTTGCGTTGCTGCTGA+CGG | + | chr7_4:58665708-58665727 | Msa1166570:three_prime_UTR | 50.0% |
| TTTGTTGCGTTGCTGCTGAC+GGG | + | chr7_4:58665709-58665728 | Msa1166570:three_prime_UTR | 50.0% | |
| TGCGACGCAAAAACCCTAGA+AGG | + | chr7_4:58664350-58664369 | Msa1166570:five_prime_UTR | 50.0% | |
| GATCTCAAACCATGACCAGC+CGG | - | chr7_4:58664388-58664407 | None:intergenic | 50.0% | |
| CTCTCGTCCATTCAGGAAGA+AGG | + | chr7_4:58664426-58664445 | Msa1166570:CDS | 50.0% | |
| !! | GGTTAACGGTGCCGTTCATA+AGG | + | chr7_4:58664510-58664529 | Msa1166570:CDS | 50.0% |
| AAGTTCTACCATGGGCGTAC+CGG | + | chr7_4:58664544-58664563 | Msa1166570:CDS | 50.0% | |
| CTTCCTCAAACGGAACTCCT+CGG | - | chr7_4:58665285-58665304 | None:intergenic | 50.0% | |
| AAGCCAGAAGGACCTAAACC+TGG | + | chr7_4:58665368-58665387 | Msa1166570:CDS | 50.0% | |
| GCTCCTTCAACCATGAAACC+AGG | - | chr7_4:58665389-58665408 | None:intergenic | 50.0% | |
| TTCGTATTGCTTGTGGGTCG+TGG | + | chr7_4:58665636-58665655 | Msa1166570:three_prime_UTR | 50.0% | |
| !! | GTGGCACTGATCGTTACGAT+GGG | + | chr7_4:58665655-58665674 | Msa1166570:three_prime_UTR | 50.0% |
| ! | GTTTGTTGCGTTGCTGCTGA+CGG | + | chr7_4:58665708-58665727 | Msa1166570:three_prime_UTR | 50.0% |
| TTTGTTGCGTTGCTGCTGAC+GGG | + | chr7_4:58665709-58665728 | Msa1166570:three_prime_UTR | 50.0% | |
| AGGAGAAGAAAGATGCCGGC+TGG | + | chr7_4:58664370-58664389 | Msa1166570:exon | 55.0% | |
| ! | AGAAAGATGCCGGCTGGTCA+TGG | + | chr7_4:58664376-58664395 | Msa1166570:exon | 55.0% |
| !! | GGTTCTGAGGTAAGTGGCGA+GGG | - | chr7_4:58664461-58664480 | None:intergenic | 55.0% |
| !! | AGGTTCTGAGGTAAGTGGCG+AGG | - | chr7_4:58664462-58664481 | None:intergenic | 55.0% |
| CGCCGATGTGATAGGTTCTG+AGG | - | chr7_4:58664474-58664493 | None:intergenic | 55.0% | |
| CGCCCATGGTAGAACTTGTG+TGG | - | chr7_4:58664541-58664560 | None:intergenic | 55.0% | |
| GGTAACGTTCCAGACACGAC+CGG | - | chr7_4:58664566-58664585 | None:intergenic | 55.0% | |
| TATGCCATCTAGGTGCACCG+AGG | + | chr7_4:58665265-58665284 | Msa1166570:CDS | 55.0% | |
| ! | AACTCCTCGGTGCACCTAGA+TGG | - | chr7_4:58665272-58665291 | None:intergenic | 55.0% |
| !! | CGTGGCACTGATCGTTACGA+TGG | + | chr7_4:58665654-58665673 | Msa1166570:three_prime_UTR | 55.0% |
| AGGAGAAGAAAGATGCCGGC+TGG | + | chr7_4:58664370-58664389 | Msa1166570:exon | 55.0% | |
| ! | AGAAAGATGCCGGCTGGTCA+TGG | + | chr7_4:58664376-58664395 | Msa1166570:exon | 55.0% |
| !! | GGTTCTGAGGTAAGTGGCGA+GGG | - | chr7_4:58664461-58664480 | None:intergenic | 55.0% |
| !! | AGGTTCTGAGGTAAGTGGCG+AGG | - | chr7_4:58664462-58664481 | None:intergenic | 55.0% |
| CGCCGATGTGATAGGTTCTG+AGG | - | chr7_4:58664474-58664493 | None:intergenic | 55.0% | |
| CGCCCATGGTAGAACTTGTG+TGG | - | chr7_4:58664541-58664560 | None:intergenic | 55.0% | |
| GGTAACGTTCCAGACACGAC+CGG | - | chr7_4:58664566-58664585 | None:intergenic | 55.0% | |
| TATGCCATCTAGGTGCACCG+AGG | + | chr7_4:58665265-58665284 | Msa1166570:CDS | 55.0% | |
| ! | AACTCCTCGGTGCACCTAGA+TGG | - | chr7_4:58665272-58665291 | None:intergenic | 55.0% |
| !! | CGTGGCACTGATCGTTACGA+TGG | + | chr7_4:58665654-58665673 | Msa1166570:three_prime_UTR | 55.0% |
| GCACCGAGGAGTTCCGTTTG+AGG | + | chr7_4:58665279-58665298 | Msa1166570:CDS | 60.0% | |
| AGCACCAAGCGCAAGCCAGA+AGG | + | chr7_4:58665356-58665375 | Msa1166570:CDS | 60.0% | |
| !! | AGGTCCTTCTGGCTTGCGCT+TGG | - | chr7_4:58665363-58665382 | None:intergenic | 60.0% |
| GCACCGAGGAGTTCCGTTTG+AGG | + | chr7_4:58665279-58665298 | Msa1166570:CDS | 60.0% | |
| AGCACCAAGCGCAAGCCAGA+AGG | + | chr7_4:58665356-58665375 | Msa1166570:CDS | 60.0% | |
| !! | AGGTCCTTCTGGCTTGCGCT+TGG | - | chr7_4:58665363-58665382 | None:intergenic | 60.0% |
| AGACACGACCGGTACGCCCA+TGG | - | chr7_4:58664555-58664574 | None:intergenic | 65.0% | |
| ! | ATGGGCGTACCGGTCGTGTC+TGG | + | chr7_4:58664554-58664573 | Msa1166570:CDS | 65.0% |
| AGACACGACCGGTACGCCCA+TGG | - | chr7_4:58664555-58664574 | None:intergenic | 65.0% | |
| ! | ATGGGCGTACCGGTCGTGTC+TGG | + | chr7_4:58664554-58664573 | Msa1166570:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 58664226 | 58665763 | 58664226 | ID=Msa1166570;Name=Msa1166570 |
| chr7_4 | mRNA | 58664226 | 58665763 | 58664226 | ID=Msa1166570-mRNA-1;Parent=Msa1166570;Name=Msa1166570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=156|1|1|1|1|1|2|291|164 |
| chr7_4 | exon | 58664226 | 58664618 | 58664226 | ID=Msa1166570-mRNA-1:exon:17993;Parent=Msa1166570-mRNA-1 |
| chr7_4 | exon | 58665215 | 58665763 | 58665215 | ID=Msa1166570-mRNA-1:exon:17994;Parent=Msa1166570-mRNA-1 |
| chr7_4 | five_prime_UTR | 58664226 | 58664381 | 58664226 | ID=Msa1166570-mRNA-1:five_prime_utr;Parent=Msa1166570-mRNA-1 |
| chr7_4 | CDS | 58664382 | 58664618 | 58664382 | ID=Msa1166570-mRNA-1:cds;Parent=Msa1166570-mRNA-1 |
| chr7_4 | CDS | 58665215 | 58665472 | 58665215 | ID=Msa1166570-mRNA-1:cds;Parent=Msa1166570-mRNA-1 |
| chr7_4 | three_prime_UTR | 58665473 | 58665763 | 58665473 | ID=Msa1166570-mRNA-1:three_prime_utr;Parent=Msa1166570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
