Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368920 | KAF5465863.1 | 85.714 | 49 | 7 | 0 | 4 | 52 | 108 | 156 | 5.27e-19 | 90.5 |
| Msa1368920 | KAF5465863.1 | 99.296 | 142 | 1 | 0 | 59 | 200 | 15 | 156 | 3.11e-95 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368920 | sp|P49690|RL23_ARATH | 98.571 | 140 | 2 | 0 | 61 | 200 | 1 | 140 | 1.48e-96 | 279 |
| Msa1368920 | sp|P49690|RL23_ARATH | 85.714 | 49 | 7 | 0 | 4 | 52 | 92 | 140 | 6.47e-22 | 90.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368920 | A0A0E0M8I0 | 85.782 | 211 | 16 | 1 | 4 | 200 | 92 | 302 | 7.83e-121 | 353 |
| Msa1368920 | A0A0E0M8I0 | 97.842 | 139 | 3 | 0 | 61 | 199 | 1 | 139 | 2.06e-90 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1368920 | 0.819775 | 9.726337e-53 | -8.615850e-47 |
| Msa0003330 | Msa1368920 | 0.811535 | 6.669779e-51 | -8.615850e-47 |
| Msa0003360 | Msa1368920 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa0027590 | Msa1368920 | 0.880959 | 3.571610e-70 | -8.615850e-47 |
| Msa0032780 | Msa1368920 | 0.833452 | 5.290482e-56 | -8.615850e-47 |
| Msa0040220 | Msa1368920 | 0.829247 | 5.728916e-55 | -8.615850e-47 |
| Msa0042480 | Msa1368920 | 0.859259 | 4.679312e-63 | -8.615850e-47 |
| Msa0049690 | Msa1368920 | 0.810692 | 1.015679e-50 | -8.615850e-47 |
| Msa0072570 | Msa1368920 | 0.817223 | 3.687078e-52 | -8.615850e-47 |
| Msa0075350 | Msa1368920 | 0.879634 | 1.061986e-69 | -8.615850e-47 |
| Msa0079590 | Msa1368920 | 0.861620 | 9.029077e-64 | -8.615850e-47 |
| Msa0087910 | Msa1368920 | 0.848875 | 4.636790e-60 | -8.615850e-47 |
| Msa0100420 | Msa1368920 | 0.836058 | 1.168984e-56 | -8.615850e-47 |
| Msa0114570 | Msa1368920 | 0.853131 | 2.926559e-61 | -8.615850e-47 |
| Msa0116670 | Msa1368920 | 0.822171 | 2.732187e-53 | -8.615850e-47 |
| Msa1351020 | Msa1368920 | 0.829001 | 6.570783e-55 | -8.615850e-47 |
| Msa1356790 | Msa1368920 | 0.887797 | 1.040003e-72 | -8.615850e-47 |
| Msa1362210 | Msa1368920 | 0.810181 | 1.309646e-50 | -8.615850e-47 |
| Msa1362790 | Msa1368920 | 0.853661 | 2.061622e-61 | -8.615850e-47 |
| Msa1368920 | Msa1374240 | 0.878683 | 2.303235e-69 | -8.615850e-47 |
| Msa1368920 | Msa1374480 | 0.824633 | 7.261063e-54 | -8.615850e-47 |
| Msa1368920 | Msa1392590 | 0.871979 | 4.522585e-67 | -8.615850e-47 |
| Msa1368920 | Msa1397100 | 0.842638 | 2.287805e-58 | -8.615850e-47 |
| Msa1368920 | Msa1397660 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa1368920 | Msa1403910 | 0.850471 | 1.662229e-60 | -8.615850e-47 |
| Msa1368920 | Msa1406080 | 0.850703 | 1.430729e-60 | -8.615850e-47 |
| Msa1368920 | Msa1418770 | 0.863670 | 2.109075e-64 | -8.615850e-47 |
| Msa1368920 | Msa1426120 | 0.893628 | 5.267962e-75 | -8.615850e-47 |
| Msa1368920 | Msa1426370 | 0.804911 | 1.720602e-49 | -8.615850e-47 |
| Msa1368920 | Msa1426490 | 0.811476 | 6.870257e-51 | -8.615850e-47 |
| Msa1368920 | Msa1432310 | 0.804772 | 1.840299e-49 | -8.615850e-47 |
| Msa1368920 | Msa1437280 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
| Msa1368920 | Msa1446410 | 0.858008 | 1.106428e-62 | -8.615850e-47 |
| Msa1368920 | Msa1449160 | 0.829107 | 6.194108e-55 | -8.615850e-47 |
| Msa1368920 | Msa1455950 | 0.811412 | 7.093629e-51 | -8.615850e-47 |
| Msa1368920 | Msa1463570 | 0.841475 | 4.647235e-58 | -8.615850e-47 |
| Msa0604960 | Msa1368920 | 0.828065 | 1.105683e-54 | -8.615850e-47 |
| Msa0605890 | Msa1368920 | 0.844359 | 7.939729e-59 | -8.615850e-47 |
| Msa0617540 | Msa1368920 | 0.823366 | 1.439667e-53 | -8.615850e-47 |
| Msa0622230 | Msa1368920 | 0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0625570 | Msa1368920 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
| Msa0649890 | Msa1368920 | 0.817326 | 3.494994e-52 | -8.615850e-47 |
| Msa0653060 | Msa1368920 | 0.825074 | 5.715020e-54 | -8.615850e-47 |
| Msa0681220 | Msa1368920 | 0.828546 | 8.467714e-55 | -8.615850e-47 |
| Msa0686550 | Msa1368920 | 0.809221 | 2.105966e-50 | -8.615850e-47 |
| Msa0694400 | Msa1368920 | 0.815473 | 9.079395e-52 | -8.615850e-47 |
| Msa0704860 | Msa1368920 | 0.814830 | 1.261811e-51 | -8.615850e-47 |
| Msa0705800 | Msa1368920 | 0.897750 | 1.038781e-76 | -8.615850e-47 |
| Msa0711960 | Msa1368920 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0712610 | Msa1368920 | 0.894279 | 2.864259e-75 | -8.615850e-47 |
| Msa0717380 | Msa1368920 | 0.831962 | 1.239713e-55 | -8.615850e-47 |
| Msa0729200 | Msa1368920 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
| Msa0748350 | Msa1368920 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa0752910 | Msa1368920 | 0.905070 | 6.328996e-80 | -8.615850e-47 |
| Msa0758420 | Msa1368920 | 0.827728 | 1.332965e-54 | -8.615850e-47 |
| Msa0776890 | Msa1368920 | 0.815559 | 8.689479e-52 | -8.615850e-47 |
| Msa0781080 | Msa1368920 | 0.870848 | 1.070219e-66 | -8.615850e-47 |
| Msa0781310 | Msa1368920 | 0.813886 | 2.039394e-51 | -8.615850e-47 |
| Msa0783630 | Msa1368920 | 0.814598 | 1.420125e-51 | -8.615850e-47 |
| Msa0786660 | Msa1368920 | 0.836598 | 8.519483e-57 | -8.615850e-47 |
| Msa0788380 | Msa1368920 | 0.901757 | 1.938922e-78 | -8.615850e-47 |
| Msa0792420 | Msa1368920 | 0.830257 | 3.252167e-55 | -8.615850e-47 |
| Msa0799830 | Msa1368920 | 0.843787 | 1.130259e-58 | -8.615850e-47 |
| Msa0821070 | Msa1368920 | 0.805641 | 1.210433e-49 | -8.615850e-47 |
| Msa0822580 | Msa1368920 | 0.901713 | 2.027593e-78 | -8.615850e-47 |
| Msa0827380 | Msa1368920 | 0.836633 | 8.345037e-57 | -8.615850e-47 |
| Msa0838070 | Msa1368920 | 0.862759 | 4.034851e-64 | -8.615850e-47 |
| Msa0128330 | Msa1368920 | 0.838555 | 2.682162e-57 | -8.615850e-47 |
| Msa0128750 | Msa1368920 | 0.859382 | 4.300481e-63 | -8.615850e-47 |
| Msa0134580 | Msa1368920 | 0.846883 | 1.641872e-59 | -8.615850e-47 |
| Msa0138890 | Msa1368920 | 0.862437 | 5.071068e-64 | -8.615850e-47 |
| Msa0167860 | Msa1368920 | 0.834763 | 2.483250e-56 | -8.615850e-47 |
| Msa0172930 | Msa1368920 | 0.848285 | 6.758227e-60 | -8.615850e-47 |
| Msa0173530 | Msa1368920 | 0.819275 | 1.264786e-52 | -8.615850e-47 |
| Msa0174580 | Msa1368920 | 0.841098 | 5.837904e-58 | -8.615850e-47 |
| Msa0175000 | Msa1368920 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0181490 | Msa1368920 | 0.806234 | 9.082663e-50 | -8.615850e-47 |
| Msa0191450 | Msa1368920 | 0.912904 | 1.141085e-83 | -8.615850e-47 |
| Msa0191550 | Msa1368920 | 0.910109 | 2.705274e-82 | -8.615850e-47 |
| Msa0192750 | Msa1368920 | 0.853064 | 3.058221e-61 | -8.615850e-47 |
| Msa0194940 | Msa1368920 | 0.898476 | 5.109594e-77 | -8.615850e-47 |
| Msa0197980 | Msa1368920 | 0.808284 | 3.340646e-50 | -8.615850e-47 |
| Msa0210330 | Msa1368920 | 0.809147 | 2.184344e-50 | -8.615850e-47 |
| Msa0210360 | Msa1368920 | 0.891150 | 5.163897e-74 | -8.615850e-47 |
| Msa0219120 | Msa1368920 | 0.803500 | 3.385103e-49 | -8.615850e-47 |
| Msa0222730 | Msa1368920 | 0.831151 | 1.963917e-55 | -8.615850e-47 |
| Msa0229150 | Msa1368920 | 0.819956 | 8.846579e-53 | -8.615850e-47 |
| Msa0235050 | Msa1368920 | 0.854651 | 1.067912e-61 | -8.615850e-47 |
| Msa1228490 | Msa1368920 | 0.808243 | 3.408859e-50 | -8.615850e-47 |
| Msa1240270 | Msa1368920 | 0.881583 | 2.127027e-70 | -8.615850e-47 |
| Msa1256840 | Msa1368920 | 0.856135 | 3.948164e-62 | -8.615850e-47 |
| Msa1258540 | Msa1368920 | 0.852907 | 3.392392e-61 | -8.615850e-47 |
| Msa1270640 | Msa1368920 | 0.853487 | 2.312853e-61 | -8.615850e-47 |
| Msa1270710 | Msa1368920 | 0.848710 | 5.152149e-60 | -8.615850e-47 |
| Msa1278130 | Msa1368920 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa1295150 | Msa1368920 | 0.856898 | 2.356107e-62 | -8.615850e-47 |
| Msa1295170 | Msa1368920 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa1301640 | Msa1368920 | 0.815187 | 1.051249e-51 | -8.615850e-47 |
| Msa1311400 | Msa1368920 | 0.919227 | 5.855988e-87 | -8.615850e-47 |
| Msa1321790 | Msa1368920 | 0.817516 | 3.166793e-52 | -8.615850e-47 |
| Msa1332250 | Msa1368920 | 0.874694 | 5.527518e-68 | -8.615850e-47 |
| Msa1338190 | Msa1368920 | 0.807317 | 5.362360e-50 | -8.615850e-47 |
| Msa0369410 | Msa1368920 | 0.852138 | 5.617395e-61 | -8.615850e-47 |
| Msa0376830 | Msa1368920 | 0.810888 | 9.215548e-51 | -8.615850e-47 |
| Msa0376890 | Msa1368920 | 0.840535 | 8.201113e-58 | -8.615850e-47 |
| Msa0426090 | Msa1368920 | 0.860293 | 2.284311e-63 | -8.615850e-47 |
| Msa0426250 | Msa1368920 | 0.857848 | 1.234289e-62 | -8.615850e-47 |
| Msa0436750 | Msa1368920 | 0.826197 | 3.095185e-54 | -8.615850e-47 |
| Msa0438960 | Msa1368920 | 0.818763 | 1.653992e-52 | -8.615850e-47 |
| Msa0463520 | Msa1368920 | 0.831687 | 1.449023e-55 | -8.615850e-47 |
| Msa0471880 | Msa1368920 | 0.842947 | 1.894053e-58 | -8.615850e-47 |
| Msa0472480 | Msa1368920 | 0.854086 | 1.555909e-61 | -8.615850e-47 |
| Msa0473570 | Msa1368920 | 0.810108 | 1.357993e-50 | -8.615850e-47 |
| Msa0475810 | Msa1368920 | 0.820901 | 5.367619e-53 | -8.615850e-47 |
| Msa0481520 | Msa1368920 | 0.883131 | 5.814602e-71 | -8.615850e-47 |
| Msa0481850 | Msa1368920 | 0.894685 | 1.953453e-75 | -8.615850e-47 |
| Msa1021120 | Msa1368920 | 0.805651 | 1.204553e-49 | -8.615850e-47 |
| Msa1037290 | Msa1368920 | 0.999766 | 0.000000e+00 | -8.615850e-47 |
| Msa1040160 | Msa1368920 | 0.882634 | 8.839236e-71 | -8.615850e-47 |
| Msa1041680 | Msa1368920 | 0.899111 | 2.737267e-77 | -8.615850e-47 |
| Msa1042100 | Msa1368920 | 0.853273 | 2.664270e-61 | -8.615850e-47 |
| Msa1078870 | Msa1368920 | 0.895255 | 1.140423e-75 | -8.615850e-47 |
| Msa1078980 | Msa1368920 | 0.899479 | 1.903016e-77 | -8.615850e-47 |
| Msa1080350 | Msa1368920 | 0.884221 | 2.308272e-71 | -8.615850e-47 |
| Msa1082170 | Msa1368920 | 0.891009 | 5.870841e-74 | -8.615850e-47 |
| Msa1083370 | Msa1368920 | 0.859281 | 4.610613e-63 | -8.615850e-47 |
| Msa1096900 | Msa1368920 | 0.842182 | 3.022003e-58 | -8.615850e-47 |
| Msa0239420 | Msa1368920 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
| Msa0257450 | Msa1368920 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0277600 | Msa1368920 | 0.804618 | 1.981360e-49 | -8.615850e-47 |
| Msa0281370 | Msa1368920 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
| Msa0295880 | Msa1368920 | 0.803122 | 4.053380e-49 | -8.615850e-47 |
| Msa0297830 | Msa1368920 | 0.882462 | 1.020589e-70 | -8.615850e-47 |
| Msa0298870 | Msa1368920 | 0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa0301220 | Msa1368920 | 0.849407 | 3.299130e-60 | -8.615850e-47 |
| Msa0312210 | Msa1368920 | 0.816204 | 6.239356e-52 | -8.615850e-47 |
| Msa0313520 | Msa1368920 | 0.824685 | 7.060483e-54 | -8.615850e-47 |
| Msa0315430 | Msa1368920 | 0.842849 | 2.011527e-58 | -8.615850e-47 |
| Msa0334030 | Msa1368920 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
| Msa0335840 | Msa1368920 | 0.892944 | 9.948015e-75 | -8.615850e-47 |
| Msa0341880 | Msa1368920 | 0.803270 | 3.776253e-49 | -8.615850e-47 |
| Msa1125860 | Msa1368920 | 0.876548 | 1.279327e-68 | -8.615850e-47 |
| Msa1126060 | Msa1368920 | 0.877425 | 6.351856e-69 | -8.615850e-47 |
| Msa1126520 | Msa1368920 | 0.932299 | 1.048674e-94 | -8.615850e-47 |
| Msa1147670 | Msa1368920 | 0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa1164150 | Msa1368920 | 0.988112 | 9.294457e-173 | -8.615850e-47 |
| Msa1165640 | Msa1368920 | 0.835111 | 2.029779e-56 | -8.615850e-47 |
| Msa1166570 | Msa1368920 | 0.903256 | 4.185422e-79 | -8.615850e-47 |
| Msa1167540 | Msa1368920 | 0.839055 | 1.991504e-57 | -8.615850e-47 |
| Msa1167550 | Msa1368920 | 0.800620 | 1.322964e-48 | -8.615850e-47 |
| Msa1169180 | Msa1368920 | 0.899315 | 2.237713e-77 | -8.615850e-47 |
| Msa1180000 | Msa1368920 | 0.849437 | 3.235754e-60 | -8.615850e-47 |
| Msa1186030 | Msa1368920 | 0.869126 | 3.910288e-66 | -8.615850e-47 |
| Msa1203560 | Msa1368920 | 0.803757 | 2.993326e-49 | -8.615850e-47 |
| Msa1208330 | Msa1368920 | 0.816775 | 4.646306e-52 | -8.615850e-47 |
| Msa1218170 | Msa1368920 | 0.863853 | 1.850733e-64 | -8.615850e-47 |
| Msa0484730 | Msa1368920 | 0.822221 | 2.659650e-53 | -8.615850e-47 |
| Msa0517480 | Msa1368920 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0529900 | Msa1368920 | 0.855115 | 7.835294e-62 | -8.615850e-47 |
| Msa0550420 | Msa1368920 | 0.824191 | 9.225455e-54 | -8.615850e-47 |
| Msa0573550 | Msa1368920 | 0.860271 | 2.320652e-63 | -8.615850e-47 |
| Msa0579830 | Msa1368920 | 0.829609 | 4.676872e-55 | -8.615850e-47 |
| Msa0582070 | Msa1368920 | 0.827773 | 1.299939e-54 | -8.615850e-47 |
| Msa0584030 | Msa1368920 | 0.869773 | 2.407454e-66 | -8.615850e-47 |
| Msa0596370 | Msa1368920 | 0.837920 | 3.908449e-57 | -8.615850e-47 |
| Msa0597240 | Msa1368920 | 0.812507 | 4.094503e-51 | -8.615850e-47 |
| Msa0861320 | Msa1368920 | 0.866117 | 3.603657e-65 | -8.615850e-47 |
| Msa0888810 | Msa1368920 | 0.808017 | 3.807350e-50 | -8.615850e-47 |
| Msa0915540 | Msa1368920 | 0.854281 | 1.366589e-61 | -8.615850e-47 |
| Msa0929700 | Msa1368920 | 0.834475 | 2.934440e-56 | -8.615850e-47 |
| Msa0945480 | Msa1368920 | 0.834321 | 3.206973e-56 | -8.615850e-47 |
| Msa0966670 | Msa1368920 | 0.853035 | 3.117164e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368920 | MtrunA17_Chr7g0261941 | 98.571 | 140 | 2 | 0 | 61 | 200 | 1 | 140 | 4.24e-97 | 278 |
| Msa1368920 | MtrunA17_Chr7g0261941 | 83.673 | 49 | 8 | 0 | 4 | 52 | 92 | 140 | 2.93e-22 | 87.8 |
| Msa1368920 | MtrunA17_Chr1g0183341 | 98.571 | 140 | 2 | 0 | 61 | 200 | 1 | 140 | 4.24e-97 | 278 |
| Msa1368920 | MtrunA17_Chr1g0183341 | 83.673 | 49 | 8 | 0 | 4 | 52 | 92 | 140 | 2.93e-22 | 87.8 |
| Msa1368920 | MtrunA17_Chr1g0157171 | 83.471 | 121 | 6 | 1 | 76 | 196 | 1 | 107 | 3.53e-65 | 197 |
| Msa1368920 | MtrunA17_Chr1g0157171 | 82.222 | 45 | 8 | 0 | 4 | 48 | 63 | 107 | 9.57e-20 | 81.3 |
| Msa1368920 | MtrunA17_Chr3g0079201 | 86.076 | 79 | 11 | 0 | 122 | 200 | 1 | 79 | 5.50e-44 | 141 |
| Msa1368920 | MtrunA17_Chr3g0079201 | 71.429 | 49 | 14 | 0 | 4 | 52 | 31 | 79 | 1.22e-18 | 76.6 |
| Msa1368920 | MtrunA17_Chr5g0422671 | 86.567 | 67 | 9 | 0 | 134 | 200 | 2 | 68 | 1.02e-36 | 122 |
| Msa1368920 | MtrunA17_Chr5g0422671 | 77.551 | 49 | 11 | 0 | 4 | 52 | 20 | 68 | 7.37e-21 | 82.0 |
| Msa1368920 | MtrunA17_Chr3g0092871 | 89.796 | 49 | 5 | 0 | 74 | 122 | 16 | 64 | 8.20e-24 | 89.7 |
| Msa1368920 | MtrunA17_Chr5g0422681 | 81.633 | 49 | 9 | 0 | 74 | 122 | 16 | 64 | 4.62e-20 | 80.1 |
| Msa1368920 | MtrunA17_Chr4g0015931 | 36.522 | 115 | 65 | 3 | 86 | 196 | 8 | 118 | 2.23e-15 | 69.3 |
| Msa1368920 | MtrunA17_CPg0492591 | 36.522 | 115 | 65 | 3 | 86 | 196 | 8 | 118 | 2.23e-15 | 69.3 |
| Msa1368920 | MtrunA17_Chr2g0322131 | 35.514 | 107 | 62 | 2 | 86 | 189 | 8 | 110 | 3.83e-14 | 66.2 |
| Msa1368920 | MtrunA17_Chr4g0017131 | 37.363 | 91 | 50 | 2 | 86 | 173 | 8 | 94 | 1.72e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368920 | AT2G33370.1 | 98.571 | 140 | 2 | 0 | 61 | 200 | 1 | 140 | 1.50e-97 | 279 |
| Msa1368920 | AT2G33370.1 | 85.714 | 49 | 7 | 0 | 4 | 52 | 92 | 140 | 6.58e-23 | 90.1 |
| Msa1368920 | AT1G04480.1 | 98.571 | 140 | 2 | 0 | 61 | 200 | 1 | 140 | 1.50e-97 | 279 |
| Msa1368920 | AT1G04480.1 | 85.714 | 49 | 7 | 0 | 4 | 52 | 92 | 140 | 6.58e-23 | 90.1 |
| Msa1368920 | AT3G04400.1 | 98.571 | 140 | 2 | 0 | 61 | 200 | 1 | 140 | 1.50e-97 | 279 |
| Msa1368920 | AT3G04400.1 | 85.714 | 49 | 7 | 0 | 4 | 52 | 92 | 140 | 6.58e-23 | 90.1 |
| Msa1368920 | AT2G33370.2 | 100.000 | 125 | 0 | 0 | 76 | 200 | 1 | 125 | 6.86e-87 | 252 |
| Msa1368920 | AT2G33370.2 | 85.714 | 49 | 7 | 0 | 4 | 52 | 77 | 125 | 6.56e-23 | 89.4 |
| Msa1368920 | AT3G04400.2 | 100.000 | 125 | 0 | 0 | 76 | 200 | 1 | 125 | 6.86e-87 | 252 |
| Msa1368920 | AT3G04400.2 | 85.714 | 49 | 7 | 0 | 4 | 52 | 77 | 125 | 6.56e-23 | 89.4 |
| Msa1368920 | ATCG00780.1 | 34.783 | 115 | 67 | 3 | 86 | 196 | 8 | 118 | 2.53e-14 | 67.0 |
Find 75 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGATTCATCAAGGGAATT+TGG | 0.133338 | tig0018661:-128562 | Msa1368920:three_prime_UTR |
| TTTACCTTTCATTTCTCCTT+TGG | 0.232028 | tig0018661:+129349 | None:intergenic |
| ATTGTAGGGTCTTCTATTAC+TGG | 0.285333 | tig0018661:-135223 | Msa1368920:intron |
| TTACCTTTCATTTCTCCTTT+GGG | 0.290146 | tig0018661:+129350 | None:intergenic |
| TCGATTCATCAAGGGAATTT+GGG | 0.335431 | tig0018661:-128561 | Msa1368920:three_prime_UTR |
| ATTCTTAGCTCCGGTGTTAT+CGG | 0.357276 | tig0018661:+129699 | None:intergenic |
| AAATACATTCAACCTAAAAC+TGG | 0.367714 | tig0018661:+128814 | None:intergenic |
| ACATGAAAACACCGTCCTTT+CGG | 0.371684 | tig0018661:+129518 | None:intergenic |
| GATCCGCGGGTAACAAGTTC+AGG | 0.386005 | tig0018661:-129762 | Msa1368920:CDS |
| TCTTCTATTACTGGTCCAAT+TGG | 0.392146 | tig0018661:-135214 | Msa1368920:CDS |
| GGAAGGAGTGTGCTGATCTA+TGG | 0.394494 | tig0018661:-128923 | Msa1368920:CDS |
| CCTTCCTTTGATACCTTTGA+CGG | 0.396996 | tig0018661:+129663 | None:intergenic |
| TAATTGTGATCAACAATGAT+TGG | 0.401689 | tig0018661:-128593 | Msa1368920:three_prime_UTR |
| TTACCTTTCATTTCACCCTT+AGG | 0.408748 | tig0018661:+135766 | None:intergenic |
| TTGTTGTACTGCGAAGTCTT+TGG | 0.411315 | tig0018661:-128756 | Msa1368920:three_prime_UTR |
| AGCACCTTCTTACGGAGATC+AGG | 0.422915 | tig0018661:+129577 | None:intergenic |
| TCAGCACACTCCTTCCCAAT+TGG | 0.439848 | tig0018661:+135199 | None:intergenic |
| TTCTGCTTGCGTTGGTGACA+TGG | 0.443666 | tig0018661:-129626 | Msa1368920:CDS |
| GGAAGGAGTGTGCTGATTTG+TGG | 0.446357 | tig0018661:-135192 | Msa1368920:CDS |
| CAATTCACCGTCGCCGCCAC+TGG | 0.459295 | tig0018661:+129724 | None:intergenic |
| TTGGTTTATGTAGATAATGC+TGG | 0.461837 | tig0018661:-135802 | Msa1368920:CDS |
| CTTCTATTACTGGTCCAATT+GGG | 0.462970 | tig0018661:-135213 | Msa1368920:CDS |
| TTAGCAGCACTTGCAATCCT+AGG | 0.471348 | tig0018661:+128900 | None:intergenic |
| CTCTACATCATTTCCGTCAA+AGG | 0.478393 | tig0018661:-129676 | Msa1368920:CDS |
| GGTGATGGCCACCGTGAAGA+AGG | 0.480460 | tig0018661:-129605 | Msa1368920:CDS |
| TTAGCAGCACTTGCAATCCT+AGG | 0.480693 | tig0018661:+135169 | None:intergenic |
| CGTTTGCCTTCTGCTTGCGT+TGG | 0.482632 | tig0018661:-129634 | Msa1368920:CDS |
| TCTGCTATCACTGGTCCAAT+CGG | 0.485775 | tig0018661:-128945 | Msa1368920:CDS |
| TAACAAGTTCAGGATGTCAC+TGG | 0.500497 | tig0018661:-129752 | Msa1368920:CDS |
| CGGCAGGAAGCACCTTCTTA+CGG | 0.502055 | tig0018661:+129569 | None:intergenic |
| ATCAGGCTTACCCTTCTTCA+CGG | 0.504036 | tig0018661:+129594 | None:intergenic |
| CTCAGGTCGCGGAGGATCCG+CGG | 0.504873 | tig0018661:-129776 | Msa1368920:intron |
| CTGCTATCACTGGTCCAATC+GGG | 0.511052 | tig0018661:-128944 | Msa1368920:CDS |
| ACAAACAACTCTTTAGAACT+AGG | 0.529116 | tig0018661:+128721 | None:intergenic |
| TTGTATTGTGCAGACAATGC+TGG | 0.531818 | tig0018661:-129386 | Msa1368920:intron |
| ATTGTAGGGTCTGCTATCAC+TGG | 0.534637 | tig0018661:-128954 | Msa1368920:intron |
| CAACGCAAGCAGAAGGCAAA+CGG | 0.538758 | tig0018661:+129635 | None:intergenic |
| AGTGTGCTGATTTGTGGCCT+AGG | 0.539122 | tig0018661:-135186 | Msa1368920:CDS |
| TCAGCACACTCCTTCCCGAT+TGG | 0.539409 | tig0018661:+128930 | None:intergenic |
| CGCTGGCGAACGATGACGGC+AGG | 0.540043 | tig0018661:+129553 | None:intergenic |
| ACACCGTCCTTTCGGCGCCA+TGG | 0.550488 | tig0018661:+129526 | None:intergenic |
| TGGTGTTATTGTGAATCCTA+AGG | 0.550781 | tig0018661:-135782 | Msa1368920:CDS |
| CCGTCAAAGGTATCAAAGGA+AGG | 0.551618 | tig0018661:-129663 | Msa1368920:CDS |
| CATTGATATGCAAATGGCAC+AGG | 0.552893 | tig0018661:+128668 | None:intergenic |
| TCAGGTCGCGGAGGATCCGC+GGG | 0.560803 | tig0018661:-129775 | Msa1368920:intron |
| AGTGTGCTGATCTATGGCCT+AGG | 0.561029 | tig0018661:-128917 | Msa1368920:CDS |
| TTCGGCGCCATGGTTTACGC+TGG | 0.563205 | tig0018661:+129536 | None:intergenic |
| TCTCAAGATCAAATAACTGA+TGG | 0.564644 | tig0018661:+128643 | None:intergenic |
| GGTGTTATTGTTAATCCCAA+AGG | 0.565013 | tig0018661:-129365 | Msa1368920:CDS |
| TAAGCCTGATCTCCGTAAGA+AGG | 0.569085 | tig0018661:-129581 | Msa1368920:CDS |
| AATCCTAAGGGTGAAATGAA+AGG | 0.569275 | tig0018661:-135769 | Msa1368920:intron |
| ATGGTGCATTGATATGCAAA+TGG | 0.573908 | tig0018661:+128662 | None:intergenic |
| ATTTCCGTCAAAGGTATCAA+AGG | 0.575410 | tig0018661:-129667 | Msa1368920:CDS |
| GGGTCTACCAGTGGCGGCGA+CGG | 0.576990 | tig0018661:-129731 | Msa1368920:CDS |
| TTTGCTAATCGATTCATCAA+GGG | 0.578271 | tig0018661:-128569 | Msa1368920:three_prime_UTR |
| GTGATGGCCACCGTGAAGAA+GGG | 0.579374 | tig0018661:-129604 | Msa1368920:CDS |
| TATTACTGGTCCAATTGGGA+AGG | 0.584099 | tig0018661:-135209 | Msa1368920:CDS |
| TTGCGTTGGTGACATGGTGA+TGG | 0.588839 | tig0018661:-129620 | Msa1368920:CDS |
| GTTTATTCTTGTGCAATCTG+TGG | 0.589070 | tig0018661:-128698 | Msa1368920:three_prime_UTR |
| GATGTAGAGATTCTTAGCTC+CGG | 0.596136 | tig0018661:+129690 | None:intergenic |
| TTTACGCTGGCGAACGATGA+CGG | 0.598744 | tig0018661:+129549 | None:intergenic |
| AAACCATGGCGCCGAAAGGA+CGG | 0.604162 | tig0018661:-129529 | Msa1368920:CDS |
| GCGTAAACCATGGCGCCGAA+AGG | 0.604166 | tig0018661:-129533 | Msa1368920:CDS |
| AACAAGTTCAGGATGTCACT+GGG | 0.607031 | tig0018661:-129751 | Msa1368920:CDS |
| ATGTCACCAACGCAAGCAGA+AGG | 0.609870 | tig0018661:+129628 | None:intergenic |
| GTCACTGGGTCTACCAGTGG+CGG | 0.621290 | tig0018661:-129737 | Msa1368920:CDS |
| GTGAATTGCGCCGATAACAC+CGG | 0.624326 | tig0018661:-129709 | Msa1368920:CDS |
| AATCCCAAAGGAGAAATGAA+AGG | 0.624552 | tig0018661:-129353 | Msa1368920:intron |
| GGTGTTATTGTGAATCCTAA+GGG | 0.639626 | tig0018661:-135781 | Msa1368920:CDS |
| TCGTTCGCCAGCGTAAACCA+TGG | 0.647146 | tig0018661:-129543 | Msa1368920:CDS |
| GCAGCAGCAATGTCGAAGAG+AGG | 0.651240 | tig0018661:-129889 | Msa1368920:intron |
| GATGTCACTGGGTCTACCAG+TGG | 0.653286 | tig0018661:-129740 | Msa1368920:CDS |
| TATCACTGGTCCAATCGGGA+AGG | 0.675150 | tig0018661:-128940 | Msa1368920:CDS |
| CATCCTGAACTTGTTACCCG+CGG | 0.683379 | tig0018661:+129759 | None:intergenic |
| AGGCTTACCCTTCTTCACGG+TGG | 0.718796 | tig0018661:+129597 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATTTATTATAAAAT+AGG | - | tig0018661:133795-133814 | Msa1368920:intron | 0.0% |
| !! | AATAAAATAAAATATAATTA+AGG | - | tig0018661:134316-134335 | Msa1368920:intron | 0.0% |
| !!! | GTATTTTGAATATTAATTTT+TGG | - | tig0018661:129324-129343 | Msa1368920:intron | 10.0% |
| !!! | AAATTAATAGTATTTTTTAG+TGG | + | tig0018661:132787-132806 | None:intergenic | 10.0% |
| !!! | AAACATTTTTGTTTTTAATT+TGG | - | tig0018661:132894-132913 | Msa1368920:intron | 10.0% |
| !!! | AACATTTTTGTTTTTAATTT+GGG | - | tig0018661:132895-132914 | Msa1368920:intron | 10.0% |
| !! | TAAATTATAAAAGATAAACA+TGG | + | tig0018661:133786-133805 | None:intergenic | 10.0% |
| !! | TTAATAATCAGTATTAAAAT+TGG | - | tig0018661:135297-135316 | Msa1368920:intron | 10.0% |
| !!! | GATTATTGATTTTGTTTATT+TGG | - | tig0018661:128552-128571 | Msa1368920:three_prime_UTR | 15.0% |
| !!! | TTTTTTATAATTCAAGGAAA+AGG | + | tig0018661:129948-129967 | None:intergenic | 15.0% |
| !!! | TTTTTCATACATTTTTCAAT+TGG | + | tig0018661:130132-130151 | None:intergenic | 15.0% |
| !! | TGAAAAATGTATGAAAAATT+AGG | - | tig0018661:130134-130153 | Msa1368920:intron | 15.0% |
| !!! | TATTTGTCATGTATATTTTT+TGG | - | tig0018661:130202-130221 | Msa1368920:intron | 15.0% |
| !!! | ATTTGTCATGTATATTTTTT+GGG | - | tig0018661:130203-130222 | Msa1368920:intron | 15.0% |
| !!! | TTGTCATTTATATTATTTGT+TGG | - | tig0018661:130727-130746 | Msa1368920:intron | 15.0% |
| !!! | TTATATTATTTGTTGGAATA+TGG | - | tig0018661:130734-130753 | Msa1368920:intron | 15.0% |
| !!! | TATATTATTTGTTGGAATAT+GGG | - | tig0018661:130735-130754 | Msa1368920:intron | 15.0% |
| !! | AAATTCATATTCTAATTTGA+GGG | + | tig0018661:131509-131528 | None:intergenic | 15.0% |
| !!! | GATTGATATAAACTTTTATT+TGG | - | tig0018661:131802-131821 | Msa1368920:intron | 15.0% |
| !!! | TATATGTTGATTTTATTGAA+GGG | + | tig0018661:132680-132699 | None:intergenic | 15.0% |
| !!! | TTATATGTTGATTTTATTGA+AGG | + | tig0018661:132681-132700 | None:intergenic | 15.0% |
| !!! | GTTGATAGATTAAATTAAAT+TGG | + | tig0018661:132752-132771 | None:intergenic | 15.0% |
| !!! | TCTATGAATGAAATTTTTTT+TGG | - | tig0018661:134235-134254 | Msa1368920:intron | 15.0% |
| !! | TAAAATATAATTAAGGAGTT+TGG | - | tig0018661:134323-134342 | Msa1368920:intron | 15.0% |
| !!! | TTTTATTTCTAGTATTGATA+AGG | - | tig0018661:135510-135529 | Msa1368920:intron | 15.0% |
| !! | TGTATGATATGAATCTATTT+AGG | - | tig0018661:128682-128701 | Msa1368920:three_prime_UTR | 20.0% |
| !! | ATGATATGAATGATTTGAAA+TGG | - | tig0018661:128812-128831 | Msa1368920:three_prime_UTR | 20.0% |
| !!! | TTCATTTTTCCAATTTTTAC+TGG | - | tig0018661:128978-128997 | Msa1368920:intron | 20.0% |
| !! | TGGTAAAATGATTTACTATT+TGG | - | tig0018661:129038-129057 | Msa1368920:intron | 20.0% |
| !! | ATTCAAAATACTTCTCAATA+CGG | + | tig0018661:129315-129334 | None:intergenic | 20.0% |
| !! | ACAAGAAAAACAAAATCATA+AGG | + | tig0018661:129696-129715 | None:intergenic | 20.0% |
| !! | TAGGATTATTTGATATTGTT+AGG | - | tig0018661:129888-129907 | Msa1368920:intron | 20.0% |
| !! | CTCTGTATAAATAAATGATA+TGG | - | tig0018661:130271-130290 | Msa1368920:intron | 20.0% |
| !! | AATTAAAAAACATCATACCT+AGG | + | tig0018661:130783-130802 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTAATTGTTGTTG+CGG | - | tig0018661:130790-130809 | Msa1368920:intron | 20.0% |
| !!! | TCAAAATTTTATTAAGTGTG+CGG | + | tig0018661:130918-130937 | None:intergenic | 20.0% |
| !!! | AATGTTTTAAGTTTTTTGAG+AGG | - | tig0018661:131154-131173 | Msa1368920:intron | 20.0% |
| !!! | ATTGTTTTGGTTTGAATATT+TGG | + | tig0018661:131316-131335 | None:intergenic | 20.0% |
| !! | ATACATATATAGATAGAGAT+AGG | - | tig0018661:131405-131424 | Msa1368920:intron | 20.0% |
| !! | GAAATTCATATTCTAATTTG+AGG | + | tig0018661:131510-131529 | None:intergenic | 20.0% |
| !!! | TATACGTTTTGAACATATAA+AGG | - | tig0018661:131538-131557 | Msa1368920:intron | 20.0% |
| !!! | ATTTTTCTTGAATGTATCAT+TGG | + | tig0018661:131631-131650 | None:intergenic | 20.0% |
| !!! | ATCATAATTATTTCTCAAGT+AGG | - | tig0018661:131727-131746 | Msa1368920:intron | 20.0% |
| !!! | TCATAATTATTTCTCAAGTA+GGG | - | tig0018661:131728-131747 | Msa1368920:intron | 20.0% |
| !!! | GATATAAACTTTTATTTGGT+TGG | - | tig0018661:131806-131825 | Msa1368920:intron | 20.0% |
| !! | ATTACTCAAAAAGAAAAACT+AGG | + | tig0018661:131907-131926 | None:intergenic | 20.0% |
| !! | AAATATTCAATTTAAGAGCA+AGG | - | tig0018661:132390-132409 | Msa1368920:intron | 20.0% |
| !!! | GAGTTAAGATATATTTTTCT+CGG | + | tig0018661:132927-132946 | None:intergenic | 20.0% |
| !!! | GTTTTGATTTATATCATGTT+CGG | + | tig0018661:133335-133354 | None:intergenic | 20.0% |
| !! | CACTACTAAAAACTAATTTA+TGG | + | tig0018661:134171-134190 | None:intergenic | 20.0% |
| !! | TGATTCTTACTTAATATTTC+TGG | - | tig0018661:134963-134982 | Msa1368920:intron | 20.0% |
| !! | TAATCAGTATTAAAATTGGT+TGG | - | tig0018661:135301-135320 | Msa1368920:intron | 20.0% |
| !!! | AATGTATTTTGAAATGTTTG+AGG | - | tig0018661:135573-135592 | Msa1368920:intron | 20.0% |
| !!! | GTATTGCTGTTTTTTATGTT+TGG | - | tig0018661:129081-129100 | Msa1368920:intron | 25.0% |
| ! | AAATCTGTAACAAACATTCT+CGG | - | tig0018661:129501-129520 | Msa1368920:intron | 25.0% |
| ! | CAAAGCCACAAAATAAAAAT+TGG | + | tig0018661:129647-129666 | None:intergenic | 25.0% |
| ! | TTCTTAGATAGTAGAGTTTA+TGG | - | tig0018661:129815-129834 | Msa1368920:intron | 25.0% |
| ! | GGAGTTCATCAAATTTATTT+CGG | - | tig0018661:129839-129858 | Msa1368920:intron | 25.0% |
| ! | ATCAAATAATCCTAGTAAGA+GGG | + | tig0018661:129882-129901 | None:intergenic | 25.0% |
| ! | TATCAAATAATCCTAGTAAG+AGG | + | tig0018661:129883-129902 | None:intergenic | 25.0% |
| ! | TGAATTGCTCAAAATTTGAT+AGG | - | tig0018661:129981-130000 | Msa1368920:intron | 25.0% |
| ! | ATTTGGTTATTCATGTTGTT+CGG | - | tig0018661:130078-130097 | Msa1368920:intron | 25.0% |
| ! | GTATGAAAAATTAGGTAAGT+TGG | - | tig0018661:130142-130161 | Msa1368920:intron | 25.0% |
| ! | AGAGATGACAAATAATATAC+TGG | + | tig0018661:130168-130187 | None:intergenic | 25.0% |
| !!! | CATGTATATTTTTTGGGTTA+TGG | - | tig0018661:130209-130228 | Msa1368920:intron | 25.0% |
| !! | ACAAAGGGCATAATTTATTA+TGG | - | tig0018661:130467-130486 | Msa1368920:intron | 25.0% |
| ! | TTATTATGGAGAATTTGTGA+AGG | - | tig0018661:130481-130500 | Msa1368920:intron | 25.0% |
| !! | CAAAATTTTATTAAGTGTGC+GGG | + | tig0018661:130917-130936 | None:intergenic | 25.0% |
| ! | ACTTATGAAAGTAAGTTTAC+TGG | - | tig0018661:130946-130965 | Msa1368920:intron | 25.0% |
| !!! | AAGTAAGTTTACTGGTTTTA+TGG | - | tig0018661:130954-130973 | Msa1368920:intron | 25.0% |
| ! | AACAGTAAATGAGAAGTTTA+AGG | - | tig0018661:131059-131078 | Msa1368920:intron | 25.0% |
| ! | TAAATGAGAAGTTTAAGGAA+AGG | - | tig0018661:131064-131083 | Msa1368920:intron | 25.0% |
| !! | GATATTCACAAATTCAGTTT+TGG | + | tig0018661:131208-131227 | None:intergenic | 25.0% |
| !! | GGATTATAACTTCTTTTGTT+TGG | - | tig0018661:131426-131445 | Msa1368920:intron | 25.0% |
| ! | TCAAGCTTACATATATCAAA+AGG | + | tig0018661:131478-131497 | None:intergenic | 25.0% |
| ! | CCAGTATAAATACATTGAAT+TGG | + | tig0018661:131602-131621 | None:intergenic | 25.0% |
| ! | CCAATTCAATGTATTTATAC+TGG | - | tig0018661:131599-131618 | Msa1368920:intron | 25.0% |
| !! | CATAATTATTTCTCAAGTAG+GGG | - | tig0018661:131729-131748 | Msa1368920:intron | 25.0% |
| ! | TTGCCTATTGAATTGTAAAA+TGG | - | tig0018661:131832-131851 | Msa1368920:intron | 25.0% |
| !!! | ATGCCATTTTACAATTCAAT+AGG | + | tig0018661:131838-131857 | None:intergenic | 25.0% |
| ! | AATATGGAAGTAAATTCTGA+AGG | - | tig0018661:132032-132051 | Msa1368920:intron | 25.0% |
| ! | GTATTTAGAGAATGTCAAAT+TGG | - | tig0018661:132145-132164 | Msa1368920:intron | 25.0% |
| ! | GAAAAGAGAAAGACATAAAT+TGG | - | tig0018661:132268-132287 | Msa1368920:intron | 25.0% |
| ! | AGAAATAGAGTAGATTTGAT+GGG | - | tig0018661:132580-132599 | Msa1368920:intron | 25.0% |
| ! | ATTTGAATTACGTGATTGTT+TGG | - | tig0018661:133265-133284 | Msa1368920:intron | 25.0% |
| ! | ATAAGTGTGTGATTAAACAA+GGG | + | tig0018661:133672-133691 | None:intergenic | 25.0% |
| ! | TATAAGTGTGTGATTAAACA+AGG | + | tig0018661:133673-133692 | None:intergenic | 25.0% |
| ! | GATGAATATATAAACGAAAG+AGG | - | tig0018661:134416-134435 | Msa1368920:intron | 25.0% |
| !! | ATTTTCATCTTCAGATTCTT+AGG | - | tig0018661:134516-134535 | Msa1368920:intron | 25.0% |
| ! | TGGGTAATATATGTAATGAT+TGG | - | tig0018661:135115-135134 | Msa1368920:intron | 25.0% |
| !! | AATGATTGGTGTTTAATAAG+TGG | - | tig0018661:135129-135148 | Msa1368920:intron | 25.0% |
| ! | AAATACATTCAACCTAAAAC+TGG | + | tig0018661:135562-135581 | None:intergenic | 25.0% |
| ! | TAATTGTGATCAACAATGAT+TGG | - | tig0018661:135780-135799 | Msa1368920:CDS | 25.0% |
| TTGGTTTATGTAGATAATGC+TGG | - | tig0018661:128571-128590 | Msa1368920:three_prime_UTR | 30.0% | |
| GTATTTGTGTCTTGAATGAT+CGG | - | tig0018661:128713-128732 | Msa1368920:three_prime_UTR | 30.0% | |
| ATGTAGCATGATACTTCTAT+TGG | - | tig0018661:128872-128891 | Msa1368920:exon | 30.0% | |
| ! | TTTCCAATTTTTACTGGTGT+CGG | - | tig0018661:128984-129003 | Msa1368920:intron | 30.0% |
| CCTACAATTACAATCAACAA+CGG | + | tig0018661:129138-129157 | None:intergenic | 30.0% | |
| ! | CGTTGTTGATTGTAATTGTA+GGG | - | tig0018661:129136-129155 | Msa1368920:intron | 30.0% |
| ACCGAAAGATAGATTTACTA+TGG | - | tig0018661:129463-129482 | Msa1368920:intron | 30.0% | |
| CCCATAGTAAATCTATCTTT+CGG | + | tig0018661:129467-129486 | None:intergenic | 30.0% | |
| CCGAAAGATAGATTTACTAT+GGG | - | tig0018661:129464-129483 | Msa1368920:intron | 30.0% | |
| CATACAAAATACATGGTTTG+AGG | + | tig0018661:129584-129603 | None:intergenic | 30.0% | |
| TGTGTTGCATACAAAATACA+TGG | + | tig0018661:129591-129610 | None:intergenic | 30.0% | |
| !!! | GTTGGCCAATTTTTATTTTG+TGG | - | tig0018661:129639-129658 | Msa1368920:CDS | 30.0% |
| ! | GAAAATCTGAAACAAACATG+CGG | - | tig0018661:129666-129685 | Msa1368920:CDS | 30.0% |
| ! | AAAATCTGAAACAAACATGC+GGG | - | tig0018661:129667-129686 | Msa1368920:CDS | 30.0% |
| ATTCAGCATTGTCATTGAAA+AGG | + | tig0018661:129721-129740 | None:intergenic | 30.0% | |
| TTAGATAGTAGAGTTTATGG+AGG | - | tig0018661:129818-129837 | Msa1368920:intron | 30.0% | |
| TCAAAATTTGATAGGTTACG+AGG | - | tig0018661:129989-130008 | Msa1368920:intron | 30.0% | |
| CAAAATTTGATAGGTTACGA+GGG | - | tig0018661:129990-130009 | Msa1368920:intron | 30.0% | |
| TGGATAAAGAATAAATGGGA+AGG | + | tig0018661:130023-130042 | None:intergenic | 30.0% | |
| AGGCTGGATAAAGAATAAAT+GGG | + | tig0018661:130027-130046 | None:intergenic | 30.0% | |
| AAGGCTGGATAAAGAATAAA+TGG | + | tig0018661:130028-130047 | None:intergenic | 30.0% | |
| ! | TACAGAGAAAAAGCATACTA+AGG | + | tig0018661:130258-130277 | None:intergenic | 30.0% |
| AATAAATTATGCCCTTTGTG+CGG | + | tig0018661:130466-130485 | None:intergenic | 30.0% | |
| !!! | AATGATTGGCATGCTTTTTT+AGG | - | tig0018661:130573-130592 | Msa1368920:intron | 30.0% |
| !!! | ATGATTGGCATGCTTTTTTA+GGG | - | tig0018661:130574-130593 | Msa1368920:intron | 30.0% |
| !!! | TTTTAGGGTGTGATATGTTA+TGG | - | tig0018661:130589-130608 | Msa1368920:intron | 30.0% |
| ! | TTTAGGGTGTGATATGTTAT+GGG | - | tig0018661:130590-130609 | Msa1368920:intron | 30.0% |
| ! | CTATTTCTCGTGTATTGATA+TGG | + | tig0018661:130883-130902 | None:intergenic | 30.0% |
| !!! | TGTTTTAACGTCCAATTTTG+TGG | + | tig0018661:131043-131062 | None:intergenic | 30.0% |
| ACAGTTTCTTTGTCTCTAAA+TGG | - | tig0018661:131359-131378 | Msa1368920:intron | 30.0% | |
| TTCAAGAAAAATAACGAGCA+TGG | - | tig0018661:131639-131658 | Msa1368920:intron | 30.0% | |
| AACTACCTCAAAGCAAATTA+AGG | + | tig0018661:131670-131689 | None:intergenic | 30.0% | |
| TTGTAAAATGGCATCTATAC+TGG | - | tig0018661:131844-131863 | Msa1368920:intron | 30.0% | |
| !!! | TGAATTGTTTTTACTTGTGC+AGG | - | tig0018661:131937-131956 | Msa1368920:intron | 30.0% |
| TTACTACACATTTGACAGTT+TGG | + | tig0018661:132100-132119 | None:intergenic | 30.0% | |
| TTCTCTAAATACATGATGAG+AGG | + | tig0018661:132137-132156 | None:intergenic | 30.0% | |
| AGAATGTCAAATTGGTAAAG+AGG | - | tig0018661:132153-132172 | Msa1368920:intron | 30.0% | |
| ! | AAATTGGTCTAAAACACTTG+CGG | - | tig0018661:132284-132303 | Msa1368920:intron | 30.0% |
| TTGAACAGTGTCATAAATGT+TGG | + | tig0018661:132371-132390 | None:intergenic | 30.0% | |
| GAGAAATAGAGTAGATTTGA+TGG | - | tig0018661:132579-132598 | Msa1368920:intron | 30.0% | |
| CACATTTGACATGAAATTGT+TGG | - | tig0018661:133296-133315 | Msa1368920:intron | 30.0% | |
| TGTATTGGATGTTTGTTTGA+GGG | - | tig0018661:133867-133886 | Msa1368920:intron | 30.0% | |
| AATGAAACACTGAGTGTAAA+AGG | + | tig0018661:133950-133969 | None:intergenic | 30.0% | |
| TTCATCACTCTGAATGTTAT+GGG | + | tig0018661:134402-134421 | None:intergenic | 30.0% | |
| ATTCATCACTCTGAATGTTA+TGG | + | tig0018661:134403-134422 | None:intergenic | 30.0% | |
| ! | TTATTAAAACGCGCTTTTGT+AGG | + | tig0018661:134559-134578 | None:intergenic | 30.0% |
| !! | CGATTTTCATTTTGTTTCTC+AGG | - | tig0018661:134580-134599 | Msa1368920:intron | 30.0% |
| TTACCTTTCATTTCTCCTTT+GGG | + | tig0018661:135026-135045 | None:intergenic | 30.0% | |
| TTTACCTTTCATTTCTCCTT+TGG | + | tig0018661:135027-135046 | None:intergenic | 30.0% | |
| TCAGTATTAAAATTGGTTGG+AGG | - | tig0018661:135304-135323 | Msa1368920:intron | 30.0% | |
| ATTAAAATTGGTTGGAGGAT+CGG | - | tig0018661:135309-135328 | Msa1368920:intron | 30.0% | |
| !! | TATGTTTTTATCGCCGTTTT+TGG | - | tig0018661:135345-135364 | Msa1368920:intron | 30.0% |
| CACAACATCAAAACCAAAAA+CGG | + | tig0018661:135361-135380 | None:intergenic | 30.0% | |
| !! | TTCGTGTTGATTGTAATTGT+AGG | - | tig0018661:135404-135423 | Msa1368920:intron | 30.0% |
| !! | TCGTGTTGATTGTAATTGTA+GGG | - | tig0018661:135405-135424 | Msa1368920:intron | 30.0% |
| ! | ATTTGATGTTGTCCAGTTTT+AGG | - | tig0018661:135547-135566 | Msa1368920:intron | 30.0% |
| !! | ACAAACAACTCTTTAGAACT+AGG | + | tig0018661:135655-135674 | None:intergenic | 30.0% |
| TCTCAAGATCAAATAACTGA+TGG | + | tig0018661:135733-135752 | None:intergenic | 30.0% | |
| !! | TTTTGCTAATCGATTCATCA+AGG | - | tig0018661:135803-135822 | Msa1368920:CDS | 30.0% |
| ! | TTTGCTAATCGATTCATCAA+GGG | - | tig0018661:135804-135823 | Msa1368920:CDS | 30.0% |
| !! | TGGTGTTATTGTGAATCCTA+AGG | - | tig0018661:128591-128610 | Msa1368920:three_prime_UTR | 35.0% |
| !! | GGTGTTATTGTGAATCCTAA+GGG | - | tig0018661:128592-128611 | Msa1368920:three_prime_UTR | 35.0% |
| AATCCTAAGGGTGAAATGAA+AGG | - | tig0018661:128604-128623 | Msa1368920:three_prime_UTR | 35.0% | |
| TTACCTTTCATTTCACCCTT+AGG | + | tig0018661:128610-128629 | None:intergenic | 35.0% | |
| ! | TATGTTTGGTATCGTGCTTT+TGG | - | tig0018661:129095-129114 | Msa1368920:intron | 35.0% |
| ! | CCGTTGTTGATTGTAATTGT+AGG | - | tig0018661:129135-129154 | Msa1368920:intron | 35.0% |
| ATTGTAGGGTCTTCTATTAC+TGG | - | tig0018661:129150-129169 | Msa1368920:intron | 35.0% | |
| TCTTCTATTACTGGTCCAAT+TGG | - | tig0018661:129159-129178 | Msa1368920:intron | 35.0% | |
| CTTCTATTACTGGTCCAATT+GGG | - | tig0018661:129160-129179 | Msa1368920:intron | 35.0% | |
| !!! | TTCGTCTCTGGTTTTGTTTT+GGG | - | tig0018661:129241-129260 | Msa1368920:intron | 35.0% |
| TAAATGGGAACTGCAGAAAA+AGG | + | tig0018661:129558-129577 | None:intergenic | 35.0% | |
| ! | CATGGTTTGAGGTTGTAAAT+GGG | + | tig0018661:129573-129592 | None:intergenic | 35.0% |
| ! | ACATGGTTTGAGGTTGTAAA+TGG | + | tig0018661:129574-129593 | None:intergenic | 35.0% |
| !!! | CAAGTTTTTCTAAAGCTACC+TGG | - | tig0018661:129609-129628 | Msa1368920:CDS | 35.0% |
| AGTTGCTCTCTATAGCTAAT+GGG | + | tig0018661:130051-130070 | None:intergenic | 35.0% | |
| TAGAGCACGTCAAATTTAAG+AGG | + | tig0018661:130106-130125 | None:intergenic | 35.0% | |
| TGAAACACCCCTATTTGATT+CGG | - | tig0018661:130307-130326 | Msa1368920:intron | 35.0% | |
| TTCCTGAACCGAATCAAATA+GGG | + | tig0018661:130318-130337 | None:intergenic | 35.0% | |
| AATCCGAAGAAGAGAATGAT+TGG | - | tig0018661:130559-130578 | Msa1368920:intron | 35.0% | |
| ATGCCAATCATTCTCTTCTT+CGG | + | tig0018661:130565-130584 | None:intergenic | 35.0% | |
| TGCTATATTGTTTACCCTTC+CGG | + | tig0018661:130661-130680 | None:intergenic | 35.0% | |
| CATCATCTTGAGTCATTAGA+CGG | - | tig0018661:130700-130719 | Msa1368920:intron | 35.0% | |
| GGCAAAAACAAAATGTGAAC+TGG | - | tig0018661:130756-130775 | Msa1368920:intron | 35.0% | |
| CGAGAAAAACTTGTATGTTG+GGG | + | tig0018661:130859-130878 | None:intergenic | 35.0% | |
| CCGAGAAAAACTTGTATGTT+GGG | + | tig0018661:130860-130879 | None:intergenic | 35.0% | |
| ! | CCCAACATACAAGTTTTTCT+CGG | - | tig0018661:130857-130876 | Msa1368920:intron | 35.0% |
| ! | TAACGTCCAATTTTGTGGAA+CGG | + | tig0018661:131038-131057 | None:intergenic | 35.0% |
| CACGTTTAACTAAACAGGAT+AGG | - | tig0018661:131103-131122 | Msa1368920:intron | 35.0% | |
| GTTTAACTAAACAGGATAGG+AGG | - | tig0018661:131106-131125 | Msa1368920:intron | 35.0% | |
| !! | CAAGACCTTAATTTGCTTTG+AGG | - | tig0018661:131662-131681 | Msa1368920:intron | 35.0% |
| ! | ATTATTTCTCAAGTAGGGGA+TGG | - | tig0018661:131733-131752 | Msa1368920:intron | 35.0% |
| !!! | TATACTGGTAAGTTGGCTTT+TGG | - | tig0018661:131859-131878 | Msa1368920:intron | 35.0% |
| !! | ATTAGTCTGTCGAGCTTTTT+CGG | - | tig0018661:132005-132024 | Msa1368920:intron | 35.0% |
| !! | TTGGATTGGTTGACATGTAT+CGG | + | tig0018661:132081-132100 | None:intergenic | 35.0% |
| ACACATTTGACAGTTTGGAT+TGG | + | tig0018661:132095-132114 | None:intergenic | 35.0% | |
| TCTAAATACATGATGAGAGG+TGG | + | tig0018661:132134-132153 | None:intergenic | 35.0% | |
| ATGTCAAATTGGTAAAGAGG+TGG | - | tig0018661:132156-132175 | Msa1368920:intron | 35.0% | |
| TGTCAAATTGGTAAAGAGGT+GGG | - | tig0018661:132157-132176 | Msa1368920:intron | 35.0% | |
| CGACTTGAGTTCAATATAAC+AGG | - | tig0018661:132243-132262 | Msa1368920:intron | 35.0% | |
| TAAAACACTTGCGGTAACTT+TGG | - | tig0018661:132293-132312 | Msa1368920:intron | 35.0% | |
| CGGAACATACATCTTACTAA+GGG | - | tig0018661:132484-132503 | Msa1368920:intron | 35.0% | |
| TGTGAGAATAAAGTGAGAAG+AGG | - | tig0018661:132517-132536 | Msa1368920:intron | 35.0% | |
| GTGAGAATAAAGTGAGAAGA+GGG | - | tig0018661:132518-132537 | Msa1368920:intron | 35.0% | |
| !! | AGTAGATTTGATGGGTTGTT+TGG | - | tig0018661:132588-132607 | Msa1368920:intron | 35.0% |
| GGCACAAATTTGTCATATTG+TGG | + | tig0018661:132956-132975 | None:intergenic | 35.0% | |
| TTATCCTTAGGTAGTTCCTT+GGG | + | tig0018661:132986-133005 | None:intergenic | 35.0% | |
| AAGGAACTACCTAAGGATAA+GGG | - | tig0018661:132986-133005 | Msa1368920:intron | 35.0% | |
| CCATATATACCCTTATCCTT+AGG | + | tig0018661:132998-133017 | None:intergenic | 35.0% | |
| ! | CCTAAGGATAAGGGTATATA+TGG | - | tig0018661:132995-133014 | Msa1368920:intron | 35.0% |
| TGTGAGAAGAAAGCAAAAAG+TGG | - | tig0018661:133062-133081 | Msa1368920:intron | 35.0% | |
| AGAAGAAAGCAAAAAGTGGT+AGG | - | tig0018661:133066-133085 | Msa1368920:intron | 35.0% | |
| GAAGAAAGCAAAAAGTGGTA+GGG | - | tig0018661:133067-133086 | Msa1368920:intron | 35.0% | |
| AATGAGCAATTTCTCGTGTT+TGG | + | tig0018661:133134-133153 | None:intergenic | 35.0% | |
| ACAAGTTAAGGTTCCAAAGA+TGG | - | tig0018661:133524-133543 | Msa1368920:intron | 35.0% | |
| AAACCTTAACATGTGTCCTA+AGG | - | tig0018661:133630-133649 | Msa1368920:intron | 35.0% | |
| GTGTATTGGATGTTTGTTTG+AGG | - | tig0018661:133866-133885 | Msa1368920:intron | 35.0% | |
| GTATTGGATGTTTGTTTGAG+GGG | - | tig0018661:133868-133887 | Msa1368920:intron | 35.0% | |
| ! | GAATGTAACATCGGAAGTTT+TGG | - | tig0018661:133890-133909 | Msa1368920:intron | 35.0% |
| CACTACTCTCTAAATCGTTT+AGG | + | tig0018661:133974-133993 | None:intergenic | 35.0% | |
| CTAAACGATTTAGAGAGTAG+TGG | - | tig0018661:133972-133991 | Msa1368920:intron | 35.0% | |
| AGGAGTTTGGCAAAGAAATA+TGG | - | tig0018661:134336-134355 | Msa1368920:intron | 35.0% | |
| AAACGAAAGAGGATTGAGTT+AGG | - | tig0018661:134427-134446 | Msa1368920:intron | 35.0% | |
| AACGAAAGAGGATTGAGTTA+GGG | - | tig0018661:134428-134447 | Msa1368920:intron | 35.0% | |
| !! | ATTTCCGTCAAAGGTATCAA+AGG | - | tig0018661:134706-134725 | Msa1368920:intron | 35.0% |
| !! | GGTGTTATTGTTAATCCCAA+AGG | - | tig0018661:135008-135027 | Msa1368920:intron | 35.0% |
| AATCCCAAAGGAGAAATGAA+AGG | - | tig0018661:135020-135039 | Msa1368920:intron | 35.0% | |
| ATGATAATATCGACGTAGGT+GGG | - | tig0018661:135096-135115 | Msa1368920:intron | 35.0% | |
| ACTGCTGTGTCTTCAATAAT+TGG | - | tig0018661:135211-135230 | Msa1368920:CDS | 35.0% | |
| TTAAAATTGGTTGGAGGATC+GGG | - | tig0018661:135310-135329 | Msa1368920:intron | 35.0% | |
| !! | GGTTTTGATGTTGTGCTTTT+AGG | - | tig0018661:135366-135385 | Msa1368920:intron | 35.0% |
| GTTTATTCTTGTGCAATCTG+TGG | - | tig0018661:135675-135694 | Msa1368920:intron | 35.0% | |
| ! | ATGGTGCATTGATATGCAAA+TGG | + | tig0018661:135714-135733 | None:intergenic | 35.0% |
| ! | ATCGATTCATCAAGGGAATT+TGG | - | tig0018661:135811-135830 | Msa1368920:CDS | 35.0% |
| TCGATTCATCAAGGGAATTT+GGG | - | tig0018661:135812-135831 | Msa1368920:CDS | 35.0% | |
| TGTTCAGACGTGACACATAT+TGG | - | tig0018661:128912-128931 | Msa1368920:CDS | 40.0% | |
| CGTGACACATATTGGTGTAT+CGG | - | tig0018661:128920-128939 | Msa1368920:CDS | 40.0% | |
| ! | ACATATTGGTGTATCGGTGT+AGG | - | tig0018661:128926-128945 | Msa1368920:CDS | 40.0% |
| ACTCCGACACCAGTAAAAAT+TGG | + | tig0018661:128990-129009 | None:intergenic | 40.0% | |
| ! | ACAAAGCATCCACATAGGAA+CGG | + | tig0018661:129015-129034 | None:intergenic | 40.0% |
| ! | CAACTACAAAGCATCCACAT+AGG | + | tig0018661:129020-129039 | None:intergenic | 40.0% |
| CTATGTGGATGCTTTGTAGT+TGG | - | tig0018661:129018-129037 | Msa1368920:intron | 40.0% | |
| TATTACTGGTCCAATTGGGA+AGG | - | tig0018661:129164-129183 | Msa1368920:intron | 40.0% | |
| !!! | GTTCGTCTCTGGTTTTGTTT+TGG | - | tig0018661:129240-129259 | Msa1368920:intron | 40.0% |
| ! | ACATTCTCGGAGAGTCTTAT+TGG | - | tig0018661:129514-129533 | Msa1368920:CDS | 40.0% |
| TACAAGTGAACCCTCTTACT+AGG | - | tig0018661:129869-129888 | Msa1368920:intron | 40.0% | |
| CAGTTGCTCTCTATAGCTAA+TGG | + | tig0018661:130052-130071 | None:intergenic | 40.0% | |
| TCCTGAACCGAATCAAATAG+GGG | + | tig0018661:130317-130336 | None:intergenic | 40.0% | |
| CTTCCTGAACCGAATCAAAT+AGG | + | tig0018661:130319-130338 | None:intergenic | 40.0% | |
| !! | TGATTCGGTTCAGGAAGATA+AGG | - | tig0018661:130322-130341 | Msa1368920:intron | 40.0% |
| !! | TTCAGGAAGATAAGGTGTTG+TGG | - | tig0018661:130330-130349 | Msa1368920:intron | 40.0% |
| !! | AAGATAAGGTGTTGTGGAGT+GGG | - | tig0018661:130336-130355 | Msa1368920:intron | 40.0% |
| CTTCAAAATAGTGCGGTAAC+TGG | + | tig0018661:130378-130397 | None:intergenic | 40.0% | |
| !! | CAGTTACCGCACTATTTTGA+AGG | - | tig0018661:130376-130395 | Msa1368920:intron | 40.0% |
| GAGGTTCCTTCAAAATAGTG+CGG | + | tig0018661:130385-130404 | None:intergenic | 40.0% | |
| TTTGAAGGAACCTCCTCATT+CGG | - | tig0018661:130391-130410 | Msa1368920:intron | 40.0% | |
| AGTTACAAGCGAGTGAAGAT+TGG | - | tig0018661:130416-130435 | Msa1368920:intron | 40.0% | |
| AAGCGAGTGAAGATTGGATT+AGG | - | tig0018661:130422-130441 | Msa1368920:intron | 40.0% | |
| ! | GTGAAGATTGGATTAGGCTT+TGG | - | tig0018661:130428-130447 | Msa1368920:intron | 40.0% |
| !! | AGATTGGATTAGGCTTTGGA+AGG | - | tig0018661:130432-130451 | Msa1368920:intron | 40.0% |
| AAGGTTAATGATCCGCACAA+AGG | - | tig0018661:130451-130470 | Msa1368920:intron | 40.0% | |
| AGGTTAATGATCCGCACAAA+GGG | - | tig0018661:130452-130471 | Msa1368920:intron | 40.0% | |
| AAAGACATGTCAATTGTCCG+CGG | - | tig0018661:130532-130551 | Msa1368920:intron | 40.0% | |
| !! | GCTATTTTCCTGTCTAGAAC+CGG | - | tig0018661:130639-130658 | Msa1368920:intron | 40.0% |
| ACAAAATGTGAACTGGTCCT+AGG | - | tig0018661:130763-130782 | Msa1368920:intron | 40.0% | |
| ! | TAATTGTTGTTGCGGATGAC+CGG | - | tig0018661:130798-130817 | Msa1368920:intron | 40.0% |
| ! | GCGGGATAATTCTTTAGTTC+CGG | + | tig0018661:130820-130839 | None:intergenic | 40.0% |
| GCCGAGAAAAACTTGTATGT+TGG | + | tig0018661:130861-130880 | None:intergenic | 40.0% | |
| !! | AAGGAAAGGTGTTGAAAGAG+TGG | - | tig0018661:131078-131097 | Msa1368920:intron | 40.0% |
| TGAATATCTCAGTAGCAAGC+TGG | - | tig0018661:131220-131239 | Msa1368920:intron | 40.0% | |
| TCAGTAGCAAGCTGGAAAAT+AGG | - | tig0018661:131228-131247 | Msa1368920:intron | 40.0% | |
| ACATATAAAGGTTGAGCGAG+TGG | - | tig0018661:131550-131569 | Msa1368920:intron | 40.0% | |
| ! | TTTCTTTGATTCGCGAGTGA+GGG | + | tig0018661:131706-131725 | None:intergenic | 40.0% |
| !! | TTTTCTTTGATTCGCGAGTG+AGG | + | tig0018661:131707-131726 | None:intergenic | 40.0% |
| TGGCATCTATACTGGTAAGT+TGG | - | tig0018661:131852-131871 | Msa1368920:intron | 40.0% | |
| CTAGGAACATGTTCAGTAAC+TGG | + | tig0018661:131889-131908 | None:intergenic | 40.0% | |
| !!! | GAGCTTTTTCGGTGCAAATA+TGG | - | tig0018661:132016-132035 | Msa1368920:intron | 40.0% |
| GTCAAATTGGTAAAGAGGTG+GGG | - | tig0018661:132158-132177 | Msa1368920:intron | 40.0% | |
| AGATGTATGTTCCGCCTATA+GGG | + | tig0018661:132478-132497 | None:intergenic | 40.0% | |
| AAGATGTATGTTCCGCCTAT+AGG | + | tig0018661:132479-132498 | None:intergenic | 40.0% | |
| GCGGAACATACATCTTACTA+AGG | - | tig0018661:132483-132502 | Msa1368920:intron | 40.0% | |
| ! | CATCTTACTAAGGGTGTGTT+TGG | - | tig0018661:132493-132512 | Msa1368920:intron | 40.0% |
| TAAAGTGAGAAGAGGGAGAT+AGG | - | tig0018661:132525-132544 | Msa1368920:intron | 40.0% | |
| ! | AGATAGGTGAGAGAGAGTAT+GGG | - | tig0018661:132541-132560 | Msa1368920:intron | 40.0% |
| CTTATCCTTAGGTAGTTCCT+TGG | + | tig0018661:132987-133006 | None:intergenic | 40.0% | |
| CAAGGAACTACCTAAGGATA+AGG | - | tig0018661:132985-133004 | Msa1368920:intron | 40.0% | |
| GAAGAGAGGAAGGATATATG+TGG | + | tig0018661:133094-133113 | None:intergenic | 40.0% | |
| TGTTTGGAAGGAGAGAGTTA+GGG | + | tig0018661:133221-133240 | None:intergenic | 40.0% | |
| TCTCTTACACTGTGTTTGGA+AGG | + | tig0018661:133233-133252 | None:intergenic | 40.0% | |
| GAACTCTCTTACACTGTGTT+TGG | + | tig0018661:133237-133256 | None:intergenic | 40.0% | |
| AAATGTTAACACGTGCCCTT+AGG | - | tig0018661:133496-133515 | Msa1368920:intron | 40.0% | |
| TGACCTTAGGACACATGTTA+AGG | + | tig0018661:133636-133655 | None:intergenic | 40.0% | |
| TCTCAGTCACTCAAAAGGAA+TGG | + | tig0018661:133841-133860 | None:intergenic | 40.0% | |
| GTTTGAGGGGAATGTAACAT+CGG | - | tig0018661:133881-133900 | Msa1368920:intron | 40.0% | |
| TAGAGAGTAGTGGCATTACT+TGG | - | tig0018661:133982-134001 | Msa1368920:intron | 40.0% | |
| ATGGATCTAACGTGCAGTAA+TGG | - | tig0018661:134355-134374 | Msa1368920:intron | 40.0% | |
| TGGATCTAACGTGCAGTAAT+GGG | - | tig0018661:134356-134375 | Msa1368920:intron | 40.0% | |
| GGGCTTTCAATTCTTATACC+CGG | + | tig0018661:134382-134401 | None:intergenic | 40.0% | |
| !! | TCATTTTGTTTCTCAGGTCG+CGG | - | tig0018661:134586-134605 | Msa1368920:intron | 40.0% |
| TAACAAGTTCAGGATGTCAC+TGG | - | tig0018661:134621-134640 | Msa1368920:intron | 40.0% | |
| AACAAGTTCAGGATGTCACT+GGG | - | tig0018661:134622-134641 | Msa1368920:intron | 40.0% | |
| !! | ATTCTTAGCTCCGGTGTTAT+CGG | + | tig0018661:134677-134696 | None:intergenic | 40.0% |
| GATGTAGAGATTCTTAGCTC+CGG | + | tig0018661:134686-134705 | None:intergenic | 40.0% | |
| CTCTACATCATTTCCGTCAA+AGG | - | tig0018661:134697-134716 | Msa1368920:intron | 40.0% | |
| CCTTCCTTTGATACCTTTGA+CGG | + | tig0018661:134713-134732 | None:intergenic | 40.0% | |
| ACATGAAAACACCGTCCTTT+CGG | + | tig0018661:134858-134877 | None:intergenic | 40.0% | |
| ! | GGTGTTTTCATGTACTTCGA+AGG | - | tig0018661:134865-134884 | Msa1368920:intron | 40.0% |
| TTGTATTGTGCAGACAATGC+TGG | - | tig0018661:134987-135006 | Msa1368920:intron | 40.0% | |
| CTACGTCGATATTATCATCG+TGG | + | tig0018661:135094-135113 | None:intergenic | 40.0% | |
| CACGATGATAATATCGACGT+AGG | - | tig0018661:135092-135111 | Msa1368920:intron | 40.0% | |
| GATGATAATATCGACGTAGG+TGG | - | tig0018661:135095-135114 | Msa1368920:intron | 40.0% | |
| TTGTTGTACTGCGAAGTCTT+TGG | - | tig0018661:135617-135636 | Msa1368920:intron | 40.0% | |
| CATTGATATGCAAATGGCAC+AGG | + | tig0018661:135708-135727 | None:intergenic | 40.0% | |
| ATCGGTGTAGGACACAACAT+TGG | - | tig0018661:128938-128957 | Msa1368920:CDS | 45.0% | |
| TTAGCAGCACTTGCAATCCT+AGG | + | tig0018661:129207-129226 | None:intergenic | 45.0% | |
| CTATTGTTGACGTTCGTCTC+TGG | - | tig0018661:129229-129248 | Msa1368920:intron | 45.0% | |
| CGTTTCTGTGTATGTGTGTG+TGG | - | tig0018661:129398-129417 | Msa1368920:intron | 45.0% | |
| CTGTGTATGTGTGTGTGGAA+AGG | - | tig0018661:129403-129422 | Msa1368920:intron | 45.0% | |
| ! | TCTAAAGCTACCTGGTAGCT+CGG | - | tig0018661:129617-129636 | Msa1368920:CDS | 45.0% |
| TCTATAGCTAATGGGAAGGC+TGG | + | tig0018661:130043-130062 | None:intergenic | 45.0% | |
| GCTCTCTATAGCTAATGGGA+AGG | + | tig0018661:130047-130066 | None:intergenic | 45.0% | |
| GAGAGCAACTGATTGCGATT+TGG | - | tig0018661:130061-130080 | Msa1368920:intron | 45.0% | |
| !! | ACCCCTATTTGATTCGGTTC+AGG | - | tig0018661:130313-130332 | Msa1368920:intron | 45.0% |
| !! | GAAGATAAGGTGTTGTGGAG+TGG | - | tig0018661:130335-130354 | Msa1368920:intron | 45.0% |
| GTTGTGGAGTGGGATGTATT+TGG | - | tig0018661:130346-130365 | Msa1368920:intron | 45.0% | |
| TTGTAACTAGCCGAATGAGG+AGG | + | tig0018661:130404-130423 | None:intergenic | 45.0% | |
| GTGATATGTTATGGGAGAGC+TGG | - | tig0018661:130598-130617 | Msa1368920:intron | 45.0% | |
| !! | TTTTCCTGTCTAGAACCGGA+AGG | - | tig0018661:130643-130662 | Msa1368920:intron | 45.0% |
| ! | TTTCCTGTCTAGAACCGGAA+GGG | - | tig0018661:130644-130663 | Msa1368920:intron | 45.0% |
| GGAGTTGCATGTTATCTTGC+GGG | + | tig0018661:130838-130857 | None:intergenic | 45.0% | |
| GGGAGTTGCATGTTATCTTG+CGG | + | tig0018661:130839-130858 | None:intergenic | 45.0% | |
| ! | CAATTTTGTGGAACGGTCAC+AGG | + | tig0018661:131031-131050 | None:intergenic | 45.0% |
| CTGTGACCGTTCCACAAAAT+TGG | - | tig0018661:131029-131048 | Msa1368920:intron | 45.0% | |
| TGGCGCACGTTTAACTAAAC+AGG | - | tig0018661:131098-131117 | Msa1368920:intron | 45.0% | |
| TTCTCAAGTAGGGGATGGAT+CGG | - | tig0018661:131738-131757 | Msa1368920:intron | 45.0% | |
| ! | ATTGGTTGACATGTATCGGC+GGG | + | tig0018661:132077-132096 | None:intergenic | 45.0% |
| ! | GATTGGTTGACATGTATCGG+CGG | + | tig0018661:132078-132097 | None:intergenic | 45.0% |
| ! | ACATGATGAGAGGTGGATTC+TGG | + | tig0018661:132127-132146 | None:intergenic | 45.0% |
| TTACACCATCCCAAGCAAGA+CGG | + | tig0018661:132423-132442 | None:intergenic | 45.0% | |
| GATGTATGTTCCGCCTATAG+GGG | + | tig0018661:132477-132496 | None:intergenic | 45.0% | |
| GAGATAGGTGAGAGAGAGTA+TGG | - | tig0018661:132540-132559 | Msa1368920:intron | 45.0% | |
| GTGTTTGGAAGGAGAGAGTT+AGG | + | tig0018661:133222-133241 | None:intergenic | 45.0% | |
| !! | CTTAACTTGTGCCCTCCTAA+GGG | + | tig0018661:133514-133533 | None:intergenic | 45.0% |
| ! | TCGTGCTAACTTGTGACCTT+AGG | + | tig0018661:133649-133668 | None:intergenic | 45.0% |
| CTGTCTCTCAGTCACTCAAA+AGG | + | tig0018661:133846-133865 | None:intergenic | 45.0% | |
| !! | CTTTTGAGTGACTGAGAGAC+AGG | - | tig0018661:133844-133863 | Msa1368920:intron | 45.0% |
| TGACTGAGAGACAGGTGTAT+TGG | - | tig0018661:133852-133871 | Msa1368920:intron | 45.0% | |
| !! | CCGTCAAAGGTATCAAAGGA+AGG | - | tig0018661:134710-134729 | Msa1368920:intron | 45.0% |
| ATCAGGCTTACCCTTCTTCA+CGG | + | tig0018661:134782-134801 | None:intergenic | 45.0% | |
| TAAGCCTGATCTCCGTAAGA+AGG | - | tig0018661:134792-134811 | Msa1368920:intron | 45.0% | |
| ATTGTAGGGTCTGCTATCAC+TGG | - | tig0018661:135419-135438 | Msa1368920:intron | 45.0% | |
| TCTGCTATCACTGGTCCAAT+CGG | - | tig0018661:135428-135447 | Msa1368920:intron | 45.0% | |
| TTAGCAGCACTTGCAATCCT+AGG | + | tig0018661:129207-129226 | None:intergenic | 45.0% | |
| !!! | ATTTATTTTTTTATAATTCA+AGG | + | tig0018661:129954-129973 | None:intergenic | 5.0% |
| !!! | AAAATTTAATTTAATTGTTT+TGG | + | tig0018661:131329-131348 | None:intergenic | 5.0% |
| !! | AATTACTATTTAAAAAAAAT+TGG | + | tig0018661:132210-132229 | None:intergenic | 5.0% |
| !!! | TTTTAGTTTAAAAAAAATAA+GGG | + | tig0018661:133762-133781 | None:intergenic | 5.0% |
| !!! | ATTTTAGTTTAAAAAAAATA+AGG | + | tig0018661:133763-133782 | None:intergenic | 5.0% |
| TCAGCACACTCCTTCCCAAT+TGG | + | tig0018661:129177-129196 | None:intergenic | 50.0% | |
| !! | GGAAGGAGTGTGCTGATTTG+TGG | - | tig0018661:129181-129200 | Msa1368920:intron | 50.0% |
| !! | AGTGTGCTGATTTGTGGCCT+AGG | - | tig0018661:129187-129206 | Msa1368920:intron | 50.0% |
| CGCTTGTAACTAGCCGAATG+AGG | + | tig0018661:130407-130426 | None:intergenic | 50.0% | |
| TCTTCTTCGGATTCACACCG+CGG | + | tig0018661:130552-130571 | None:intergenic | 50.0% | |
| !! | TTACCCTTCCGGTTCTAGAC+AGG | + | tig0018661:130650-130669 | None:intergenic | 50.0% |
| !! | CGGTAACTTTGGAGTGCACT+TGG | - | tig0018661:132304-132323 | Msa1368920:intron | 50.0% |
| AGGAATTGTCCCGTCTTGCT+TGG | - | tig0018661:132410-132429 | Msa1368920:intron | 50.0% | |
| GGAATTGTCCCGTCTTGCTT+GGG | - | tig0018661:132411-132430 | Msa1368920:intron | 50.0% | |
| TACACCATCCCAAGCAAGAC+GGG | + | tig0018661:132422-132441 | None:intergenic | 50.0% | |
| ATTTGTGCCCATGTCTCCCA+AGG | - | tig0018661:132967-132986 | Msa1368920:intron | 50.0% | |
| GGTAGTTCCTTGGGAGACAT+GGG | + | tig0018661:132977-132996 | None:intergenic | 50.0% | |
| AGGTAGTTCCTTGGGAGACA+TGG | + | tig0018661:132978-132997 | None:intergenic | 50.0% | |
| GTCTCCCAAGGAACTACCTA+AGG | - | tig0018661:132979-132998 | Msa1368920:intron | 50.0% | |
| GAGAGATGCTGAAGAGAGGA+AGG | + | tig0018661:133104-133123 | None:intergenic | 50.0% | |
| TGCAGAGAGATGCTGAAGAG+AGG | + | tig0018661:133108-133127 | None:intergenic | 50.0% | |
| TGTTAACACGTGCCCTTAGG+AGG | - | tig0018661:133499-133518 | Msa1368920:intron | 50.0% | |
| GTTAACACGTGCCCTTAGGA+GGG | - | tig0018661:133500-133519 | Msa1368920:intron | 50.0% | |
| !! | CCTTAACTTGTGCCCTCCTA+AGG | + | tig0018661:133515-133534 | None:intergenic | 50.0% |
| ! | CCTTAGGAGGGCACAAGTTA+AGG | - | tig0018661:133512-133531 | Msa1368920:intron | 50.0% |
| !! | TCTAACGTGCAGTAATGGGC+CGG | - | tig0018661:134360-134379 | Msa1368920:intron | 50.0% |
| !! | TTTTGTTTCTCAGGTCGCGG+AGG | - | tig0018661:134589-134608 | Msa1368920:intron | 50.0% |
| !! | CATCCTGAACTTGTTACCCG+CGG | + | tig0018661:134617-134636 | None:intergenic | 50.0% |
| ! | GTGAATTGCGCCGATAACAC+CGG | - | tig0018661:134664-134683 | Msa1368920:intron | 50.0% |
| CAACGCAAGCAGAAGGCAAA+CGG | + | tig0018661:134741-134760 | None:intergenic | 50.0% | |
| ATGTCACCAACGCAAGCAGA+AGG | + | tig0018661:134748-134767 | None:intergenic | 50.0% | |
| !! | TTCTGCTTGCGTTGGTGACA+TGG | - | tig0018661:134747-134766 | Msa1368920:intron | 50.0% |
| !! | TTGCGTTGGTGACATGGTGA+TGG | - | tig0018661:134753-134772 | Msa1368920:intron | 50.0% |
| AGCACCTTCTTACGGAGATC+AGG | + | tig0018661:134799-134818 | None:intergenic | 50.0% | |
| TTTACGCTGGCGAACGATGA+CGG | + | tig0018661:134827-134846 | None:intergenic | 50.0% | |
| CTGCTATCACTGGTCCAATC+GGG | - | tig0018661:135429-135448 | Msa1368920:intron | 50.0% | |
| TATCACTGGTCCAATCGGGA+AGG | - | tig0018661:135433-135452 | Msa1368920:intron | 50.0% | |
| ! | GGAAGGAGTGTGCTGATCTA+TGG | - | tig0018661:135450-135469 | Msa1368920:intron | 50.0% |
| ! | AGTGTGCTGATCTATGGCCT+AGG | - | tig0018661:135456-135475 | Msa1368920:intron | 50.0% |
| ! | TCGGAGTGTCCGTTCCTATG+TGG | - | tig0018661:129003-129022 | Msa1368920:intron | 55.0% |
| AAGCTACCTGGTAGCTCGGT+TGG | - | tig0018661:129621-129640 | Msa1368920:CDS | 55.0% | |
| AATTGGCCAACCGAGCTACC+AGG | + | tig0018661:129630-129649 | None:intergenic | 55.0% | |
| TGGGAGAGCTGGTACTTTGC+TGG | - | tig0018661:130609-130628 | Msa1368920:intron | 55.0% | |
| ! | TTTGATTCGCGAGTGAGGGC+AGG | + | tig0018661:131702-131721 | None:intergenic | 55.0% |
| ! | TGTATCGGCGGGCTCTTTCA+AGG | + | tig0018661:132066-132085 | None:intergenic | 55.0% |
| TTGTCCCGTCTTGCTTGGGA+TGG | - | tig0018661:132415-132434 | Msa1368920:intron | 55.0% | |
| TATAGGGGCAGACCTGTGTG+AGG | + | tig0018661:132462-132481 | None:intergenic | 55.0% | |
| TCACACAGGTCTGCCCCTAT+AGG | - | tig0018661:132461-132480 | Msa1368920:intron | 55.0% | |
| !! | CTAACGTGCAGTAATGGGCC+GGG | - | tig0018661:134361-134380 | Msa1368920:intron | 55.0% |
| GCAGCAGCAATGTCGAAGAG+AGG | - | tig0018661:134484-134503 | Msa1368920:intron | 55.0% | |
| GATCCGCGGGTAACAAGTTC+AGG | - | tig0018661:134611-134630 | Msa1368920:intron | 55.0% | |
| GATGTCACTGGGTCTACCAG+TGG | - | tig0018661:134633-134652 | Msa1368920:intron | 55.0% | |
| CGTTTGCCTTCTGCTTGCGT+TGG | - | tig0018661:134739-134758 | Msa1368920:intron | 55.0% | |
| GTGATGGCCACCGTGAAGAA+GGG | - | tig0018661:134769-134788 | Msa1368920:intron | 55.0% | |
| AGGCTTACCCTTCTTCACGG+TGG | + | tig0018661:134779-134798 | None:intergenic | 55.0% | |
| !! | CGGCAGGAAGCACCTTCTTA+CGG | + | tig0018661:134807-134826 | None:intergenic | 55.0% |
| TCGTTCGCCAGCGTAAACCA+TGG | - | tig0018661:134830-134849 | Msa1368920:intron | 55.0% | |
| ! | AAACCATGGCGCCGAAAGGA+CGG | - | tig0018661:134844-134863 | Msa1368920:intron | 55.0% |
| TCAGCACACTCCTTCCCGAT+TGG | + | tig0018661:135446-135465 | None:intergenic | 55.0% | |
| AGCCACACCAAGCCTCACAC+AGG | - | tig0018661:132447-132466 | Msa1368920:intron | 60.0% | |
| !! | GACCTGTGTGAGGCTTGGTG+TGG | + | tig0018661:132452-132471 | None:intergenic | 60.0% |
| CACAGGTCTGCCCCTATAGG+CGG | - | tig0018661:132464-132483 | Msa1368920:intron | 60.0% | |
| GTCACTGGGTCTACCAGTGG+CGG | - | tig0018661:134636-134655 | Msa1368920:intron | 60.0% | |
| ! | GGTGATGGCCACCGTGAAGA+AGG | - | tig0018661:134768-134787 | Msa1368920:intron | 60.0% |
| TTCGGCGCCATGGTTTACGC+TGG | + | tig0018661:134840-134859 | None:intergenic | 60.0% | |
| ! | GCGTAAACCATGGCGCCGAA+AGG | - | tig0018661:134840-134859 | Msa1368920:intron | 60.0% |
| GGGCAGACCTGTGTGAGGCT+TGG | + | tig0018661:132457-132476 | None:intergenic | 65.0% | |
| CAATTCACCGTCGCCGCCAC+TGG | + | tig0018661:134652-134671 | None:intergenic | 65.0% | |
| ACACCGTCCTTTCGGCGCCA+TGG | + | tig0018661:134850-134869 | None:intergenic | 65.0% | |
| CTCAGGTCGCGGAGGATCCG+CGG | - | tig0018661:134597-134616 | Msa1368920:intron | 70.0% | |
| TCAGGTCGCGGAGGATCCGC+GGG | - | tig0018661:134598-134617 | Msa1368920:intron | 70.0% | |
| GGGTCTACCAGTGGCGGCGA+CGG | - | tig0018661:134642-134661 | Msa1368920:intron | 70.0% | |
| ! | CGCTGGCGAACGATGACGGC+AGG | + | tig0018661:134823-134842 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018661 | gene | 128550 | 135845 | 128550 | ID=Msa1368920;Name=Msa1368920 |
| tig0018661 | mRNA | 128550 | 135845 | 128550 | ID=Msa1368920-mRNA-1;Parent=Msa1368920;Name=Msa1368920-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.6|0.5|0.83|1|1|6|337|200 |
| tig0018661 | exon | 128550 | 128969 | 128550 | ID=Msa1368920-mRNA-1:exon:826;Parent=Msa1368920-mRNA-1 |
| tig0018661 | exon | 129354 | 129395 | 129354 | ID=Msa1368920-mRNA-1:exon:825;Parent=Msa1368920-mRNA-1 |
| tig0018661 | exon | 129509 | 129793 | 129509 | ID=Msa1368920-mRNA-1:exon:824;Parent=Msa1368920-mRNA-1 |
| tig0018661 | exon | 129890 | 129923 | 129890 | ID=Msa1368920-mRNA-1:exon:823;Parent=Msa1368920-mRNA-1 |
| tig0018661 | exon | 135156 | 135238 | 135156 | ID=Msa1368920-mRNA-1:exon:822;Parent=Msa1368920-mRNA-1 |
| tig0018661 | exon | 135770 | 135845 | 135770 | ID=Msa1368920-mRNA-1:exon:821;Parent=Msa1368920-mRNA-1 |
| tig0018661 | CDS | 135770 | 135845 | 135770 | ID=Msa1368920-mRNA-1:cds;Parent=Msa1368920-mRNA-1 |
| tig0018661 | CDS | 135156 | 135238 | 135156 | ID=Msa1368920-mRNA-1:cds;Parent=Msa1368920-mRNA-1 |
| tig0018661 | CDS | 129890 | 129923 | 129890 | ID=Msa1368920-mRNA-1:cds;Parent=Msa1368920-mRNA-1 |
| tig0018661 | CDS | 129509 | 129793 | 129509 | ID=Msa1368920-mRNA-1:cds;Parent=Msa1368920-mRNA-1 |
| tig0018661 | CDS | 129354 | 129395 | 129354 | ID=Msa1368920-mRNA-1:cds;Parent=Msa1368920-mRNA-1 |
| tig0018661 | CDS | 128887 | 128969 | 128887 | ID=Msa1368920-mRNA-1:cds;Parent=Msa1368920-mRNA-1 |
| tig0018661 | three_prime_UTR | 128550 | 128886 | 128550 | ID=Msa1368920-mRNA-1:three_prime_utr;Parent=Msa1368920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
