Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210360 | XP_013469779.1 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210360 | sp|Q8GTE3|RS3A_CICAR | 92.720 | 261 | 19 | 0 | 1 | 261 | 1 | 261 | 4.49e-175 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210360 | B7FLW8 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0210360 | 0.854335 | 1.318232e-61 | -8.615850e-47 |
| Msa0002790 | Msa0210360 | 0.867487 | 1.319496e-65 | -8.615850e-47 |
| Msa0022970 | Msa0210360 | 0.829507 | 4.951758e-55 | -8.615850e-47 |
| Msa0027590 | Msa0210360 | 0.823879 | 1.092157e-53 | -8.615850e-47 |
| Msa0032780 | Msa0210360 | 0.843278 | 1.545758e-58 | -8.615850e-47 |
| Msa0040220 | Msa0210360 | 0.842074 | 3.228159e-58 | -8.615850e-47 |
| Msa0042480 | Msa0210360 | 0.840957 | 6.357662e-58 | -8.615850e-47 |
| Msa0044890 | Msa0210360 | 0.809813 | 1.571801e-50 | -8.615850e-47 |
| Msa0045730 | Msa0210360 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
| Msa0068970 | Msa0210360 | 0.814178 | 1.758311e-51 | -8.615850e-47 |
| Msa0070840 | Msa0210360 | 0.812443 | 4.229008e-51 | -8.615850e-47 |
| Msa0074030 | Msa0210360 | 0.827360 | 1.633339e-54 | -8.615850e-47 |
| Msa0075350 | Msa0210360 | 0.844123 | 9.184459e-59 | -8.615850e-47 |
| Msa0079590 | Msa0210360 | 0.826315 | 2.902744e-54 | -8.615850e-47 |
| Msa0085780 | Msa0210360 | 0.831778 | 1.376295e-55 | -8.615850e-47 |
| Msa0087910 | Msa0210360 | 0.856290 | 3.556265e-62 | -8.615850e-47 |
| Msa0116130 | Msa0210360 | 0.826248 | 3.010917e-54 | -8.615850e-47 |
| Msa0116670 | Msa0210360 | 0.888784 | 4.343223e-73 | -8.615850e-47 |
| Msa0118710 | Msa0210360 | 0.801483 | 8.814232e-49 | -8.615850e-47 |
| Msa0133540 | Msa0210360 | 0.851884 | 6.634256e-61 | -8.615850e-47 |
| Msa0134580 | Msa0210360 | 0.801105 | 1.053248e-48 | -8.615850e-47 |
| Msa0138890 | Msa0210360 | 0.826595 | 2.488150e-54 | -8.615850e-47 |
| Msa0172900 | Msa0210360 | 0.812155 | 4.888801e-51 | -8.615850e-47 |
| Msa0172930 | Msa0210360 | 0.815924 | 7.204160e-52 | -8.615850e-47 |
| Msa0173530 | Msa0210360 | 0.888656 | 4.863279e-73 | -8.615850e-47 |
| Msa0181490 | Msa0210360 | 0.848926 | 4.489838e-60 | -8.615850e-47 |
| Msa0183090 | Msa0210360 | 0.802280 | 6.047266e-49 | -8.615850e-47 |
| Msa0186740 | Msa0210360 | 0.829357 | 5.384804e-55 | -8.615850e-47 |
| Msa0191450 | Msa0210360 | 0.830027 | 3.699284e-55 | -8.615850e-47 |
| Msa0191550 | Msa0210360 | 0.817296 | 3.550166e-52 | -8.615850e-47 |
| Msa0192750 | Msa0210360 | 0.832660 | 8.328852e-56 | -8.615850e-47 |
| Msa0194940 | Msa0210360 | 0.855436 | 6.318213e-62 | -8.615850e-47 |
| Msa0210330 | Msa0210360 | 0.880878 | 3.818937e-70 | -8.615850e-47 |
| Msa0210360 | Msa0218830 | 0.829973 | 3.813495e-55 | -8.615850e-47 |
| Msa0210360 | Msa0219120 | 0.820238 | 7.624062e-53 | -8.615850e-47 |
| Msa0210360 | Msa0221030 | 0.849094 | 4.030304e-60 | -8.615850e-47 |
| Msa0210360 | Msa0222730 | 0.887163 | 1.816595e-72 | -8.615850e-47 |
| Msa0210360 | Msa0229150 | 0.823002 | 1.750730e-53 | -8.615850e-47 |
| Msa0210360 | Msa0230490 | 0.829745 | 4.333691e-55 | -8.615850e-47 |
| Msa0210360 | Msa0235050 | 0.804953 | 1.686523e-49 | -8.615850e-47 |
| Msa0210360 | Msa0250820 | 0.836982 | 6.800163e-57 | -8.615850e-47 |
| Msa0210360 | Msa0250870 | 0.835062 | 2.088504e-56 | -8.615850e-47 |
| Msa0210360 | Msa0257450 | 0.849986 | 2.273105e-60 | -8.615850e-47 |
| Msa0210360 | Msa0258850 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
| Msa0210360 | Msa0264010 | 0.840290 | 9.508005e-58 | -8.615850e-47 |
| Msa0210360 | Msa0269180 | 0.815670 | 8.209355e-52 | -8.615850e-47 |
| Msa0210360 | Msa0289580 | 0.826598 | 2.484710e-54 | -8.615850e-47 |
| Msa0210360 | Msa0289610 | 0.832059 | 1.173168e-55 | -8.615850e-47 |
| Msa0210360 | Msa0296720 | 0.827735 | 1.327404e-54 | -8.615850e-47 |
| Msa0210360 | Msa0297830 | 0.886081 | 4.664090e-72 | -8.615850e-47 |
| Msa0210360 | Msa0298200 | 0.805389 | 1.367017e-49 | -8.615850e-47 |
| Msa0210360 | Msa0298870 | 0.806440 | 8.216414e-50 | -8.615850e-47 |
| Msa0210360 | Msa0301220 | 0.846044 | 2.780837e-59 | -8.615850e-47 |
| Msa0210360 | Msa0306690 | 0.839952 | 1.164579e-57 | -8.615850e-47 |
| Msa0210360 | Msa0312210 | 0.835803 | 1.356219e-56 | -8.615850e-47 |
| Msa0210360 | Msa0313520 | 0.811500 | 6.788505e-51 | -8.615850e-47 |
| Msa0210360 | Msa0327300 | 0.869328 | 3.363235e-66 | -8.615850e-47 |
| Msa0210360 | Msa0327330 | 0.825318 | 5.003294e-54 | -8.615850e-47 |
| Msa0210360 | Msa0335840 | 0.896420 | 3.754098e-76 | -8.615850e-47 |
| Msa0210360 | Msa0341880 | 0.808739 | 2.671163e-50 | -8.615850e-47 |
| Msa0210360 | Msa0342850 | 0.849091 | 4.040064e-60 | -8.615850e-47 |
| Msa0210360 | Msa0369410 | 0.857438 | 1.631892e-62 | -8.615850e-47 |
| Msa0210360 | Msa0376890 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0210360 | Msa0426090 | 0.831793 | 1.364529e-55 | -8.615850e-47 |
| Msa0210360 | Msa0426250 | 0.842761 | 2.123069e-58 | -8.615850e-47 |
| Msa0210360 | Msa0438960 | 0.809024 | 2.321434e-50 | -8.615850e-47 |
| Msa0210360 | Msa0463520 | 0.854540 | 1.149806e-61 | -8.615850e-47 |
| Msa0210360 | Msa0471880 | 0.861006 | 1.388661e-63 | -8.615850e-47 |
| Msa0210360 | Msa0472480 | 0.821124 | 4.769281e-53 | -8.615850e-47 |
| Msa0210360 | Msa0475810 | 0.846477 | 2.119088e-59 | -8.615850e-47 |
| Msa0210360 | Msa0481520 | 0.854830 | 9.477613e-62 | -8.615850e-47 |
| Msa0210360 | Msa0481850 | 0.873338 | 1.589155e-67 | -8.615850e-47 |
| Msa0210360 | Msa0483110 | 0.829346 | 5.419038e-55 | -8.615850e-47 |
| Msa0210360 | Msa0486070 | 0.812023 | 5.221713e-51 | -8.615850e-47 |
| Msa0210360 | Msa0529900 | 0.832633 | 8.455658e-56 | -8.615850e-47 |
| Msa0210360 | Msa0550420 | 0.836908 | 7.102326e-57 | -8.615850e-47 |
| Msa0210360 | Msa0573500 | 0.811137 | 8.137622e-51 | -8.615850e-47 |
| Msa0210360 | Msa0584030 | 0.864553 | 1.119379e-64 | -8.615850e-47 |
| Msa0210360 | Msa0617540 | 0.800183 | 1.623897e-48 | -8.615850e-47 |
| Msa0210360 | Msa0622750 | 0.822220 | 2.661440e-53 | -8.615850e-47 |
| Msa0210360 | Msa0653060 | 0.863597 | 2.222124e-64 | -8.615850e-47 |
| Msa0210360 | Msa0705800 | 0.878404 | 2.885497e-69 | -8.615850e-47 |
| Msa0210360 | Msa0712610 | 0.880146 | 6.977336e-70 | -8.615850e-47 |
| Msa0210360 | Msa0717380 | 0.827587 | 1.441105e-54 | -8.615850e-47 |
| Msa0210360 | Msa0729200 | 0.854826 | 9.501559e-62 | -8.615850e-47 |
| Msa0210360 | Msa0752910 | 0.843358 | 1.472215e-58 | -8.615850e-47 |
| Msa0210360 | Msa0769590 | 0.847006 | 1.518976e-59 | -8.615850e-47 |
| Msa0210360 | Msa0781080 | 0.849307 | 3.516534e-60 | -8.615850e-47 |
| Msa0210360 | Msa0781310 | 0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa0210360 | Msa0783630 | 0.846199 | 2.523574e-59 | -8.615850e-47 |
| Msa0210360 | Msa0785130 | 0.818388 | 2.012394e-52 | -8.615850e-47 |
| Msa0210360 | Msa0786660 | 0.819207 | 1.310705e-52 | -8.615850e-47 |
| Msa0210360 | Msa0788380 | 0.871045 | 9.211389e-67 | -8.615850e-47 |
| Msa0210360 | Msa0792420 | 0.826339 | 2.864908e-54 | -8.615850e-47 |
| Msa0210360 | Msa0799830 | 0.816417 | 5.591554e-52 | -8.615850e-47 |
| Msa0210360 | Msa0806880 | 0.825396 | 4.794873e-54 | -8.615850e-47 |
| Msa0210360 | Msa0817540 | 0.822662 | 2.100946e-53 | -8.615850e-47 |
| Msa0210360 | Msa0822580 | 0.808387 | 3.174890e-50 | -8.615850e-47 |
| Msa0210360 | Msa0848240 | 0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0210360 | Msa0861320 | 0.836267 | 1.034435e-56 | -8.615850e-47 |
| Msa0210360 | Msa0876170 | 0.838310 | 3.103383e-57 | -8.615850e-47 |
| Msa0210360 | Msa0888810 | 0.845468 | 3.984837e-59 | -8.615850e-47 |
| Msa0210360 | Msa0915540 | 0.855246 | 7.177366e-62 | -8.615850e-47 |
| Msa0210360 | Msa0945480 | 0.825155 | 5.469810e-54 | -8.615850e-47 |
| Msa0210360 | Msa1037290 | 0.892876 | 1.059475e-74 | -8.615850e-47 |
| Msa0210360 | Msa1040160 | 0.883854 | 3.152948e-71 | -8.615850e-47 |
| Msa0210360 | Msa1041680 | 0.852123 | 5.673241e-61 | -8.615850e-47 |
| Msa0210360 | Msa1042100 | 0.825138 | 5.518762e-54 | -8.615850e-47 |
| Msa0210360 | Msa1058700 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
| Msa0210360 | Msa1078870 | 0.886614 | 2.935161e-72 | -8.615850e-47 |
| Msa0210360 | Msa1078980 | 0.872791 | 2.423775e-67 | -8.615850e-47 |
| Msa0210360 | Msa1080350 | 0.880743 | 4.267496e-70 | -8.615850e-47 |
| Msa0210360 | Msa1082170 | 0.824869 | 6.389695e-54 | -8.615850e-47 |
| Msa0210360 | Msa1083370 | 0.877587 | 5.575509e-69 | -8.615850e-47 |
| Msa0210360 | Msa1088490 | 0.828243 | 1.001948e-54 | -8.615850e-47 |
| Msa0210360 | Msa1094380 | 0.830640 | 2.621438e-55 | -8.615850e-47 |
| Msa0210360 | Msa1096900 | 0.802299 | 5.991633e-49 | -8.615850e-47 |
| Msa0210360 | Msa1124850 | 0.853732 | 1.967548e-61 | -8.615850e-47 |
| Msa0210360 | Msa1125860 | 0.871797 | 5.195326e-67 | -8.615850e-47 |
| Msa0210360 | Msa1126060 | 0.872464 | 3.118268e-67 | -8.615850e-47 |
| Msa0210360 | Msa1126520 | 0.865329 | 6.391676e-65 | -8.615850e-47 |
| Msa0210360 | Msa1128120 | 0.834099 | 3.644749e-56 | -8.615850e-47 |
| Msa0210360 | Msa1164150 | 0.872328 | 3.461597e-67 | -8.615850e-47 |
| Msa0210360 | Msa1165640 | 0.800576 | 1.350629e-48 | -8.615850e-47 |
| Msa0210360 | Msa1166570 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
| Msa0210360 | Msa1167540 | 0.892209 | 1.959257e-74 | -8.615850e-47 |
| Msa0210360 | Msa1167550 | 0.864270 | 1.372435e-64 | -8.615850e-47 |
| Msa0210360 | Msa1169180 | 0.867792 | 1.053641e-65 | -8.615850e-47 |
| Msa0210360 | Msa1180000 | 0.808787 | 2.608973e-50 | -8.615850e-47 |
| Msa0210360 | Msa1186030 | 0.838728 | 2.420548e-57 | -8.615850e-47 |
| Msa0210360 | Msa1188260 | 0.837241 | 5.839218e-57 | -8.615850e-47 |
| Msa0210360 | Msa1203560 | 0.815788 | 7.726420e-52 | -8.615850e-47 |
| Msa0210360 | Msa1215820 | 0.859942 | 2.917262e-63 | -8.615850e-47 |
| Msa0210360 | Msa1218170 | 0.811102 | 8.282130e-51 | -8.615850e-47 |
| Msa0210360 | Msa1240270 | 0.854694 | 1.037839e-61 | -8.615850e-47 |
| Msa0210360 | Msa1256840 | 0.834370 | 3.117237e-56 | -8.615850e-47 |
| Msa0210360 | Msa1258540 | 0.811313 | 7.451616e-51 | -8.615850e-47 |
| Msa0210360 | Msa1270640 | 0.816723 | 4.774973e-52 | -8.615850e-47 |
| Msa0210360 | Msa1270710 | 0.806953 | 6.403602e-50 | -8.615850e-47 |
| Msa0210360 | Msa1295150 | 0.867354 | 1.455903e-65 | -8.615850e-47 |
| Msa0210360 | Msa1295170 | 0.854474 | 1.202093e-61 | -8.615850e-47 |
| Msa0210360 | Msa1305050 | 0.804464 | 2.133094e-49 | -8.615850e-47 |
| Msa0210360 | Msa1311400 | 0.908136 | 2.375457e-81 | -8.615850e-47 |
| Msa0210360 | Msa1321790 | 0.804817 | 1.800603e-49 | -8.615850e-47 |
| Msa0210360 | Msa1332250 | 0.896526 | 3.391559e-76 | -8.615850e-47 |
| Msa0210360 | Msa1338190 | 0.849774 | 2.604854e-60 | -8.615850e-47 |
| Msa0210360 | Msa1343260 | 0.814733 | 1.325820e-51 | -8.615850e-47 |
| Msa0210360 | Msa1349570 | 0.807206 | 5.660314e-50 | -8.615850e-47 |
| Msa0210360 | Msa1356790 | 0.880514 | 5.155743e-70 | -8.615850e-47 |
| Msa0210360 | Msa1362790 | 0.821252 | 4.457914e-53 | -8.615850e-47 |
| Msa0210360 | Msa1366180 | 0.814304 | 1.649019e-51 | -8.615850e-47 |
| Msa0210360 | Msa1368920 | 0.891150 | 5.163897e-74 | -8.615850e-47 |
| Msa0210360 | Msa1369190 | 0.804838 | 1.782154e-49 | -8.615850e-47 |
| Msa0210360 | Msa1374240 | 0.851788 | 7.062250e-61 | -8.615850e-47 |
| Msa0210360 | Msa1387410 | 0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0210360 | Msa1392590 | 0.896634 | 3.056282e-76 | -8.615850e-47 |
| Msa0210360 | Msa1397100 | 0.863664 | 2.118592e-64 | -8.615850e-47 |
| Msa0210360 | Msa1403910 | 0.871627 | 5.915501e-67 | -8.615850e-47 |
| Msa0210360 | Msa1413500 | 0.824782 | 6.698473e-54 | -8.615850e-47 |
| Msa0210360 | Msa1418770 | 0.852408 | 4.708006e-61 | -8.615850e-47 |
| Msa0210360 | Msa1426120 | 0.896056 | 5.319717e-76 | -8.615850e-47 |
| Msa0210360 | Msa1426370 | 0.848485 | 5.948977e-60 | -8.615850e-47 |
| Msa0210360 | Msa1426490 | 0.886790 | 2.516752e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210360 | MtrunA17_Chr1g0204941 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
| Msa0210360 | MtrunA17_Chr3g0081171 | 95.402 | 261 | 12 | 0 | 1 | 261 | 1 | 261 | 2.86e-180 | 495 |
| Msa0210360 | MtrunA17_Chr5g0394611 | 94.636 | 261 | 14 | 0 | 1 | 261 | 1 | 261 | 7.67e-179 | 492 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210360 | AT3G04840.1 | 85.115 | 262 | 38 | 1 | 1 | 261 | 1 | 262 | 1.75e-163 | 453 |
| Msa0210360 | AT4G34670.1 | 85.496 | 262 | 37 | 1 | 1 | 261 | 1 | 262 | 4.54e-163 | 452 |
Find 88 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAAACTTGGGAGCTTTA+AGG | 0.168578 | 2_1:-50458516 | None:intergenic |
| AATATCATACCAATCCTTCT+TGG | 0.295389 | 2_1:-50456534 | None:intergenic |
| ATTTGGTCCTTGTAGGTTCA+TGG | 0.297913 | 2_1:+50458944 | Msa0210360:intron |
| CATATTAGTTTGTTCAAATT+CGG | 0.307811 | 2_1:+50459313 | Msa0210360:three_prime_UTR |
| GAAGGATTGGTATGATATTA+AGG | 0.312711 | 2_1:+50456538 | Msa0210360:CDS |
| GTTTCTCACCCCAAGTCTTT+TGG | 0.335249 | 2_1:+50459223 | Msa0210360:intron |
| CTGACTAGATTGTGCATAAC+AGG | 0.339955 | 2_1:-50458100 | None:intergenic |
| AAAGCTCCCAAGTTTGATCT+TGG | 0.357514 | 2_1:+50458520 | Msa0210360:CDS |
| TAAGAACAAGCGGATCTCTA+AGG | 0.365175 | 2_1:+50456381 | Msa0210360:CDS |
| GTTTGATCTTGGAAAATTGA+TGG | 0.369245 | 2_1:+50458531 | Msa0210360:CDS |
| GAAATTGTTGGAGCTTGATT+TGG | 0.369823 | 2_1:+50459037 | Msa0210360:exon |
| AAATTCATTCCCGAGATGAT+TGG | 0.381702 | 2_1:+50458424 | Msa0210360:CDS |
| GGGACGAAGACCATGCATTC+AGG | 0.393353 | 2_1:+50457777 | Msa0210360:CDS |
| ATCCTGTGATTTGAAGGAAT+TGG | 0.402781 | 2_1:+50458396 | Msa0210360:CDS |
| GACCCTCGTGTCTCGTACTC+AGG | 0.406163 | 2_1:+50456595 | Msa0210360:CDS |
| TACCAATCCTTCTTGGCAAA+TGG | 0.412105 | 2_1:-50456527 | None:intergenic |
| TAGAGTGTTTGAGGTTTCAT+TGG | 0.413434 | 2_1:+50457742 | Msa0210360:CDS |
| GTTTCATTGGCTGATCTTCA+AGG | 0.434675 | 2_1:+50457755 | Msa0210360:CDS |
| TGCTGATCCATTTGCCAAGA+AGG | 0.436339 | 2_1:+50456520 | Msa0210360:CDS |
| AATTCATTCCCGAGATGATT+GGG | 0.437177 | 2_1:+50458425 | Msa0210360:CDS |
| AGCATCATCCTGTGATTTGA+AGG | 0.439297 | 2_1:+50458390 | Msa0210360:CDS |
| TACCAAGAGGAGAGCTAACC+AGG | 0.440122 | 2_1:+50458068 | Msa0210360:CDS |
| TCCGTCACCATTTCATCAGC+AGG | 0.444686 | 2_1:-50459004 | None:intergenic |
| GCTCAAGCATAGAGTGTTTG+AGG | 0.460444 | 2_1:+50457733 | Msa0210360:CDS |
| ACCATGCATTCAGGAAGATT+AGG | 0.462005 | 2_1:+50457786 | Msa0210360:CDS |
| ATCCATTTGCCAAGAAGGAT+TGG | 0.465718 | 2_1:+50456525 | Msa0210360:CDS |
| ATCTCCTTCCCAATCATCTC+GGG | 0.483111 | 2_1:-50458433 | None:intergenic |
| GAGGAACCTACTGAAATTGT+TGG | 0.484047 | 2_1:+50459025 | Msa0210360:CDS |
| TGTTCAGATCCGTAGGAAGA+TGG | 0.490433 | 2_1:+50458348 | Msa0210360:intron |
| CACCTGGTTAGCTCTCCTCT+TGG | 0.502596 | 2_1:-50458070 | None:intergenic |
| AACTGACAAACTGAGGTCAT+TGG | 0.506332 | 2_1:+50457960 | Msa0210360:CDS |
| TGAGGTCATTGGTGCGTAAG+TGG | 0.507827 | 2_1:+50457971 | Msa0210360:CDS |
| CGGATCTCTAAGGGGAAGAA+AGG | 0.516719 | 2_1:+50456391 | Msa0210360:CDS |
| AAGAACAAGCGGATCTCTAA+GGG | 0.521243 | 2_1:+50456382 | Msa0210360:CDS |
| CTTGTTCTTACCAACGGCCA+TGG | 0.523346 | 2_1:-50456368 | None:intergenic |
| ACCTAATCTTCCTGAATGCA+TGG | 0.523822 | 2_1:-50457787 | None:intergenic |
| TTTCATTGGCTGATCTTCAA+GGG | 0.523908 | 2_1:+50457756 | Msa0210360:CDS |
| TCATCTCGGGAATGAATTTG+CGG | 0.528925 | 2_1:-50458420 | None:intergenic |
| GGTATCATAAAACCCTAAAA+CGG | 0.529634 | 2_1:+50456296 | None:intergenic |
| GAATGACAGATTGCTTCAGA+TGG | 0.529723 | 2_1:+50457710 | Msa0210360:intron |
| AGAGAGGCCTGCTGATGAAA+TGG | 0.532099 | 2_1:+50458997 | Msa0210360:CDS |
| TCTTGCCGACATTCTTCACC+TGG | 0.534041 | 2_1:-50456574 | None:intergenic |
| AATCTCCTTCCCAATCATCT+CGG | 0.535678 | 2_1:-50458434 | None:intergenic |
| TTGAGAGCTGAAGATGTTCA+AGG | 0.537527 | 2_1:+50457809 | Msa0210360:CDS |
| CGGATGAACACATTCTGCAA+GGG | 0.539130 | 2_1:-50458481 | None:intergenic |
| TCAAATCACAGGATGATGCT+TGG | 0.544201 | 2_1:-50458387 | None:intergenic |
| CATAACAGGTCCTCTTCACC+TGG | 0.545447 | 2_1:-50458086 | None:intergenic |
| GGAGAGCTAACCAGGTGAAG+AGG | 0.557404 | 2_1:+50458076 | Msa0210360:CDS |
| CTCTGAGGATGTTGGCACAA+AGG | 0.562498 | 2_1:+50458973 | Msa0210360:CDS |
| AATGACAGATTGCTTCAGAT+GGG | 0.563670 | 2_1:+50457711 | Msa0210360:intron |
| CTTTATTTGTTCAGATCCGT+AGG | 0.563835 | 2_1:+50458341 | Msa0210360:intron |
| GTTTCACTGTTTGCAGAGTG+CGG | 0.564928 | 2_1:-50456346 | None:intergenic |
| GATCCGCTTGTTCTTACCAA+CGG | 0.569816 | 2_1:-50456374 | None:intergenic |
| GACCAATTCCTTCAAATCAC+AGG | 0.574407 | 2_1:-50458398 | None:intergenic |
| TCGGATGAACACATTCTGCA+AGG | 0.575354 | 2_1:-50458482 | None:intergenic |
| ACAATCTAGTCAGATTAGAC+AGG | 0.580594 | 2_1:+50458110 | Msa0210360:CDS |
| CAAGCTCCAACAATTTCAGT+AGG | 0.582102 | 2_1:-50459031 | None:intergenic |
| GGAGATTACTCTGAGGATGT+TGG | 0.587473 | 2_1:+50458965 | Msa0210360:CDS |
| TTCTTCACCTGGAAAACTGA+AGG | 0.588083 | 2_1:-50456563 | None:intergenic |
| TGATCTCAACCATCTTCCTA+CGG | 0.590794 | 2_1:-50458357 | None:intergenic |
| TTCATTGGCTGATCTTCAAG+GGG | 0.595752 | 2_1:+50457757 | Msa0210360:CDS |
| CAGTAGTCTTGACATCCACA+TGG | 0.596992 | 2_1:-50458011 | None:intergenic |
| AACAGTGAAACCATGGCCGT+TGG | 0.599680 | 2_1:+50456358 | Msa0210360:exon |
| CATTCCCGAGATGATTGGGA+AGG | 0.605231 | 2_1:+50458429 | Msa0210360:CDS |
| TGATCTTGGAAAATTGATGG+AGG | 0.612140 | 2_1:+50458534 | Msa0210360:CDS |
| TGAGAGCTGAAGATGTTCAA+GGG | 0.612312 | 2_1:+50457810 | Msa0210360:CDS |
| ACCCTCGTGTCTCGTACTCA+GGG | 0.615233 | 2_1:+50456596 | Msa0210360:CDS |
| CTCTGCAAACAGTGAAACCA+TGG | 0.618251 | 2_1:+50456351 | Msa0210360:exon |
| ATCTCTAAGGGGAAGAAAGG+TGG | 0.621403 | 2_1:+50456394 | Msa0210360:CDS |
| AACTCTTGTTGAAGCCCATG+TGG | 0.622205 | 2_1:+50457996 | Msa0210360:CDS |
| GTCTCGTACTCAGGGTACCA+AGG | 0.623684 | 2_1:+50456604 | Msa0210360:CDS |
| TGGCCGTTGGTAAGAACAAG+CGG | 0.624911 | 2_1:+50456371 | Msa0210360:CDS |
| CAGAGTTCTCACAGCAACAA+TGG | 0.627817 | 2_1:-50456321 | None:intergenic |
| GCCTGCTGATGAAATGGTGA+CGG | 0.629382 | 2_1:+50459003 | Msa0210360:CDS |
| GGATGAACACATTCTGCAAG+GGG | 0.631103 | 2_1:-50458480 | None:intergenic |
| CAAGGGGTAAATACTAGACG+TGG | 0.633754 | 2_1:-50458464 | None:intergenic |
| CTACTGATAATTACACATTG+AGG | 0.636083 | 2_1:+50458028 | Msa0210360:CDS |
| TTTGCATTGGCTTTACCAAG+AGG | 0.642280 | 2_1:+50458055 | Msa0210360:CDS |
| TACCCTGAGTACGAGACACG+AGG | 0.648373 | 2_1:-50456598 | None:intergenic |
| ATGTTGGCACAAAGGTAGAG+AGG | 0.654238 | 2_1:+50458981 | Msa0210360:CDS |
| CTGAAAATCAGATATGCATG+TGG | 0.659926 | 2_1:+50459158 | Msa0210360:three_prime_UTR |
| TCATGCAAAGAACATGCATG+AGG | 0.680360 | 2_1:-50459283 | None:intergenic |
| ATTTCACAACTGACAAACTG+AGG | 0.681977 | 2_1:+50457953 | Msa0210360:CDS |
| TGCTGATGAAATGGTGACGG+AGG | 0.686062 | 2_1:+50459006 | Msa0210360:CDS |
| ACCCTGAGTACGAGACACGA+GGG | 0.700568 | 2_1:-50456597 | None:intergenic |
| AGTAGTCTTGACATCCACAT+GGG | 0.706350 | 2_1:-50458010 | None:intergenic |
| AGAACAAGCGGATCTCTAAG+GGG | 0.721950 | 2_1:+50456383 | Msa0210360:CDS |
| GGTTCATGGAGATTACTCTG+AGG | 0.741731 | 2_1:+50458958 | Msa0210360:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTATAAAAATTGTTTTA+TGG | - | chr2_1:50457176-50457195 | None:intergenic | 10.0% |
| !!! | TTTGATTTTTTTTTATTTAC+AGG | + | chr2_1:50457924-50457943 | Msa0210360:intron | 10.0% |
| !!! | TTGATTTTTTTTTATTTACA+GGG | + | chr2_1:50457925-50457944 | Msa0210360:intron | 10.0% |
| !! | GATATTATGAAAATAAATAT+TGG | - | chr2_1:50458603-50458622 | None:intergenic | 10.0% |
| !! | GTAAAAAATGAAAATTTGAA+TGG | - | chr2_1:50456457-50456476 | None:intergenic | 15.0% |
| !!! | GTTTTTTGTTTTTTGTAATT+TGG | + | chr2_1:50456646-50456665 | Msa0210360:intron | 15.0% |
| !!! | TGATTTTTTTTTATTTACAG+GGG | + | chr2_1:50457926-50457945 | Msa0210360:intron | 15.0% |
| !!! | ATATATATCTGAATTTTGTT+TGG | + | chr2_1:50459131-50459150 | Msa0210360:three_prime_UTR | 15.0% |
| !!! | TTTGAATGGATTTTGAAAAA+GGG | - | chr2_1:50456443-50456462 | None:intergenic | 20.0% |
| !!! | ATTTGAATGGATTTTGAAAA+AGG | - | chr2_1:50456444-50456463 | None:intergenic | 20.0% |
| !! | ATATTCAATGAAAGTAAGAT+AGG | - | chr2_1:50456715-50456734 | None:intergenic | 20.0% |
| !! | AAAAAAATGTTGTCAAATAG+CGG | - | chr2_1:50457138-50457157 | None:intergenic | 20.0% |
| !!! | TCTTGTCTTTTAAATAATGT+TGG | - | chr2_1:50457378-50457397 | None:intergenic | 20.0% |
| !! | CTTAATGCTTATTTAGAAAA+TGG | + | chr2_1:50457680-50457699 | Msa0210360:intron | 20.0% |
| !!! | AAAATCTTTTGACAAATTTC+TGG | + | chr2_1:50457834-50457853 | Msa0210360:CDS | 20.0% |
| !!! | AAATCTTTTGACAAATTTCT+GGG | + | chr2_1:50457835-50457854 | Msa0210360:CDS | 20.0% |
| !! | ATATATAAAGAAGAAATCAC+TGG | + | chr2_1:50458253-50458272 | Msa0210360:intron | 20.0% |
| !!! | CATATTAGTTTGTTCAAATT+CGG | + | chr2_1:50459313-50459332 | Msa0210360:three_prime_UTR | 20.0% |
| !!! | ATTCTTATTTTGCAATTTGA+CGG | - | chr2_1:50459359-50459378 | None:intergenic | 20.0% |
| !! | TTTCCTTGCATTTTCTATAA+TGG | + | chr2_1:50456480-50456499 | Msa0210360:intron | 25.0% |
| ! | AAACCATTATAGAAAATGCA+AGG | - | chr2_1:50456486-50456505 | None:intergenic | 25.0% |
| ! | AAAAACAAAAAACATGACAG+AGG | - | chr2_1:50456639-50456658 | None:intergenic | 25.0% |
| ! | ACTTTCATTGAATATCTATC+TGG | + | chr2_1:50456720-50456739 | Msa0210360:intron | 25.0% |
| ! | TTAAGCTATCTAAACAATCA+GGG | - | chr2_1:50456751-50456770 | None:intergenic | 25.0% |
| ! | ATTAAGCTATCTAAACAATC+AGG | - | chr2_1:50456752-50456771 | None:intergenic | 25.0% |
| !! | AAGCTAAAAGTTTTTCCTAT+AGG | + | chr2_1:50456854-50456873 | Msa0210360:intron | 25.0% |
| ! | TTATTTCCATAATAGCCTAT+AGG | - | chr2_1:50456872-50456891 | None:intergenic | 25.0% |
| ! | GTTACTTATGTTCGTATATA+CGG | + | chr2_1:50456953-50456972 | Msa0210360:intron | 25.0% |
| ! | AAAAAATGTTGTCAAATAGC+GGG | - | chr2_1:50457137-50457156 | None:intergenic | 25.0% |
| !! | TTATACTAAAAAGCATATCG+TGG | + | chr2_1:50457187-50457206 | Msa0210360:intron | 25.0% |
| !!! | TGATTGTTGTTTTATAAGTG+TGG | - | chr2_1:50457306-50457325 | None:intergenic | 25.0% |
| ! | GAGAATAAAAATGAAGACAT+GGG | - | chr2_1:50457481-50457500 | None:intergenic | 25.0% |
| !! | AAATATGTCTTAGTCTTTCA+TGG | + | chr2_1:50457622-50457641 | Msa0210360:intron | 25.0% |
| !! | AATATGTCTTAGTCTTTCAT+GGG | + | chr2_1:50457623-50457642 | Msa0210360:intron | 25.0% |
| ! | ATTATGACAAATAGATGGTT+CGG | - | chr2_1:50457873-50457892 | None:intergenic | 25.0% |
| ! | ACAACATTATGACAAATAGA+TGG | - | chr2_1:50457878-50457897 | None:intergenic | 25.0% |
| !! | TTTGTCATAATGTTGTTTGT+TGG | + | chr2_1:50457882-50457901 | Msa0210360:intron | 25.0% |
| ! | ATATATTAGTGTATCCAACA+CGG | + | chr2_1:50458182-50458201 | Msa0210360:intron | 25.0% |
| !! | AATTTTCCAAGATCAAACTT+GGG | - | chr2_1:50458529-50458548 | None:intergenic | 25.0% |
| ! | TATCACCTGAATAAAAACTT+TGG | + | chr2_1:50458619-50458638 | Msa0210360:intron | 25.0% |
| !! | AACAACCAAAGTTTTTATTC+AGG | - | chr2_1:50458627-50458646 | None:intergenic | 25.0% |
| !! | AAAAACTTTGGTTGTTACTT+TGG | + | chr2_1:50458631-50458650 | Msa0210360:intron | 25.0% |
| !! | TTTGGAAAGTTTGAAGTAAT+TGG | - | chr2_1:50458700-50458719 | None:intergenic | 25.0% |
| ! | AATAATCTGAAGGTTGTTTA+TGG | - | chr2_1:50458742-50458761 | None:intergenic | 25.0% |
| ! | TTGAACTTGTAATAATCTGA+AGG | - | chr2_1:50458752-50458771 | None:intergenic | 25.0% |
| ! | ACTTATAACCATCTAAAAAG+TGG | + | chr2_1:50458900-50458919 | Msa0210360:intron | 25.0% |
| !!! | GGTTTGATTTTGTTTCTATT+TGG | + | chr2_1:50458927-50458946 | Msa0210360:intron | 25.0% |
| !!! | GTATATTTTTCAGCAATGAA+TGG | - | chr2_1:50459257-50459276 | None:intergenic | 25.0% |
| !! | AATGGATTTTGAAAAAGGGT+TGG | - | chr2_1:50456439-50456458 | None:intergenic | 30.0% |
| AATATCATACCAATCCTTCT+TGG | - | chr2_1:50456537-50456556 | None:intergenic | 30.0% | |
| ! | GAAGGATTGGTATGATATTA+AGG | + | chr2_1:50456538-50456557 | Msa0210360:CDS | 30.0% |
| !! | GGTTTGATTTGTACATTGTT+AGG | + | chr2_1:50456667-50456686 | Msa0210360:intron | 30.0% |
| ! | GTTTTTCCTATAGGCTATTA+TGG | + | chr2_1:50456863-50456882 | Msa0210360:intron | 30.0% |
| TAAGCTGAAAAAACATCTCA+TGG | + | chr2_1:50456889-50456908 | Msa0210360:intron | 30.0% | |
| GAACATAAGTAACTAAGTGA+CGG | - | chr2_1:50456946-50456965 | None:intergenic | 30.0% | |
| CGAGAATAAAAATGAAGACA+TGG | - | chr2_1:50457482-50457501 | None:intergenic | 30.0% | |
| ! | ATATGTCTTAGTCTTTCATG+GGG | + | chr2_1:50457624-50457643 | Msa0210360:intron | 30.0% |
| GTTGCTGAAATTTGATCAAT+TGG | + | chr2_1:50457646-50457665 | Msa0210360:intron | 30.0% | |
| CTACTGATAATTACACATTG+AGG | + | chr2_1:50458028-50458047 | Msa0210360:CDS | 30.0% | |
| !! | CTTTAAGGATCTTCACTTTT+CGG | - | chr2_1:50458504-50458523 | None:intergenic | 30.0% |
| ! | CAATTTTCCAAGATCAAACT+TGG | - | chr2_1:50458530-50458549 | None:intergenic | 30.0% |
| GTTTGATCTTGGAAAATTGA+TGG | + | chr2_1:50458531-50458550 | Msa0210360:CDS | 30.0% | |
| ! | GTTTTCACACAAGCATTTAT+TGG | - | chr2_1:50458793-50458812 | None:intergenic | 30.0% |
| TCAAATATGCCAATCCAAAC+AGG | + | chr2_1:50456976-50456995 | Msa0210360:intron | 35.0% | |
| GTAGATCACATATCGCTATA+GGG | - | chr2_1:50457242-50457261 | None:intergenic | 35.0% | |
| AGATAGATATTTCGAGCAGA+GGG | - | chr2_1:50457264-50457283 | None:intergenic | 35.0% | |
| TAGATAGATATTTCGAGCAG+AGG | - | chr2_1:50457265-50457284 | None:intergenic | 35.0% | |
| TCGAAATATCTATCTAGCAC+TGG | + | chr2_1:50457269-50457288 | Msa0210360:intron | 35.0% | |
| CGAAATATCTATCTAGCACT+GGG | + | chr2_1:50457270-50457289 | Msa0210360:intron | 35.0% | |
| !! | AATAATGTTGGTCTTGCTTG+TGG | - | chr2_1:50457366-50457385 | None:intergenic | 35.0% |
| GACAAGAAAAAAGACTGAAC+TGG | + | chr2_1:50457391-50457410 | Msa0210360:intron | 35.0% | |
| TGAACTGGCATTATCATGAT+GGG | + | chr2_1:50457406-50457425 | Msa0210360:intron | 35.0% | |
| !!! | TTTTCTAAAGTATCGACTCC+AGG | + | chr2_1:50457443-50457462 | Msa0210360:intron | 35.0% |
| !! | TTTCTAAAGTATCGACTCCA+GGG | + | chr2_1:50457444-50457463 | Msa0210360:intron | 35.0% |
| ATTCTCATGTAAGTGGAAAG+AGG | - | chr2_1:50457521-50457540 | None:intergenic | 35.0% | |
| TCTTTCCACTTACATGAGAA+TGG | + | chr2_1:50457520-50457539 | Msa0210360:intron | 35.0% | |
| AACTTCCATTCTCATGTAAG+TGG | - | chr2_1:50457528-50457547 | None:intergenic | 35.0% | |
| !!! | GCTATTTAACCCATTGGTTT+TGG | + | chr2_1:50457585-50457604 | Msa0210360:intron | 35.0% |
| TCCTTGTAACCAAAACCAAT+GGG | - | chr2_1:50457597-50457616 | None:intergenic | 35.0% | |
| TTCCTTGTAACCAAAACCAA+TGG | - | chr2_1:50457598-50457617 | None:intergenic | 35.0% | |
| AATGACAGATTGCTTCAGAT+GGG | + | chr2_1:50457711-50457730 | Msa0210360:intron | 35.0% | |
| ! | TAGAGTGTTTGAGGTTTCAT+TGG | + | chr2_1:50457742-50457761 | Msa0210360:CDS | 35.0% |
| ! | TTTCATTGGCTGATCTTCAA+GGG | + | chr2_1:50457756-50457775 | Msa0210360:CDS | 35.0% |
| ATTTCACAACTGACAAACTG+AGG | + | chr2_1:50457953-50457972 | Msa0210360:CDS | 35.0% | |
| ! | ACATTGAGGATGTTTTGCAT+TGG | + | chr2_1:50458042-50458061 | Msa0210360:CDS | 35.0% |
| ACAATCTAGTCAGATTAGAC+AGG | + | chr2_1:50458110-50458129 | Msa0210360:CDS | 35.0% | |
| !! | ATCCAACACATGTTTTAGGT+AGG | + | chr2_1:50458206-50458225 | Msa0210360:intron | 35.0% |
| ATCCTACCTAAAACATGTGT+TGG | - | chr2_1:50458211-50458230 | None:intergenic | 35.0% | |
| !!! | AAATCACTGGTTTTGAACCT+AGG | + | chr2_1:50458266-50458285 | Msa0210360:intron | 35.0% |
| CTACGGATCTGAACAAATAA+AGG | - | chr2_1:50458343-50458362 | None:intergenic | 35.0% | |
| ! | CTTTATTTGTTCAGATCCGT+AGG | + | chr2_1:50458341-50458360 | Msa0210360:intron | 35.0% |
| ATCCTGTGATTTGAAGGAAT+TGG | + | chr2_1:50458396-50458415 | Msa0210360:CDS | 35.0% | |
| AAATTCATTCCCGAGATGAT+TGG | + | chr2_1:50458424-50458443 | Msa0210360:CDS | 35.0% | |
| AATTCATTCCCGAGATGATT+GGG | + | chr2_1:50458425-50458444 | Msa0210360:CDS | 35.0% | |
| TGATCTTGGAAAATTGATGG+AGG | + | chr2_1:50458534-50458553 | Msa0210360:CDS | 35.0% | |
| CTTTCCAAAAGCTCTCTATT+CGG | + | chr2_1:50458711-50458730 | Msa0210360:intron | 35.0% | |
| TCATGCTAAAAGAGAACAGA+AGG | - | chr2_1:50458857-50458876 | None:intergenic | 35.0% | |
| AACCATCTAAAAAGTGGCTT+TGG | + | chr2_1:50458906-50458925 | Msa0210360:intron | 35.0% | |
| !!! | AACCAAAGCCACTTTTTAGA+TGG | - | chr2_1:50458911-50458930 | None:intergenic | 35.0% |
| ! | TGTTTCTATTTGGTCCTTGT+AGG | + | chr2_1:50458937-50458956 | Msa0210360:intron | 35.0% |
| GAAATTGTTGGAGCTTGATT+TGG | + | chr2_1:50459037-50459056 | Msa0210360:exon | 35.0% | |
| CTGAAAATCAGATATGCATG+TGG | + | chr2_1:50459158-50459177 | Msa0210360:three_prime_UTR | 35.0% | |
| TAAGAACAAGCGGATCTCTA+AGG | + | chr2_1:50456381-50456400 | Msa0210360:CDS | 40.0% | |
| AAGAACAAGCGGATCTCTAA+GGG | + | chr2_1:50456382-50456401 | Msa0210360:CDS | 40.0% | |
| ATCCATTTGCCAAGAAGGAT+TGG | + | chr2_1:50456525-50456544 | Msa0210360:CDS | 40.0% | |
| TACCAATCCTTCTTGGCAAA+TGG | - | chr2_1:50456530-50456549 | None:intergenic | 40.0% | |
| TTCTTCACCTGGAAAACTGA+AGG | - | chr2_1:50456566-50456585 | None:intergenic | 40.0% | |
| ! | GTTTTCCAGGTGAAGAATGT+CGG | + | chr2_1:50456569-50456588 | Msa0210360:CDS | 40.0% |
| GACAGAGGAAAACAATACCT+TGG | - | chr2_1:50456624-50456643 | None:intergenic | 40.0% | |
| GCTATCTAAACAATCAGGGA+GGG | - | chr2_1:50456747-50456766 | None:intergenic | 40.0% | |
| AGCTATCTAAACAATCAGGG+AGG | - | chr2_1:50456748-50456767 | None:intergenic | 40.0% | |
| CACTAAGTATACTCAGTCCA+AGG | - | chr2_1:50457006-50457025 | None:intergenic | 40.0% | |
| TCTTGTAGTGCAGAAAACAG+CGG | + | chr2_1:50457067-50457086 | Msa0210360:intron | 40.0% | |
| TCTGCTACACAATAGTGCTA+TGG | + | chr2_1:50457101-50457120 | Msa0210360:intron | 40.0% | |
| !! | TTGTCAAATAGCGGGTAAAG+TGG | - | chr2_1:50457129-50457148 | None:intergenic | 40.0% |
| GGTAGATCACATATCGCTAT+AGG | - | chr2_1:50457243-50457262 | None:intergenic | 40.0% | |
| CTGAACTGGCATTATCATGA+TGG | + | chr2_1:50457405-50457424 | Msa0210360:intron | 40.0% | |
| !! | TTCTAAAGTATCGACTCCAG+GGG | + | chr2_1:50457445-50457464 | Msa0210360:intron | 40.0% |
| !! | CAATGGGTTAAATAGCAGCT+AGG | - | chr2_1:50457581-50457600 | None:intergenic | 40.0% |
| ! | CTAGCTGCTATTTAACCCAT+TGG | + | chr2_1:50457579-50457598 | Msa0210360:intron | 40.0% |
| !!! | ACCCATTGGTTTTGGTTACA+AGG | + | chr2_1:50457593-50457612 | Msa0210360:intron | 40.0% |
| GAATGACAGATTGCTTCAGA+TGG | + | chr2_1:50457710-50457729 | Msa0210360:intron | 40.0% | |
| ! | GTTTCATTGGCTGATCTTCA+AGG | + | chr2_1:50457755-50457774 | Msa0210360:CDS | 40.0% |
| ! | TTCATTGGCTGATCTTCAAG+GGG | + | chr2_1:50457757-50457776 | Msa0210360:CDS | 40.0% |
| ACCATGCATTCAGGAAGATT+AGG | + | chr2_1:50457786-50457805 | Msa0210360:CDS | 40.0% | |
| ACCTAATCTTCCTGAATGCA+TGG | - | chr2_1:50457790-50457809 | None:intergenic | 40.0% | |
| TTGAGAGCTGAAGATGTTCA+AGG | + | chr2_1:50457809-50457828 | Msa0210360:CDS | 40.0% | |
| TGAGAGCTGAAGATGTTCAA+GGG | + | chr2_1:50457810-50457829 | Msa0210360:CDS | 40.0% | |
| AACTGACAAACTGAGGTCAT+TGG | + | chr2_1:50457960-50457979 | Msa0210360:CDS | 40.0% | |
| ! | AGTAGTCTTGACATCCACAT+GGG | - | chr2_1:50458013-50458032 | None:intergenic | 40.0% |
| !! | TTTGCATTGGCTTTACCAAG+AGG | + | chr2_1:50458055-50458074 | Msa0210360:CDS | 40.0% |
| CTGACTAGATTGTGCATAAC+AGG | - | chr2_1:50458103-50458122 | None:intergenic | 40.0% | |
| ! | CGGTATCCAACACATGTTTT+AGG | + | chr2_1:50458202-50458221 | Msa0210360:intron | 40.0% |
| AGAAGACAAAGCATGATCCT+AGG | - | chr2_1:50458286-50458305 | None:intergenic | 40.0% | |
| TGATCTCAACCATCTTCCTA+CGG | - | chr2_1:50458360-50458379 | None:intergenic | 40.0% | |
| TCAAATCACAGGATGATGCT+TGG | - | chr2_1:50458390-50458409 | None:intergenic | 40.0% | |
| AGCATCATCCTGTGATTTGA+AGG | + | chr2_1:50458390-50458409 | Msa0210360:CDS | 40.0% | |
| GACCAATTCCTTCAAATCAC+AGG | - | chr2_1:50458401-50458420 | None:intergenic | 40.0% | |
| TCATCTCGGGAATGAATTTG+CGG | - | chr2_1:50458423-50458442 | None:intergenic | 40.0% | |
| AATCTCCTTCCCAATCATCT+CGG | - | chr2_1:50458437-50458456 | None:intergenic | 40.0% | |
| GATCAAACTTGGGAGCTTTA+AGG | - | chr2_1:50458519-50458538 | None:intergenic | 40.0% | |
| AAAGCTCCCAAGTTTGATCT+TGG | + | chr2_1:50458520-50458539 | Msa0210360:CDS | 40.0% | |
| !! | TTGGTTGTTACTTTGGTCAC+TGG | + | chr2_1:50458638-50458657 | Msa0210360:intron | 40.0% |
| ! | GAAACCGAATAGAGAGCTTT+TGG | - | chr2_1:50458718-50458737 | None:intergenic | 40.0% |
| ATTTGGTCCTTGTAGGTTCA+TGG | + | chr2_1:50458944-50458963 | Msa0210360:intron | 40.0% | |
| GTAATCTCCATGAACCTACA+AGG | - | chr2_1:50458954-50458973 | None:intergenic | 40.0% | |
| GAGGAACCTACTGAAATTGT+TGG | + | chr2_1:50459025-50459044 | Msa0210360:CDS | 40.0% | |
| CAAGCTCCAACAATTTCAGT+AGG | - | chr2_1:50459034-50459053 | None:intergenic | 40.0% | |
| ACGCAAAACCAAAAGACTTG+GGG | - | chr2_1:50459234-50459253 | None:intergenic | 40.0% | |
| GACGCAAAACCAAAAGACTT+GGG | - | chr2_1:50459235-50459254 | None:intergenic | 40.0% | |
| TCATGCAAAGAACATGCATG+AGG | - | chr2_1:50459286-50459305 | None:intergenic | 40.0% | |
| ! | GCAACAATGGCACCGTTTTA+GGG | - | chr2_1:50456311-50456330 | None:intergenic | 45.0% |
| ! | AGCAACAATGGCACCGTTTT+AGG | - | chr2_1:50456312-50456331 | None:intergenic | 45.0% |
| CAGAGTTCTCACAGCAACAA+TGG | - | chr2_1:50456324-50456343 | None:intergenic | 45.0% | |
| GTTTCACTGTTTGCAGAGTG+CGG | - | chr2_1:50456349-50456368 | None:intergenic | 45.0% | |
| CTCTGCAAACAGTGAAACCA+TGG | + | chr2_1:50456351-50456370 | Msa0210360:exon | 45.0% | |
| GATCCGCTTGTTCTTACCAA+CGG | - | chr2_1:50456377-50456396 | None:intergenic | 45.0% | |
| AGAACAAGCGGATCTCTAAG+GGG | + | chr2_1:50456383-50456402 | Msa0210360:CDS | 45.0% | |
| ! | ATCTCTAAGGGGAAGAAAGG+TGG | + | chr2_1:50456394-50456413 | Msa0210360:CDS | 45.0% |
| TGCTGATCCATTTGCCAAGA+AGG | + | chr2_1:50456520-50456539 | Msa0210360:CDS | 45.0% | |
| ! | TAAGGCTCCTTCAGTTTTCC+AGG | + | chr2_1:50456556-50456575 | Msa0210360:CDS | 45.0% |
| CAAGGACTACCTGTTTGGAT+TGG | - | chr2_1:50456988-50457007 | None:intergenic | 45.0% | |
| CAATCCAAACAGGTAGTCCT+TGG | + | chr2_1:50456986-50457005 | Msa0210360:intron | 45.0% | |
| CTTGTAGTGCAGAAAACAGC+GGG | + | chr2_1:50457068-50457087 | Msa0210360:intron | 45.0% | |
| ! | GCTCAAGCATAGAGTGTTTG+AGG | + | chr2_1:50457733-50457752 | Msa0210360:CDS | 45.0% |
| AACTCTTGTTGAAGCCCATG+TGG | + | chr2_1:50457996-50458015 | Msa0210360:CDS | 45.0% | |
| ! | CAGTAGTCTTGACATCCACA+TGG | - | chr2_1:50458014-50458033 | None:intergenic | 45.0% |
| ACATGTGTTGGATACCGTGT+TGG | - | chr2_1:50458199-50458218 | None:intergenic | 45.0% | |
| TGTTCAGATCCGTAGGAAGA+TGG | + | chr2_1:50458348-50458367 | Msa0210360:intron | 45.0% | |
| ATCTCCTTCCCAATCATCTC+GGG | - | chr2_1:50458436-50458455 | None:intergenic | 45.0% | |
| CAAGGGGTAAATACTAGACG+TGG | - | chr2_1:50458467-50458486 | None:intergenic | 45.0% | |
| GGATGAACACATTCTGCAAG+GGG | - | chr2_1:50458483-50458502 | None:intergenic | 45.0% | |
| CGGATGAACACATTCTGCAA+GGG | - | chr2_1:50458484-50458503 | None:intergenic | 45.0% | |
| TCGGATGAACACATTCTGCA+AGG | - | chr2_1:50458485-50458504 | None:intergenic | 45.0% | |
| GGTTCATGGAGATTACTCTG+AGG | + | chr2_1:50458958-50458977 | Msa0210360:intron | 45.0% | |
| ! | GGAGATTACTCTGAGGATGT+TGG | + | chr2_1:50458965-50458984 | Msa0210360:CDS | 45.0% |
| ATGTTGGCACAAAGGTAGAG+AGG | + | chr2_1:50458981-50459000 | Msa0210360:CDS | 45.0% | |
| ! | GTTTCTCACCCCAAGTCTTT+TGG | + | chr2_1:50459223-50459242 | Msa0210360:intron | 45.0% |
| GGACGCAAAACCAAAAGACT+TGG | - | chr2_1:50459236-50459255 | None:intergenic | 45.0% | |
| !! | ATATTATGAAAATAAATATT+GGG | - | chr2_1:50458602-50458621 | None:intergenic | 5.0% |
| !!! | AACAAAATTAAAATTTTAAA+AGG | - | chr2_1:50458832-50458851 | None:intergenic | 5.0% |
| AACAGTGAAACCATGGCCGT+TGG | + | chr2_1:50456358-50456377 | Msa0210360:exon | 50.0% | |
| CTTGTTCTTACCAACGGCCA+TGG | - | chr2_1:50456371-50456390 | None:intergenic | 50.0% | |
| ! | TGGCCGTTGGTAAGAACAAG+CGG | + | chr2_1:50456371-50456390 | Msa0210360:CDS | 50.0% |
| ! | CGGATCTCTAAGGGGAAGAA+AGG | + | chr2_1:50456391-50456410 | Msa0210360:CDS | 50.0% |
| TCTTGCCGACATTCTTCACC+TGG | - | chr2_1:50456577-50456596 | None:intergenic | 50.0% | |
| CAGTCCAAGGACTACCTGTT+TGG | - | chr2_1:50456993-50457012 | None:intergenic | 50.0% | |
| !! | TGTTGGTCTTGCTTGTGGCA+GGG | - | chr2_1:50457361-50457380 | None:intergenic | 50.0% |
| !! | ATGTTGGTCTTGCTTGTGGC+AGG | - | chr2_1:50457362-50457381 | None:intergenic | 50.0% |
| TGAGGTCATTGGTGCGTAAG+TGG | + | chr2_1:50457971-50457990 | Msa0210360:CDS | 50.0% | |
| TACCAAGAGGAGAGCTAACC+AGG | + | chr2_1:50458068-50458087 | Msa0210360:CDS | 50.0% | |
| CATAACAGGTCCTCTTCACC+TGG | - | chr2_1:50458089-50458108 | None:intergenic | 50.0% | |
| CATTCCCGAGATGATTGGGA+AGG | + | chr2_1:50458429-50458448 | Msa0210360:CDS | 50.0% | |
| ! | CTCTGAGGATGTTGGCACAA+AGG | + | chr2_1:50458973-50458992 | Msa0210360:CDS | 50.0% |
| AGAGAGGCCTGCTGATGAAA+TGG | + | chr2_1:50458997-50459016 | Msa0210360:CDS | 50.0% | |
| GCCTGCTGATGAAATGGTGA+CGG | + | chr2_1:50459003-50459022 | Msa0210360:CDS | 50.0% | |
| TCCGTCACCATTTCATCAGC+AGG | - | chr2_1:50459007-50459026 | None:intergenic | 50.0% | |
| !! | TGCTGATGAAATGGTGACGG+AGG | + | chr2_1:50459006-50459025 | Msa0210360:CDS | 50.0% |
| ACCCTCGTGTCTCGTACTCA+GGG | + | chr2_1:50456596-50456615 | Msa0210360:CDS | 55.0% | |
| ACCCTGAGTACGAGACACGA+GGG | - | chr2_1:50456600-50456619 | None:intergenic | 55.0% | |
| TACCCTGAGTACGAGACACG+AGG | - | chr2_1:50456601-50456620 | None:intergenic | 55.0% | |
| ! | GTCTCGTACTCAGGGTACCA+AGG | + | chr2_1:50456604-50456623 | Msa0210360:CDS | 55.0% |
| CATGGGAATGTCATGTCCCC+TGG | - | chr2_1:50457464-50457483 | None:intergenic | 55.0% | |
| GGGACGAAGACCATGCATTC+AGG | + | chr2_1:50457777-50457796 | Msa0210360:CDS | 55.0% | |
| ! | CACCTGGTTAGCTCTCCTCT+TGG | - | chr2_1:50458073-50458092 | None:intergenic | 55.0% |
| GGAGAGCTAACCAGGTGAAG+AGG | + | chr2_1:50458076-50458095 | Msa0210360:CDS | 55.0% | |
| GACCCTCGTGTCTCGTACTC+AGG | + | chr2_1:50456595-50456614 | Msa0210360:CDS | 60.0% | |
| CTTGTGGCAGGGCAGAAGTG+GGG | - | chr2_1:50457350-50457369 | None:intergenic | 60.0% | |
| GCTTGTGGCAGGGCAGAAGT+GGG | - | chr2_1:50457351-50457370 | None:intergenic | 60.0% | |
| TGCTTGTGGCAGGGCAGAAG+TGG | - | chr2_1:50457352-50457371 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 50456303 | 50459392 | 50456303 | ID=Msa0210360;Name=Msa0210360 |
| chr2_1 | mRNA | 50456303 | 50459392 | 50456303 | ID=Msa0210360-mRNA-1;Parent=Msa0210360;Name=Msa0210360-mRNA-1;_AED=0.06;_eAED=0.06;_QI=67|1|1|1|0.83|0.71|7|306|261 |
| chr2_1 | exon | 50456303 | 50456428 | 50456303 | ID=Msa0210360-mRNA-1:exon:13899;Parent=Msa0210360-mRNA-1 |
| chr2_1 | exon | 50456520 | 50456625 | 50456520 | ID=Msa0210360-mRNA-1:exon:13900;Parent=Msa0210360-mRNA-1 |
| chr2_1 | exon | 50457719 | 50457856 | 50457719 | ID=Msa0210360-mRNA-1:exon:13901;Parent=Msa0210360-mRNA-1 |
| chr2_1 | exon | 50457946 | 50458131 | 50457946 | ID=Msa0210360-mRNA-1:exon:13902;Parent=Msa0210360-mRNA-1 |
| chr2_1 | exon | 50458355 | 50458555 | 50458355 | ID=Msa0210360-mRNA-1:exon:13903;Parent=Msa0210360-mRNA-1 |
| chr2_1 | exon | 50458959 | 50459205 | 50458959 | ID=Msa0210360-mRNA-1:exon:13904;Parent=Msa0210360-mRNA-1 |
| chr2_1 | exon | 50459238 | 50459392 | 50459238 | ID=Msa0210360-mRNA-1:exon:13905;Parent=Msa0210360-mRNA-1 |
| chr2_1 | five_prime_UTR | 50456303 | 50456369 | 50456303 | ID=Msa0210360-mRNA-1:five_prime_utr;Parent=Msa0210360-mRNA-1 |
| chr2_1 | CDS | 50456370 | 50456428 | 50456370 | ID=Msa0210360-mRNA-1:cds;Parent=Msa0210360-mRNA-1 |
| chr2_1 | CDS | 50456520 | 50456625 | 50456520 | ID=Msa0210360-mRNA-1:cds;Parent=Msa0210360-mRNA-1 |
| chr2_1 | CDS | 50457719 | 50457856 | 50457719 | ID=Msa0210360-mRNA-1:cds;Parent=Msa0210360-mRNA-1 |
| chr2_1 | CDS | 50457946 | 50458131 | 50457946 | ID=Msa0210360-mRNA-1:cds;Parent=Msa0210360-mRNA-1 |
| chr2_1 | CDS | 50458355 | 50458555 | 50458355 | ID=Msa0210360-mRNA-1:cds;Parent=Msa0210360-mRNA-1 |
| chr2_1 | CDS | 50458959 | 50459054 | 50458959 | ID=Msa0210360-mRNA-1:cds;Parent=Msa0210360-mRNA-1 |
| chr2_1 | three_prime_UTR | 50459055 | 50459205 | 50459055 | ID=Msa0210360-mRNA-1:three_prime_utr;Parent=Msa0210360-mRNA-1 |
| chr2_1 | three_prime_UTR | 50459238 | 50459392 | 50459238 | ID=Msa0210360-mRNA-1:three_prime_utr;Parent=Msa0210360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
