Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377500 | XP_003602464.1 | 96.624 | 237 | 5 | 1 | 1 | 234 | 1 | 237 | 1.30e-165 | 466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377500 | sp|Q8L5T5|LBD15_ARATH | 65.690 | 239 | 62 | 5 | 1 | 234 | 1 | 224 | 3.42e-84 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377500 | G7J9S3 | 96.624 | 237 | 5 | 1 | 1 | 234 | 1 | 237 | 6.20e-166 | 466 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0377500 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036550 | Msa0377500 | 0.802306 | 5.971458e-49 | -8.615850e-47 |
| Msa0176600 | Msa0377500 | 0.808419 | 3.125988e-50 | -8.615850e-47 |
| Msa0377500 | Msa0530660 | 0.806685 | 7.295547e-50 | -8.615850e-47 |
| Msa0377500 | Msa0587180 | 0.802896 | 4.512279e-49 | -8.615850e-47 |
| Msa0377500 | Msa0626980 | 0.804239 | 2.375994e-49 | -8.615850e-47 |
| Msa0377500 | Msa0627360 | 0.805358 | 1.387429e-49 | -8.615850e-47 |
| Msa0377500 | Msa0673940 | 0.814664 | 1.372946e-51 | -8.615850e-47 |
| Msa0377500 | Msa1121080 | 0.802876 | 4.556390e-49 | -8.615850e-47 |
| Msa0377500 | Msa1156670 | 0.805725 | 1.161905e-49 | -8.615850e-47 |
| Msa0377500 | Msa1173450 | 0.883955 | 2.893707e-71 | -8.615850e-47 |
| Msa0377500 | Msa1395720 | 0.800193 | 1.616969e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377500 | MtrunA17_Chr3g0129071 | 96.624 | 237 | 5 | 1 | 1 | 234 | 1 | 237 | 1.19e-169 | 466 |
| Msa0377500 | MtrunA17_Chr5g0438091 | 67.234 | 235 | 35 | 9 | 1 | 233 | 1 | 195 | 1.51e-92 | 270 |
| Msa0377500 | MtrunA17_Chr5g0432451 | 73.750 | 160 | 34 | 3 | 1 | 158 | 1 | 154 | 2.63e-73 | 222 |
| Msa0377500 | MtrunA17_Chr2g0311601 | 62.500 | 112 | 42 | 0 | 43 | 154 | 9 | 120 | 5.64e-49 | 158 |
| Msa0377500 | MtrunA17_Chr4g0043421 | 60.345 | 116 | 46 | 0 | 46 | 161 | 14 | 129 | 1.34e-48 | 157 |
| Msa0377500 | MtrunA17_Chr5g0437571 | 66.667 | 108 | 36 | 0 | 46 | 153 | 5 | 112 | 1.42e-48 | 157 |
| Msa0377500 | MtrunA17_Chr3g0114061 | 63.393 | 112 | 41 | 0 | 43 | 154 | 4 | 115 | 6.71e-48 | 155 |
| Msa0377500 | MtrunA17_Chr4g0058651 | 61.468 | 109 | 42 | 0 | 46 | 154 | 10 | 118 | 1.03e-44 | 148 |
| Msa0377500 | MtrunA17_Chr3g0106101 | 57.759 | 116 | 49 | 0 | 46 | 161 | 6 | 121 | 1.83e-44 | 147 |
| Msa0377500 | MtrunA17_Chr7g0227511 | 61.905 | 105 | 40 | 0 | 46 | 150 | 10 | 114 | 2.18e-44 | 147 |
| Msa0377500 | MtrunA17_Chr3g0117121 | 60.550 | 109 | 43 | 0 | 46 | 154 | 9 | 117 | 8.13e-44 | 145 |
| Msa0377500 | MtrunA17_Chr6g0449641 | 53.913 | 115 | 53 | 0 | 46 | 160 | 8 | 122 | 6.51e-43 | 142 |
| Msa0377500 | MtrunA17_Chr3g0115431 | 60.952 | 105 | 41 | 0 | 46 | 150 | 8 | 112 | 6.07e-42 | 142 |
| Msa0377500 | MtrunA17_Chr5g0402611 | 60.000 | 105 | 42 | 0 | 46 | 150 | 7 | 111 | 3.92e-41 | 142 |
| Msa0377500 | MtrunA17_Chr6g0449651 | 57.143 | 105 | 45 | 0 | 46 | 150 | 66 | 170 | 5.46e-41 | 139 |
| Msa0377500 | MtrunA17_Chr4g0030001 | 50.407 | 123 | 60 | 1 | 44 | 165 | 21 | 143 | 2.20e-40 | 137 |
| Msa0377500 | MtrunA17_Chr3g0097221 | 57.009 | 107 | 46 | 0 | 46 | 152 | 6 | 112 | 2.29e-40 | 140 |
| Msa0377500 | MtrunA17_Chr7g0245871 | 63.725 | 102 | 36 | 1 | 47 | 147 | 27 | 128 | 4.93e-40 | 137 |
| Msa0377500 | MtrunA17_Chr1g0200201 | 46.809 | 141 | 74 | 1 | 48 | 188 | 73 | 212 | 2.78e-39 | 135 |
| Msa0377500 | MtrunA17_Chr3g0113891 | 60.825 | 97 | 38 | 0 | 48 | 144 | 15 | 111 | 1.25e-38 | 132 |
| Msa0377500 | MtrunA17_Chr5g0437401 | 56.863 | 102 | 44 | 0 | 48 | 149 | 12 | 113 | 1.59e-37 | 129 |
| Msa0377500 | MtrunA17_Chr8g0353981 | 56.604 | 106 | 46 | 0 | 46 | 151 | 6 | 111 | 4.52e-36 | 127 |
| Msa0377500 | MtrunA17_Chr7g0225111 | 52.381 | 105 | 50 | 0 | 48 | 152 | 6 | 110 | 1.17e-35 | 122 |
| Msa0377500 | MtrunA17_Chr6g0460951 | 51.327 | 113 | 54 | 1 | 44 | 155 | 37 | 149 | 1.23e-35 | 126 |
| Msa0377500 | MtrunA17_Chr7g0260971 | 53.333 | 105 | 48 | 1 | 44 | 147 | 11 | 115 | 2.87e-35 | 124 |
| Msa0377500 | MtrunA17_Chr8g0351701 | 55.140 | 107 | 47 | 1 | 47 | 152 | 23 | 129 | 3.16e-35 | 125 |
| Msa0377500 | MtrunA17_Chr1g0184281 | 52.679 | 112 | 51 | 2 | 46 | 155 | 14 | 125 | 1.06e-34 | 123 |
| Msa0377500 | MtrunA17_Chr8g0351721 | 56.863 | 102 | 43 | 1 | 47 | 147 | 18 | 119 | 6.77e-34 | 121 |
| Msa0377500 | MtrunA17_Chr5g0444351 | 46.825 | 126 | 64 | 1 | 48 | 173 | 6 | 128 | 1.10e-33 | 118 |
| Msa0377500 | MtrunA17_Chr7g0261031 | 55.446 | 101 | 42 | 2 | 46 | 144 | 7 | 106 | 4.21e-33 | 119 |
| Msa0377500 | MtrunA17_Chr1g0184271 | 50.407 | 123 | 51 | 3 | 47 | 167 | 12 | 126 | 6.20e-33 | 119 |
| Msa0377500 | MtrunA17_Chr5g0435641 | 39.634 | 164 | 93 | 4 | 46 | 207 | 6 | 165 | 4.36e-32 | 115 |
| Msa0377500 | MtrunA17_Chr8g0374601 | 50.000 | 106 | 53 | 0 | 45 | 150 | 24 | 129 | 6.88e-31 | 115 |
| Msa0377500 | MtrunA17_Chr8g0374581 | 48.598 | 107 | 54 | 1 | 45 | 150 | 6 | 112 | 1.20e-27 | 105 |
| Msa0377500 | MtrunA17_Chr8g0374591 | 43.925 | 107 | 60 | 0 | 44 | 150 | 5 | 111 | 2.11e-27 | 102 |
| Msa0377500 | MtrunA17_Chr7g0245861 | 53.333 | 90 | 39 | 2 | 47 | 133 | 12 | 101 | 2.50e-25 | 96.7 |
| Msa0377500 | MtrunA17_Chr6g0452691 | 41.053 | 95 | 55 | 1 | 48 | 141 | 10 | 104 | 2.99e-24 | 95.1 |
| Msa0377500 | MtrunA17_Chr6g0460941 | 46.067 | 89 | 47 | 1 | 47 | 134 | 7 | 95 | 3.26e-24 | 92.4 |
| Msa0377500 | MtrunA17_Chr6g0452671 | 38.235 | 102 | 63 | 0 | 43 | 144 | 7 | 108 | 4.68e-23 | 92.8 |
| Msa0377500 | MtrunA17_Chr4g0059901 | 39.423 | 104 | 63 | 0 | 44 | 147 | 7 | 110 | 1.02e-22 | 93.2 |
| Msa0377500 | MtrunA17_Chr6g0452661 | 37.168 | 113 | 66 | 3 | 42 | 150 | 1 | 112 | 1.67e-22 | 92.4 |
| Msa0377500 | MtrunA17_Chr2g0330201 | 40.952 | 105 | 60 | 2 | 44 | 147 | 16 | 119 | 4.15e-21 | 89.4 |
| Msa0377500 | MtrunA17_Chr4g0040831 | 37.113 | 97 | 61 | 0 | 48 | 144 | 16 | 112 | 1.10e-20 | 86.3 |
| Msa0377500 | MtrunA17_Chr8g0342351 | 35.780 | 109 | 68 | 2 | 44 | 151 | 9 | 116 | 1.63e-20 | 87.4 |
| Msa0377500 | MtrunA17_Chr5g0439111 | 37.273 | 110 | 61 | 3 | 42 | 143 | 1 | 110 | 1.21e-19 | 84.3 |
| Msa0377500 | MtrunA17_Chr4g0055441 | 38.614 | 101 | 57 | 2 | 48 | 143 | 3 | 103 | 6.13e-19 | 80.5 |
| Msa0377500 | MtrunA17_Chr2g0326041 | 59.615 | 52 | 21 | 0 | 44 | 95 | 30 | 81 | 4.91e-18 | 76.3 |
| Msa0377500 | MtrunA17_Chr2g0326051 | 51.562 | 64 | 31 | 0 | 92 | 155 | 5 | 68 | 1.31e-15 | 70.9 |
| Msa0377500 | MtrunA17_Chr4g0046201 | 34.091 | 88 | 58 | 0 | 46 | 133 | 5 | 92 | 8.76e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377500 | AT2G40470.1 | 65.690 | 239 | 62 | 5 | 1 | 234 | 1 | 224 | 3.47e-85 | 253 |
| Msa0377500 | AT2G30340.1 | 69.512 | 164 | 45 | 3 | 1 | 159 | 1 | 164 | 1.61e-77 | 234 |
| Msa0377500 | AT2G30340.2 | 69.182 | 159 | 44 | 3 | 5 | 158 | 6 | 164 | 1.79e-74 | 227 |
| Msa0377500 | AT2G40470.2 | 66.505 | 206 | 55 | 3 | 32 | 234 | 5 | 199 | 1.36e-73 | 222 |
| Msa0377500 | AT2G30130.1 | 61.864 | 118 | 41 | 1 | 36 | 153 | 1 | 114 | 7.05e-47 | 154 |
| Msa0377500 | AT1G31320.1 | 63.717 | 113 | 41 | 0 | 46 | 158 | 12 | 124 | 8.10e-45 | 148 |
| Msa0377500 | AT3G27650.1 | 58.120 | 117 | 49 | 0 | 34 | 150 | 26 | 142 | 2.90e-44 | 146 |
| Msa0377500 | AT1G07900.1 | 45.223 | 157 | 80 | 1 | 44 | 194 | 30 | 186 | 6.30e-43 | 144 |
| Msa0377500 | AT1G16530.1 | 52.893 | 121 | 49 | 2 | 29 | 148 | 3 | 116 | 7.06e-43 | 143 |
| Msa0377500 | AT2G28500.1 | 50.794 | 126 | 62 | 0 | 44 | 169 | 52 | 177 | 1.29e-42 | 144 |
| Msa0377500 | AT5G63090.4 | 58.559 | 111 | 46 | 0 | 46 | 156 | 10 | 120 | 2.01e-42 | 142 |
| Msa0377500 | AT5G63090.3 | 58.559 | 111 | 46 | 0 | 46 | 156 | 10 | 120 | 2.01e-42 | 142 |
| Msa0377500 | AT5G63090.2 | 58.559 | 111 | 46 | 0 | 46 | 156 | 10 | 120 | 2.01e-42 | 142 |
| Msa0377500 | AT5G63090.1 | 58.559 | 111 | 46 | 0 | 46 | 156 | 10 | 120 | 2.01e-42 | 142 |
| Msa0377500 | AT5G66870.1 | 60.000 | 105 | 42 | 0 | 46 | 150 | 6 | 110 | 9.04e-41 | 142 |
| Msa0377500 | AT1G65620.1 | 56.000 | 125 | 54 | 1 | 43 | 166 | 5 | 129 | 1.56e-39 | 135 |
| Msa0377500 | AT1G65620.4 | 56.000 | 125 | 54 | 1 | 43 | 166 | 5 | 129 | 1.56e-39 | 135 |
| Msa0377500 | AT1G65620.3 | 56.000 | 125 | 54 | 1 | 43 | 166 | 5 | 129 | 1.56e-39 | 135 |
| Msa0377500 | AT1G65620.5 | 56.000 | 125 | 54 | 1 | 43 | 166 | 5 | 129 | 1.56e-39 | 135 |
| Msa0377500 | AT1G65620.2 | 56.000 | 125 | 54 | 1 | 43 | 166 | 5 | 129 | 1.56e-39 | 135 |
| Msa0377500 | AT2G23660.2 | 57.143 | 105 | 45 | 0 | 46 | 150 | 4 | 108 | 3.98e-39 | 137 |
| Msa0377500 | AT2G23660.3 | 57.143 | 105 | 45 | 0 | 46 | 150 | 4 | 108 | 3.98e-39 | 137 |
| Msa0377500 | AT2G23660.1 | 57.143 | 105 | 45 | 0 | 46 | 150 | 4 | 108 | 3.98e-39 | 137 |
| Msa0377500 | AT3G26660.1 | 56.000 | 100 | 44 | 0 | 48 | 147 | 6 | 105 | 1.51e-37 | 128 |
| Msa0377500 | AT3G26620.1 | 56.000 | 100 | 44 | 0 | 48 | 147 | 6 | 105 | 1.82e-37 | 127 |
| Msa0377500 | AT3G11090.1 | 57.282 | 103 | 44 | 0 | 48 | 150 | 12 | 114 | 4.72e-37 | 128 |
| Msa0377500 | AT2G42430.1 | 47.154 | 123 | 64 | 1 | 37 | 158 | 5 | 127 | 1.47e-35 | 126 |
| Msa0377500 | AT4G00210.1 | 56.863 | 102 | 43 | 1 | 47 | 147 | 11 | 112 | 9.53e-35 | 124 |
| Msa0377500 | AT3G58190.1 | 57.000 | 100 | 40 | 2 | 47 | 144 | 11 | 109 | 5.70e-34 | 122 |
| Msa0377500 | AT3G03760.1 | 51.852 | 108 | 51 | 1 | 46 | 152 | 50 | 157 | 6.79e-34 | 123 |
| Msa0377500 | AT2G31310.1 | 51.961 | 102 | 48 | 1 | 46 | 146 | 6 | 107 | 1.17e-32 | 117 |
| Msa0377500 | AT4G00220.1 | 54.808 | 104 | 46 | 1 | 50 | 152 | 20 | 123 | 2.77e-32 | 117 |
| Msa0377500 | AT5G06080.1 | 44.828 | 145 | 72 | 4 | 46 | 189 | 6 | 143 | 9.37e-32 | 115 |
| Msa0377500 | AT2G45420.1 | 51.923 | 104 | 49 | 1 | 50 | 152 | 40 | 143 | 3.63e-31 | 115 |
| Msa0377500 | AT2G42440.1 | 50.495 | 101 | 47 | 2 | 46 | 144 | 6 | 105 | 3.72e-30 | 112 |
| Msa0377500 | AT2G45410.1 | 55.435 | 92 | 40 | 1 | 50 | 140 | 19 | 110 | 6.90e-29 | 107 |
| Msa0377500 | AT3G50510.1 | 41.905 | 105 | 61 | 0 | 46 | 150 | 11 | 115 | 2.28e-26 | 101 |
| Msa0377500 | AT3G50510.2 | 41.905 | 105 | 61 | 0 | 46 | 150 | 11 | 115 | 2.28e-26 | 101 |
| Msa0377500 | AT3G47870.1 | 37.037 | 108 | 68 | 0 | 44 | 151 | 33 | 140 | 9.58e-24 | 97.4 |
| Msa0377500 | AT1G72980.1 | 42.308 | 104 | 60 | 0 | 44 | 147 | 10 | 113 | 2.95e-23 | 94.0 |
| Msa0377500 | AT5G35900.1 | 37.255 | 102 | 64 | 0 | 46 | 147 | 4 | 105 | 6.80e-21 | 87.4 |
| Msa0377500 | AT3G13850.1 | 33.962 | 106 | 70 | 0 | 48 | 153 | 37 | 142 | 2.61e-20 | 87.0 |
| Msa0377500 | AT1G06280.1 | 48.052 | 77 | 40 | 0 | 48 | 124 | 25 | 101 | 2.43e-19 | 83.2 |
| Msa0377500 | AT2G19820.1 | 32.990 | 97 | 64 | 1 | 46 | 141 | 11 | 107 | 2.46e-15 | 70.5 |
Find 64 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATAATATTTCCTATTT+TGG | 0.135067 | 3_1:+77958966 | Msa0377500:CDS |
| CACAAGGGGTTATAGTATTT+AGG | 0.181231 | 3_1:-77958324 | None:intergenic |
| AAATACTTAAATACAAATTA+AGG | 0.183471 | 3_1:+77958724 | Msa0377500:CDS |
| GTCATTAATTATTATTATTC+TGG | 0.194641 | 3_1:+77959118 | Msa0377500:three_prime_UTR |
| CATTTGTCATCAATCAATTA+AGG | 0.232484 | 3_1:+77959028 | Msa0377500:three_prime_UTR |
| TGGTTCATGAGGAGAGAAAT+AGG | 0.287589 | 3_1:-77958398 | None:intergenic |
| ATACCTTTCTCTGGACATTC+AGG | 0.288643 | 3_1:-77957972 | None:intergenic |
| GCAAGTTAATAATAATAATA+TGG | 0.296709 | 3_1:-77959154 | None:intergenic |
| AGGCTAAGAGATCCAGTTTA+TGG | 0.306813 | 3_1:+77958627 | Msa0377500:CDS |
| ATCCCTCTGTTGAAAGTATA+TGG | 0.313628 | 3_1:-77958919 | None:intergenic |
| ACAAGGGGTTATAGTATTTA+GGG | 0.313905 | 3_1:-77958323 | None:intergenic |
| GGAGGTGGAGGCGGCGGCGG+TGG | 0.316051 | 3_1:-77958864 | None:intergenic |
| GGTGGAGGCGGCGGCGGTGG+CGG | 0.317631 | 3_1:-77958861 | None:intergenic |
| TTCAAATTCATCAAATCAAA+TGG | 0.330799 | 3_1:+77958270 | Msa0377500:CDS |
| GTTATAGTATTTAGGGTTCC+TGG | 0.351578 | 3_1:-77958316 | None:intergenic |
| ACTTGAAATTGTGCTATAGT+TGG | 0.363521 | 3_1:-77958943 | None:intergenic |
| AGAGGAGGTGGAGGCGGCGG+CGG | 0.367601 | 3_1:-77958867 | None:intergenic |
| GGAAGAGGAGGTGGAGGCGG+CGG | 0.373511 | 3_1:-77958870 | None:intergenic |
| GCACCCATGCATCCATAAAC+TGG | 0.381798 | 3_1:-77958639 | None:intergenic |
| GGAGAGAAATAGGGAGAAAA+GGG | 0.384566 | 3_1:-77958388 | None:intergenic |
| GATGAATTAGAGGTTGTAGA+AGG | 0.385231 | 3_1:-77958891 | None:intergenic |
| CTTAATTGATTGATGACAAA+TGG | 0.386385 | 3_1:-77959027 | None:intergenic |
| GTCTATTATATACCTTTCTC+TGG | 0.395976 | 3_1:-77957981 | None:intergenic |
| AGGGAGAGATTTGATGAGAT+AGG | 0.400606 | 3_1:+77958214 | Msa0377500:intron |
| AGGAGAGAAATAGGGAGAAA+AGG | 0.419838 | 3_1:-77958389 | None:intergenic |
| ACATCCACAGAGGAATTAGA+AGG | 0.421824 | 3_1:-77958825 | None:intergenic |
| GTTGTAGAAGGAAGAGGAGG+TGG | 0.426747 | 3_1:-77958879 | None:intergenic |
| TATGGAAGAAGATGAATTAG+AGG | 0.432320 | 3_1:-77958901 | None:intergenic |
| GCAGAACTCAATCTATTAAG+AGG | 0.440766 | 3_1:+77958699 | Msa0377500:CDS |
| CTTGAAATTGTGCTATAGTT+GGG | 0.441064 | 3_1:-77958942 | None:intergenic |
| GAAGGAAGAGGAGGTGGAGG+CGG | 0.445642 | 3_1:-77958873 | None:intergenic |
| TTAGAGGTTGTAGAAGGAAG+AGG | 0.449707 | 3_1:-77958885 | None:intergenic |
| AATTTCTGCATTGCAACAAC+AGG | 0.457176 | 3_1:+77958662 | Msa0377500:CDS |
| GTAGAAGGAAGAGGAGGTGG+AGG | 0.462652 | 3_1:-77958876 | None:intergenic |
| ATGGGAAGAAGACATATGTT+AGG | 0.472989 | 3_1:+77958289 | Msa0377500:CDS |
| AATACTTAAATACAAATTAA+GGG | 0.483814 | 3_1:+77958725 | Msa0377500:CDS |
| TCAAATTCATCAAATCAAAT+GGG | 0.487371 | 3_1:+77958271 | Msa0377500:CDS |
| GGTTCATGAGGAGAGAAATA+GGG | 0.492582 | 3_1:-77958397 | None:intergenic |
| GGGAGAGATTTGATGAGATA+GGG | 0.496242 | 3_1:+77958215 | Msa0377500:intron |
| TTCCATATACTTTCAACAGA+GGG | 0.521455 | 3_1:+77958917 | Msa0377500:CDS |
| AGATCCAGTTTATGGATGCA+TGG | 0.526865 | 3_1:+77958635 | Msa0377500:CDS |
| GAAAATGAGAGTATTGATGC+TGG | 0.545341 | 3_1:+77959065 | Msa0377500:three_prime_UTR |
| ATTGCAAGTTGATGAGATGA+AGG | 0.553196 | 3_1:-77958798 | None:intergenic |
| AATAGCTTACATGCTGCACA+AGG | 0.566069 | 3_1:-77958340 | None:intergenic |
| ATGCCTGAATGTCCAGAGAA+AGG | 0.569088 | 3_1:+77957969 | Msa0377500:exon |
| GATCCAGTTTATGGATGCAT+GGG | 0.578062 | 3_1:+77958636 | Msa0377500:CDS |
| GAGGTTGTAGAAGGAAGAGG+AGG | 0.579801 | 3_1:-77958882 | None:intergenic |
| GCAAACTTCTGTGGTTCATG+AGG | 0.583150 | 3_1:-77958409 | None:intergenic |
| AATAATTAATGACATACATG+AGG | 0.586937 | 3_1:-77959108 | None:intergenic |
| TGAACAGAAGCAAACTTCTG+TGG | 0.594520 | 3_1:-77958418 | None:intergenic |
| TAGCTTACATGCTGCACAAG+GGG | 0.599040 | 3_1:-77958338 | None:intergenic |
| GCTAGCAAGAGAGTCACAGA+AGG | 0.603922 | 3_1:-77957876 | None:intergenic |
| ATAGTATTTAGGGTTCCTGG+TGG | 0.604329 | 3_1:-77958313 | None:intergenic |
| CTTCCATATACTTTCAACAG+AGG | 0.625078 | 3_1:+77958916 | Msa0377500:CDS |
| AGACATATGTTAGGTCCACC+AGG | 0.627473 | 3_1:+77958298 | Msa0377500:CDS |
| GCTCCCTTCTAATTCCTCTG+TGG | 0.641688 | 3_1:+77958821 | Msa0377500:CDS |
| ATAATTAATGACATACATGA+GGG | 0.649715 | 3_1:-77959107 | None:intergenic |
| CATCCACAGAGGAATTAGAA+GGG | 0.657432 | 3_1:-77958824 | None:intergenic |
| ACTACTTTCATACTCAGAGA+GGG | 0.658412 | 3_1:+77957945 | Msa0377500:five_prime_UTR |
| TTGTTTATGAAGCAAATGTG+AGG | 0.672469 | 3_1:+77958607 | Msa0377500:CDS |
| CTAGCAAGAGAGTCACAGAA+GGG | 0.674355 | 3_1:-77957875 | None:intergenic |
| ATAGCTTACATGCTGCACAA+GGG | 0.680325 | 3_1:-77958339 | None:intergenic |
| TACTACTTTCATACTCAGAG+AGG | 0.681895 | 3_1:+77957944 | Msa0377500:five_prime_UTR |
| AGCAATAGAAACATCCACAG+AGG | 0.762696 | 3_1:-77958835 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATAAAATTAATATGA+TGG | - | chr3_1:77958091-77958110 | None:intergenic | 10.0% |
| !! | AAATACTTAAATACAAATTA+AGG | + | chr3_1:77958724-77958743 | Msa0377500:CDS | 10.0% |
| !! | AATACTTAAATACAAATTAA+GGG | + | chr3_1:77958725-77958744 | Msa0377500:CDS | 10.0% |
| !! | AACAAATAAAATTAATATGA+TGG | - | chr3_1:77958091-77958110 | None:intergenic | 10.0% |
| !! | AAATACTTAAATACAAATTA+AGG | + | chr3_1:77958724-77958743 | Msa0377500:CDS | 10.0% |
| !! | AATACTTAAATACAAATTAA+GGG | + | chr3_1:77958725-77958744 | Msa0377500:CDS | 10.0% |
| !!! | ATAATAACAATGTTTTTTCT+TGG | + | chr3_1:77958135-77958154 | Msa0377500:intron | 15.0% |
| !!! | AATATATATAATGTTTTAGG+AGG | + | chr3_1:77958548-77958567 | Msa0377500:intron | 15.0% |
| !! | GTCATTAATTATTATTATTC+TGG | + | chr3_1:77959118-77959137 | Msa0377500:three_prime_UTR | 15.0% |
| !! | GCAAGTTAATAATAATAATA+TGG | - | chr3_1:77959157-77959176 | None:intergenic | 15.0% |
| !!! | ATAATAACAATGTTTTTTCT+TGG | + | chr3_1:77958135-77958154 | Msa0377500:intron | 15.0% |
| !!! | AATATATATAATGTTTTAGG+AGG | + | chr3_1:77958548-77958567 | Msa0377500:intron | 15.0% |
| !! | GTCATTAATTATTATTATTC+TGG | + | chr3_1:77959118-77959137 | Msa0377500:three_prime_UTR | 15.0% |
| !! | GCAAGTTAATAATAATAATA+TGG | - | chr3_1:77959157-77959176 | None:intergenic | 15.0% |
| !! | AATTATTTGATGCAATTGTA+CGG | + | chr3_1:77958190-77958209 | Msa0377500:intron | 20.0% |
| !! | TTCAAATTCATCAAATCAAA+TGG | + | chr3_1:77958270-77958289 | Msa0377500:CDS | 20.0% |
| !! | TCAAATTCATCAAATCAAAT+GGG | + | chr3_1:77958271-77958290 | Msa0377500:CDS | 20.0% |
| !!! | GATGATAATATTTCCTATTT+TGG | + | chr3_1:77958966-77958985 | Msa0377500:CDS | 20.0% |
| !! | ATAATTAATGACATACATGA+GGG | - | chr3_1:77959110-77959129 | None:intergenic | 20.0% |
| !! | AATAATTAATGACATACATG+AGG | - | chr3_1:77959111-77959130 | None:intergenic | 20.0% |
| !! | AATTATTTGATGCAATTGTA+CGG | + | chr3_1:77958190-77958209 | Msa0377500:intron | 20.0% |
| !! | TTCAAATTCATCAAATCAAA+TGG | + | chr3_1:77958270-77958289 | Msa0377500:CDS | 20.0% |
| !! | TCAAATTCATCAAATCAAAT+GGG | + | chr3_1:77958271-77958290 | Msa0377500:CDS | 20.0% |
| !!! | GATGATAATATTTCCTATTT+TGG | + | chr3_1:77958966-77958985 | Msa0377500:CDS | 20.0% |
| !! | ATAATTAATGACATACATGA+GGG | - | chr3_1:77959110-77959129 | None:intergenic | 20.0% |
| !! | AATAATTAATGACATACATG+AGG | - | chr3_1:77959111-77959130 | None:intergenic | 20.0% |
| ! | TCAATAGTTAATTTCAAGCT+AGG | - | chr3_1:77958067-77958086 | None:intergenic | 25.0% |
| ! | CAGCAAAAATTAACCAAAAT+AGG | - | chr3_1:77958982-77959001 | None:intergenic | 25.0% |
| !! | CTTAATTGATTGATGACAAA+TGG | - | chr3_1:77959030-77959049 | None:intergenic | 25.0% |
| ! | CATTTGTCATCAATCAATTA+AGG | + | chr3_1:77959028-77959047 | Msa0377500:three_prime_UTR | 25.0% |
| ! | TCAATAGTTAATTTCAAGCT+AGG | - | chr3_1:77958067-77958086 | None:intergenic | 25.0% |
| ! | CAGCAAAAATTAACCAAAAT+AGG | - | chr3_1:77958982-77959001 | None:intergenic | 25.0% |
| !! | CTTAATTGATTGATGACAAA+TGG | - | chr3_1:77959030-77959049 | None:intergenic | 25.0% |
| ! | CATTTGTCATCAATCAATTA+AGG | + | chr3_1:77959028-77959047 | Msa0377500:three_prime_UTR | 25.0% |
| GTCTATTATATACCTTTCTC+TGG | - | chr3_1:77957984-77958003 | None:intergenic | 30.0% | |
| ACAAGGGGTTATAGTATTTA+GGG | - | chr3_1:77958326-77958345 | None:intergenic | 30.0% | |
| TTGTTTATGAAGCAAATGTG+AGG | + | chr3_1:77958607-77958626 | Msa0377500:CDS | 30.0% | |
| TATGGAAGAAGATGAATTAG+AGG | - | chr3_1:77958904-77958923 | None:intergenic | 30.0% | |
| TTCCATATACTTTCAACAGA+GGG | + | chr3_1:77958917-77958936 | Msa0377500:CDS | 30.0% | |
| CTTGAAATTGTGCTATAGTT+GGG | - | chr3_1:77958945-77958964 | None:intergenic | 30.0% | |
| ACTTGAAATTGTGCTATAGT+TGG | - | chr3_1:77958946-77958965 | None:intergenic | 30.0% | |
| GTCTATTATATACCTTTCTC+TGG | - | chr3_1:77957984-77958003 | None:intergenic | 30.0% | |
| ACAAGGGGTTATAGTATTTA+GGG | - | chr3_1:77958326-77958345 | None:intergenic | 30.0% | |
| TTGTTTATGAAGCAAATGTG+AGG | + | chr3_1:77958607-77958626 | Msa0377500:CDS | 30.0% | |
| TATGGAAGAAGATGAATTAG+AGG | - | chr3_1:77958904-77958923 | None:intergenic | 30.0% | |
| TTCCATATACTTTCAACAGA+GGG | + | chr3_1:77958917-77958936 | Msa0377500:CDS | 30.0% | |
| CTTGAAATTGTGCTATAGTT+GGG | - | chr3_1:77958945-77958964 | None:intergenic | 30.0% | |
| ACTTGAAATTGTGCTATAGT+TGG | - | chr3_1:77958946-77958965 | None:intergenic | 30.0% | |
| TACTACTTTCATACTCAGAG+AGG | + | chr3_1:77957944-77957963 | Msa0377500:five_prime_UTR | 35.0% | |
| ACTACTTTCATACTCAGAGA+GGG | + | chr3_1:77957945-77957964 | Msa0377500:five_prime_UTR | 35.0% | |
| GGGAAGAAGATAAAAAGAGA+AGG | + | chr3_1:77958235-77958254 | Msa0377500:CDS | 35.0% | |
| ATGGGAAGAAGACATATGTT+AGG | + | chr3_1:77958289-77958308 | Msa0377500:CDS | 35.0% | |
| ! | GTTATAGTATTTAGGGTTCC+TGG | - | chr3_1:77958319-77958338 | None:intergenic | 35.0% |
| CACAAGGGGTTATAGTATTT+AGG | - | chr3_1:77958327-77958346 | None:intergenic | 35.0% | |
| ! | GCTTCTGTTCACAAAGTTTT+TGG | + | chr3_1:77958430-77958449 | Msa0377500:CDS | 35.0% |
| CAACGTCTCAAAAATGCTAA+TGG | + | chr3_1:77958459-77958478 | Msa0377500:CDS | 35.0% | |
| AATTTCTGCATTGCAACAAC+AGG | + | chr3_1:77958662-77958681 | Msa0377500:CDS | 35.0% | |
| GCAGAACTCAATCTATTAAG+AGG | + | chr3_1:77958699-77958718 | Msa0377500:CDS | 35.0% | |
| !! | ATTGCAAGTTGATGAGATGA+AGG | - | chr3_1:77958801-77958820 | None:intergenic | 35.0% |
| GATGAATTAGAGGTTGTAGA+AGG | - | chr3_1:77958894-77958913 | None:intergenic | 35.0% | |
| CTTCCATATACTTTCAACAG+AGG | + | chr3_1:77958916-77958935 | Msa0377500:CDS | 35.0% | |
| ! | ATCCCTCTGTTGAAAGTATA+TGG | - | chr3_1:77958922-77958941 | None:intergenic | 35.0% |
| !! | GAAAATGAGAGTATTGATGC+TGG | + | chr3_1:77959065-77959084 | Msa0377500:three_prime_UTR | 35.0% |
| TACTACTTTCATACTCAGAG+AGG | + | chr3_1:77957944-77957963 | Msa0377500:five_prime_UTR | 35.0% | |
| ACTACTTTCATACTCAGAGA+GGG | + | chr3_1:77957945-77957964 | Msa0377500:five_prime_UTR | 35.0% | |
| GGGAAGAAGATAAAAAGAGA+AGG | + | chr3_1:77958235-77958254 | Msa0377500:CDS | 35.0% | |
| ATGGGAAGAAGACATATGTT+AGG | + | chr3_1:77958289-77958308 | Msa0377500:CDS | 35.0% | |
| ! | GTTATAGTATTTAGGGTTCC+TGG | - | chr3_1:77958319-77958338 | None:intergenic | 35.0% |
| CACAAGGGGTTATAGTATTT+AGG | - | chr3_1:77958327-77958346 | None:intergenic | 35.0% | |
| ! | GCTTCTGTTCACAAAGTTTT+TGG | + | chr3_1:77958430-77958449 | Msa0377500:CDS | 35.0% |
| CAACGTCTCAAAAATGCTAA+TGG | + | chr3_1:77958459-77958478 | Msa0377500:CDS | 35.0% | |
| AATTTCTGCATTGCAACAAC+AGG | + | chr3_1:77958662-77958681 | Msa0377500:CDS | 35.0% | |
| GCAGAACTCAATCTATTAAG+AGG | + | chr3_1:77958699-77958718 | Msa0377500:CDS | 35.0% | |
| !! | ATTGCAAGTTGATGAGATGA+AGG | - | chr3_1:77958801-77958820 | None:intergenic | 35.0% |
| GATGAATTAGAGGTTGTAGA+AGG | - | chr3_1:77958894-77958913 | None:intergenic | 35.0% | |
| CTTCCATATACTTTCAACAG+AGG | + | chr3_1:77958916-77958935 | Msa0377500:CDS | 35.0% | |
| ! | ATCCCTCTGTTGAAAGTATA+TGG | - | chr3_1:77958922-77958941 | None:intergenic | 35.0% |
| !! | GAAAATGAGAGTATTGATGC+TGG | + | chr3_1:77959065-77959084 | Msa0377500:three_prime_UTR | 35.0% |
| ATACCTTTCTCTGGACATTC+AGG | - | chr3_1:77957975-77957994 | None:intergenic | 40.0% | |
| ATTTGATGCAATTGTACGGC+AGG | + | chr3_1:77958194-77958213 | Msa0377500:intron | 40.0% | |
| TTTGATGCAATTGTACGGCA+GGG | + | chr3_1:77958195-77958214 | Msa0377500:intron | 40.0% | |
| AGGGAGAGATTTGATGAGAT+AGG | + | chr3_1:77958214-77958233 | Msa0377500:intron | 40.0% | |
| GGGAGAGATTTGATGAGATA+GGG | + | chr3_1:77958215-77958234 | Msa0377500:intron | 40.0% | |
| ! | ATAGTATTTAGGGTTCCTGG+TGG | - | chr3_1:77958316-77958335 | None:intergenic | 40.0% |
| ATAGCTTACATGCTGCACAA+GGG | - | chr3_1:77958342-77958361 | None:intergenic | 40.0% | |
| AATAGCTTACATGCTGCACA+AGG | - | chr3_1:77958343-77958362 | None:intergenic | 40.0% | |
| GGAGAGAAATAGGGAGAAAA+GGG | - | chr3_1:77958391-77958410 | None:intergenic | 40.0% | |
| AGGAGAGAAATAGGGAGAAA+AGG | - | chr3_1:77958392-77958411 | None:intergenic | 40.0% | |
| GGTTCATGAGGAGAGAAATA+GGG | - | chr3_1:77958400-77958419 | None:intergenic | 40.0% | |
| TGGTTCATGAGGAGAGAAAT+AGG | - | chr3_1:77958401-77958420 | None:intergenic | 40.0% | |
| TGAACAGAAGCAAACTTCTG+TGG | - | chr3_1:77958421-77958440 | None:intergenic | 40.0% | |
| !!! | TAGCATTTTTGAGACGTTGC+TGG | - | chr3_1:77958458-77958477 | None:intergenic | 40.0% |
| AGGCTAAGAGATCCAGTTTA+TGG | + | chr3_1:77958627-77958646 | Msa0377500:CDS | 40.0% | |
| AGATCCAGTTTATGGATGCA+TGG | + | chr3_1:77958635-77958654 | Msa0377500:CDS | 40.0% | |
| GATCCAGTTTATGGATGCAT+GGG | + | chr3_1:77958636-77958655 | Msa0377500:CDS | 40.0% | |
| CATCCACAGAGGAATTAGAA+GGG | - | chr3_1:77958827-77958846 | None:intergenic | 40.0% | |
| ACATCCACAGAGGAATTAGA+AGG | - | chr3_1:77958828-77958847 | None:intergenic | 40.0% | |
| AGCAATAGAAACATCCACAG+AGG | - | chr3_1:77958838-77958857 | None:intergenic | 40.0% | |
| TTAGAGGTTGTAGAAGGAAG+AGG | - | chr3_1:77958888-77958907 | None:intergenic | 40.0% | |
| ATACCTTTCTCTGGACATTC+AGG | - | chr3_1:77957975-77957994 | None:intergenic | 40.0% | |
| ATTTGATGCAATTGTACGGC+AGG | + | chr3_1:77958194-77958213 | Msa0377500:intron | 40.0% | |
| TTTGATGCAATTGTACGGCA+GGG | + | chr3_1:77958195-77958214 | Msa0377500:intron | 40.0% | |
| AGGGAGAGATTTGATGAGAT+AGG | + | chr3_1:77958214-77958233 | Msa0377500:intron | 40.0% | |
| GGGAGAGATTTGATGAGATA+GGG | + | chr3_1:77958215-77958234 | Msa0377500:intron | 40.0% | |
| ! | ATAGTATTTAGGGTTCCTGG+TGG | - | chr3_1:77958316-77958335 | None:intergenic | 40.0% |
| ATAGCTTACATGCTGCACAA+GGG | - | chr3_1:77958342-77958361 | None:intergenic | 40.0% | |
| AATAGCTTACATGCTGCACA+AGG | - | chr3_1:77958343-77958362 | None:intergenic | 40.0% | |
| GGAGAGAAATAGGGAGAAAA+GGG | - | chr3_1:77958391-77958410 | None:intergenic | 40.0% | |
| AGGAGAGAAATAGGGAGAAA+AGG | - | chr3_1:77958392-77958411 | None:intergenic | 40.0% | |
| GGTTCATGAGGAGAGAAATA+GGG | - | chr3_1:77958400-77958419 | None:intergenic | 40.0% | |
| TGGTTCATGAGGAGAGAAAT+AGG | - | chr3_1:77958401-77958420 | None:intergenic | 40.0% | |
| TGAACAGAAGCAAACTTCTG+TGG | - | chr3_1:77958421-77958440 | None:intergenic | 40.0% | |
| !!! | TAGCATTTTTGAGACGTTGC+TGG | - | chr3_1:77958458-77958477 | None:intergenic | 40.0% |
| AGGCTAAGAGATCCAGTTTA+TGG | + | chr3_1:77958627-77958646 | Msa0377500:CDS | 40.0% | |
| AGATCCAGTTTATGGATGCA+TGG | + | chr3_1:77958635-77958654 | Msa0377500:CDS | 40.0% | |
| GATCCAGTTTATGGATGCAT+GGG | + | chr3_1:77958636-77958655 | Msa0377500:CDS | 40.0% | |
| CATCCACAGAGGAATTAGAA+GGG | - | chr3_1:77958827-77958846 | None:intergenic | 40.0% | |
| ACATCCACAGAGGAATTAGA+AGG | - | chr3_1:77958828-77958847 | None:intergenic | 40.0% | |
| AGCAATAGAAACATCCACAG+AGG | - | chr3_1:77958838-77958857 | None:intergenic | 40.0% | |
| TTAGAGGTTGTAGAAGGAAG+AGG | - | chr3_1:77958888-77958907 | None:intergenic | 40.0% | |
| CTAGCAAGAGAGTCACAGAA+GGG | - | chr3_1:77957878-77957897 | None:intergenic | 45.0% | |
| ATGCCTGAATGTCCAGAGAA+AGG | + | chr3_1:77957969-77957988 | Msa0377500:exon | 45.0% | |
| AGACATATGTTAGGTCCACC+AGG | + | chr3_1:77958298-77958317 | Msa0377500:CDS | 45.0% | |
| TAGCTTACATGCTGCACAAG+GGG | - | chr3_1:77958341-77958360 | None:intergenic | 45.0% | |
| GCAAACTTCTGTGGTTCATG+AGG | - | chr3_1:77958412-77958431 | None:intergenic | 45.0% | |
| CTAGCAAGAGAGTCACAGAA+GGG | - | chr3_1:77957878-77957897 | None:intergenic | 45.0% | |
| ATGCCTGAATGTCCAGAGAA+AGG | + | chr3_1:77957969-77957988 | Msa0377500:exon | 45.0% | |
| AGACATATGTTAGGTCCACC+AGG | + | chr3_1:77958298-77958317 | Msa0377500:CDS | 45.0% | |
| TAGCTTACATGCTGCACAAG+GGG | - | chr3_1:77958341-77958360 | None:intergenic | 45.0% | |
| GCAAACTTCTGTGGTTCATG+AGG | - | chr3_1:77958412-77958431 | None:intergenic | 45.0% | |
| !!! | AATAATATATATAATGTTTT+AGG | + | chr3_1:77958545-77958564 | Msa0377500:intron | 5.0% |
| !!! | AATAATATATATAATGTTTT+AGG | + | chr3_1:77958545-77958564 | Msa0377500:intron | 5.0% |
| GCTAGCAAGAGAGTCACAGA+AGG | - | chr3_1:77957879-77957898 | None:intergenic | 50.0% | |
| GCACCCATGCATCCATAAAC+TGG | - | chr3_1:77958642-77958661 | None:intergenic | 50.0% | |
| GCTCCCTTCTAATTCCTCTG+TGG | + | chr3_1:77958821-77958840 | Msa0377500:CDS | 50.0% | |
| GTTGTAGAAGGAAGAGGAGG+TGG | - | chr3_1:77958882-77958901 | None:intergenic | 50.0% | |
| GAGGTTGTAGAAGGAAGAGG+AGG | - | chr3_1:77958885-77958904 | None:intergenic | 50.0% | |
| CAAGAGAGTCACAGAAGGGA+AGG | - | chr3_1:77957874-77957893 | None:intergenic | 50.0% | |
| GCTAGCAAGAGAGTCACAGA+AGG | - | chr3_1:77957879-77957898 | None:intergenic | 50.0% | |
| GCACCCATGCATCCATAAAC+TGG | - | chr3_1:77958642-77958661 | None:intergenic | 50.0% | |
| GCTCCCTTCTAATTCCTCTG+TGG | + | chr3_1:77958821-77958840 | Msa0377500:CDS | 50.0% | |
| GTTGTAGAAGGAAGAGGAGG+TGG | - | chr3_1:77958882-77958901 | None:intergenic | 50.0% | |
| GAGGTTGTAGAAGGAAGAGG+AGG | - | chr3_1:77958885-77958904 | None:intergenic | 50.0% | |
| GTAGAAGGAAGAGGAGGTGG+AGG | - | chr3_1:77958879-77958898 | None:intergenic | 55.0% | |
| GTAGAAGGAAGAGGAGGTGG+AGG | - | chr3_1:77958879-77958898 | None:intergenic | 55.0% | |
| GAAGGAAGAGGAGGTGGAGG+CGG | - | chr3_1:77958876-77958895 | None:intergenic | 60.0% | |
| GAAGGAAGAGGAGGTGGAGG+CGG | - | chr3_1:77958876-77958895 | None:intergenic | 60.0% | |
| GGAAGAGGAGGTGGAGGCGG+CGG | - | chr3_1:77958873-77958892 | None:intergenic | 70.0% | |
| GGAAGAGGAGGTGGAGGCGG+CGG | - | chr3_1:77958873-77958892 | None:intergenic | 70.0% | |
| AGAGGAGGTGGAGGCGGCGG+CGG | - | chr3_1:77958870-77958889 | None:intergenic | 75.0% | |
| AGAGGAGGTGGAGGCGGCGG+CGG | - | chr3_1:77958870-77958889 | None:intergenic | 75.0% | |
| ! | GGTGGAGGCGGCGGCGGTGG+CGG | - | chr3_1:77958864-77958883 | None:intergenic | 85.0% |
| ! | GGAGGTGGAGGCGGCGGCGG+TGG | - | chr3_1:77958867-77958886 | None:intergenic | 85.0% |
| ! | GGTGGAGGCGGCGGCGGTGG+CGG | - | chr3_1:77958864-77958883 | None:intergenic | 85.0% |
| ! | GGAGGTGGAGGCGGCGGCGG+TGG | - | chr3_1:77958867-77958886 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 77957872 | 77959184 | 77957872 | ID=Msa0377500;Name=Msa0377500 |
| chr3_1 | mRNA | 77957872 | 77959184 | 77957872 | ID=Msa0377500-mRNA-1;Parent=Msa0377500;Name=Msa0377500-mRNA-1;_AED=0.01;_eAED=0.01;_QI=105|1|1|1|1|1|3|192|234 |
| chr3_1 | exon | 77957872 | 77957990 | 77957872 | ID=Msa0377500-mRNA-1:exon:18667;Parent=Msa0377500-mRNA-1 |
| chr3_1 | exon | 77958216 | 77958480 | 77958216 | ID=Msa0377500-mRNA-1:exon:18668;Parent=Msa0377500-mRNA-1 |
| chr3_1 | exon | 77958567 | 77959184 | 77958567 | ID=Msa0377500-mRNA-1:exon:18669;Parent=Msa0377500-mRNA-1 |
| chr3_1 | five_prime_UTR | 77957872 | 77957976 | 77957872 | ID=Msa0377500-mRNA-1:five_prime_utr;Parent=Msa0377500-mRNA-1 |
| chr3_1 | CDS | 77957977 | 77957990 | 77957977 | ID=Msa0377500-mRNA-1:cds;Parent=Msa0377500-mRNA-1 |
| chr3_1 | CDS | 77958216 | 77958480 | 77958216 | ID=Msa0377500-mRNA-1:cds;Parent=Msa0377500-mRNA-1 |
| chr3_1 | CDS | 77958567 | 77958992 | 77958567 | ID=Msa0377500-mRNA-1:cds;Parent=Msa0377500-mRNA-1 |
| chr3_1 | three_prime_UTR | 77958993 | 77959184 | 77958993 | ID=Msa0377500-mRNA-1:three_prime_utr;Parent=Msa0377500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
