AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1156670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156670 MtrunA17_Chr7g0250331 83.057 785 117 4 25 800 32 809 0.0 1301
Msa1156670 MtrunA17_Chr7g0250391 83.676 778 102 3 25 800 31 785 0.0 1286
Msa1156670 MtrunA17_Chr7g0250371 80.977 778 124 2 25 800 32 787 0.0 1281
Msa1156670 MtrunA17_Chr7g0250411 77.308 780 148 4 25 800 32 786 0.0 1221
Msa1156670 MtrunA17_Chr7g0250481 71.122 793 189 5 25 800 31 800 0.0 1144
Msa1156670 MtrunA17_Chr7g0250461 74.841 473 95 2 25 495 32 482 0.0 715
Msa1156670 MtrunA17_Chr4g0057531 49.428 787 341 20 26 798 34 777 0.0 709
Msa1156670 MtrunA17_Chr3g0120521 48.535 785 347 19 26 798 31 770 0.0 700
Msa1156670 MtrunA17_Chr4g0057471 50.396 758 310 24 58 798 1 709 0.0 664
Msa1156670 MtrunA17_Chr4g0076611 49.600 750 300 22 69 797 1 693 0.0 650
Msa1156670 MtrunA17_Chr5g0439271 56.592 622 231 13 187 797 8 601 0.0 647
Msa1156670 MtrunA17_Chr4g0057481 48.821 721 310 20 91 798 16 690 0.0 612
Msa1156670 MtrunA17_Chr4g0057461 50.075 665 282 18 146 798 3 629 0.0 596
Msa1156670 MtrunA17_Chr4g0057511 49.163 657 283 19 150 798 3 616 0.0 560
Msa1156670 MtrunA17_Chr4g0057491 47.662 663 294 19 146 798 3 622 0.0 553
Msa1156670 MtrunA17_Chr5g0423261 47.076 667 294 19 145 798 2 622 0.0 549
Msa1156670 MtrunA17_Chr4g0053781 40.657 792 399 24 18 797 22 754 6.35e-170 509
Msa1156670 MtrunA17_Chr4g0026641 40.329 791 390 22 26 798 28 754 1.09e-167 503
Msa1156670 MtrunA17_Chr7g0250441 84.561 285 44 0 516 800 1 285 3.00e-167 485
Msa1156670 MtrunA17_Chr8g0369891 40.409 782 394 24 26 798 35 753 1.78e-166 500
Msa1156670 MtrunA17_Chr1g0204321 39.678 746 389 22 66 797 78 776 2.30e-166 500
Msa1156670 MtrunA17_Chr4g0020651 40.000 770 398 21 44 800 41 759 9.63e-164 493
Msa1156670 MtrunA17_Chr5g0401511 39.589 778 390 21 44 800 45 763 6.73e-163 491
Msa1156670 MtrunA17_Chr4g0037221 38.882 769 370 22 69 799 63 769 7.56e-163 491
Msa1156670 MtrunA17_Chr5g0407701 40.996 783 391 26 26 798 29 750 1.12e-162 490
Msa1156670 MtrunA17_Chr1g0152771 39.484 775 384 23 49 795 43 760 2.22e-161 487
Msa1156670 MtrunA17_Chr8g0377961 38.625 800 396 22 26 798 44 775 4.00e-161 487
Msa1156670 MtrunA17_Chr2g0300751 40.106 758 371 23 63 795 71 770 6.24e-161 486
Msa1156670 MtrunA17_Chr8g0351011 39.949 781 385 24 26 797 46 751 1.39e-159 482
Msa1156670 MtrunA17_Chr7g0246451 38.232 803 393 21 15 799 30 747 7.05e-159 480
Msa1156670 MtrunA17_Chr7g0262161 39.500 800 402 25 20 797 21 760 1.98e-156 474
Msa1156670 MtrunA17_Chr8g0354771 38.910 789 416 21 26 798 26 764 3.03e-156 474
Msa1156670 MtrunA17_Chr2g0285111 37.808 812 408 24 26 797 31 785 6.95e-156 474
Msa1156670 MtrunA17_Chr2g0285121 38.528 815 398 28 26 797 28 782 1.58e-155 473
Msa1156670 MtrunA17_Chr3g0136151 39.290 789 397 25 26 797 38 761 4.54e-155 471
Msa1156670 MtrunA17_Chr8g0334521 37.265 797 402 26 12 799 28 735 5.06e-153 464
Msa1156670 MtrunA17_Chr3g0143251 38.987 790 402 27 26 797 37 764 2.48e-151 461
Msa1156670 MtrunA17_Chr1g0170081 37.733 803 388 27 12 798 25 731 2.16e-149 455
Msa1156670 MtrunA17_Chr8g0345971 38.830 752 388 20 55 797 70 758 1.54e-148 454
Msa1156670 MtrunA17_Chr1g0189251 38.523 745 374 23 69 797 77 753 5.20e-148 452
Msa1156670 MtrunA17_Chr7g0227991 37.469 798 402 26 12 800 27 736 8.75e-147 448
Msa1156670 MtrunA17_Chr7g0266051 37.533 762 398 18 46 797 12 705 9.58e-147 447
Msa1156670 MtrunA17_Chr3g0134621 38.714 793 369 25 26 795 35 733 1.05e-146 448
Msa1156670 MtrunA17_Chr8g0345991 39.125 754 365 24 69 797 69 753 2.21e-146 448
Msa1156670 MtrunA17_Chr8g0344331 37.664 762 382 22 69 798 75 775 7.41e-146 447
Msa1156670 MtrunA17_Chr4g0070391 39.119 749 377 22 69 795 58 749 2.35e-145 445
Msa1156670 MtrunA17_Chr1g0146251 38.500 800 390 28 12 798 25 735 4.21e-145 444
Msa1156670 MtrunA17_Chr6g0470851 37.594 798 396 31 13 799 25 731 9.68e-145 443
Msa1156670 MtrunA17_Chr8g0345981 37.748 755 376 22 69 797 71 757 7.68e-143 439
Msa1156670 MtrunA17_Chr1g0146271 37.953 801 395 29 10 798 23 733 9.24e-143 438
Msa1156670 MtrunA17_Chr2g0303881 39.973 743 374 18 69 797 41 725 1.37e-141 435
Msa1156670 MtrunA17_Chr8g0344971 38.064 754 383 24 69 797 65 759 2.52e-141 435
Msa1156670 MtrunA17_Chr6g0470881 37.420 783 393 25 26 799 37 731 4.30e-141 433
Msa1156670 MtrunA17_Chr8g0334491 35.955 801 378 29 26 798 35 728 4.48e-138 426
Msa1156670 MtrunA17_Chr8g0354741 40.419 668 335 20 140 798 21 634 5.51e-137 420
Msa1156670 MtrunA17_Chr7g0246461 38.514 740 364 24 69 797 80 739 2.92e-136 421
Msa1156670 MtrunA17_Chr8g0345961 37.451 761 373 22 69 797 67 756 8.08e-136 421
Msa1156670 MtrunA17_Chr3g0079971 35.383 797 416 26 13 798 24 732 2.68e-135 419
Msa1156670 MtrunA17_Chr4g0057061 37.677 775 393 28 38 797 75 774 5.10e-134 416
Msa1156670 MtrunA17_Chr1g0189561 36.085 751 397 23 67 797 73 760 9.13e-131 407
Msa1156670 MtrunA17_Chr5g0447171 43.761 553 215 15 299 800 3 510 9.80e-129 394
Msa1156670 MtrunA17_Chr8g0376841 40.264 606 285 16 26 620 42 581 2.69e-128 395
Msa1156670 MtrunA17_Chr5g0398401 36.041 788 421 24 23 800 42 756 8.52e-124 389
Msa1156670 MtrunA17_Chr5g0398241 36.306 785 417 25 23 797 42 753 8.79e-124 389
Msa1156670 MtrunA17_Chr5g0398331 35.448 804 422 28 9 797 29 750 1.44e-118 375
Msa1156670 MtrunA17_Chr5g0398311 36.122 789 411 26 21 797 39 746 3.90e-116 369
Msa1156670 MtrunA17_Chr5g0398351 36.030 791 417 28 23 800 793 1507 6.55e-114 378
Msa1156670 MtrunA17_Chr5g0398351 35.145 791 423 26 23 800 23 736 3.31e-111 370
Msa1156670 MtrunA17_Chr7g0248861 35.596 604 321 13 65 658 77 622 5.23e-105 342
Msa1156670 MtrunA17_Chr7g0248861 44.628 242 120 7 129 367 629 859 9.57e-49 185
Msa1156670 MtrunA17_Chr3g0103061 65.417 240 71 3 26 261 29 260 1.78e-104 322
Msa1156670 MtrunA17_Chr2g0301011 35.953 598 254 20 98 686 4 481 7.93e-95 305
Msa1156670 MtrunA17_Chr7g0261701 58.974 273 104 7 526 797 24 289 3.48e-94 296
Msa1156670 MtrunA17_Chr4g0071871 32.617 791 439 27 52 798 74 814 1.19e-91 305
Msa1156670 MtrunA17_Chr2g0298601 33.456 816 421 38 40 795 58 811 9.97e-91 303
Msa1156670 MtrunA17_Chr3g0143241 44.332 397 195 12 26 418 37 411 3.25e-89 292
Msa1156670 MtrunA17_Chr7g0261691 44.505 364 150 11 134 485 5 328 2.25e-86 278
Msa1156670 MtrunA17_Chr8g0380961 31.218 788 463 25 51 800 102 848 8.60e-79 271
Msa1156670 MtrunA17_Chr2g0302951 32.412 796 450 32 48 800 91 841 2.75e-78 270
Msa1156670 MtrunA17_Chr6g0480721 45.425 306 142 8 69 370 5 289 5.11e-76 259
Msa1156670 MtrunA17_Chr6g0480721 41.367 278 140 9 528 797 337 599 1.73e-48 182
Msa1156670 MtrunA17_Chr5g0439281 63.690 168 57 2 26 189 30 197 3.16e-69 226
Msa1156670 MtrunA17_Chr4g0075331 28.788 792 460 28 54 797 2 737 7.06e-67 236
Msa1156670 MtrunA17_Chr4g0026651 42.587 317 133 9 83 365 1 302 7.45e-66 222
Msa1156670 MtrunA17_Chr7g0248871 38.978 313 177 7 60 371 70 369 7.71e-65 231
Msa1156670 MtrunA17_Chr7g0248871 43.706 286 150 8 520 797 481 763 1.29e-56 207
Msa1156670 MtrunA17_Chr7g0276151 41.667 324 170 8 49 371 63 368 1.82e-64 230
Msa1156670 MtrunA17_Chr7g0276151 45.215 303 152 8 506 797 456 755 1.00e-59 216
Msa1156670 MtrunA17_Chr3g0103071 43.887 319 139 10 273 587 1 283 5.57e-64 216
Msa1156670 MtrunA17_Chr3g0097061 36.641 393 202 12 98 488 4 351 7.25e-61 212
Msa1156670 MtrunA17_Chr3g0097061 46.729 107 49 2 581 687 332 430 3.40e-23 103
Msa1156670 MtrunA17_Chr3g0105461 42.105 342 141 9 26 366 36 321 6.12e-60 207
Msa1156670 MtrunA17_Chr8g0346361 42.857 287 146 9 520 799 223 498 5.09e-58 206
Msa1156670 MtrunA17_Chr8g0346361 43.882 237 105 7 159 394 4 213 3.03e-50 184
Msa1156670 MtrunA17_Chr3g0105451 42.657 286 139 9 521 797 9 278 1.07e-57 198
Msa1156670 MtrunA17_Chr2g0301031 43.411 258 129 8 547 798 1 247 4.67e-54 187
Msa1156670 MtrunA17_Chr4g0026661 43.137 255 136 7 547 798 12 260 6.80e-54 187
Msa1156670 MtrunA17_Chr5g0447151 66.400 125 39 1 26 147 31 155 4.25e-53 181
Msa1156670 MtrunA17_Chr2g0312861 42.857 259 131 8 547 799 1 248 2.03e-51 182
Msa1156670 MtrunA17_Chr4g0057501 62.205 127 44 2 24 147 5 130 1.90e-48 167
Msa1156670 MtrunA17_Chr2g0301911 32.832 399 197 15 157 550 28 360 2.59e-45 167
Msa1156670 MtrunA17_Chr2g0312841 46.939 196 82 5 159 354 9 182 4.88e-45 160
Msa1156670 MtrunA17_Chr2g0301921 41.204 216 111 7 589 798 1 206 6.84e-40 146
Msa1156670 MtrunA17_Chr5g0436021 46.707 167 78 4 188 354 31 186 7.54e-40 145
Msa1156670 MtrunA17_Chr3g0103081 49.655 145 69 4 656 798 1 143 1.43e-38 140
Msa1156670 MtrunA17_Chr4g0035881 50.000 140 67 2 223 362 4 140 3.25e-33 130
Msa1156670 MtrunA17_Chr4g0035881 50.000 110 52 1 514 620 208 317 1.82e-26 111
Msa1156670 MtrunA17_Chr5g0418921 51.111 135 64 2 516 649 1 134 9.62e-32 122
Msa1156670 MtrunA17_Chr4g0071191 38.043 184 95 5 528 706 57 226 7.62e-29 115
Msa1156670 MtrunA17_Chr3g0142981 41.401 157 63 2 209 365 45 172 2.30e-27 110
Msa1156670 MtrunA17_Chr4g0057521 60.465 86 30 2 63 145 13 97 1.50e-26 106
Msa1156670 MtrunA17_Chr4g0035871 42.759 145 79 2 43 187 10 150 5.68e-25 101
Msa1156670 MtrunA17_Chr7g0261681 56.790 81 32 1 69 146 1 81 1.22e-24 99.0
Msa1156670 MtrunA17_Chr2g0301021 26.139 417 181 16 12 418 25 324 1.93e-24 106
Msa1156670 MtrunA17_Chr8g0376851 40.491 163 87 6 643 797 11 171 7.75e-24 99.4
Msa1156670 MtrunA17_Chr3g0143021 43.363 113 59 4 66 178 4 111 6.53e-22 91.7
Msa1156670 MtrunA17_Chr5g0436031 37.576 165 92 7 640 797 20 180 2.02e-21 93.6
Msa1156670 MtrunA17_Chr3g0143231 51.648 91 42 2 530 620 1 89 4.60e-21 88.2
Msa1156670 MtrunA17_Chr8g0346351 36.000 150 81 5 11 159 24 159 1.77e-20 89.4
Msa1156670 MtrunA17_Chr3g0142971 48.276 87 43 2 530 616 1 85 5.61e-18 79.3
Msa1156670 MtrunA17_Chr8g0354731 41.818 110 56 2 9 118 40 141 1.48e-17 80.9
Msa1156670 MtrunA17_Chr3g0142961 40.000 125 66 5 640 755 13 137 2.43e-17 79.3
Msa1156670 MtrunA17_Chr7g0248851 39.610 154 73 9 656 797 1 146 1.28e-16 77.8
Msa1156670 MtrunA17_Chr5g0398341 45.556 90 48 1 589 678 1 89 1.11e-13 67.8
Msa1156670 MtrunA17_Chr3g0077671 48.649 74 37 1 578 650 235 308 1.42e-13 72.4
Msa1156670 MtrunA17_Chr2g0312831 38.947 95 51 3 26 120 37 124 2.24e-12 65.1
Msa1156670 MtrunA17_Chr2g0301901 35.780 109 61 4 12 120 25 124 2.66e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156670 AT5G59810.1 50.064 785 329 18 26 798 42 775 0.0 718
Msa1156670 AT2G04160.1 49.937 795 339 19 15 798 25 771 0.0 712
Msa1156670 AT5G67360.1 41.795 780 391 22 26 798 32 755 0.0 543
Msa1156670 AT5G45650.2 38.415 820 399 21 26 797 27 788 7.19e-172 515
Msa1156670 AT5G45650.1 38.415 820 399 21 26 797 27 788 7.19e-172 515
Msa1156670 AT2G05920.1 40.523 765 374 21 50 795 45 747 2.07e-166 500
Msa1156670 AT1G32940.1 39.646 792 405 22 26 800 30 765 5.62e-164 494
Msa1156670 AT4G10520.1 38.354 790 402 20 25 800 29 747 1.42e-162 490
Msa1156670 AT4G10550.1 38.685 791 413 21 26 800 35 769 1.77e-161 488
Msa1156670 AT4G10550.3 38.685 791 413 21 26 800 51 785 2.40e-161 488
Msa1156670 AT3G14240.1 39.581 763 374 22 68 797 61 769 6.25e-161 486
Msa1156670 AT3G14067.1 38.184 804 406 27 22 798 29 768 1.25e-159 483
Msa1156670 AT1G32940.4 39.791 764 393 21 54 800 1 714 5.65e-159 480
Msa1156670 AT1G32940.2 39.791 764 393 21 54 800 1 714 5.65e-159 480
Msa1156670 AT1G32960.1 37.374 792 423 20 26 800 33 768 1.88e-158 480
Msa1156670 AT4G10550.4 38.663 763 402 20 54 800 1 713 1.64e-156 473
Msa1156670 AT4G10550.2 38.663 763 402 20 54 800 1 713 1.64e-156 473
Msa1156670 AT5G11940.1 38.804 786 404 20 25 800 37 755 2.91e-156 474
Msa1156670 AT5G51750.1 38.247 787 422 23 26 797 37 774 3.64e-156 474
Msa1156670 AT4G10510.1 38.209 793 419 21 23 800 20 756 1.90e-154 469
Msa1156670 AT4G10510.3 38.354 790 416 21 26 800 35 768 4.95e-154 469
Msa1156670 AT5G03620.1 39.174 799 388 25 26 799 35 760 1.22e-153 468
Msa1156670 AT4G10530.1 37.262 789 403 20 25 800 29 738 1.86e-153 466
Msa1156670 AT4G34980.1 39.085 765 387 26 61 799 49 760 2.01e-153 467
Msa1156670 AT1G20160.2 39.893 747 385 22 69 800 28 725 4.89e-153 465
Msa1156670 AT1G20160.1 39.893 747 385 22 69 800 67 764 1.46e-152 465
Msa1156670 AT4G00230.1 39.201 801 385 26 14 797 28 743 1.66e-152 464
Msa1156670 AT1G66210.1 38.119 787 401 26 26 800 41 753 8.83e-152 462
Msa1156670 AT4G21630.1 37.139 797 397 19 25 798 39 754 7.43e-151 460
Msa1156670 AT5G59190.1 39.394 759 363 20 49 795 13 686 2.38e-150 456
Msa1156670 AT4G10540.1 37.136 789 429 19 26 800 31 766 4.20e-150 459
Msa1156670 AT1G32950.1 37.817 788 424 20 26 800 30 764 1.72e-149 457
Msa1156670 AT4G10510.4 38.320 762 405 20 54 800 1 712 5.12e-149 454
Msa1156670 AT1G04110.1 40.080 751 383 23 69 800 71 773 8.61e-148 452
Msa1156670 AT3G46850.1 39.052 781 387 24 26 797 34 734 3.22e-147 450
Msa1156670 AT5G59120.1 38.825 783 381 26 26 797 32 727 3.87e-147 449
Msa1156670 AT1G66220.1 37.962 785 402 27 26 800 38 747 1.03e-145 446
Msa1156670 AT5G59090.2 38.665 794 362 28 26 797 33 723 1.09e-145 446
Msa1156670 AT5G59090.1 38.665 794 367 28 26 797 33 728 1.10e-145 446
Msa1156670 AT1G20150.1 36.546 799 425 24 26 800 33 773 2.30e-145 446
Msa1156670 AT5G59100.1 39.591 783 382 26 26 797 35 737 3.35e-145 445
Msa1156670 AT1G32950.2 37.895 760 412 19 54 800 1 713 1.05e-144 443
Msa1156670 AT5G59090.3 38.665 794 365 29 26 797 33 726 1.09e-144 443
Msa1156670 AT3G46840.1 39.103 780 387 25 26 797 35 734 6.89e-144 441
Msa1156670 AT4G10510.2 38.019 747 398 20 69 800 1 697 1.00e-143 440
Msa1156670 AT5G59130.4 38.570 783 377 24 26 797 36 725 3.36e-141 434
Msa1156670 AT5G59130.3 38.551 773 376 23 36 797 2 686 6.00e-140 430
Msa1156670 AT5G59130.1 38.570 783 373 25 26 797 36 721 7.44e-140 431
Msa1156670 AT5G45640.1 36.748 781 367 24 77 797 38 751 4.76e-138 427
Msa1156670 AT1G01900.1 38.349 751 383 23 69 797 79 771 8.52e-137 424
Msa1156670 AT1G32940.3 40.426 611 296 18 26 622 30 586 2.84e-125 389
Msa1156670 AT5G03620.2 40.464 603 289 15 26 620 35 575 1.09e-124 386
Msa1156670 AT4G21326.1 33.952 754 423 17 54 798 1 688 6.17e-124 388
Msa1156670 AT4G15040.2 35.623 786 380 26 36 797 2 685 9.08e-120 377
Msa1156670 AT4G15040.1 35.623 786 380 26 36 797 2 685 9.08e-120 377
Msa1156670 AT1G32970.1 34.387 791 413 24 26 800 25 725 1.57e-119 378
Msa1156670 AT5G67090.1 34.354 751 375 24 64 786 55 715 5.58e-116 368
Msa1156670 AT4G00230.2 38.350 618 301 17 14 624 28 572 5.34e-114 359
Msa1156670 AT2G39850.1 31.675 824 423 32 26 797 30 765 1.62e-94 313
Msa1156670 AT2G19170.1 31.762 806 449 34 40 795 54 808 3.22e-89 299
Msa1156670 AT2G19170.2 31.762 806 449 34 40 795 54 808 3.22e-89 299
Msa1156670 AT4G21650.1 42.935 368 177 9 26 371 42 398 3.03e-86 290
Msa1156670 AT4G21650.1 40.278 288 160 5 514 798 483 761 4.41e-53 197
Msa1156670 AT4G21640.1 43.869 367 175 9 14 362 30 383 8.15e-86 288
Msa1156670 AT4G21640.1 42.708 288 153 5 514 798 450 728 6.27e-56 205
Msa1156670 AT1G20160.3 38.272 486 250 14 69 548 67 508 5.87e-85 281
Msa1156670 AT4G30020.3 30.835 814 453 30 43 800 57 816 2.17e-84 286
Msa1156670 AT4G30020.1 30.835 814 453 30 43 800 57 816 2.17e-84 286
Msa1156670 AT4G30020.4 30.835 814 453 30 43 800 57 816 2.17e-84 286
Msa1156670 AT4G30020.2 30.835 814 453 30 43 800 57 816 2.17e-84 286
Msa1156670 AT4G20430.3 31.039 799 454 32 50 800 102 851 1.30e-83 285
Msa1156670 AT4G20430.1 31.039 799 454 32 50 800 102 851 1.30e-83 285
Msa1156670 AT4G20430.2 30.750 800 431 34 50 800 102 827 9.93e-80 274
Msa1156670 AT5G58840.2 43.931 346 160 9 26 370 35 347 2.24e-79 264
Msa1156670 AT1G30600.1 30.952 798 453 30 51 800 82 829 5.41e-79 272
Msa1156670 AT5G59130.2 41.814 397 193 11 26 420 36 396 5.96e-79 269
Msa1156670 AT5G59130.2 43.321 277 137 7 528 797 452 715 4.55e-51 191
Msa1156670 AT5G58840.3 43.931 346 160 9 26 370 35 347 1.01e-78 264
Msa1156670 AT5G58840.3 43.114 167 78 4 469 620 367 531 3.82e-27 117
Msa1156670 AT5G58830.1 44.092 347 157 10 26 370 34 345 8.47e-78 266
Msa1156670 AT5G58830.1 41.071 280 142 8 528 797 439 705 1.85e-51 192
Msa1156670 AT5G58840.1 43.931 346 160 9 26 370 35 347 3.44e-77 264
Msa1156670 AT5G58840.1 39.886 351 178 11 469 797 367 706 5.92e-59 214
Msa1156670 AT5G44530.1 30.663 799 467 32 44 800 83 836 6.57e-77 266
Msa1156670 AT1G62340.1 30.075 798 459 31 51 798 82 830 3.07e-75 261
Msa1156670 AT5G58820.1 43.931 346 159 10 26 370 30 341 7.22e-75 258
Msa1156670 AT5G58820.1 39.216 357 175 13 467 797 360 700 8.44e-53 196
Msa1156670 AT4G26330.2 44.375 320 163 9 61 370 13 327 1.61e-73 254
Msa1156670 AT4G26330.2 43.581 296 156 7 510 797 429 721 1.26e-64 230
Msa1156670 AT5G44530.2 29.854 824 466 33 44 800 83 861 4.61e-73 256
Msa1156670 AT4G21323.1 38.557 402 214 11 4 386 48 435 6.35e-73 254
Msa1156670 AT4G21323.1 40.604 298 159 9 509 800 511 796 1.21e-49 188
Msa1156670 AT4G26330.1 42.515 334 163 10 61 370 13 341 7.77e-70 245
Msa1156670 AT4G26330.1 43.581 296 156 7 510 797 443 735 1.68e-64 230
Msa1156670 AT5G44530.3 28.646 576 337 22 44 581 83 622 5.74e-47 177
Msa1156670 AT1G32980.1 45.455 187 98 4 585 768 3 188 3.66e-40 146
Msa1156670 AT5G59110.1 39.506 162 87 7 645 797 7 166 1.10e-21 93.2

Find 164 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACATTTAAACCAATATT+TGG 0.166325 7_4:+45096834 None:intergenic
TTGAACTTCTTATGTGCTTC+TGG 0.222659 7_4:-45096957 Msa1156670:CDS
TCCATTGCAGTTCTCCAAAT+TGG 0.226476 7_4:+45096634 None:intergenic
ATCTTCTCATTATGATTTAC+TGG 0.226804 7_4:-45102061 Msa1156670:CDS
ATGTCTTGCCCTCATGTTGC+TGG 0.236468 7_4:-45097894 Msa1156670:CDS
GTACCAGGTGCAAGCATATT+TGG 0.243200 7_4:-45099696 Msa1156670:CDS
TGTTTATGACCTAGGGATTA+AGG 0.261675 7_4:-45096985 Msa1156670:CDS
TCAATCACATTACCAAATAT+TGG 0.277548 7_4:-45096846 Msa1156670:CDS
ACACGTTCTTGGGAATTTCT+TGG 0.280926 7_4:-45101661 Msa1156670:CDS
ACTGCAAATCCATTTGCTTA+TGG 0.284883 7_4:-45097050 Msa1156670:CDS
AGTATTCTCCCATTGATTCT+TGG 0.286557 7_4:+45098539 None:intergenic
TCAAAACACTTCATCTGAAT+TGG 0.287435 7_4:-45097857 Msa1156670:CDS
GCTTCTGATGATGCAGCTTC+TGG 0.287449 7_4:-45102591 Msa1156670:CDS
AATCCATTTGCTTATGGTTC+AGG 0.301567 7_4:-45097044 Msa1156670:CDS
TCCTTGAATTTCAAGAAAAT+AGG 0.302304 7_4:-45096717 Msa1156670:CDS
CCTTGTTTGCATTAGGTGTT+TGG 0.315876 7_4:-45100280 Msa1156670:intron
AAACAAACCAGGAAGCTAAT+TGG 0.317783 7_4:-45099840 Msa1156670:intron
AACTGCACACTACACGTTCT+TGG 0.318962 7_4:-45101672 Msa1156670:CDS
TTGAGACCAACACACTTTGT+AGG 0.320968 7_4:+45099623 None:intergenic
TGATTTACTGGGTTCAATCT+TGG 0.321841 7_4:-45102049 Msa1156670:CDS
TATAACACCTTTAGTATTGA+TGG 0.332691 7_4:+45098155 None:intergenic
ACCCTGAGCAACTGAACTTA+TGG 0.333650 7_4:+45098610 None:intergenic
CATTTGCGTTGAACAGTAAT+GGG 0.333841 7_4:+45096585 None:intergenic
AACATGACATTTACTTGTTC+AGG 0.339929 7_4:-45096900 Msa1156670:CDS
CCTCATGTTGCTGGGACTGC+TGG 0.348087 7_4:-45097885 Msa1156670:CDS
TTGAAGGATATGATTTCAAT+AGG 0.352218 7_4:-45099483 Msa1156670:CDS
TTAGAAGGATCAAGTGTTCC+TGG 0.357840 7_4:+45098953 None:intergenic
CCAAGGGGAAAATACCAATT+TGG 0.360143 7_4:-45096648 Msa1156670:CDS
TTCCATAAGTTCAGTTGCTC+AGG 0.365406 7_4:-45098612 Msa1156670:CDS
GTTCCTTGCATTACATTGAA+TGG 0.365594 7_4:+45097921 None:intergenic
TTGACATCTGGAGTATTGTT+TGG 0.373851 7_4:-45098875 Msa1156670:intron
TCCTGGGTCCATTGCACTGT+TGG 0.382552 7_4:+45097010 None:intergenic
ATTGGCAATGGTACTGTAAA+AGG 0.384831 7_4:-45099672 Msa1156670:CDS
TCGCTAAAACTCTTCGATTC+CGG 0.389481 7_4:+45100257 None:intergenic
GCAACATTAGTAACACTTCC+AGG 0.398380 7_4:+45099396 None:intergenic
GATGAGTATGAAGCCATAAC+TGG 0.406220 7_4:+45098200 None:intergenic
TAGGCCCAATTCCAGCAAAA+TGG 0.407319 7_4:-45100226 Msa1156670:CDS
CAAAGAAACTTCCATGCAAC+AGG 0.408441 7_4:-45100163 Msa1156670:intron
GATTTACTGGGTTCAATCTT+GGG 0.410597 7_4:-45102048 Msa1156670:CDS
CAAACAGCACGTGACTTTGT+AGG 0.414204 7_4:-45099759 Msa1156670:CDS
GCTTGGCAAAAGGGAAGGTT+TGG 0.418165 7_4:-45101613 Msa1156670:CDS
AGAAATCAACCAAGAATCAA+TGG 0.418991 7_4:-45098548 Msa1156670:CDS
ACAGTGTTACATTGTATACT+TGG 0.419702 7_4:-45102136 Msa1156670:intron
ACTTCGAACACTTTGACATC+TGG 0.421448 7_4:-45098887 Msa1156670:CDS
TTCCTTGCATTACATTGAAT+GGG 0.423057 7_4:+45097922 None:intergenic
GATATAATCTCACTTTCTCT+TGG 0.429787 7_4:-45099537 Msa1156670:CDS
TAGGTTGCAACTCTAGCTCT+TGG 0.432129 7_4:+45099642 None:intergenic
ACTGCACACTACACGTTCTT+GGG 0.432676 7_4:-45101671 Msa1156670:CDS
TGAATCGATGTTAGCTATGA+TGG 0.434283 7_4:+45101582 None:intergenic
TATATCAACACCATCACTAA+TGG 0.435155 7_4:+45099554 None:intergenic
TCATTTGCGTTGAACAGTAA+TGG 0.436775 7_4:+45096584 None:intergenic
TGCATCACTTATAGGCTTGT+TGG 0.444955 7_4:+45097085 None:intergenic
GGTGCAAGCATATTTGGTAT+TGG 0.445201 7_4:-45099690 Msa1156670:CDS
TTCTTGAAATTCAAGGAACT+TGG 0.447012 7_4:+45096723 None:intergenic
TTTGCAAAAGTCCAATTGCC+TGG 0.448086 7_4:-45096765 Msa1156670:CDS
CCTGGGTCCATTGCACTGTT+GGG 0.454525 7_4:+45097011 None:intergenic
AAGAACACAGATACCACCTT+TGG 0.455443 7_4:+45101709 None:intergenic
ATCATAGCTAACATCGATTC+AGG 0.456627 7_4:-45101580 Msa1156670:intron
CCTAGGTCATAAACAAGTCC+TGG 0.461631 7_4:+45096993 None:intergenic
TAAGTGCTGAAATGAGTTGT+TGG 0.464449 7_4:+45096928 None:intergenic
TCATATAATAAACAGATCAA+TGG 0.465118 7_4:-45101894 Msa1156670:CDS
GAGAAGATGTAGCAGTTTCA+AGG 0.469008 7_4:+45102076 None:intergenic
ACACCGGGCGCCGTTACATC+AGG 0.469665 7_4:+45098014 None:intergenic
TCAGGGTCAAGAAGCTAAAT+CGG 0.471069 7_4:-45098594 Msa1156670:CDS
ATATTTGGTAATGTGATTGA+AGG 0.474775 7_4:+45096849 None:intergenic
CAGCCTGATGTAACGGCGCC+CGG 0.476551 7_4:-45098017 Msa1156670:CDS
TGCACTTGCAAACAATGAAT+AGG 0.477779 7_4:+45097977 None:intergenic
TATCAACTCAGCTTGGCAAA+AGG 0.479025 7_4:-45101623 Msa1156670:CDS
CCAGGACTTGTTTATGACCT+AGG 0.481515 7_4:-45096993 Msa1156670:CDS
CTCGTATAGTCACCAATGTT+GGG 0.482371 7_4:-45096803 Msa1156670:CDS
GGAGAACTGCAATGGACAAA+TGG 0.483947 7_4:-45096627 Msa1156670:CDS
AAGAAAGCCAGCTCCAGTTA+TGG 0.487825 7_4:-45098213 Msa1156670:CDS
AGCTAAATCGGCAAGAGCAA+AGG 0.489923 7_4:-45098582 Msa1156670:CDS
CGTGCTGTTTGTTGCGAACG+AGG 0.491310 7_4:+45099771 None:intergenic
GCTAAATCGGCAAGAGCAAA+GGG 0.491366 7_4:-45098581 Msa1156670:CDS
TGTCCTGAACCATAAGCAAA+TGG 0.492197 7_4:+45097041 None:intergenic
ATCAACTCAGCTTGGCAAAA+GGG 0.493211 7_4:-45101622 Msa1156670:CDS
GTTGCATCTGCTGGAAATGA+TGG 0.500160 7_4:-45099426 Msa1156670:CDS
TGTTACTAATGTTGCTCCAT+GGG 0.500288 7_4:-45099388 Msa1156670:CDS
CAGGACTTGTTTATGACCTA+GGG 0.508407 7_4:-45096992 Msa1156670:CDS
TAACCAGTCTTTCACTCTAG+TGG 0.508663 7_4:-45099155 Msa1156670:CDS
TGTCTTGCCCTCATGTTGCT+GGG 0.508905 7_4:-45097893 Msa1156670:CDS
TTCAGCAGTATTATGACCAT+TGG 0.511561 7_4:-45099330 Msa1156670:CDS
GTGTTACTAATGTTGCTCCA+TGG 0.513688 7_4:-45099389 Msa1156670:CDS
AGCAGTTTCAAGGTCAATAG+AGG 0.514083 7_4:+45102086 None:intergenic
CGCATCTCGATTTGTCACAT+TGG 0.514200 7_4:+45099111 None:intergenic
TTTGCAAAATATGTACTTGG+TGG 0.517980 7_4:+45096780 None:intergenic
TTAACAAGAGGACATAGTAT+AGG 0.518469 7_4:-45098464 Msa1156670:CDS
GAAATCAACCAAGAATCAAT+GGG 0.518554 7_4:-45098547 Msa1156670:CDS
CAAATGGAAAGCATATTGTA+AGG 0.521262 7_4:-45096611 Msa1156670:CDS
TTCAAGGTCAATAGAGGAAG+GGG 0.521481 7_4:+45102092 None:intergenic
TATGAAGCCATAACTGGAGC+TGG 0.522115 7_4:+45098206 None:intergenic
TCAAGTAATCCTTAATCCCT+AGG 0.522854 7_4:+45096976 None:intergenic
TTTGTTTCAGCCTGATGTAA+CGG 0.526895 7_4:-45098024 Msa1156670:intron
ACTCGTATAGTCACCAATGT+TGG 0.529854 7_4:-45096804 Msa1156670:CDS
TAAATATTCAACCTGTTGCA+TGG 0.530300 7_4:+45100152 None:intergenic
AGCATATTTGGTATTGGCAA+TGG 0.531485 7_4:-45099684 Msa1156670:CDS
CTTGTTGGTGTTATCTCTTG+TGG 0.532291 7_4:+45097100 None:intergenic
CAATTCCAGCAAAATGGCGT+GGG 0.534400 7_4:-45100220 Msa1156670:CDS
ACTAGAGTGAAAGACTGGTT+AGG 0.537957 7_4:+45099157 None:intergenic
TACTGGGTTCAATCTTGGGA+AGG 0.541104 7_4:-45102044 Msa1156670:intron
GTTTGCATTAGGTGTTTGGC+CGG 0.542398 7_4:-45100276 Msa1156670:intron
CAGTGTTACATTGTATACTT+GGG 0.543630 7_4:-45102135 Msa1156670:CDS
TTCCCATTCAATGTAATGCA+AGG 0.545135 7_4:-45097924 Msa1156670:CDS
AAAGCATATGAACGTGATAA+CGG 0.548391 7_4:-45099801 Msa1156670:CDS
ACCAATTTGGAGAACTGCAA+TGG 0.549150 7_4:-45096635 Msa1156670:CDS
AATTCAGCCATCAATACTAA+AGG 0.549273 7_4:-45098162 Msa1156670:intron
TCTTCTCATTATGATTTACT+GGG 0.550509 7_4:-45102060 Msa1156670:CDS
AAGCAACAAGTGTGACTCCA+AGG 0.551446 7_4:-45096665 Msa1156670:CDS
TTAGTAACACTTCCAGGGGT+TGG 0.551643 7_4:+45099402 None:intergenic
CTTGATCCTTCTAAAGCAAG+TGG 0.551880 7_4:-45098944 Msa1156670:CDS
GGAAATGATGGACCAACCCC+TGG 0.555158 7_4:-45099414 Msa1156670:CDS
CAACATTAGTAACACTTCCA+GGG 0.558988 7_4:+45099397 None:intergenic
TTTCACTCTAGTGGATTCTA+CGG 0.562821 7_4:-45099146 Msa1156670:CDS
GTTTCAAGGTCAATAGAGGA+AGG 0.562899 7_4:+45102090 None:intergenic
GCATGTGGAAACTTCGTACC+AGG 0.563077 7_4:-45099711 Msa1156670:CDS
AATCCACTAGAGTGAAAGAC+TGG 0.563936 7_4:+45099152 None:intergenic
TAGTGGCGTGTGTTCGAGAA+GGG 0.565122 7_4:-45098916 Msa1156670:CDS
ATTGATGGCTGAATTTCACT+TGG 0.567441 7_4:+45098170 None:intergenic
ACTCAGCTTGGCAAAAGGGA+AGG 0.568546 7_4:-45101618 Msa1156670:CDS
TGGCAAGTTTACAAATAGAC+TGG 0.568946 7_4:+45099180 None:intergenic
TCCATAAGTTCAGTTGCTCA+GGG 0.569952 7_4:-45098611 Msa1156670:CDS
CCAATTCCAGCAAAATGGCG+TGG 0.570080 7_4:-45100221 Msa1156670:CDS
CAAATGATATCAACTCAGCT+TGG 0.575551 7_4:-45101630 Msa1156670:CDS
ATAGCTGATTTAATAGCCGC+AGG 0.576830 7_4:+45097831 None:intergenic
CTAGGTCATAAACAAGTCCT+GGG 0.579565 7_4:+45096994 None:intergenic
AGCAACAAGTGTGACTCCAA+GGG 0.583540 7_4:-45096664 Msa1156670:CDS
GACAAGCATCAATTAACAAG+AGG 0.583591 7_4:-45098476 Msa1156670:CDS
TGTCAAATTAACAAACTCAA+AGG 0.583636 7_4:-45100188 Msa1156670:CDS
ATAGTGGCGTGTGTTCGAGA+AGG 0.586353 7_4:-45098917 Msa1156670:CDS
TATTCAACCCAACAGTGCAA+TGG 0.598990 7_4:-45097018 Msa1156670:CDS
TTTCAAGGTCAATAGAGGAA+GGG 0.599454 7_4:+45102091 None:intergenic
GCAGCAACTGTGAATACCCA+TGG 0.603326 7_4:+45099372 None:intergenic
GGCTGCAAGTATGTTCACAC+CGG 0.606481 7_4:+45097998 None:intergenic
CCAGCAGTCCCAGCAACATG+AGG 0.615901 7_4:+45097885 None:intergenic
GGCAATGGTACTGTAAAAGG+TGG 0.617624 7_4:-45099669 Msa1156670:CDS
ATACCAAATATGCTTGCACC+TGG 0.619034 7_4:+45099693 None:intergenic
AAATCAGCTATCATGACCAC+CGG 0.620394 7_4:-45097819 Msa1156670:intron
AGTACTATTACAGATTCTCA+AGG 0.622986 7_4:-45099510 Msa1156670:CDS
GCACGTGACTTTGTAGGCCA+CGG 0.623264 7_4:-45099753 Msa1156670:CDS
TGTACTTGGTGGCCCAACAT+TGG 0.624573 7_4:+45096791 None:intergenic
CCCAACAGTGCAATGGACCC+AGG 0.625551 7_4:-45097011 Msa1156670:CDS
CCTATATGCAGAAAATCCAA+AGG 0.629857 7_4:-45101725 Msa1156670:intron
TTGCAACCTACAAAGTGTGT+TGG 0.630247 7_4:-45099629 Msa1156670:CDS
CAGCAGTCCCAGCAACATGA+GGG 0.631088 7_4:+45097886 None:intergenic
AACATTAGTAACACTTCCAG+GGG 0.631324 7_4:+45099398 None:intergenic
ATGGCTTCATACTCATCTAG+AGG 0.632404 7_4:-45098194 Msa1156670:CDS
AGGTCAATAGAGGAAGGGGT+TGG 0.633028 7_4:+45102096 None:intergenic
AAACCTCGACGATTGTCTGT+TGG 0.633358 7_4:+45097945 None:intergenic
CATTGGTAACAAAACTGTCA+CGG 0.634113 7_4:-45099313 Msa1156670:intron
AATTCCAGCAAAATGGCGTG+GGG 0.638524 7_4:-45100219 Msa1156670:CDS
AGAGTGAAAGACTGGTTAGG+TGG 0.647696 7_4:+45099160 None:intergenic
TCATCTGAATTGGAGTCCTG+CGG 0.650874 7_4:-45097847 Msa1156670:CDS
GCTGCAAGTATGTTCACACC+GGG 0.652846 7_4:+45097999 None:intergenic
AGTGGCGTGTGTTCGAGAAG+GGG 0.653022 7_4:-45098915 Msa1156670:CDS
TACTTGGGAGCACATTCACA+TGG 0.657270 7_4:-45102120 Msa1156670:CDS
GCAACAAGTGTGACTCCAAG+GGG 0.669485 7_4:-45096663 Msa1156670:CDS
CATACACTATCAACAGCATG+TGG 0.670621 7_4:-45099726 Msa1156670:CDS
ATATGCAGAAAATCCAAAGG+TGG 0.670832 7_4:-45101722 Msa1156670:intron
TTGATAGTAGACAAAACATG+AGG 0.676401 7_4:+45098506 None:intergenic
ATTGAGCAAGCCATTAGTGA+TGG 0.685160 7_4:-45099564 Msa1156670:CDS
ATTCCAGCAAAATGGCGTGG+GGG 0.708593 7_4:-45100218 Msa1156670:CDS
TTGATAGTGTATGCGTACCG+TGG 0.721153 7_4:+45099736 None:intergenic
TTACCAACAGACAATCGTCG+AGG 0.726503 7_4:-45097948 Msa1156670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTGTATTCA+AGG - chr7_4:45098021-45098040 Msa1156670:intron 10.0%
!! TGTAATTCTTAAAAATAAAT+TGG + chr7_4:45099207-45099226 None:intergenic 10.0%
!!! GATGAATAATTTTTTTTTTT+TGG + chr7_4:45100860-45100879 None:intergenic 10.0%
!! AGGTATTAAAAATTGTAAAT+TGG + chr7_4:45096895-45096914 None:intergenic 15.0%
!!! ATTAAATAAACGATTTTGAT+TGG + chr7_4:45097710-45097729 None:intergenic 15.0%
!!! CTAAAATAGAAATACAATTT+TGG + chr7_4:45098429-45098448 None:intergenic 15.0%
!! ATTATAAATTAATTGCGAAT+AGG + chr7_4:45098491-45098510 None:intergenic 15.0%
!! TTGTAATAATTAAATCAAGT+TGG - chr7_4:45098728-45098747 Msa1156670:intron 15.0%
!! TAATTTACTTTGAATAGTTT+AGG + chr7_4:45098916-45098935 None:intergenic 15.0%
!! TTTAAATTAATTTCATCTAC+AGG - chr7_4:45100558-45100577 Msa1156670:intron 15.0%
!! ATATATAGTTAATAATTACG+CGG + chr7_4:45100787-45100806 None:intergenic 15.0%
!! TATACAATCATAATTGATAT+TGG - chr7_4:45101466-45101485 Msa1156670:intron 15.0%
!! ATCATATATAACAATTGTAT+AGG - chr7_4:45102036-45102055 Msa1156670:intron 15.0%
!! ATGATGTAACTTTGTAATTA+TGG - chr7_4:45096839-45096858 Msa1156670:CDS 20.0%
!!! AAAGAATTTTGATGATAACA+AGG + chr7_4:45096915-45096934 None:intergenic 20.0%
!! GTTATCATCAAAATTCTTTA+AGG - chr7_4:45096916-45096935 Msa1156670:CDS 20.0%
!! TAACACTGTAAATGATAAAT+AGG + chr7_4:45097070-45097089 None:intergenic 20.0%
!! TCATATAATAAACAGATCAA+TGG - chr7_4:45097323-45097342 Msa1156670:intron 20.0%
!!! ATTTTTTATACTCTTTATGC+TGG + chr7_4:45097829-45097848 None:intergenic 20.0%
!! ACTACAAAGAAAAACATTAT+CGG - chr7_4:45097861-45097880 Msa1156670:CDS 20.0%
!!! AAACTGTATTTAGTTTAACA+AGG + chr7_4:45097998-45098017 None:intergenic 20.0%
!!! ACACACAAATTTGTTTTTAA+GGG - chr7_4:45098300-45098319 Msa1156670:intron 20.0%
!! CTTAGATTAATTAACCTATA+TGG - chr7_4:45098587-45098606 Msa1156670:CDS 20.0%
!!! TTTATTTGAAATTTGCGAAA+GGG - chr7_4:45098684-45098703 Msa1156670:intron 20.0%
!!! TCAATACAATGTTTTTACTT+AGG + chr7_4:45099102-45099121 None:intergenic 20.0%
!!! AAATTGGAGAAAGATTATTT+TGG + chr7_4:45099191-45099210 None:intergenic 20.0%
!!! TTTCCAACTTTTATATTACT+AGG - chr7_4:45100011-45100030 Msa1156670:intron 20.0%
!!! TTCCAACTTTTATATTACTA+GGG - chr7_4:45100012-45100031 Msa1156670:intron 20.0%
!! TTTGTAAAGAAAAATTCTGT+TGG + chr7_4:45100144-45100163 None:intergenic 20.0%
!! TTATCGAATAAATGATGAAT+AGG + chr7_4:45100370-45100389 None:intergenic 20.0%
!! ATTCATCATTTATTCGATAA+TGG - chr7_4:45100370-45100389 Msa1156670:intron 20.0%
!! TTCATCATTTATTCGATAAT+GGG - chr7_4:45100371-45100390 Msa1156670:intron 20.0%
!! TACATGATTTCACTAAAAAA+AGG + chr7_4:45100813-45100832 None:intergenic 20.0%
!! GACTATTATCAAGATTATAT+AGG - chr7_4:45101528-45101547 Msa1156670:intron 20.0%
!!! TTCATCTTCTATTTTAACAT+AGG + chr7_4:45101779-45101798 None:intergenic 20.0%
!! ACAACATTTAAACCAATATT+TGG + chr7_4:45102386-45102405 None:intergenic 20.0%
!! ATCAACAAAAATTTGAAGCT+TGG + chr7_4:45096784-45096803 None:intergenic 25.0%
! TTACAAAGTTACATCATCAT+TGG + chr7_4:45096836-45096855 None:intergenic 25.0%
! TAATATTTGTTCAAGTGTAC+AGG + chr7_4:45096866-45096885 None:intergenic 25.0%
! ATCTTCTCATTATGATTTAC+TGG - chr7_4:45097156-45097175 Msa1156670:intron 25.0%
! TCTTCTCATTATGATTTACT+GGG - chr7_4:45097157-45097176 Msa1156670:intron 25.0%
! TATAGAGCATAGAATTATTG+TGG + chr7_4:45097683-45097702 None:intergenic 25.0%
! ACTAAATACATAAGAGTCTT+TGG - chr7_4:45097971-45097990 Msa1156670:CDS 25.0%
!! ATGAGATGTTAACTTTTGAT+TGG + chr7_4:45098095-45098114 None:intergenic 25.0%
!!! GACACACAAATTTGTTTTTA+AGG - chr7_4:45098299-45098318 Msa1156670:intron 25.0%
!!! AATGTTTGCTATTGAACAAT+TGG - chr7_4:45098544-45098563 Msa1156670:CDS 25.0%
! CTTTCGCAAATTTCAAATAA+AGG + chr7_4:45098685-45098704 None:intergenic 25.0%
!! CTTTATTTGAAATTTGCGAA+AGG - chr7_4:45098683-45098702 Msa1156670:intron 25.0%
!! AAATTATCCTTGTTTGCATT+AGG - chr7_4:45098930-45098949 Msa1156670:CDS 25.0%
! TGTCAAATTAACAAACTCAA+AGG - chr7_4:45099029-45099048 Msa1156670:intron 25.0%
! CTTATTAATTGTTGTGCATA+AGG + chr7_4:45099145-45099164 None:intergenic 25.0%
! CTTATGCACAACAATTAATA+AGG - chr7_4:45099143-45099162 Msa1156670:CDS 25.0%
! TCCTATTACATAACTCTTTA+CGG - chr7_4:45099228-45099247 Msa1156670:intron 25.0%
! ATTCTTAATCAGATTCAAAG+AGG + chr7_4:45099262-45099281 None:intergenic 25.0%
! TTGAAGGATATGATTTCAAT+AGG - chr7_4:45099734-45099753 Msa1156670:CDS 25.0%
! AATCATCATCAACATAGATT+TGG - chr7_4:45099979-45099998 Msa1156670:intron 25.0%
! CAATGATACGCATATAAAAA+AGG + chr7_4:45100228-45100247 None:intergenic 25.0%
!!! ATTTTGCTTTCTTTGAGAAT+AGG + chr7_4:45100476-45100495 None:intergenic 25.0%
!! CTTATGGAAAATTCTTTTCT+TGG + chr7_4:45100594-45100613 None:intergenic 25.0%
!! TATAACACCTTTAGTATTGA+TGG + chr7_4:45101065-45101084 None:intergenic 25.0%
!!! CTGTCTTTATTTCTATTCAA+TGG - chr7_4:45101139-45101158 Msa1156670:intron 25.0%
! AATGTTGAAGAGGATAAAAT+TGG - chr7_4:45101674-45101693 Msa1156670:CDS 25.0%
!!! ATATTTGGTAATGTGATTGA+AGG + chr7_4:45102371-45102390 None:intergenic 25.0%
! TCAATCACATTACCAAATAT+TGG - chr7_4:45102371-45102390 Msa1156670:intron 25.0%
!! ACTTTTGCAAAATATGTACT+TGG + chr7_4:45102443-45102462 None:intergenic 25.0%
! TCCTTGAATTTCAAGAAAAT+AGG - chr7_4:45102500-45102519 Msa1156670:intron 25.0%
!! ACCTATTTTCTTGAAATTCA+AGG + chr7_4:45102504-45102523 None:intergenic 25.0%
AATGAGCAAATAAAGAGCAA+TGG + chr7_4:45096808-45096827 None:intergenic 30.0%
TATGTTTGTGTGATTAGTGT+TGG + chr7_4:45096965-45096984 None:intergenic 30.0%
ACAGTGTTACATTGTATACT+TGG - chr7_4:45097081-45097100 Msa1156670:CDS 30.0%
CAGTGTTACATTGTATACTT+GGG - chr7_4:45097082-45097101 Msa1156670:CDS 30.0%
GAGCAAGTAAAATATTGCAA+TGG + chr7_4:45097220-45097239 None:intergenic 30.0%
TAGTCACATGACTAACTAAT+AGG - chr7_4:45098057-45098076 Msa1156670:intron 30.0%
! TGTTCTTATGACACTTGTTA+TGG + chr7_4:45098455-45098474 None:intergenic 30.0%
AAACATTATCCCAACATTGA+TGG + chr7_4:45098531-45098550 None:intergenic 30.0%
!! AATTAAATCAAGTTGGTCAC+AGG - chr7_4:45098735-45098754 Msa1156670:intron 30.0%
TAAATATTCAACCTGTTGCA+TGG + chr7_4:45099068-45099087 None:intergenic 30.0%
AAAGCATATGAACGTGATAA+CGG - chr7_4:45099416-45099435 Msa1156670:CDS 30.0%
TATATCAACACCATCACTAA+TGG + chr7_4:45099666-45099685 None:intergenic 30.0%
GATATAATCTCACTTTCTCT+TGG - chr7_4:45099680-45099699 Msa1156670:CDS 30.0%
AGTACTATTACAGATTCTCA+AGG - chr7_4:45099707-45099726 Msa1156670:CDS 30.0%
! AGATTCTCAAGGAATTTTGA+AGG - chr7_4:45099718-45099737 Msa1156670:CDS 30.0%
! ATTTTATTAGTTGCATCTGC+TGG - chr7_4:45099782-45099801 Msa1156670:CDS 30.0%
CTCCCTAGTAATATAAAAGT+TGG + chr7_4:45100017-45100036 None:intergenic 30.0%
!! ATTTTTCCACTTGCTTTAGA+AGG + chr7_4:45100282-45100301 None:intergenic 30.0%
TAAAGCAAGTGGAAAAATAG+TGG - chr7_4:45100284-45100303 Msa1156670:intron 30.0%
! GAATGAGATCACATTAGTTT+AGG + chr7_4:45100504-45100523 None:intergenic 30.0%
AGAAATCAACCAAGAATCAA+TGG - chr7_4:45100669-45100688 Msa1156670:intron 30.0%
GAAATCAACCAAGAATCAAT+GGG - chr7_4:45100670-45100689 Msa1156670:intron 30.0%
! TTGATAGTAGACAAAACATG+AGG + chr7_4:45100714-45100733 None:intergenic 30.0%
TTAACAAGAGGACATAGTAT+AGG - chr7_4:45100753-45100772 Msa1156670:intron 30.0%
!!! TTTTTGGTTGATAGCAAGAA+GGG + chr7_4:45100844-45100863 None:intergenic 30.0%
!!! TTTTTTGGTTGATAGCAAGA+AGG + chr7_4:45100845-45100864 None:intergenic 30.0%
AATTCAGCCATCAATACTAA+AGG - chr7_4:45101055-45101074 Msa1156670:intron 30.0%
TTCCTTGCATTACATTGAAT+GGG + chr7_4:45101298-45101317 None:intergenic 30.0%
TCAAAACACTTCATCTGAAT+TGG - chr7_4:45101360-45101379 Msa1156670:intron 30.0%
TTCATTGATCAATGTTGAAG+AGG - chr7_4:45101664-45101683 Msa1156670:CDS 30.0%
CTCACATTTATCACTAGATT+TGG - chr7_4:45101736-45101755 Msa1156670:intron 30.0%
! TATCACTAGATTTGGTCATT+TGG - chr7_4:45101744-45101763 Msa1156670:intron 30.0%
GATAATAAGTGTGATTGTAG+AGG + chr7_4:45102007-45102026 None:intergenic 30.0%
! TTTTCGAATGCATCACTTAT+AGG + chr7_4:45102143-45102162 None:intergenic 30.0%
AACATGACATTTACTTGTTC+AGG - chr7_4:45102317-45102336 Msa1156670:intron 30.0%
TTTGCAAAATATGTACTTGG+TGG + chr7_4:45102440-45102459 None:intergenic 30.0%
! CAATTTTATATCCAGGCAAT+TGG + chr7_4:45102466-45102485 None:intergenic 30.0%
! ACAACAGCAATTTTATATCC+AGG + chr7_4:45102473-45102492 None:intergenic 30.0%
TTCTTGAAATTCAAGGAACT+TGG + chr7_4:45102497-45102516 None:intergenic 30.0%
! CAAATGGAAAGCATATTGTA+AGG - chr7_4:45102606-45102625 Msa1156670:CDS 30.0%
TTTCAAGGTCAATAGAGGAA+GGG + chr7_4:45097129-45097148 None:intergenic 35.0%
TGATTTACTGGGTTCAATCT+TGG - chr7_4:45097168-45097187 Msa1156670:intron 35.0%
GATTTACTGGGTTCAATCTT+GGG - chr7_4:45097169-45097188 Msa1156670:intron 35.0%
AGTGAGTAACAGAATTAGCA+TGG - chr7_4:45097389-45097408 Msa1156670:intron 35.0%
CTACAAAATGTTTGTGACAG+TGG + chr7_4:45097417-45097436 None:intergenic 35.0%
! CCTTTGGATTTTCTGCATAT+AGG + chr7_4:45097495-45097514 None:intergenic 35.0%
CCTATATGCAGAAAATCCAA+AGG - chr7_4:45097492-45097511 Msa1156670:intron 35.0%
ATATGCAGAAAATCCAAAGG+TGG - chr7_4:45097495-45097514 Msa1156670:intron 35.0%
CAAATGATATCAACTCAGCT+TGG - chr7_4:45097587-45097606 Msa1156670:intron 35.0%
TGAATCGATGTTAGCTATGA+TGG + chr7_4:45097638-45097657 None:intergenic 35.0%
!! ATCATAGCTAACATCGATTC+AGG - chr7_4:45097637-45097656 Msa1156670:intron 35.0%
GAGAAATCAGTAGAAAAACG+AGG - chr7_4:45098204-45098223 Msa1156670:CDS 35.0%
AATCAGTAGAAAAACGAGGT+AGG - chr7_4:45098208-45098227 Msa1156670:CDS 35.0%
ATCAGTAGAAAAACGAGGTA+GGG - chr7_4:45098209-45098228 Msa1156670:CDS 35.0%
ACTTGATAGACCATCAATGT+TGG - chr7_4:45098518-45098537 Msa1156670:CDS 35.0%
CTTGATAGACCATCAATGTT+GGG - chr7_4:45098519-45098538 Msa1156670:CDS 35.0%
! ATTTGAAATTTGCGAAAGGG+AGG - chr7_4:45098687-45098706 Msa1156670:intron 35.0%
GCCGTAAAGAGTTATGTAAT+AGG + chr7_4:45099232-45099251 None:intergenic 35.0%
TTGCACTACATAAACAAACC+AGG - chr7_4:45099366-45099385 Msa1156670:CDS 35.0%
AAACAAACCAGGAAGCTAAT+TGG - chr7_4:45099377-45099396 Msa1156670:CDS 35.0%
!! AGCATATTTGGTATTGGCAA+TGG - chr7_4:45099533-45099552 Msa1156670:CDS 35.0%
ATTGGCAATGGTACTGTAAA+AGG - chr7_4:45099545-45099564 Msa1156670:CDS 35.0%
AACATTAGTAACACTTCCAG+GGG + chr7_4:45099822-45099841 None:intergenic 35.0%
CAACATTAGTAACACTTCCA+GGG + chr7_4:45099823-45099842 None:intergenic 35.0%
TGTTACTAATGTTGCTCCAT+GGG - chr7_4:45099829-45099848 Msa1156670:CDS 35.0%
TTCAGCAGTATTATGACCAT+TGG - chr7_4:45099887-45099906 Msa1156670:intron 35.0%
! CATTGGTAACAAAACTGTCA+CGG - chr7_4:45099904-45099923 Msa1156670:intron 35.0%
AAACTGTCACGGTAATATTC+TGG - chr7_4:45099915-45099934 Msa1156670:intron 35.0%
TGGCAAGTTTACAAATAGAC+TGG + chr7_4:45100040-45100059 None:intergenic 35.0%
!! TTTCACTCTAGTGGATTCTA+CGG - chr7_4:45100071-45100090 Msa1156670:intron 35.0%
!! TTGACATCTGGAGTATTGTT+TGG - chr7_4:45100342-45100361 Msa1156670:intron 35.0%
! CTTTGAGAATAGGTGGTTTA+GGG + chr7_4:45100466-45100485 None:intergenic 35.0%
! TCTTTGAGAATAGGTGGTTT+AGG + chr7_4:45100467-45100486 None:intergenic 35.0%
! TTGCTTTCTTTGAGAATAGG+TGG + chr7_4:45100473-45100492 None:intergenic 35.0%
!! AGTATTCTCCCATTGATTCT+TGG + chr7_4:45100681-45100700 None:intergenic 35.0%
GACAAGCATCAATTAACAAG+AGG - chr7_4:45100741-45100760 Msa1156670:intron 35.0%
TCACAAGCAAAAACACTCTT+TGG - chr7_4:45100981-45101000 Msa1156670:intron 35.0%
! ATTGATGGCTGAATTTCACT+TGG + chr7_4:45101050-45101069 None:intergenic 35.0%
TTTGTTTCAGCCTGATGTAA+CGG - chr7_4:45101193-45101212 Msa1156670:intron 35.0%
TGCACTTGCAAACAATGAAT+AGG + chr7_4:45101243-45101262 None:intergenic 35.0%
TTCCCATTCAATGTAATGCA+AGG - chr7_4:45101293-45101312 Msa1156670:intron 35.0%
GTTCCTTGCATTACATTGAA+TGG + chr7_4:45101299-45101318 None:intergenic 35.0%
TAGAGTGAGAGAGAAAATAC+CGG + chr7_4:45101420-45101439 None:intergenic 35.0%
GTTGAAGAGGATAAAATTGG+TGG - chr7_4:45101677-45101696 Msa1156670:CDS 35.0%
AGAAGATGAAACTCCATTGA+TGG - chr7_4:45101789-45101808 Msa1156670:intron 35.0%
! AAGCTTTTCTCTTCCATCAA+TGG + chr7_4:45101805-45101824 None:intergenic 35.0%
GTTAGAAAACAGCTAACAAG+CGG - chr7_4:45101954-45101973 Msa1156670:intron 35.0%
TGTGATTGTAGAGGTTACTT+GGG + chr7_4:45101998-45102017 None:intergenic 35.0%
ACTGCAAATCCATTTGCTTA+TGG - chr7_4:45102167-45102186 Msa1156670:intron 35.0%
AATCCATTTGCTTATGGTTC+AGG - chr7_4:45102173-45102192 Msa1156670:intron 35.0%
TGTTTATGACCTAGGGATTA+AGG - chr7_4:45102232-45102251 Msa1156670:intron 35.0%
TCAAGTAATCCTTAATCCCT+AGG + chr7_4:45102244-45102263 None:intergenic 35.0%
TTGAACTTCTTATGTGCTTC+TGG - chr7_4:45102260-45102279 Msa1156670:intron 35.0%
!! TAAGTGCTGAAATGAGTTGT+TGG + chr7_4:45102292-45102311 None:intergenic 35.0%
CATTTGCGTTGAACAGTAAT+GGG + chr7_4:45102635-45102654 None:intergenic 35.0%
TCATTTGCGTTGAACAGTAA+TGG + chr7_4:45102636-45102655 None:intergenic 35.0%
TTCAGAAGCGACTTAACTTC+AGG - chr7_4:45096716-45096735 Msa1156670:CDS 40.0%
TTCAGTAACAAGTTGCCTTC+AGG - chr7_4:45096753-45096772 Msa1156670:CDS 40.0%
TTCAAGGTCAATAGAGGAAG+GGG + chr7_4:45097128-45097147 None:intergenic 40.0%
GTTTCAAGGTCAATAGAGGA+AGG + chr7_4:45097130-45097149 None:intergenic 40.0%
AGCAGTTTCAAGGTCAATAG+AGG + chr7_4:45097134-45097153 None:intergenic 40.0%
GAGAAGATGTAGCAGTTTCA+AGG + chr7_4:45097144-45097163 None:intergenic 40.0%
AAGAACACAGATACCACCTT+TGG + chr7_4:45097511-45097530 None:intergenic 40.0%
ACACGTTCTTGGGAATTTCT+TGG - chr7_4:45097556-45097575 Msa1156670:intron 40.0%
TATCAACTCAGCTTGGCAAA+AGG - chr7_4:45097594-45097613 Msa1156670:intron 40.0%
ATCAACTCAGCTTGGCAAAA+GGG - chr7_4:45097595-45097614 Msa1156670:intron 40.0%
AGTTGAACCAACCAACAGAT+TGG + chr7_4:45097954-45097973 None:intergenic 40.0%
TCAGTAGAAAAACGAGGTAG+GGG - chr7_4:45098210-45098229 Msa1156670:CDS 40.0%
! CGTGGTTTTTGTCTCCATAT+AGG + chr7_4:45098604-45098623 None:intergenic 40.0%
CCAAACACCTAATGCAAACA+AGG + chr7_4:45098940-45098959 None:intergenic 40.0%
! CCTTGTTTGCATTAGGTGTT+TGG - chr7_4:45098937-45098956 Msa1156670:CDS 40.0%
TCGCTAAAACTCTTCGATTC+CGG + chr7_4:45098963-45098982 None:intergenic 40.0%
!! AGTTTTAGCGACAGAGGAAT+AGG - chr7_4:45098972-45098991 Msa1156670:intron 40.0%
CAAAGAAACTTCCATGCAAC+AGG - chr7_4:45099054-45099073 Msa1156670:intron 40.0%
CATACACTATCAACAGCATG+TGG - chr7_4:45099491-45099510 Msa1156670:CDS 40.0%
ATACCAAATATGCTTGCACC+TGG + chr7_4:45099527-45099546 None:intergenic 40.0%
GGTGCAAGCATATTTGGTAT+TGG - chr7_4:45099527-45099546 Msa1156670:CDS 40.0%
TTGCAACCTACAAAGTGTGT+TGG - chr7_4:45099588-45099607 Msa1156670:CDS 40.0%
TTGAGACCAACACACTTTGT+AGG + chr7_4:45099597-45099616 None:intergenic 40.0%
ATTGAGCAAGCCATTAGTGA+TGG - chr7_4:45099653-45099672 Msa1156670:CDS 40.0%
GCAACATTAGTAACACTTCC+AGG + chr7_4:45099824-45099843 None:intergenic 40.0%
! GTGTTACTAATGTTGCTCCA+TGG - chr7_4:45099828-45099847 Msa1156670:CDS 40.0%
!!! CGTGACAGTTTTGTTACCAA+TGG + chr7_4:45099906-45099925 None:intergenic 40.0%
! ACTAGAGTGAAAGACTGGTT+AGG + chr7_4:45100063-45100082 None:intergenic 40.0%
TAACCAGTCTTTCACTCTAG+TGG - chr7_4:45100062-45100081 Msa1156670:intron 40.0%
AATCCACTAGAGTGAAAGAC+TGG + chr7_4:45100068-45100087 None:intergenic 40.0%
TTAGAAGGATCAAGTGTTCC+TGG + chr7_4:45100267-45100286 None:intergenic 40.0%
!! CTTGATCCTTCTAAAGCAAG+TGG - chr7_4:45100273-45100292 Msa1156670:intron 40.0%
ACTTCGAACACTTTGACATC+TGG - chr7_4:45100330-45100349 Msa1156670:intron 40.0%
TTCCATAAGTTCAGTTGCTC+AGG - chr7_4:45100605-45100624 Msa1156670:intron 40.0%
TCCATAAGTTCAGTTGCTCA+GGG - chr7_4:45100606-45100625 Msa1156670:intron 40.0%
TCAGGGTCAAGAAGCTAAAT+CGG - chr7_4:45100623-45100642 Msa1156670:intron 40.0%
GATGAGTATGAAGCCATAAC+TGG + chr7_4:45101020-45101039 None:intergenic 40.0%
ATGGCTTCATACTCATCTAG+AGG - chr7_4:45101023-45101042 Msa1156670:intron 40.0%
! ATAGCTGATTTAATAGCCGC+AGG + chr7_4:45101389-45101408 None:intergenic 40.0%
AAATCAGCTATCATGACCAC+CGG - chr7_4:45101398-45101417 Msa1156670:intron 40.0%
GTGTGATTGTAGAGGTTACT+TGG + chr7_4:45101999-45102018 None:intergenic 40.0%
!! CTTGTTGGTGTTATCTCTTG+TGG + chr7_4:45102120-45102139 None:intergenic 40.0%
TGCATCACTTATAGGCTTGT+TGG + chr7_4:45102135-45102154 None:intergenic 40.0%
TGTCCTGAACCATAAGCAAA+TGG + chr7_4:45102179-45102198 None:intergenic 40.0%
TATTCAACCCAACAGTGCAA+TGG - chr7_4:45102199-45102218 Msa1156670:intron 40.0%
CTAGGTCATAAACAAGTCCT+GGG + chr7_4:45102226-45102245 None:intergenic 40.0%
! CAGGACTTGTTTATGACCTA+GGG - chr7_4:45102225-45102244 Msa1156670:intron 40.0%
ACTCGTATAGTCACCAATGT+TGG - chr7_4:45102413-45102432 Msa1156670:intron 40.0%
CTCGTATAGTCACCAATGTT+GGG - chr7_4:45102414-45102433 Msa1156670:intron 40.0%
TTTGCAAAAGTCCAATTGCC+TGG - chr7_4:45102452-45102471 Msa1156670:intron 40.0%
! CCAAATTGGTATTTTCCCCT+TGG + chr7_4:45102572-45102591 None:intergenic 40.0%
CCAAGGGGAAAATACCAATT+TGG - chr7_4:45102569-45102588 Msa1156670:intron 40.0%
ACCAATTTGGAGAACTGCAA+TGG - chr7_4:45102582-45102601 Msa1156670:intron 40.0%
TCCATTGCAGTTCTCCAAAT+TGG + chr7_4:45102586-45102605 None:intergenic 40.0%
CTTCTGGACTTCTTGTCTTC+AGG - chr7_4:45096642-45096661 Msa1156670:CDS 45.0%
!! TTCAGAAGCGTCTTAACGTC+AGG - chr7_4:45096679-45096698 Msa1156670:CDS 45.0%
! TACTTGGGAGCACATTCACA+TGG - chr7_4:45097097-45097116 Msa1156670:CDS 45.0%
TACTGGGTTCAATCTTGGGA+AGG - chr7_4:45097173-45097192 Msa1156670:intron 45.0%
AACTGCACACTACACGTTCT+TGG - chr7_4:45097545-45097564 Msa1156670:intron 45.0%
ACTGCACACTACACGTTCTT+GGG - chr7_4:45097546-45097565 Msa1156670:intron 45.0%
AAACTGGCCAATCTGTTGGT+TGG - chr7_4:45097944-45097963 Msa1156670:CDS 45.0%
CAGTAGAAAAACGAGGTAGG+GGG - chr7_4:45098211-45098230 Msa1156670:CDS 45.0%
GATGACTGCAAAGACAGAAG+CGG - chr7_4:45098275-45098294 Msa1156670:intron 45.0%
AACCACGTGCTTTCTTTGAG+TGG - chr7_4:45098617-45098636 Msa1156670:CDS 45.0%
GTTTGCATTAGGTGTTTGGC+CGG - chr7_4:45098941-45098960 Msa1156670:CDS 45.0%
!! TCGAAGAGTTTTAGCGACAG+AGG - chr7_4:45098966-45098985 Msa1156670:CDS 45.0%
TAGGCCCAATTCCAGCAAAA+TGG - chr7_4:45098991-45099010 Msa1156670:intron 45.0%
!! CACGCCATTTTGCTGGAATT+GGG + chr7_4:45098998-45099017 None:intergenic 45.0%
CAATTCCAGCAAAATGGCGT+GGG - chr7_4:45098997-45099016 Msa1156670:intron 45.0%
AATTCCAGCAAAATGGCGTG+GGG - chr7_4:45098998-45099017 Msa1156670:intron 45.0%
! TCTTGCTCCAATTAGCTTCC+TGG + chr7_4:45099387-45099406 None:intergenic 45.0%
CAAACAGCACGTGACTTTGT+AGG - chr7_4:45099458-45099477 Msa1156670:CDS 45.0%
!! TTGATAGTGTATGCGTACCG+TGG + chr7_4:45099484-45099503 None:intergenic 45.0%
GTACCAGGTGCAAGCATATT+TGG - chr7_4:45099521-45099540 Msa1156670:CDS 45.0%
GGCAATGGTACTGTAAAAGG+TGG - chr7_4:45099548-45099567 Msa1156670:CDS 45.0%
!! TAGGTTGCAACTCTAGCTCT+TGG + chr7_4:45099578-45099597 None:intergenic 45.0%
GTTGCATCTGCTGGAAATGA+TGG - chr7_4:45099791-45099810 Msa1156670:CDS 45.0%
TTAGTAACACTTCCAGGGGT+TGG + chr7_4:45099818-45099837 None:intergenic 45.0%
! AGAGTGAAAGACTGGTTAGG+TGG + chr7_4:45100060-45100079 None:intergenic 45.0%
! CGCATCTCGATTTGTCACAT+TGG + chr7_4:45100109-45100128 None:intergenic 45.0%
! TGCAGACGATTTTGTAGACC+AGG - chr7_4:45100246-45100265 Msa1156670:CDS 45.0%
ACCCTGAGCAACTGAACTTA+TGG + chr7_4:45100610-45100629 None:intergenic 45.0%
AGCTAAATCGGCAAGAGCAA+AGG - chr7_4:45100635-45100654 Msa1156670:intron 45.0%
GCTAAATCGGCAAGAGCAAA+GGG - chr7_4:45100636-45100655 Msa1156670:intron 45.0%
AAGAAAGCCAGCTCCAGTTA+TGG - chr7_4:45101004-45101023 Msa1156670:intron 45.0%
TATGAAGCCATAACTGGAGC+TGG + chr7_4:45101014-45101033 None:intergenic 45.0%
TTACCAACAGACAATCGTCG+AGG - chr7_4:45101269-45101288 Msa1156670:intron 45.0%
AAACCTCGACGATTGTCTGT+TGG + chr7_4:45101275-45101294 None:intergenic 45.0%
TCATCTGAATTGGAGTCCTG+CGG - chr7_4:45101370-45101389 Msa1156670:intron 45.0%
AGTGAGAGAGAAAATACCGG+TGG + chr7_4:45101417-45101436 None:intergenic 45.0%
TCTCTCTCACTCTACACACA+AGG - chr7_4:45101426-45101445 Msa1156670:intron 45.0%
ATTGTAGAGGTTACTTGGGC+AGG + chr7_4:45101994-45102013 None:intergenic 45.0%
TATCTCTTGTGGTTGCTGCA+AGG + chr7_4:45102109-45102128 None:intergenic 45.0%
CCTAGGTCATAAACAAGTCC+TGG + chr7_4:45102227-45102246 None:intergenic 45.0%
! CCAGGACTTGTTTATGACCT+AGG - chr7_4:45102224-45102243 Msa1156670:intron 45.0%
AAGCAACAAGTGTGACTCCA+AGG - chr7_4:45102552-45102571 Msa1156670:intron 45.0%
AGCAACAAGTGTGACTCCAA+GGG - chr7_4:45102553-45102572 Msa1156670:intron 45.0%
GGAGAACTGCAATGGACAAA+TGG - chr7_4:45102590-45102609 Msa1156670:CDS 45.0%
!! AATAATAAAAATGATAAAAT+TGG + chr7_4:45098772-45098791 None:intergenic 5.0%
! GCTTCTGATGATGCAGCTTC+TGG - chr7_4:45096596-45096615 Msa1156670:CDS 50.0%
AGGTCAATAGAGGAAGGGGT+TGG + chr7_4:45097124-45097143 None:intergenic 50.0%
ACTCAGCTTGGCAAAAGGGA+AGG - chr7_4:45097599-45097618 Msa1156670:intron 50.0%
GCTTGGCAAAAGGGAAGGTT+TGG - chr7_4:45097604-45097623 Msa1156670:intron 50.0%
CGAGAAATATAGCGACTGCC+AGG - chr7_4:45097912-45097931 Msa1156670:CDS 50.0%
! CCAACAGATTGGCCAGTTTC+CGG + chr7_4:45097943-45097962 None:intergenic 50.0%
GAAAAACGAGGTAGGGGGAA+TGG - chr7_4:45098216-45098235 Msa1156670:CDS 50.0%
GTCATCATCATCGCTGCTTC+CGG + chr7_4:45098261-45098280 None:intergenic 50.0%
! GTCCACTCAAAGAAAGCACG+TGG + chr7_4:45098622-45098641 None:intergenic 50.0%
!! CCACGCCATTTTGCTGGAAT+TGG + chr7_4:45098999-45099018 None:intergenic 50.0%
CCAATTCCAGCAAAATGGCG+TGG - chr7_4:45098996-45099015 Msa1156670:intron 50.0%
ATTCCAGCAAAATGGCGTGG+GGG - chr7_4:45098999-45099018 Msa1156670:intron 50.0%
GCATGTGGAAACTTCGTACC+AGG - chr7_4:45099506-45099525 Msa1156670:CDS 50.0%
GCAGCAACTGTGAATACCCA+TGG + chr7_4:45099848-45099867 None:intergenic 50.0%
ATAGTGGCGTGTGTTCGAGA+AGG - chr7_4:45100300-45100319 Msa1156670:intron 50.0%
TAGTGGCGTGTGTTCGAGAA+GGG - chr7_4:45100301-45100320 Msa1156670:intron 50.0%
GCTGCAAGTATGTTCACACC+GGG + chr7_4:45101221-45101240 None:intergenic 50.0%
GGCTGCAAGTATGTTCACAC+CGG + chr7_4:45101222-45101241 None:intergenic 50.0%
ATGTCTTGCCCTCATGTTGC+TGG - chr7_4:45101323-45101342 Msa1156670:intron 50.0%
TGTCTTGCCCTCATGTTGCT+GGG - chr7_4:45101324-45101343 Msa1156670:intron 50.0%
! TGTACTTGGTGGCCCAACAT+TGG + chr7_4:45102429-45102448 None:intergenic 50.0%
GCAACAAGTGTGACTCCAAG+GGG - chr7_4:45102554-45102573 Msa1156670:intron 50.0%
TGAAGCTTGGACGCTCCTGA+AGG + chr7_4:45096771-45096790 None:intergenic 55.0%
! TAGCGACTGCCAGGTTGAAC+CGG - chr7_4:45097921-45097940 Msa1156670:CDS 55.0%
! TGCCAGGTTGAACCGGAAAC+TGG - chr7_4:45097928-45097947 Msa1156670:CDS 55.0%
CCGGAAACTGGCCAATCTGT+TGG - chr7_4:45097940-45097959 Msa1156670:CDS 55.0%
!! TTTCCCCCACGCCATTTTGC+TGG + chr7_4:45099005-45099024 None:intergenic 55.0%
!! CGTGCTGTTTGTTGCGAACG+AGG + chr7_4:45099449-45099468 None:intergenic 55.0%
GCACGTGACTTTGTAGGCCA+CGG - chr7_4:45099464-45099483 Msa1156670:CDS 55.0%
!! GGAAATGATGGACCAACCCC+TGG - chr7_4:45099803-45099822 Msa1156670:CDS 55.0%
AGTGGCGTGTGTTCGAGAAG+GGG - chr7_4:45100302-45100321 Msa1156670:intron 55.0%
CAGCAGTCCCAGCAACATGA+GGG + chr7_4:45101334-45101353 None:intergenic 55.0%
CCTGGGTCCATTGCACTGTT+GGG + chr7_4:45102209-45102228 None:intergenic 55.0%
TCCTGGGTCCATTGCACTGT+TGG + chr7_4:45102210-45102229 None:intergenic 55.0%
GGCCAGTTTCCGGTTCAACC+TGG + chr7_4:45097933-45097952 None:intergenic 60.0%
AGGTAGGGGGAATGGCATCG+AGG - chr7_4:45098224-45098243 Msa1156670:CDS 60.0%
! GGGGAATGGCATCGAGGAGA+TGG - chr7_4:45098230-45098249 Msa1156670:CDS 60.0%
CCAGCAGTCCCAGCAACATG+AGG + chr7_4:45101335-45101354 None:intergenic 60.0%
CCTCATGTTGCTGGGACTGC+TGG - chr7_4:45101332-45101351 Msa1156670:intron 60.0%
CCCAACAGTGCAATGGACCC+AGG - chr7_4:45102206-45102225 Msa1156670:intron 60.0%
CATCGAGGAGATGGTCGCGC+CGG - chr7_4:45098239-45098258 Msa1156670:CDS 65.0%
CAGCCTGATGTAACGGCGCC+CGG - chr7_4:45101200-45101219 Msa1156670:intron 65.0%
! ACACCGGGCGCCGTTACATC+AGG + chr7_4:45101206-45101225 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 45096584 45102655 45096584 ID=Msa1156670;Name=Msa1156670
chr7_4 mRNA 45096584 45102655 45096584 ID=Msa1156670-mRNA-1;Parent=Msa1156670;Name=Msa1156670-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.72|0.5|0.91|1|1|12|0|800
chr7_4 exon 45102584 45102655 45102584 ID=Msa1156670-mRNA-1:exon:11739;Parent=Msa1156670-mRNA-1
chr7_4 exon 45102045 45102154 45102045 ID=Msa1156670-mRNA-1:exon:11738;Parent=Msa1156670-mRNA-1
chr7_4 exon 45101850 45101947 45101850 ID=Msa1156670-mRNA-1:exon:11737;Parent=Msa1156670-mRNA-1
chr7_4 exon 45101581 45101736 45101581 ID=Msa1156670-mRNA-1:exon:11736;Parent=Msa1156670-mRNA-1
chr7_4 exon 45100164 45100287 45100164 ID=Msa1156670-mRNA-1:exon:11735;Parent=Msa1156670-mRNA-1
chr7_4 exon 45099314 45099851 45099314 ID=Msa1156670-mRNA-1:exon:11734;Parent=Msa1156670-mRNA-1
chr7_4 exon 45099112 45099206 45099112 ID=Msa1156670-mRNA-1:exon:11733;Parent=Msa1156670-mRNA-1
chr7_4 exon 45098876 45098988 45098876 ID=Msa1156670-mRNA-1:exon:11732;Parent=Msa1156670-mRNA-1
chr7_4 exon 45098452 45098659 45098452 ID=Msa1156670-mRNA-1:exon:11731;Parent=Msa1156670-mRNA-1
chr7_4 exon 45098163 45098292 45098163 ID=Msa1156670-mRNA-1:exon:11730;Parent=Msa1156670-mRNA-1
chr7_4 exon 45097820 45098036 45097820 ID=Msa1156670-mRNA-1:exon:11729;Parent=Msa1156670-mRNA-1
chr7_4 exon 45096584 45097125 45096584 ID=Msa1156670-mRNA-1:exon:11728;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45102584 45102655 45102584 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45102045 45102154 45102045 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45101850 45101947 45101850 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45101581 45101736 45101581 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45100164 45100287 45100164 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45099314 45099851 45099314 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45099112 45099206 45099112 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45098876 45098988 45098876 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45098452 45098659 45098452 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45098163 45098292 45098163 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45097820 45098036 45097820 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
chr7_4 CDS 45096584 45097125 45096584 ID=Msa1156670-mRNA-1:cds;Parent=Msa1156670-mRNA-1
Gene Sequence

>Msa1156670

ATGACTTCTGCAGCTTCTGATGATGCAGCTTCTGATGATACAGCTTCTGATGATGCAGCTTCTGGACTTCTTTGTTACATTGTATACTTGGGAGCACATTCACATGGTCCAACCCCTTCCTCTATTGACCTTGAAACTGCTACATCTTCTCATTATGATTTACTGGGTTCAATCTTGGGAAGCAAAGAGAATGCAAAAGAAGCAATAATTTATTCATATAATAAACAGATCAATGGCTTTGCAGCTATACTTGAAGAAGAAGAAGCTGCACAAATTGCAAAAAATCCAAAGGTGGTATCTGTGTTCTTGAGCAAAGAGCATAAACTGCACACTACACGTTCTTGGGAATTTCTTGGACTAAGTACAAATGATATCAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAAAATACCATCATAGCTAACATCGATTCAGGTGTTTGGCCGGAATCGAAGAGTTTTAGCGACAGAGGAATAGGCCCAATTCCAGCAAAATGGCGTGGGGGAAACATCTGTCAAATTAACAAACTCAAAGGTTCAAAGAAACTTCCATGCAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATATGAACGTGATAACGGCAAACTTCCTCGTTCGCAACAAACAGCACGTGACTTTGTAGGCCACGGTACGCATACACTATCAACAGCATGTGGAAACTTCGTACCAGGTGCAAGCATATTTGGTATTGGCAATGGTACTGTAAAAGGTGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCTCAAAGTGCTATTTGCTATAGTGCTGATATATTAGCTGCTATTGAGCAAGCCATTAGTGATGGTGTTGATATAATCTCACTTTCTCTTGGAAGCAGTACTATTACAGATTCTCAAGGAATTTTGAAGGATATGATTTCAATAGGTGCATTTCATGCGCTTGCTAGAAATATTTTATTAGTTGCATCTGCTGGAAATGATGGACCAACCCCTGGAAGTGTTACTAATGTTGCTCCATGGGTATTCACAGTTGCTGCAAGTACAATTGATAGAGACTTCAGCAGTATTATGACCATTGGTAACAAAACTGTCACGGGAGCCAGTCTATTTGTAAACTTGCCACCTAACCAGTCTTTCACTCTAGTGGATTCTACGGATGTTAAATTTACCAATGTGACAAATCGAGATGCACGATTTTGTAGACCAGGAACACTTGATCCTTCTAAAGCAAGTGGAAAAATAGTGGCGTGTGTTCGAGAAGGGGAAATAACTTCGAACACTTTGACATCTGGAGTATTGTTTGGATATCAATATCCAAGAAAAGAATTTTCCATAAGTTCAGTTGCTCAGGGTCAAGAAGCTAAATCGGCAAGAGCAAAGGGAGTGATTTTGAGAAATCAACCAAGAATCAATGGGAGAATACTTCTCTCTGAGCCTCATGTTTTGTCTACTATCAACTATTATGACAAGCATCAATTAACAAGAGGACATAGTATAGGCATAAGTACCGCTGATACAATAAAGTCAGTTACTAAAATAAGAATGTCACAAGCAAAAACACTCTTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAGTGAAATTCAGCCATCAATACTAAAGCCTGATGTAACGGCGCCCGGTGTGAACATACTTGCAGCCTATTCATTGTTTGCAAGTGCATCTAACTTACCAACAGACAATCGTCGAGGTTTCCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGGACTGCTGGATTAATCAAAACACTTCATCTGAATTGGAGTCCTGCGGCTATTAAATCAGCTATCATGACCACCGCAACCACAAGAGATAACACCAACAAGCCTATAAGTGATGCATTCGAAAACACAACTGCAAATCCATTTGCTTATGGTTCAGGACATATTCAACCCAACAGTGCAATGGACCCAGGACTTGTTTATGACCTAGGGATTAAGGATTACTTGAACTTCTTATGTGCTTCTGGATACAACCAACAACTCATTTCAGCACTTAATTTCAACATGACATTTACTTGTTCAGGAACTCATAGCATAGATGACTTGAATTATCCTTCAATCACATTACCAAATATTGGTTTAAATGTTGTTAATGTCACTCGTATAGTCACCAATGTTGGGCCACCAAGTACATATTTTGCAAAAGTCCAATTGCCTGGATATAAAATTGCTGTTGTACCAAGTTCCTTGAATTTCAAGAAAATAGGTGAAAAGAAGAAATTTCAAGTTATTGTGCAAGCAACAAGTGTGACTCCAAGGGGAAAATACCAATTTGGAGAACTGCAATGGACAAATGGAAAGCATATTGTAAGGAGTCCCATTACTGTTCAACGCAAATGA

Protein sequence

>Msa1156670

MTSAASDDAASDDTASDDAASGLLCYIVYLGAHSHGPTPSSIDLETATSSHYDLLGSILGSKENAKEAIIYSYNKQINGFAAILEEEEAAQIAKNPKVVSVFLSKEHKLHTTRSWEFLGLSTNDINSAWQKGRFGENTIIANIDSGVWPESKSFSDRGIGPIPAKWRGGNICQINKLKGSKKLPCNRKLIGARFFNKAYERDNGKLPRSQQTARDFVGHGTHTLSTACGNFVPGASIFGIGNGTVKGGSPRARVATYKVCWSQSAICYSADILAAIEQAISDGVDIISLSLGSSTITDSQGILKDMISIGAFHALARNILLVASAGNDGPTPGSVTNVAPWVFTVAASTIDRDFSSIMTIGNKTVTGASLFVNLPPNQSFTLVDSTDVKFTNVTNRDARFCRPGTLDPSKASGKIVACVREGEITSNTLTSGVLFGYQYPRKEFSISSVAQGQEAKSARAKGVILRNQPRINGRILLSEPHVLSTINYYDKHQLTRGHSIGISTADTIKSVTKIRMSQAKTLFGRKPAPVMASYSSRGPSEIQPSILKPDVTAPGVNILAAYSLFASASNLPTDNRRGFPFNVMQGTSMSCPHVAGTAGLIKTLHLNWSPAAIKSAIMTTATTRDNTNKPISDAFENTTANPFAYGSGHIQPNSAMDPGLVYDLGIKDYLNFLCASGYNQQLISALNFNMTFTCSGTHSIDDLNYPSITLPNIGLNVVNVTRIVTNVGPPSTYFAKVQLPGYKIAVVPSSLNFKKIGEKKKFQVIVQATSVTPRGKYQFGELQWTNGKHIVRSPITVQRK*