AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0627360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0627360 MtrunA17_Chr4g0003411 98.762 808 10 0 1 808 1 808 0.0 1665
Msa0627360 MtrunA17_Chr2g0333021 85.167 809 119 1 1 808 1 809 0.0 1452
Msa0627360 MtrunA17_Chr3g0137821 64.140 831 266 11 1 808 1 822 0.0 1082
Msa0627360 MtrunA17_Chr3g0137791 63.341 832 266 10 6 808 5 826 0.0 1070
Msa0627360 MtrunA17_Chr7g0246481 46.303 825 389 17 6 796 299 1103 0.0 726
Msa0627360 MtrunA17_Chr8g0350951 47.296 795 381 15 26 796 258 1038 0.0 721
Msa0627360 MtrunA17_Chr5g0398161 47.594 769 366 14 50 796 90 843 0.0 719
Msa0627360 MtrunA17_Chr5g0398171 45.421 819 400 17 6 796 38 837 0.0 711
Msa0627360 MtrunA17_Chr5g0406161 45.963 805 371 14 50 808 86 872 0.0 706
Msa0627360 MtrunA17_Chr8g0380631 47.177 797 364 17 50 808 72 849 0.0 699
Msa0627360 MtrunA17_Chr3g0143471 45.936 812 368 20 50 808 73 866 0.0 682
Msa0627360 MtrunA17_Chr2g0330431 42.222 810 403 19 6 808 5 756 0.0 613
Msa0627360 MtrunA17_Chr8g0341931 41.430 811 402 20 6 808 8 753 0.0 590
Msa0627360 MtrunA17_Chr5g0406151 54.930 71 29 1 320 390 12 79 2.24e-22 92.0
Msa0627360 MtrunA17_Chr1g0192401 32.636 239 124 10 497 725 733 944 4.70e-21 99.4
Msa0627360 MtrunA17_Chr1g0192401 29.825 228 118 10 211 426 362 559 7.85e-16 82.4
Msa0627360 MtrunA17_Chr2g0295411 30.924 249 132 9 456 692 736 956 2.37e-18 90.5
Msa0627360 MtrunA17_Chr2g0295411 27.039 233 119 8 211 426 388 586 7.77e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0627360 AT3G15730.1 81.728 810 146 2 1 808 1 810 0.0 1420
Msa0627360 AT1G52570.1 81.358 810 149 2 1 808 1 810 0.0 1412
Msa0627360 AT1G52570.3 81.358 810 149 2 1 808 1 810 0.0 1412
Msa0627360 AT1G52570.2 81.358 810 149 2 1 808 1 810 0.0 1412
Msa0627360 AT5G25370.1 61.576 825 290 10 3 808 4 820 0.0 1035
Msa0627360 AT5G25370.3 61.576 825 290 10 3 808 4 820 0.0 1035
Msa0627360 AT5G25370.2 61.576 825 290 10 3 808 4 820 0.0 1035
Msa0627360 AT5G25370.4 64.334 743 257 6 72 808 5 745 0.0 1000
Msa0627360 AT2G42010.1 45.510 824 394 17 6 796 271 1072 0.0 729
Msa0627360 AT2G42010.2 44.444 846 396 17 6 796 271 1097 0.0 723
Msa0627360 AT4G00240.3 46.545 767 377 13 50 796 11 764 0.0 715
Msa0627360 AT4G11840.1 45.157 826 404 15 6 796 44 855 0.0 714
Msa0627360 AT4G00240.1 45.512 791 393 14 26 796 144 916 0.0 714
Msa0627360 AT4G00240.2 46.545 767 377 13 50 796 128 881 0.0 714
Msa0627360 AT4G11830.2 44.928 828 403 15 6 796 34 845 0.0 714
Msa0627360 AT4G11830.1 46.323 775 372 13 50 796 55 813 0.0 712
Msa0627360 AT4G11850.1 45.200 823 404 16 6 796 40 847 0.0 703
Msa0627360 AT4G11840.2 44.606 825 380 15 6 796 44 825 0.0 693
Msa0627360 AT4G35790.2 46.491 798 368 17 50 808 80 857 0.0 677
Msa0627360 AT4G35790.1 46.106 809 366 18 50 808 80 868 0.0 670
Msa0627360 AT1G55180.2 40.678 767 402 17 50 808 19 740 0.0 586
Msa0627360 AT1G55180.1 39.286 812 427 18 5 808 9 762 0.0 585
Msa0627360 AT4G35790.3 46.242 612 282 12 50 626 80 679 1.09e-173 517
Msa0627360 AT4G11830.4 43.669 616 307 11 6 596 34 634 2.99e-169 503
Msa0627360 AT4G11830.3 43.907 599 296 11 6 579 34 617 9.30e-165 492
Msa0627360 AT3G05630.1 30.932 236 126 8 499 724 714 922 3.56e-20 96.7
Msa0627360 AT3G05630.1 27.329 322 155 14 131 426 304 572 3.07e-15 80.9
Msa0627360 AT3G16785.6 32.283 254 122 11 456 692 710 930 3.48e-19 93.6
Msa0627360 AT3G16785.6 30.942 223 104 9 220 426 389 577 1.26e-15 82.0
Msa0627360 AT3G16785.5 32.283 254 122 11 456 692 710 930 3.48e-19 93.6
Msa0627360 AT3G16785.5 30.942 223 104 9 220 426 389 577 1.26e-15 82.0
Msa0627360 AT3G16785.4 32.283 254 122 11 456 692 710 930 3.84e-19 93.6
Msa0627360 AT3G16785.4 30.942 223 104 9 220 426 389 577 1.24e-15 82.0
Msa0627360 AT3G16785.1 32.283 254 122 11 456 692 710 930 3.86e-19 93.6
Msa0627360 AT3G16785.1 30.942 223 104 9 220 426 389 577 1.30e-15 82.0
Msa0627360 AT3G16785.3 32.283 254 122 11 456 692 710 930 3.87e-19 93.6
Msa0627360 AT3G16785.3 30.942 223 104 9 220 426 389 577 1.18e-15 82.0
Msa0627360 AT3G16785.2 32.283 254 122 11 456 692 710 930 3.87e-19 93.6
Msa0627360 AT3G16785.2 30.942 223 104 9 220 426 389 577 1.18e-15 82.0

Find 242 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAGGTGGGTGGAAATTT+TGG 0.132980 4_3:-7424320 Msa0627360:CDS
GCTTGAACCGATGCACTTTC+TGG 0.151448 4_3:+7422954 None:intergenic
ATTGATGGTGGGGCTGCTTT+TGG 0.174765 4_3:-7423281 Msa0627360:CDS
AGGAAGATGAAGAGAATAAA+AGG 0.186748 4_3:+7426106 None:intergenic
GCAGCATCTTCAGGAGTTTC+TGG 0.186898 4_3:+7423254 None:intergenic
ATCGGTTGGTTTGTTGAAAA+AGG 0.188851 4_3:-7423855 Msa0627360:CDS
CGTTCTTCTGCCTCGGTAAT+CGG 0.218124 4_3:-7422830 Msa0627360:CDS
TCCATCCCCGGTAACATTTC+CGG 0.219913 4_3:-7423342 Msa0627360:CDS
ATCCCTAAAATACCACTTTC+TGG 0.238358 4_3:-7424103 Msa0627360:CDS
TCGCTCCGTCCATTGATCTT+TGG 0.259842 4_3:+7422533 None:intergenic
TTTCCTTGGTGAGGGATTCT+AGG 0.266899 4_3:-7423976 Msa0627360:CDS
ACCAGATTGCTGACAAATAT+TGG 0.280067 4_3:-7422342 Msa0627360:CDS
CCTATCCTCACTACTTAGTT+TGG 0.297118 4_3:-7422157 Msa0627360:exon
CCAGCTCTCGCAGCATCTTC+AGG 0.308289 4_3:+7423245 None:intergenic
AAAAGTCTAGTGAAGGTGTT+AGG 0.315711 4_3:-7423907 Msa0627360:CDS
ACTCTATGCTACCATTGATT+TGG 0.326580 4_3:-7424539 Msa0627360:CDS
ACCGCCATCATCAGGATTGC+GGG 0.327108 4_3:+7423757 None:intergenic
CCTGTTGGAGCAACTTTAAT+CGG 0.329996 4_3:-7424388 Msa0627360:CDS
TCACTTGAGCACGACCTTCC+TGG 0.343592 4_3:-7422301 Msa0627360:CDS
TTGTCACACTGCACTCTTCT+CGG 0.347204 4_3:-7426152 Msa0627360:five_prime_UTR
GTGAAAAGACTCGTACCATT+TGG 0.347746 4_3:+7424465 None:intergenic
ATCTTAAGTGAAAGTTCCTT+TGG 0.350014 4_3:+7423047 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 4_3:+7422341 None:intergenic
ATCCCTCACCAAGGAAATTT+CGG 0.354270 4_3:+7423982 None:intergenic
TTTCATCAACCTAACTTTCC+AGG 0.354896 4_3:-7423533 Msa0627360:CDS
GACACCAAGGCTCGGATTCT+CGG 0.360309 4_3:-7422202 Msa0627360:CDS
TGCATCGGTTCAAGCAATAT+TGG 0.369787 4_3:-7422946 Msa0627360:CDS
CTCTGTGAGAAGAAAGTATA+CGG 0.369951 4_3:+7424178 None:intergenic
AACAATGGAGATGATGTATA+AGG 0.370041 4_3:-7422910 Msa0627360:CDS
TCACATTTACTGTGCTCATA+TGG 0.370819 4_3:-7424446 Msa0627360:CDS
GGCACACCCTCTGGCCACAT+TGG 0.375949 4_3:+7422975 None:intergenic
TGAAAAGACTCGTACCATTT+GGG 0.379443 4_3:+7424466 None:intergenic
ATGCTTATATTAATGCTATT+CGG 0.380918 4_3:-7423178 Msa0627360:CDS
CCGATTAAAGTTGCTCCAAC+AGG 0.380987 4_3:+7424388 None:intergenic
TCGTAATCTGAATCAGGTTC+TGG 0.383287 4_3:+7422768 None:intergenic
TTCTAGGAGGCCAAAGGCTG+GGG 0.387473 4_3:-7423960 Msa0627360:CDS
GCCTTGAAGGACCGATCGCT+TGG 0.387667 4_3:-7423457 Msa0627360:CDS
CTGGCTGTCTTGCAGCTAAA+TGG 0.393197 4_3:+7422473 None:intergenic
ATTGAGGAAACTGTTGGTCT+TGG 0.395386 4_3:-7424577 Msa0627360:CDS
TGTCCACAACCACAATCTTC+TGG 0.398916 4_3:+7423690 None:intergenic
ATGTCACGAAAGACCGCAGC+TGG 0.399882 4_3:-7424237 Msa0627360:CDS
AGAATCCGAGCCTTGGTGTC+GGG 0.406985 4_3:+7422205 None:intergenic
GTTCTTCTGCCTCGGTAATC+GGG 0.408625 4_3:-7422829 Msa0627360:CDS
CAGCATCTTCAGGAGTTTCT+GGG 0.410189 4_3:+7423255 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 4_3:+7423077 None:intergenic
ATTGCAGCACCTGGAAAGTT+AGG 0.413190 4_3:+7423524 None:intergenic
AAACTTACCTATCATCATCT+TGG 0.413744 4_3:+7422704 None:intergenic
TGATGGCGGTAGCATCATTC+AGG 0.414188 4_3:-7423744 Msa0627360:CDS
CCTGAAGATGCTGCGAGAGC+TGG 0.415758 4_3:-7423245 Msa0627360:CDS
ATTCAAAGCGCTAAATTTCC+TGG 0.415896 4_3:-7424205 Msa0627360:CDS
GATGTATAAGGATATCGTTC+TGG 0.416806 4_3:-7422898 Msa0627360:CDS
GCACACCCTCTGGCCACATT+GGG 0.418035 4_3:+7422976 None:intergenic
ATGGCACAAATTCATCTTCA+TGG 0.419518 4_3:-7425686 Msa0627360:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 4_3:-7422341 Msa0627360:CDS
GCACTTTCTGGCACACCCTC+TGG 0.420063 4_3:+7422966 None:intergenic
TGATCATCCGGAAATGTTAC+CGG 0.420713 4_3:+7423335 None:intergenic
CAGCAATCTGGTTCACCTTA+CGG 0.421232 4_3:+7422353 None:intergenic
TTCACATTCTCTTCAAAACT+TGG 0.423563 4_3:-7426082 Msa0627360:intron
TTCCATGTCTCGTGATCATC+CGG 0.424135 4_3:+7423323 None:intergenic
ATTGAAAATCAGTATTTCCT+TGG 0.426891 4_3:-7423134 Msa0627360:CDS
TTAACTGCTATGACTTTAGC+TGG 0.427079 4_3:-7421967 Msa0627360:three_prime_UTR
CATGAAACGTCGGGACTGTT+GGG 0.428061 4_3:+7422740 None:intergenic
CAGCTGTTTAGATCTATTGA+TGG 0.430877 4_3:-7423296 Msa0627360:CDS
GTTCATACCAAGATGATGAT+AGG 0.435880 4_3:-7422711 Msa0627360:intron
TCTTCGAACCCTCTTGTATC+GGG 0.436117 4_3:+7424284 None:intergenic
CGCTTATCCGACCTTCCACC+AGG 0.436478 4_3:+7423659 None:intergenic
GGAAGATGAAGAGAATAAAA+GGG 0.437664 4_3:+7426107 None:intergenic
TCCGGAAATGTTACCGGGGA+TGG 0.438701 4_3:+7423341 None:intergenic
AGCTAAATGGTAGGGCTGAT+AGG 0.439308 4_3:+7422486 None:intergenic
TCTTAAGTGAAAGTTCCTTT+GGG 0.441263 4_3:+7423048 None:intergenic
TGTTTAGATCTATTGATGGT+GGG 0.446034 4_3:-7423292 Msa0627360:CDS
TCATGAAACGTCGGGACTGT+TGG 0.446105 4_3:+7422739 None:intergenic
CTGTCTTGCAGCTAAATGGT+AGG 0.447434 4_3:+7422477 None:intergenic
GACATTCATTCCCGCCTTGA+AGG 0.449178 4_3:-7423470 Msa0627360:CDS
TTCAAAGTTCAAACCACAAA+TGG 0.450978 4_3:+7422069 None:intergenic
GTGACAAAACAATGGATCAT+AGG 0.451368 4_3:+7426168 None:intergenic
ATCTTCGAACCCTCTTGTAT+CGG 0.455754 4_3:+7424283 None:intergenic
AAACACATGATATACATTAC+CGG 0.460467 4_3:-7424019 Msa0627360:CDS
TGGTAATGAAAACAAAGATT+AGG 0.461452 4_3:+7422089 None:intergenic
AAAGTCTAGTGAAGGTGTTA+GGG 0.463222 4_3:-7423906 Msa0627360:CDS
GAAACCGCACAGTTCTTTGA+AGG 0.467829 4_3:-7423806 Msa0627360:CDS
GATTCTAGGAGGCCAAAGGC+TGG 0.467985 4_3:-7423962 Msa0627360:CDS
GCCGCCGAGAATCCGAGCCT+TGG 0.470752 4_3:+7422198 None:intergenic
TGTTTATACCGAAATTTCCT+TGG 0.471207 4_3:-7423990 Msa0627360:CDS
TATCCGGCACATGAGAATCT+TGG 0.471426 4_3:+7424131 None:intergenic
ATGATGCTACCGCCATCATC+AGG 0.471464 4_3:+7423749 None:intergenic
GCGAGAGCTGGGCTTATTAG+TGG 0.471776 4_3:-7423233 Msa0627360:CDS
CACTTGCTTCGCTATCCGAT+TGG 0.472419 4_3:-7422277 Msa0627360:CDS
TCACCAGAAGATTGTGGTTG+TGG 0.472585 4_3:-7423693 Msa0627360:CDS
GCTCTCTCGTAATCTGAATC+AGG 0.473696 4_3:+7422762 None:intergenic
AAGCTTAATGCTGGTGGTGG+TGG 0.475675 4_3:-7425632 Msa0627360:CDS
TTCGGTATAAACAGACCAAC+CGG 0.477585 4_3:+7424000 None:intergenic
AACTAAGTAGTGAGGATAGG+AGG 0.480878 4_3:+7422160 None:intergenic
ATTCTAGGAGGCCAAAGGCT+GGG 0.483116 4_3:-7423961 Msa0627360:CDS
CTGAAGATGCTGCGAGAGCT+GGG 0.483144 4_3:-7423244 Msa0627360:CDS
TTATGAGCCTCATCGGTGTT+GGG 0.483969 4_3:-7424071 Msa0627360:CDS
CCTTGAAGGACCGATCGCTT+GGG 0.484290 4_3:-7423456 Msa0627360:CDS
CTCACAGAGGAAAGGATGTA+AGG 0.488198 4_3:-7424164 Msa0627360:CDS
CTTATGAGCCTCATCGGTGT+TGG 0.488671 4_3:-7424072 Msa0627360:CDS
CCCAAGCGATCGGTCCTTCA+AGG 0.490151 4_3:+7423456 None:intergenic
TTACCAAGATTCTCATGTGC+CGG 0.490601 4_3:-7424134 Msa0627360:CDS
TCAGGTTCTGGTTGTTCAGA+AGG 0.491713 4_3:+7422780 None:intergenic
GGAGATGTCACACAGCTGCC+TGG 0.492596 4_3:-7422241 Msa0627360:CDS
CCAGGTGCTGCAATCACAAA+AGG 0.496013 4_3:-7423515 Msa0627360:CDS
CCATTCAAGACCTCCTCGAC+AGG 0.496478 4_3:+7424352 None:intergenic
CATTGATCTTTGGTTGATGT+TGG 0.498653 4_3:+7422543 None:intergenic
TACCGAAATTTCCTTGGTGA+GGG 0.498969 4_3:-7423984 Msa0627360:CDS
TTCTATTATTCCTCCATCCC+CGG 0.504693 4_3:-7423354 Msa0627360:CDS
CTGTTTAGATCTATTGATGG+TGG 0.506397 4_3:-7423293 Msa0627360:CDS
ATTATGAGTAAGATTGAAGC+CGG 0.506694 4_3:-7423026 Msa0627360:CDS
CAATCACAAAAGGCGGTCCA+AGG 0.512335 4_3:-7423505 Msa0627360:CDS
AGGATATCGTTCTGGCACTC+AGG 0.513143 4_3:-7422890 Msa0627360:CDS
CGTTCTGGCACTCAGGGCAA+AGG 0.513948 4_3:-7422883 Msa0627360:CDS
CCTTCACTAGCAACTCCAAT+CGG 0.513962 4_3:+7422262 None:intergenic
GAAACTGTTGGTCTTGGAAA+GGG 0.514436 4_3:-7424571 Msa0627360:CDS
GATCATCCGGAAATGTTACC+GGG 0.516686 4_3:+7423336 None:intergenic
TGGTGAGGAAATTGATAGGT+GGG 0.528326 4_3:-7424332 Msa0627360:CDS
AAGCAATATTGGACTGGCAG+AGG 0.531832 4_3:-7422935 Msa0627360:CDS
AACATAGATCATGAAACGTC+GGG 0.533395 4_3:+7422731 None:intergenic
ATGTCATGCCAAGGTTCCCT+TGG 0.535392 4_3:+7423488 None:intergenic
AGCGATCGGTCCTTCAAGGC+GGG 0.535565 4_3:+7423460 None:intergenic
GAGAATCCGAGCCTTGGTGT+CGG 0.538506 4_3:+7422204 None:intergenic
TCCAAGCAAAAGAGCTTCCA+AGG 0.539099 4_3:+7423117 None:intergenic
TAAGTCTTGCCACCAGAAAG+TGG 0.539707 4_3:+7424091 None:intergenic
CCATGGACTTGACCACGTGC+TGG 0.539957 4_3:+7422454 None:intergenic
TATTTGACGTTCTTCTGCCT+CGG 0.540130 4_3:-7422837 Msa0627360:CDS
AAGAAAGTATACGGAACTCC+AGG 0.540377 4_3:+7424187 None:intergenic
GTTTAGATCTATTGATGGTG+GGG 0.540703 4_3:-7423291 Msa0627360:CDS
CAAAATATTGCAGCTTCACA+TGG 0.543780 4_3:+7424260 None:intergenic
TCTTGCCTTCTCCAAATCAA+TGG 0.546831 4_3:+7424528 None:intergenic
TGATTTGGAGAAGGCAAGAG+TGG 0.552030 4_3:-7424524 Msa0627360:CDS
AAGGCGGTCCAAGGGAACCT+TGG 0.552221 4_3:-7423496 Msa0627360:CDS
GTGAAAGATGATAATCCTGT+TGG 0.552822 4_3:-7424403 Msa0627360:CDS
CCAGCACGTGGTCAAGTCCA+TGG 0.552842 4_3:-7422454 Msa0627360:CDS
ATGAGCATACTAATCCCAAA+TGG 0.553693 4_3:-7424480 Msa0627360:CDS
GTTCTGGCACTCAGGGCAAA+GGG 0.553846 4_3:-7422882 Msa0627360:CDS
TGCTACCATTGATTTGGAGA+AGG 0.554396 4_3:-7424533 Msa0627360:CDS
CAAAACATTGAGGAAACTGT+TGG 0.557099 4_3:-7424583 Msa0627360:CDS
GGAAACTGTTGGTCTTGGAA+AGG 0.558000 4_3:-7424572 Msa0627360:CDS
CCAAACTAAGTAGTGAGGAT+AGG 0.559043 4_3:+7422157 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.560182 4_3:-7422542 Msa0627360:CDS
TGAATGGTGAGGAAATTGAT+AGG 0.560352 4_3:-7424336 Msa0627360:CDS
TTCCGGATGATCACGAGACA+TGG 0.561317 4_3:-7423325 Msa0627360:CDS
GATATTAAGCCTGAAGACAT+TGG 0.562253 4_3:-7423086 Msa0627360:CDS
GGATATCGTTCTGGCACTCA+GGG 0.562290 4_3:-7422889 Msa0627360:CDS
TCTTCATGCTACTATCTATG+AGG 0.563357 4_3:-7425660 Msa0627360:CDS
GATGACGAATACATAATCGT+TGG 0.564804 4_3:-7422571 Msa0627360:CDS
ATACCGAAATTTCCTTGGTG+AGG 0.565309 4_3:-7423985 Msa0627360:CDS
AACGATGGAGGAAGCAAGGT+GGG 0.565356 4_3:-7423412 Msa0627360:CDS
AAAGACCGCAGCTGGGCTCG+AGG 0.565566 4_3:-7424229 Msa0627360:CDS
CGGTTCAAGCAATATTGGAC+TGG 0.566255 4_3:-7422941 Msa0627360:CDS
TTATGAGTAAGATTGAAGCC+GGG 0.567721 4_3:-7423025 Msa0627360:CDS
AAGTAGTGAGGATAGGAGGG+AGG 0.571376 4_3:+7422164 None:intergenic
TGGGATGATAGAACATCGGT+TGG 0.573109 4_3:-7423869 Msa0627360:CDS
TGTCTTGCAGCTAAATGGTA+GGG 0.573776 4_3:+7422478 None:intergenic
CCGCCATCATCAGGATTGCG+GGG 0.573969 4_3:+7423758 None:intergenic
ACTTTCTTCTCACAGAGGAA+AGG 0.574250 4_3:-7424172 Msa0627360:CDS
TACTCATCACCAGAAGATTG+TGG 0.574698 4_3:-7423699 Msa0627360:CDS
GATAAGCTTAATGCTGGTGG+TGG 0.575966 4_3:-7425635 Msa0627360:CDS
GAATGCCTCGAGCCCAGCTG+CGG 0.576491 4_3:+7424224 None:intergenic
TACCGCCATCATCAGGATTG+CGG 0.579693 4_3:+7423756 None:intergenic
GGATTTACTTGTCTCTCTGA+GGG 0.579805 4_3:-7423387 Msa0627360:CDS
ACTAAGTAGTGAGGATAGGA+GGG 0.580152 4_3:+7422161 None:intergenic
GGATAGCGAAGCAAGTGTCC+AGG 0.581630 4_3:+7422283 None:intergenic
CCTGTCGAGGAGGTCTTGAA+TGG 0.582151 4_3:-7424352 Msa0627360:CDS
AGCTGGGCTTATTAGTGGAA+AGG 0.583055 4_3:-7423228 Msa0627360:CDS
TGCTTTGCATCTCATCCCAA+AGG 0.583132 4_3:-7423063 Msa0627360:CDS
GAATCCGAGCCTTGGTGTCG+GGG 0.583277 4_3:+7422206 None:intergenic
GCAAGACTTATGAGCCTCAT+CGG 0.583714 4_3:-7424078 Msa0627360:CDS
TAGGTTGATGAAAATCATCA+TGG 0.587769 4_3:+7423543 None:intergenic
ACAGATCAGGCAAAACATTG+AGG 0.589416 4_3:-7424593 Msa0627360:intron
AAAGATCAATGGACGGAGCG+AGG 0.593749 4_3:-7422531 Msa0627360:CDS
GAGGGACTCTGAGATAGCGA+TGG 0.594266 4_3:-7422512 Msa0627360:CDS
ATGGAGGAAGCAAGGTGGGA+AGG 0.595810 4_3:-7423408 Msa0627360:CDS
GGAAATGTTACCGGGGATGG+AGG 0.599535 4_3:+7423344 None:intergenic
AGGGACTCTGAGATAGCGAT+GGG 0.600455 4_3:-7422511 Msa0627360:CDS
AGGATTTACTTGTCTCTCTG+AGG 0.601222 4_3:-7423388 Msa0627360:CDS
GAGGTTGATAAGCTTAATGC+TGG 0.603431 4_3:-7425641 Msa0627360:CDS
AAATCAAGAATGTATCCGTA+AGG 0.604233 4_3:-7422368 Msa0627360:CDS
ACATGATATACATTACCGGT+TGG 0.606826 4_3:-7424015 Msa0627360:CDS
CCGATTGGAGTTGCTAGTGA+AGG 0.611060 4_3:-7422262 Msa0627360:CDS
TATGAGTAAGATTGAAGCCG+GGG 0.612358 4_3:-7423024 Msa0627360:CDS
CCTTGGTGAGGGATTCTAGG+AGG 0.613168 4_3:-7423973 Msa0627360:CDS
AAGATCAATGGACGGAGCGA+GGG 0.613208 4_3:-7422530 Msa0627360:CDS
TGTTTAACTTTGAGCAACGA+TGG 0.613445 4_3:-7423427 Msa0627360:CDS
CGGGAATGAATGTCATGCCA+AGG 0.614171 4_3:+7423479 None:intergenic
AACAACACATCCCAAGCGAT+CGG 0.615121 4_3:+7423446 None:intergenic
GATTTGGAGAAGGCAAGAGT+GGG 0.615789 4_3:-7424523 Msa0627360:CDS
AATCACAAAAGGCGGTCCAA+GGG 0.616469 4_3:-7423504 Msa0627360:CDS
TGGTGGAAATTTCCTCAGCA+TGG 0.616523 4_3:-7425615 Msa0627360:intron
GAGCAACGATGGAGGAAGCA+AGG 0.617826 4_3:-7423416 Msa0627360:CDS
TGAATTACCTGGTGGAAGGT+CGG 0.619368 4_3:-7423666 Msa0627360:CDS
CGCCATCATCAGGATTGCGG+GGG 0.619690 4_3:+7423759 None:intergenic
TGGAGAAGGCAAGAGTGGGA+AGG 0.621315 4_3:-7424519 Msa0627360:CDS
AGGGAATCGAGGAAGATCCT+CGG 0.622355 4_3:-7422863 Msa0627360:CDS
TCTAGGAGGCCAAAGGCTGG+GGG 0.624607 4_3:-7423959 Msa0627360:CDS
AGCATATGTGCCTGTCGAGG+AGG 0.627896 4_3:-7424362 Msa0627360:CDS
GAACATAGATCATGAAACGT+CGG 0.633210 4_3:+7422730 None:intergenic
TGTTGTCCCAATGTGGCCAG+AGG 0.634138 4_3:-7422982 Msa0627360:CDS
GAGGGATTCTAGGAGGCCAA+AGG 0.637811 4_3:-7423966 Msa0627360:CDS
CTTCTGGTGATGAGTAAACA+TGG 0.641961 4_3:+7423706 None:intergenic
CGAGGAGGTCTTGAATGGTG+AGG 0.642464 4_3:-7424347 Msa0627360:CDS
TGAGGAAATTGATAGGTGGG+TGG 0.645001 4_3:-7424329 Msa0627360:CDS
GCATTATGGTATGAGCACCT+TGG 0.646788 4_3:-7422421 Msa0627360:CDS
TGAGCCTCATCGGTGTTGGG+AGG 0.651132 4_3:-7424068 Msa0627360:CDS
AGGAGTCATGAAGCATGCCA+AGG 0.651697 4_3:+7422404 None:intergenic
GTTGTCCCAATGTGGCCAGA+GGG 0.653005 4_3:-7422981 Msa0627360:CDS
AAGAGCATATGTGCCTGTCG+AGG 0.653021 4_3:-7424365 Msa0627360:CDS
AATCGGGAAGTAAAGAAACA+AGG 0.653307 4_3:-7422813 Msa0627360:CDS
TATCATATCTTCCATCACAA+AGG 0.653464 4_3:+7423606 None:intergenic
ATCAACCAAAGATCAATGGA+CGG 0.654662 4_3:-7422538 Msa0627360:CDS
CGTATACTTTCTTCTCACAG+AGG 0.655571 4_3:-7424177 Msa0627360:CDS
AGCGAAGCAAGTGTCCAGGA+AGG 0.657401 4_3:+7422287 None:intergenic
AGTGCAGTGTGACAAAACAA+TGG 0.657589 4_3:+7426160 None:intergenic
GGGTGTGCCAGAAAGTGCAT+CGG 0.660670 4_3:-7422961 Msa0627360:CDS
AATAAAACAGTACCATGCTG+AGG 0.661732 4_3:+7425603 None:intergenic
ACAGTGAATTACCTGGTGGA+AGG 0.662406 4_3:-7423670 Msa0627360:CDS
CAACGATGGAGGAAGCAAGG+TGG 0.668752 4_3:-7423413 Msa0627360:CDS
AAGAACGTCAAATAATTCCG+AGG 0.670151 4_3:+7422846 None:intergenic
AAGCGATCGGTCCTTCAAGG+CGG 0.671322 4_3:+7423459 None:intergenic
GGTGCTGCAATCACAAAAGG+CGG 0.672665 4_3:-7423512 Msa0627360:CDS
ACTCAGGGCAAAGGGAATCG+AGG 0.672681 4_3:-7422874 Msa0627360:CDS
ATGGTGAGGAAATTGATAGG+TGG 0.675988 4_3:-7424333 Msa0627360:CDS
CCCCGCAATCCTGATGATGG+CGG 0.678364 4_3:-7423758 Msa0627360:CDS
TCTTTACTTCCCGATTACCG+AGG 0.680953 4_3:+7422820 None:intergenic
ATATCCTCCCAACACCGATG+AGG 0.682280 4_3:+7424064 None:intergenic
TGTTTGGGATGATAGAACAT+CGG 0.683265 4_3:-7423873 Msa0627360:CDS
TGTACGTTGTTGTCCCAATG+TGG 0.686098 4_3:-7422989 Msa0627360:CDS
GCTGCAAGACAGCCAGCACG+TGG 0.687862 4_3:-7422466 Msa0627360:CDS
TGTCACGAAAGACCGCAGCT+GGG 0.688731 4_3:-7424236 Msa0627360:CDS
GTTGATAAGCTTAATGCTGG+TGG 0.689428 4_3:-7425638 Msa0627360:CDS
ACCAAGGCTCGGATTCTCGG+CGG 0.691037 4_3:-7422199 Msa0627360:CDS
ATAATGCCATGCGAAAACCA+TGG 0.691651 4_3:+7422437 None:intergenic
CCTAAAATACCACTTTCTGG+TGG 0.698637 4_3:-7424100 Msa0627360:CDS
GTTGTGGACAGTGAATTACC+TGG 0.700680 4_3:-7423677 Msa0627360:CDS
ATCATCCGGAAATGTTACCG+GGG 0.705073 4_3:+7423337 None:intergenic
TTAACTTTGAGCAACGATGG+AGG 0.710551 4_3:-7423424 Msa0627360:CDS
CCTCCTAGAATCCCTCACCA+AGG 0.715713 4_3:+7423973 None:intergenic
GGACTGGCAGAGGAGAACAA+TGG 0.727822 4_3:-7422925 Msa0627360:CDS
AGTACCTTCAAAGAACTGTG+CGG 0.748352 4_3:+7423802 None:intergenic
CTGGTGATGAGTAAACATGG+TGG 0.787330 4_3:+7423709 None:intergenic
GTGGACAGTGAATTACCTGG+TGG 0.811877 4_3:-7423674 Msa0627360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTATTTTTTTAAAATT+CGG + chr4_3:7422370-7422389 None:intergenic 0.0%
!!! CAAAAAGTTTTTTTTTTTTA+TGG - chr4_3:7422408-7422427 Msa0627360:CDS 10.0%
!!! ACTGTTTTATTTAATTATTT+TGG - chr4_3:7422574-7422593 Msa0627360:CDS 10.0%
!!! ATTTTTAGATTTCATGTTTT+TGG - chr4_3:7422623-7422642 Msa0627360:intron 15.0%
!!! AAAAAAAAAGAATATTTTGG+TGG - chr4_3:7422704-7422723 Msa0627360:intron 15.0%
!! TAAGTATAAGCAAATAAATA+GGG + chr4_3:7423551-7423570 None:intergenic 15.0%
!! ATAAGTATAAGCAAATAAAT+AGG + chr4_3:7423552-7423571 None:intergenic 15.0%
!!! TTTTTAAACAGAGGAAAATA+AGG + chr4_3:7421960-7421979 None:intergenic 20.0%
!!! TTTAATTATTTTGGCCTATT+TGG - chr4_3:7422583-7422602 Msa0627360:intron 20.0%
!! TAATATTGACAATTAACCAA+CGG + chr4_3:7422947-7422966 None:intergenic 20.0%
!! ATGCTTATATTAATGCTATT+CGG - chr4_3:7424987-7425006 Msa0627360:intron 20.0%
!! AAATTACTGTCATAAATTAC+AGG - chr4_3:7425486-7425505 Msa0627360:intron 20.0%
!! AAATCACAAAAATCTGTATT+TGG + chr4_3:7426171-7426190 None:intergenic 20.0%
! AAAGAGTTAAATCAGATCAA+TGG + chr4_3:7422193-7422212 None:intergenic 25.0%
! TTGAATCATTAGATCCAAAT+AGG + chr4_3:7422600-7422619 None:intergenic 25.0%
!!! AAAAAAGAATATTTTGGTGG+TGG - chr4_3:7422707-7422726 Msa0627360:intron 25.0%
!!! AAAAAGAATATTTTGGTGGT+GGG - chr4_3:7422708-7422727 Msa0627360:intron 25.0%
! AATATTGACAATTAACCAAC+GGG + chr4_3:7422946-7422965 None:intergenic 25.0%
!!! ATATCAGTTTTGTCAAATGT+CGG - chr4_3:7422983-7423002 Msa0627360:CDS 25.0%
! GATAAAGTTAATGGTTATTC+AGG + chr4_3:7423261-7423280 None:intergenic 25.0%
! GATGCATAAGATAAAGTTAA+TGG + chr4_3:7423270-7423289 None:intergenic 25.0%
!!! TAATTTGCTTGATTTAGCTT+TGG + chr4_3:7423429-7423448 None:intergenic 25.0%
! TGTTTATACATACATTGACA+TGG - chr4_3:7423462-7423481 Msa0627360:CDS 25.0%
! AATAGGGTCATTAATAATGA+AGG + chr4_3:7423535-7423554 None:intergenic 25.0%
!!! ATTTTAGGGATGAAATTATC+CGG + chr4_3:7424053-7424072 None:intergenic 25.0%
! AAACACATGATATACATTAC+CGG - chr4_3:7424146-7424165 Msa0627360:CDS 25.0%
! ATTGAAAATCAGTATTTCCT+TGG - chr4_3:7425031-7425050 Msa0627360:intron 25.0%
!! TGGTAATGAAAACAAAGATT+AGG + chr4_3:7426079-7426098 None:intergenic 25.0%
!!! TTTGTTTTCATTACCATTTG+TGG - chr4_3:7426083-7426102 Msa0627360:five_prime_UTR 25.0%
!!! AAGTCTCTGTTTTTAAACAG+AGG + chr4_3:7421969-7421988 None:intergenic 30.0%
GGAAGATGAAGAGAATAAAA+GGG + chr4_3:7422061-7422080 None:intergenic 30.0%
AGGAAGATGAAGAGAATAAA+AGG + chr4_3:7422062-7422081 None:intergenic 30.0%
TTCACATTCTCTTCAAAACT+TGG - chr4_3:7422083-7422102 Msa0627360:three_prime_UTR 30.0%
AGTTAAATCAGATCAATGGT+TGG + chr4_3:7422189-7422208 None:intergenic 30.0%
!! GTTTTGTTCTGACTTTAAGT+AGG - chr4_3:7422306-7422325 Msa0627360:CDS 30.0%
! TGTGATTTGTAGGTGAAAAA+TGG - chr4_3:7422460-7422479 Msa0627360:CDS 30.0%
!!! AAAAGAATATTTTGGTGGTG+GGG - chr4_3:7422709-7422728 Msa0627360:intron 30.0%
AAAGCAAAATCCAATGAGTA+AGG + chr4_3:7423345-7423364 None:intergenic 30.0%
! TTGGATTTTGCTTTCGTTAT+TGG - chr4_3:7423351-7423370 Msa0627360:CDS 30.0%
TACATTGCACATACATACAT+AGG - chr4_3:7423380-7423399 Msa0627360:CDS 30.0%
!! TGATTTAGCTTTGGTTATTC+AGG + chr4_3:7423420-7423439 None:intergenic 30.0%
AAACGCAAAACTAAAGAAAC+TGG + chr4_3:7423502-7423521 None:intergenic 30.0%
TGCTTATACTTATACAGATC+AGG - chr4_3:7423559-7423578 Msa0627360:CDS 30.0%
! GTATATCATGTGTTTTGCAT+TGG + chr4_3:7424141-7424160 None:intergenic 30.0%
TGTTTATACCGAAATTTCCT+TGG - chr4_3:7424175-7424194 Msa0627360:CDS 30.0%
CTAAAGAAAAAGTCTAGTGA+AGG - chr4_3:7424251-7424270 Msa0627360:CDS 30.0%
!!! GAAGAATTGTGAGTTTTGTT+GGG - chr4_3:7424528-7424547 Msa0627360:CDS 30.0%
!!! AAGAATTGTGAGTTTTGTTG+GGG - chr4_3:7424529-7424548 Msa0627360:CDS 30.0%
TATCATATCTTCCATCACAA+AGG + chr4_3:7424562-7424581 None:intergenic 30.0%
!! TAGGTTGATGAAAATCATCA+TGG + chr4_3:7424625-7424644 None:intergenic 30.0%
! TGTTTAGATCTATTGATGGT+GGG - chr4_3:7424873-7424892 Msa0627360:intron 30.0%
TCTTAAGTGAAAGTTCCTTT+GGG + chr4_3:7425120-7425139 None:intergenic 30.0%
ATCTTAAGTGAAAGTTCCTT+TGG + chr4_3:7425121-7425140 None:intergenic 30.0%
ATTATGAGTAAGATTGAAGC+CGG - chr4_3:7425139-7425158 Msa0627360:intron 30.0%
AACAATGGAGATGATGTATA+AGG - chr4_3:7425255-7425274 Msa0627360:intron 30.0%
AAACTTACCTATCATCATCT+TGG + chr4_3:7425464-7425483 None:intergenic 30.0%
! ATTCTTGATTTTCTGGATGA+AGG + chr4_3:7425788-7425807 None:intergenic 30.0%
AAATCAAGAATGTATCCGTA+AGG - chr4_3:7425797-7425816 Msa0627360:intron 30.0%
AAAAACCAAACTAAGTAGTG+AGG + chr4_3:7426016-7426035 None:intergenic 30.0%
TTCAAAGTTCAAACCACAAA+TGG + chr4_3:7426099-7426118 None:intergenic 30.0%
GTGACAAAACAATGGATCAT+AGG + chr4_3:7422000-7422019 None:intergenic 35.0%
!!! GTTTTGAAGAGAATGTGAAG+AGG + chr4_3:7422082-7422101 None:intergenic 35.0%
TTGTGTGATCTGATGAGAAA+TGG - chr4_3:7422432-7422451 Msa0627360:CDS 35.0%
TGTGTGATCTGATGAGAAAT+GGG - chr4_3:7422433-7422452 Msa0627360:CDS 35.0%
ATGGCACAAATTCATCTTCA+TGG - chr4_3:7422479-7422498 Msa0627360:CDS 35.0%
TCTTCATGCTACTATCTATG+AGG - chr4_3:7422505-7422524 Msa0627360:CDS 35.0%
AATAAAACAGTACCATGCTG+AGG + chr4_3:7422565-7422584 None:intergenic 35.0%
CATCTGTTACAAATTAGGCA+TGG + chr4_3:7423044-7423063 None:intergenic 35.0%
! CATGCCTAATTTGTAACAGA+TGG - chr4_3:7423042-7423061 Msa0627360:CDS 35.0%
! CCTAATTTGTAACAGATGGT+GGG - chr4_3:7423046-7423065 Msa0627360:CDS 35.0%
! CTAATTTGTAACAGATGGTG+GGG - chr4_3:7423047-7423066 Msa0627360:CDS 35.0%
! TTTAAGGTGGCTCAAAATGA+CGG - chr4_3:7423079-7423098 Msa0627360:CDS 35.0%
CACAAAGTAGTTTCAATCGA+AGG + chr4_3:7423218-7423237 None:intergenic 35.0%
CAAAACATTGAGGAAACTGT+TGG - chr4_3:7423582-7423601 Msa0627360:CDS 35.0%
! ACTCTATGCTACCATTGATT+TGG - chr4_3:7423626-7423645 Msa0627360:CDS 35.0%
ATGAGCATACTAATCCCAAA+TGG - chr4_3:7423685-7423704 Msa0627360:CDS 35.0%
TGAAAAGACTCGTACCATTT+GGG + chr4_3:7423702-7423721 None:intergenic 35.0%
TCACATTTACTGTGCTCATA+TGG - chr4_3:7423719-7423738 Msa0627360:CDS 35.0%
GTGAAAGATGATAATCCTGT+TGG - chr4_3:7423762-7423781 Msa0627360:CDS 35.0%
TGAATGGTGAGGAAATTGAT+AGG - chr4_3:7423829-7423848 Msa0627360:CDS 35.0%
TGAAAAAAACCCGATACAAG+AGG - chr4_3:7423872-7423891 Msa0627360:CDS 35.0%
GAAAAAAACCCGATACAAGA+GGG - chr4_3:7423873-7423892 Msa0627360:CDS 35.0%
CAAAATATTGCAGCTTCACA+TGG + chr4_3:7423908-7423927 None:intergenic 35.0%
! ATTCAAAGCGCTAAATTTCC+TGG - chr4_3:7423960-7423979 Msa0627360:CDS 35.0%
! CTCTGTGAGAAGAAAGTATA+CGG + chr4_3:7423990-7424009 None:intergenic 35.0%
ATCCCTAAAATACCACTTTC+TGG - chr4_3:7424062-7424081 Msa0627360:CDS 35.0%
! CACCAGAAAGTGGTATTTTA+GGG + chr4_3:7424067-7424086 None:intergenic 35.0%
ACATGATATACATTACCGGT+TGG - chr4_3:7424150-7424169 Msa0627360:CDS 35.0%
!! AAAAGTCTAGTGAAGGTGTT+AGG - chr4_3:7424258-7424277 Msa0627360:CDS 35.0%
!! AAAGTCTAGTGAAGGTGTTA+GGG - chr4_3:7424259-7424278 Msa0627360:CDS 35.0%
!! TTAGGGTTTTGATGCTTGTT+TGG - chr4_3:7424276-7424295 Msa0627360:CDS 35.0%
!! TAGGGTTTTGATGCTTGTTT+GGG - chr4_3:7424277-7424296 Msa0627360:CDS 35.0%
! TGTTTGGGATGATAGAACAT+CGG - chr4_3:7424292-7424311 Msa0627360:CDS 35.0%
!! ATCGGTTGGTTTGTTGAAAA+AGG - chr4_3:7424310-7424329 Msa0627360:CDS 35.0%
!! GTTGGTTTGTTGAAAAAGGA+TGG - chr4_3:7424314-7424333 Msa0627360:CDS 35.0%
!! GTTGAAAAAGGATGGATTGA+TGG - chr4_3:7424322-7424341 Msa0627360:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+TGG - chr4_3:7424527-7424546 Msa0627360:CDS 35.0%
!!! AGAATTGTGAGTTTTGTTGG+GGG - chr4_3:7424530-7424549 Msa0627360:CDS 35.0%
!! GTTCTAAAAAGTGAGTGGAA+TGG + chr4_3:7424587-7424606 None:intergenic 35.0%
!! CAAGAGTTCTAAAAAGTGAG+TGG + chr4_3:7424592-7424611 None:intergenic 35.0%
TTTCATCAACCTAACTTTCC+AGG - chr4_3:7424632-7424651 Msa0627360:intron 35.0%
! TGTTTAACTTTGAGCAACGA+TGG - chr4_3:7424738-7424757 Msa0627360:intron 35.0%
CAGCTGTTTAGATCTATTGA+TGG - chr4_3:7424869-7424888 Msa0627360:intron 35.0%
CTGTTTAGATCTATTGATGG+TGG - chr4_3:7424872-7424891 Msa0627360:intron 35.0%
!! GTTTAGATCTATTGATGGTG+GGG - chr4_3:7424874-7424893 Msa0627360:intron 35.0%
GATATTAAGCCTGAAGACAT+TGG - chr4_3:7425079-7425098 Msa0627360:intron 35.0%
TTATGAGTAAGATTGAAGCC+GGG - chr4_3:7425140-7425159 Msa0627360:intron 35.0%
GATGTATAAGGATATCGTTC+TGG - chr4_3:7425267-7425286 Msa0627360:intron 35.0%
AAGAACGTCAAATAATTCCG+AGG + chr4_3:7425322-7425341 None:intergenic 35.0%
AATCGGGAAGTAAAGAAACA+AGG - chr4_3:7425352-7425371 Msa0627360:intron 35.0%
AACATAGATCATGAAACGTC+GGG + chr4_3:7425437-7425456 None:intergenic 35.0%
GAACATAGATCATGAAACGT+CGG + chr4_3:7425438-7425457 None:intergenic 35.0%
GTTCATACCAAGATGATGAT+AGG - chr4_3:7425454-7425473 Msa0627360:intron 35.0%
GATGACGAATACATAATCGT+TGG - chr4_3:7425594-7425613 Msa0627360:intron 35.0%
! CATTGATCTTTGGTTGATGT+TGG + chr4_3:7425625-7425644 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG - chr4_3:7425623-7425642 Msa0627360:CDS 35.0%
ATCAACCAAAGATCAATGGA+CGG - chr4_3:7425627-7425646 Msa0627360:CDS 35.0%
! TTGATTTTCTGGATGAAGGA+AGG + chr4_3:7425784-7425803 None:intergenic 35.0%
! CGGATACATTCTTGATTTTC+TGG + chr4_3:7425795-7425814 None:intergenic 35.0%
ACCAGATTGCTGACAAATAT+TGG - chr4_3:7425823-7425842 Msa0627360:intron 35.0%
CCAGATTGCTGACAAATATT+GGG - chr4_3:7425824-7425843 Msa0627360:intron 35.0%
TTAACTGCTATGACTTTAGC+TGG - chr4_3:7426198-7426217 Msa0627360:five_prime_UTR 35.0%
AGTGCAGTGTGACAAAACAA+TGG + chr4_3:7422008-7422027 None:intergenic 40.0%
GTGTGATCTGATGAGAAATG+GGG - chr4_3:7422434-7422453 Msa0627360:CDS 40.0%
! AATGGGGTTGTGTGATTTGT+AGG - chr4_3:7422450-7422469 Msa0627360:CDS 40.0%
!! GAGGTTGATAAGCTTAATGC+TGG - chr4_3:7422524-7422543 Msa0627360:CDS 40.0%
! GTTGATAAGCTTAATGCTGG+TGG - chr4_3:7422527-7422546 Msa0627360:CDS 40.0%
ACAGATCCTAAAAGCAAGCA+GGG + chr4_3:7422757-7422776 None:intergenic 40.0%
TTACAAATTAGGCATGGCAG+TGG + chr4_3:7423038-7423057 None:intergenic 40.0%
! GCCTAATTTGTAACAGATGG+TGG - chr4_3:7423045-7423064 Msa0627360:CDS 40.0%
CCCACCATCTGTTACAAATT+AGG + chr4_3:7423049-7423068 None:intergenic 40.0%
! TCAGTGTTATCGATTGCAGA+TGG + chr4_3:7423130-7423149 None:intergenic 40.0%
ACAGATCAGGCAAAACATTG+AGG - chr4_3:7423572-7423591 Msa0627360:CDS 40.0%
! ATTGAGGAAACTGTTGGTCT+TGG - chr4_3:7423588-7423607 Msa0627360:CDS 40.0%
!! GAAACTGTTGGTCTTGGAAA+GGG - chr4_3:7423594-7423613 Msa0627360:CDS 40.0%
!! TGCTACCATTGATTTGGAGA+AGG - chr4_3:7423632-7423651 Msa0627360:CDS 40.0%
TCTTGCCTTCTCCAAATCAA+TGG + chr4_3:7423640-7423659 None:intergenic 40.0%
GTGAAAAGACTCGTACCATT+TGG + chr4_3:7423703-7423722 None:intergenic 40.0%
CCTGTTGGAGCAACTTTAAT+CGG - chr4_3:7423777-7423796 Msa0627360:CDS 40.0%
ATGGTGAGGAAATTGATAGG+TGG - chr4_3:7423832-7423851 Msa0627360:CDS 40.0%
TGGTGAGGAAATTGATAGGT+GGG - chr4_3:7423833-7423852 Msa0627360:CDS 40.0%
! TGATAGGTGGGTGGAAATTT+TGG - chr4_3:7423845-7423864 Msa0627360:CDS 40.0%
ATCTTCGAACCCTCTTGTAT+CGG + chr4_3:7423885-7423904 None:intergenic 40.0%
! AAGAAAGTATACGGAACTCC+AGG + chr4_3:7423981-7424000 None:intergenic 40.0%
CGTATACTTTCTTCTCACAG+AGG - chr4_3:7423988-7424007 Msa0627360:CDS 40.0%
ACTTTCTTCTCACAGAGGAA+AGG - chr4_3:7423993-7424012 Msa0627360:CDS 40.0%
TTACCAAGATTCTCATGTGC+CGG - chr4_3:7424031-7424050 Msa0627360:CDS 40.0%
! CCACCAGAAAGTGGTATTTT+AGG + chr4_3:7424068-7424087 None:intergenic 40.0%
CCTAAAATACCACTTTCTGG+TGG - chr4_3:7424065-7424084 Msa0627360:CDS 40.0%
!! CATGTGTTTTGCATTGGTGA+TGG + chr4_3:7424135-7424154 None:intergenic 40.0%
TTCGGTATAAACAGACCAAC+CGG + chr4_3:7424168-7424187 None:intergenic 40.0%
ATACCGAAATTTCCTTGGTG+AGG - chr4_3:7424180-7424199 Msa0627360:CDS 40.0%
TACCGAAATTTCCTTGGTGA+GGG - chr4_3:7424181-7424200 Msa0627360:CDS 40.0%
ATCCCTCACCAAGGAAATTT+CGG + chr4_3:7424186-7424205 None:intergenic 40.0%
AGTACCTTCAAAGAACTGTG+CGG + chr4_3:7424366-7424385 None:intergenic 40.0%
! CTTCTGGTGATGAGTAAACA+TGG + chr4_3:7424462-7424481 None:intergenic 40.0%
TACTCATCACCAGAAGATTG+TGG - chr4_3:7424466-7424485 Msa0627360:CDS 40.0%
TTAACTTTGAGCAACGATGG+AGG - chr4_3:7424741-7424760 Msa0627360:intron 40.0%
AGGATTTACTTGTCTCTCTG+AGG - chr4_3:7424777-7424796 Msa0627360:intron 40.0%
GGATTTACTTGTCTCTCTGA+GGG - chr4_3:7424778-7424797 Msa0627360:intron 40.0%
TTCTATTATTCCTCCATCCC+CGG - chr4_3:7424811-7424830 Msa0627360:intron 40.0%
TGATCATCCGGAAATGTTAC+CGG + chr4_3:7424833-7424852 None:intergenic 40.0%
TATGAGTAAGATTGAAGCCG+GGG - chr4_3:7425141-7425160 Msa0627360:intron 40.0%
!! TGCATCGGTTCAAGCAATAT+TGG - chr4_3:7425219-7425238 Msa0627360:intron 40.0%
TATTTGACGTTCTTCTGCCT+CGG - chr4_3:7425328-7425347 Msa0627360:intron 40.0%
TCGTAATCTGAATCAGGTTC+TGG + chr4_3:7425400-7425419 None:intergenic 40.0%
TGTCTTGCAGCTAAATGGTA+GGG + chr4_3:7425690-7425709 None:intergenic 40.0%
ATAATGCCATGCGAAAACCA+TGG + chr4_3:7425731-7425750 None:intergenic 40.0%
! ATGGTTTTCGCATGGCATTA+TGG - chr4_3:7425730-7425749 Msa0627360:intron 40.0%
CCCAATATTTGTCAGCAATC+TGG + chr4_3:7425827-7425846 None:intergenic 40.0%
TCGGGGAAAAATTCAAATCC+AGG + chr4_3:7425945-7425964 None:intergenic 40.0%
ACTAAGTAGTGAGGATAGGA+GGG + chr4_3:7426007-7426026 None:intergenic 40.0%
AACTAAGTAGTGAGGATAGG+AGG + chr4_3:7426008-7426027 None:intergenic 40.0%
CCAAACTAAGTAGTGAGGAT+AGG + chr4_3:7426011-7426030 None:intergenic 40.0%
CCTATCCTCACTACTTAGTT+TGG - chr4_3:7426008-7426027 Msa0627360:intron 40.0%
TTGTCACACTGCACTCTTCT+CGG - chr4_3:7422013-7422032 Msa0627360:three_prime_UTR 45.0%
GATAAGCTTAATGCTGGTGG+TGG - chr4_3:7422530-7422549 Msa0627360:CDS 45.0%
TGGTGGAAATTTCCTCAGCA+TGG - chr4_3:7422550-7422569 Msa0627360:CDS 45.0%
GGATCACTGATGCATCAAAG+TGG - chr4_3:7422730-7422749 Msa0627360:CDS 45.0%
CACAGATCCTAAAAGCAAGC+AGG + chr4_3:7422758-7422777 None:intergenic 45.0%
AAGTCTCATCACAGATTCGC+TGG + chr4_3:7422852-7422871 None:intergenic 45.0%
! CCAACGGGTTTGCAAATGAT+CGG + chr4_3:7422931-7422950 None:intergenic 45.0%
TGAGCCACCTTAAAACTCCA+TGG + chr4_3:7423073-7423092 None:intergenic 45.0%
!!! GGCTCAAAATGACGGACTTT+TGG - chr4_3:7423087-7423106 Msa0627360:CDS 45.0%
! GTGTTATCGATTGCAGATGG+CGG + chr4_3:7423127-7423146 None:intergenic 45.0%
TGCTTCAGCACCTTACTCAT+TGG - chr4_3:7423332-7423351 Msa0627360:CDS 45.0%
!! GGAAACTGTTGGTCTTGGAA+AGG - chr4_3:7423593-7423612 Msa0627360:CDS 45.0%
! TGATTTGGAGAAGGCAAGAG+TGG - chr4_3:7423641-7423660 Msa0627360:CDS 45.0%
GATTTGGAGAAGGCAAGAGT+GGG - chr4_3:7423642-7423661 Msa0627360:CDS 45.0%
CCGATTAAAGTTGCTCCAAC+AGG + chr4_3:7423780-7423799 None:intergenic 45.0%
TGAGGAAATTGATAGGTGGG+TGG - chr4_3:7423836-7423855 Msa0627360:CDS 45.0%
TCTTCGAACCCTCTTGTATC+GGG + chr4_3:7423884-7423903 None:intergenic 45.0%
CTCACAGAGGAAAGGATGTA+AGG - chr4_3:7424001-7424020 Msa0627360:CDS 45.0%
TATCCGGCACATGAGAATCT+TGG + chr4_3:7424037-7424056 None:intergenic 45.0%
TAAGTCTTGCCACCAGAAAG+TGG + chr4_3:7424077-7424096 None:intergenic 45.0%
GCAAGACTTATGAGCCTCAT+CGG - chr4_3:7424087-7424106 Msa0627360:CDS 45.0%
! TTATGAGCCTCATCGGTGTT+GGG - chr4_3:7424094-7424113 Msa0627360:CDS 45.0%
TTTCCTTGGTGAGGGATTCT+AGG - chr4_3:7424189-7424208 Msa0627360:CDS 45.0%
TGGGATGATAGAACATCGGT+TGG - chr4_3:7424296-7424315 Msa0627360:CDS 45.0%
GAAACCGCACAGTTCTTTGA+AGG - chr4_3:7424359-7424378 Msa0627360:CDS 45.0%
! CTGGTGATGAGTAAACATGG+TGG + chr4_3:7424459-7424478 None:intergenic 45.0%
TCACCAGAAGATTGTGGTTG+TGG - chr4_3:7424472-7424491 Msa0627360:CDS 45.0%
TGTCCACAACCACAATCTTC+TGG + chr4_3:7424478-7424497 None:intergenic 45.0%
GTTGTGGACAGTGAATTACC+TGG - chr4_3:7424488-7424507 Msa0627360:CDS 45.0%
ACAGTGAATTACCTGGTGGA+AGG - chr4_3:7424495-7424514 Msa0627360:CDS 45.0%
TGAATTACCTGGTGGAAGGT+CGG - chr4_3:7424499-7424518 Msa0627360:CDS 45.0%
ATTGCAGCACCTGGAAAGTT+AGG + chr4_3:7424644-7424663 None:intergenic 45.0%
AATCACAAAAGGCGGTCCAA+GGG - chr4_3:7424661-7424680 Msa0627360:intron 45.0%
AACAACACATCCCAAGCGAT+CGG + chr4_3:7424722-7424741 None:intergenic 45.0%
ATCATCCGGAAATGTTACCG+GGG + chr4_3:7424831-7424850 None:intergenic 45.0%
GATCATCCGGAAATGTTACC+GGG + chr4_3:7424832-7424851 None:intergenic 45.0%
TTCCATGTCTCGTGATCATC+CGG + chr4_3:7424845-7424864 None:intergenic 45.0%
CAGCATCTTCAGGAGTTTCT+GGG + chr4_3:7424913-7424932 None:intergenic 45.0%
AGCTGGGCTTATTAGTGGAA+AGG - chr4_3:7424937-7424956 Msa0627360:intron 45.0%
! TCCTTGGAAGCTCTTTTGCT+TGG - chr4_3:7425047-7425066 Msa0627360:intron 45.0%
TCCAAGCAAAAGAGCTTCCA+AGG + chr4_3:7425051-7425070 None:intergenic 45.0%
! TGCAAAGCACCAATGTCTTC+AGG + chr4_3:7425091-7425110 None:intergenic 45.0%
TGCTTTGCATCTCATCCCAA+AGG - chr4_3:7425102-7425121 Msa0627360:intron 45.0%
! GTACACAGTGAACTTTTCCC+CGG + chr4_3:7425161-7425180 None:intergenic 45.0%
TGTACGTTGTTGTCCCAATG+TGG - chr4_3:7425176-7425195 Msa0627360:intron 45.0%
CGGTTCAAGCAATATTGGAC+TGG - chr4_3:7425224-7425243 Msa0627360:intron 45.0%
!! AAGCAATATTGGACTGGCAG+AGG - chr4_3:7425230-7425249 Msa0627360:intron 45.0%
TCTTTACTTCCCGATTACCG+AGG + chr4_3:7425348-7425367 None:intergenic 45.0%
! TCAGGTTCTGGTTGTTCAGA+AGG + chr4_3:7425388-7425407 None:intergenic 45.0%
GCTCTCTCGTAATCTGAATC+AGG + chr4_3:7425406-7425425 None:intergenic 45.0%
AGCTAAATGGTAGGGCTGAT+AGG + chr4_3:7425682-7425701 None:intergenic 45.0%
CTGTCTTGCAGCTAAATGGT+AGG + chr4_3:7425691-7425710 None:intergenic 45.0%
! TCAAGTCCATGGTTTTCGCA+TGG - chr4_3:7425722-7425741 Msa0627360:intron 45.0%
GCATTATGGTATGAGCACCT+TGG - chr4_3:7425744-7425763 Msa0627360:intron 45.0%
! CAGCAATCTGGTTCACCTTA+CGG + chr4_3:7425815-7425834 None:intergenic 45.0%
CCTTCACTAGCAACTCCAAT+CGG + chr4_3:7425906-7425925 None:intergenic 45.0%
! TGAATTTTTCCCCGACACCA+AGG - chr4_3:7425950-7425969 Msa0627360:intron 45.0%
!!! AAAAAAAAAAAAGAATATTT+TGG - chr4_3:7422701-7422720 Msa0627360:intron 5.0%
CTTTAAGTAGGCCCCGTTAG+TGG - chr4_3:7422318-7422337 Msa0627360:CDS 50.0%
!! AAGCTTAATGCTGGTGGTGG+TGG - chr4_3:7422533-7422552 Msa0627360:CDS 50.0%
!! AGTGGACCCTGCTTGCTTTT+AGG - chr4_3:7422748-7422767 Msa0627360:CDS 50.0%
CCGATCATTTGCAAACCCGT+TGG - chr4_3:7422928-7422947 Msa0627360:CDS 50.0%
AGTGGCCAAAATATCCGCCA+TGG + chr4_3:7423020-7423039 None:intergenic 50.0%
!!! GGACTTTTGGCTTTCCACCA+TGG - chr4_3:7423100-7423119 Msa0627360:CDS 50.0%
! AAGAGCATATGTGCCTGTCG+AGG - chr4_3:7423800-7423819 Msa0627360:CDS 50.0%
CTTATGAGCCTCATCGGTGT+TGG - chr4_3:7424093-7424112 Msa0627360:CDS 50.0%
ATATCCTCCCAACACCGATG+AGG + chr4_3:7424104-7424123 None:intergenic 50.0%
! ATTCTAGGAGGCCAAAGGCT+GGG - chr4_3:7424204-7424223 Msa0627360:CDS 50.0%
TACCGCCATCATCAGGATTG+CGG + chr4_3:7424412-7424431 None:intergenic 50.0%
ATGATGCTACCGCCATCATC+AGG + chr4_3:7424419-7424438 None:intergenic 50.0%
!! TGATGGCGGTAGCATCATTC+AGG - chr4_3:7424421-7424440 Msa0627360:CDS 50.0%
GTGGACAGTGAATTACCTGG+TGG - chr4_3:7424491-7424510 Msa0627360:CDS 50.0%
! CCTTTTGTGATTGCAGCACC+TGG + chr4_3:7424653-7424672 None:intergenic 50.0%
! CCAGGTGCTGCAATCACAAA+AGG - chr4_3:7424650-7424669 Msa0627360:intron 50.0%
! GGTGCTGCAATCACAAAAGG+CGG - chr4_3:7424653-7424672 Msa0627360:intron 50.0%
CAATCACAAAAGGCGGTCCA+AGG - chr4_3:7424660-7424679 Msa0627360:intron 50.0%
ATGTCATGCCAAGGTTCCCT+TGG + chr4_3:7424680-7424699 None:intergenic 50.0%
CGGGAATGAATGTCATGCCA+AGG + chr4_3:7424689-7424708 None:intergenic 50.0%
GACATTCATTCCCGCCTTGA+AGG - chr4_3:7424695-7424714 Msa0627360:intron 50.0%
AACGATGGAGGAAGCAAGGT+GGG - chr4_3:7424753-7424772 Msa0627360:intron 50.0%
TCCATCCCCGGTAACATTTC+CGG - chr4_3:7424823-7424842 Msa0627360:intron 50.0%
TTCCGGATGATCACGAGACA+TGG - chr4_3:7424840-7424859 Msa0627360:intron 50.0%
!!! ATTGATGGTGGGGCTGCTTT+TGG - chr4_3:7424884-7424903 Msa0627360:intron 50.0%
!!! TTGATGGTGGGGCTGCTTTT+GGG - chr4_3:7424885-7424904 Msa0627360:intron 50.0%
GCAGCATCTTCAGGAGTTTC+TGG + chr4_3:7424914-7424933 None:intergenic 50.0%
! GGAAGCTCTTTTGCTTGGAG+TGG - chr4_3:7425052-7425071 Msa0627360:intron 50.0%
! CTCTTTTGCTTGGAGTGGTG+AGG - chr4_3:7425057-7425076 Msa0627360:intron 50.0%
GCTTGAACCGATGCACTTTC+TGG + chr4_3:7425214-7425233 None:intergenic 50.0%
AGGATATCGTTCTGGCACTC+AGG - chr4_3:7425275-7425294 Msa0627360:intron 50.0%
GGATATCGTTCTGGCACTCA+GGG - chr4_3:7425276-7425295 Msa0627360:intron 50.0%
AGGGAATCGAGGAAGATCCT+CGG - chr4_3:7425302-7425321 Msa0627360:intron 50.0%
CGTTCTTCTGCCTCGGTAAT+CGG - chr4_3:7425335-7425354 Msa0627360:intron 50.0%
GTTCTTCTGCCTCGGTAATC+GGG - chr4_3:7425336-7425355 Msa0627360:intron 50.0%
CATGAAACGTCGGGACTGTT+GGG + chr4_3:7425428-7425447 None:intergenic 50.0%
TCATGAAACGTCGGGACTGT+TGG + chr4_3:7425429-7425448 None:intergenic 50.0%
TCGCTCCGTCCATTGATCTT+TGG + chr4_3:7425635-7425654 None:intergenic 50.0%
AAAGATCAATGGACGGAGCG+AGG - chr4_3:7425634-7425653 Msa0627360:CDS 50.0%
AAGATCAATGGACGGAGCGA+GGG - chr4_3:7425635-7425654 Msa0627360:CDS 50.0%
!! AGGGACTCTGAGATAGCGAT+GGG - chr4_3:7425654-7425673 Msa0627360:CDS 50.0%
CTGGCTGTCTTGCAGCTAAA+TGG + chr4_3:7425695-7425714 None:intergenic 50.0%
AGGAGTCATGAAGCATGCCA+AGG + chr4_3:7425764-7425783 None:intergenic 50.0%
CACTTGCTTCGCTATCCGAT+TGG - chr4_3:7425888-7425907 Msa0627360:intron 50.0%
CCGATTGGAGTTGCTAGTGA+AGG - chr4_3:7425903-7425922 Msa0627360:intron 50.0%
AAGTAGTGAGGATAGGAGGG+AGG + chr4_3:7426004-7426023 None:intergenic 50.0%
AAGTAGGCCCCGTTAGTGGA+CGG - chr4_3:7422322-7422341 Msa0627360:CDS 55.0%
!!! CAGCGCCATGGCGGATATTT+TGG - chr4_3:7423012-7423031 Msa0627360:CDS 55.0%
!! TGTAACAGATGGTGGGGCCA+TGG - chr4_3:7423053-7423072 Msa0627360:CDS 55.0%
! GGTGGGGCCATGGAGTTTTA+AGG - chr4_3:7423063-7423082 Msa0627360:CDS 55.0%
!!! GGGGCCATGGAGTTTTAAGG+TGG - chr4_3:7423066-7423085 Msa0627360:CDS 55.0%
TGGAGAAGGCAAGAGTGGGA+AGG - chr4_3:7423646-7423665 Msa0627360:CDS 55.0%
AGCATATGTGCCTGTCGAGG+AGG - chr4_3:7423803-7423822 Msa0627360:CDS 55.0%
CCATTCAAGACCTCCTCGAC+AGG + chr4_3:7423816-7423835 None:intergenic 55.0%
CCTGTCGAGGAGGTCTTGAA+TGG - chr4_3:7423813-7423832 Msa0627360:CDS 55.0%
CGAGGAGGTCTTGAATGGTG+AGG - chr4_3:7423818-7423837 Msa0627360:CDS 55.0%
ATGTCACGAAAGACCGCAGC+TGG - chr4_3:7423928-7423947 Msa0627360:CDS 55.0%
TGTCACGAAAGACCGCAGCT+GGG - chr4_3:7423929-7423948 Msa0627360:CDS 55.0%
CCTCCTAGAATCCCTCACCA+AGG + chr4_3:7424195-7424214 None:intergenic 55.0%
CCTTGGTGAGGGATTCTAGG+AGG - chr4_3:7424192-7424211 Msa0627360:CDS 55.0%
! GAGGGATTCTAGGAGGCCAA+AGG - chr4_3:7424199-7424218 Msa0627360:CDS 55.0%
! GATTCTAGGAGGCCAAAGGC+TGG - chr4_3:7424203-7424222 Msa0627360:CDS 55.0%
! TTCTAGGAGGCCAAAGGCTG+GGG - chr4_3:7424205-7424224 Msa0627360:CDS 55.0%
GCTGGGGGAGACACAACAAT+TGG - chr4_3:7424221-7424240 Msa0627360:CDS 55.0%
ACCGCCATCATCAGGATTGC+GGG + chr4_3:7424411-7424430 None:intergenic 55.0%
AAGCGATCGGTCCTTCAAGG+CGG + chr4_3:7424709-7424728 None:intergenic 55.0%
CCTTGAAGGACCGATCGCTT+GGG - chr4_3:7424709-7424728 Msa0627360:intron 55.0%
GAGCAACGATGGAGGAAGCA+AGG - chr4_3:7424749-7424768 Msa0627360:intron 55.0%
CAACGATGGAGGAAGCAAGG+TGG - chr4_3:7424752-7424771 Msa0627360:intron 55.0%
ATGGAGGAAGCAAGGTGGGA+AGG - chr4_3:7424757-7424776 Msa0627360:intron 55.0%
GGAAATGTTACCGGGGATGG+AGG + chr4_3:7424824-7424843 None:intergenic 55.0%
TCCGGAAATGTTACCGGGGA+TGG + chr4_3:7424827-7424846 None:intergenic 55.0%
CTGAAGATGCTGCGAGAGCT+GGG - chr4_3:7424921-7424940 Msa0627360:intron 55.0%
GCGAGAGCTGGGCTTATTAG+TGG - chr4_3:7424932-7424951 Msa0627360:intron 55.0%
TGTTGTCCCAATGTGGCCAG+AGG - chr4_3:7425183-7425202 Msa0627360:intron 55.0%
GTTGTCCCAATGTGGCCAGA+GGG - chr4_3:7425184-7425203 Msa0627360:intron 55.0%
! GGGTGTGCCAGAAAGTGCAT+CGG - chr4_3:7425204-7425223 Msa0627360:intron 55.0%
! GGACTGGCAGAGGAGAACAA+TGG - chr4_3:7425240-7425259 Msa0627360:intron 55.0%
GTTCTGGCACTCAGGGCAAA+GGG - chr4_3:7425283-7425302 Msa0627360:intron 55.0%
ACTCAGGGCAAAGGGAATCG+AGG - chr4_3:7425291-7425310 Msa0627360:intron 55.0%
!! GAGGGACTCTGAGATAGCGA+TGG - chr4_3:7425653-7425672 Msa0627360:CDS 55.0%
TCACTTGAGCACGACCTTCC+TGG - chr4_3:7425864-7425883 Msa0627360:intron 55.0%
AGCGAAGCAAGTGTCCAGGA+AGG + chr4_3:7425881-7425900 None:intergenic 55.0%
GGATAGCGAAGCAAGTGTCC+AGG + chr4_3:7425885-7425904 None:intergenic 55.0%
! TTTTCCCCGACACCAAGGCT+CGG - chr4_3:7425955-7425974 Msa0627360:intron 55.0%
!! AGAATCCGAGCCTTGGTGTC+GGG + chr4_3:7425963-7425982 None:intergenic 55.0%
! GAGAATCCGAGCCTTGGTGT+CGG + chr4_3:7425964-7425983 None:intergenic 55.0%
GACACCAAGGCTCGGATTCT+CGG - chr4_3:7425963-7425982 Msa0627360:intron 55.0%
TCAACCCCGCCGTCCACTAA+CGG + chr4_3:7422334-7422353 None:intergenic 60.0%
TATCCGCCATGGCGCTGCTA+TGG + chr4_3:7423009-7423028 None:intergenic 60.0%
!! TTGCAGATGGCGGACCATGG+TGG + chr4_3:7423117-7423136 None:intergenic 60.0%
!! CGATTGCAGATGGCGGACCA+TGG + chr4_3:7423120-7423139 None:intergenic 60.0%
!! TGAGCCTCATCGGTGTTGGG+AGG - chr4_3:7424097-7424116 Msa0627360:CDS 60.0%
TCTAGGAGGCCAAAGGCTGG+GGG - chr4_3:7424206-7424225 Msa0627360:CDS 60.0%
GTTGTGTCTCCCCCAGCCTT+TGG + chr4_3:7424218-7424237 None:intergenic 60.0%
TGCCCCCGCAATCCTGATGA+TGG - chr4_3:7424404-7424423 Msa0627360:CDS 60.0%
CGCCATCATCAGGATTGCGG+GGG + chr4_3:7424409-7424428 None:intergenic 60.0%
CCGCCATCATCAGGATTGCG+GGG + chr4_3:7424410-7424429 None:intergenic 60.0%
!! CCCCGCAATCCTGATGATGG+CGG - chr4_3:7424407-7424426 Msa0627360:CDS 60.0%
CGCTTATCCGACCTTCCACC+AGG + chr4_3:7424509-7424528 None:intergenic 60.0%
GGGGGTCTCGACCTTTGTGA+TGG - chr4_3:7424548-7424567 Msa0627360:CDS 60.0%
AAGGCGGTCCAAGGGAACCT+TGG - chr4_3:7424669-7424688 Msa0627360:intron 60.0%
AGCGATCGGTCCTTCAAGGC+GGG + chr4_3:7424708-7424727 None:intergenic 60.0%
GCCTTGAAGGACCGATCGCT+TGG - chr4_3:7424708-7424727 Msa0627360:intron 60.0%
CCCAAGCGATCGGTCCTTCA+AGG + chr4_3:7424712-7424731 None:intergenic 60.0%
CCAGCTCTCGCAGCATCTTC+AGG + chr4_3:7424923-7424942 None:intergenic 60.0%
CCTGAAGATGCTGCGAGAGC+TGG - chr4_3:7424920-7424939 Msa0627360:intron 60.0%
GCACACCCTCTGGCCACATT+GGG + chr4_3:7425192-7425211 None:intergenic 60.0%
! GCACTTTCTGGCACACCCTC+TGG + chr4_3:7425202-7425221 None:intergenic 60.0%
CGTTCTGGCACTCAGGGCAA+AGG - chr4_3:7425282-7425301 Msa0627360:intron 60.0%
CCATGGACTTGACCACGTGC+TGG + chr4_3:7425714-7425733 None:intergenic 60.0%
CCAGCACGTGGTCAAGTCCA+TGG - chr4_3:7425711-7425730 Msa0627360:intron 60.0%
GGAGATGTCACACAGCTGCC+TGG - chr4_3:7425924-7425943 Msa0627360:intron 60.0%
!! GAATCCGAGCCTTGGTGTCG+GGG + chr4_3:7425962-7425981 None:intergenic 60.0%
ACCAAGGCTCGGATTCTCGG+CGG - chr4_3:7425966-7425985 Msa0627360:intron 60.0%
! TAGGCCCCGTTAGTGGACGG+CGG - chr4_3:7422325-7422344 Msa0627360:CDS 65.0%
AACCCCGCCGTCCACTAACG+GGG + chr4_3:7422332-7422351 None:intergenic 65.0%
CAACCCCGCCGTCCACTAAC+GGG + chr4_3:7422333-7422352 None:intergenic 65.0%
! AGTGGACGGCGGGGTTGATC+AGG - chr4_3:7422336-7422355 Msa0627360:CDS 65.0%
! GTGGACGGCGGGGTTGATCA+GGG - chr4_3:7422337-7422356 Msa0627360:CDS 65.0%
! ACGGCGGGGTTGATCAGGGT+TGG - chr4_3:7422341-7422360 Msa0627360:CDS 65.0%
TGTCGGCCATAGCAGCGCCA+TGG - chr4_3:7423000-7423019 Msa0627360:CDS 65.0%
AAAGACCGCAGCTGGGCTCG+AGG - chr4_3:7423936-7423955 Msa0627360:CDS 65.0%
GAATGCCTCGAGCCCAGCTG+CGG + chr4_3:7423944-7423963 None:intergenic 65.0%
GGCACACCCTCTGGCCACAT+TGG + chr4_3:7425193-7425212 None:intergenic 65.0%
GCTGCAAGACAGCCAGCACG+TGG - chr4_3:7425699-7425718 Msa0627360:intron 65.0%
! AGGCCCCGTTAGTGGACGGC+GGG - chr4_3:7422326-7422345 Msa0627360:CDS 70.0%
CGGCCATAGCAGCGCCATGG+CGG - chr4_3:7423003-7423022 Msa0627360:CDS 70.0%
GCCGCCGAGAATCCGAGCCT+TGG + chr4_3:7425970-7425989 None:intergenic 70.0%
! GGCCCCGTTAGTGGACGGCG+GGG - chr4_3:7422327-7422346 Msa0627360:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 7421944 7426243 7421944 ID=Msa0627360;Name=Msa0627360
chr4_3 mRNA 7421944 7426243 7421944 ID=Msa0627360-mRNA-1;Parent=Msa0627360;Name=Msa0627360-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168|1|0.75|1|0.66|0.5|4|218|808
chr4_3 exon 7421944 7422595 7421944 ID=Msa0627360-mRNA-1:exon:2196;Parent=Msa0627360-mRNA-1
chr4_3 exon 7422712 7424611 7422712 ID=Msa0627360-mRNA-1:exon:2195;Parent=Msa0627360-mRNA-1
chr4_3 exon 7425616 7425715 7425616 ID=Msa0627360-mRNA-1:exon:2194;Parent=Msa0627360-mRNA-1
chr4_3 exon 7426083 7426243 7426083 ID=Msa0627360-mRNA-1:exon:2193;Parent=Msa0627360-mRNA-1
chr4_3 five_prime_UTR 7426083 7426243 7426083 ID=Msa0627360-mRNA-1:five_prime_utr;Parent=Msa0627360-mRNA-1
chr4_3 five_prime_UTR 7425709 7425715 7425709 ID=Msa0627360-mRNA-1:five_prime_utr;Parent=Msa0627360-mRNA-1
chr4_3 CDS 7425616 7425708 7425616 ID=Msa0627360-mRNA-1:cds;Parent=Msa0627360-mRNA-1
chr4_3 CDS 7422712 7424611 7422712 ID=Msa0627360-mRNA-1:cds;Parent=Msa0627360-mRNA-1
chr4_3 CDS 7422162 7422595 7422162 ID=Msa0627360-mRNA-1:cds;Parent=Msa0627360-mRNA-1
chr4_3 three_prime_UTR 7421944 7422161 7421944 ID=Msa0627360-mRNA-1:three_prime_utr;Parent=Msa0627360-mRNA-1
Gene Sequence

>Msa0627360

ATGGCACAAATTCATCTTCATGGTACTCTTCATGCTACTATCTATGAGGTTGATAAGCTTAATGCTGGTGGTGGTGGAAATTTCCTCAGCATGATCAGGCAAAACATTGAGGAAACTGTTGGTCTTGGAAAGGGAGTTACTAAACTCTATGCTACCATTGATTTGGAGAAGGCAAGAGTGGGAAGGACAAGAATTATTGAAAATGAGCATACTAATCCCAAATGGTACGAGTCTTTTCACATTTACTGTGCTCATATGGCTTCAGATATCATATTCACTGTGAAAGATGATAATCCTGTTGGAGCAACTTTAATCGGAAGAGCATATGTGCCTGTCGAGGAGGTCTTGAATGGTGAGGAAATTGATAGGTGGGTGGAAATTTTGGACACTGAAAAAAACCCGATACAAGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTTGATGTCACGAAAGACCGCAGCTGGGCTCGAGGCATTCAAAGCGCTAAATTTCCTGGAGTTCCGTATACTTTCTTCTCACAGAGGAAAGGATGTAAGGTATCTCTTTACCAAGATTCTCATGTGCCGGATAATTTCATCCCTAAAATACCACTTTCTGGTGGCAAGACTTATGAGCCTCATCGGTGTTGGGAGGATATTTATGATGCCATCACCAATGCAAAACACATGATATACATTACCGGTTGGTCTGTTTATACCGAAATTTCCTTGGTGAGGGATTCTAGGAGGCCAAAGGCTGGGGGAGACACAACAATTGGTGAGCTTCTAAAGAAAAAGTCTAGTGAAGGTGTTAGGGTTTTGATGCTTGTTTGGGATGATAGAACATCGGTTGGTTTGTTGAAAAAGGATGGATTGATGGCTACTCATGACGAAGAAACCGCACAGTTCTTTGAAGGTACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGATGGCGGTAGCATCATTCAGGATTTACAAGTTTCCACCATGTTTACTCATCACCAGAAGATTGTGGTTGTGGACAGTGAATTACCTGGTGGAAGGTCGGATAAGCGAAGAATTGTGAGTTTTGTTGGGGGTCTCGACCTTTGTGATGGAAGATATGATACTCCATTCCACTCACTTTTTAGAACTCTTGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCAGGTGCTGCAATCACAAAAGGCGGTCCAAGGGAACCTTGGCATGACATTCATTCCCGCCTTGAAGGACCGATCGCTTGGGATGTGTTGTTTAACTTTGAGCAACGATGGAGGAAGCAAGGTGGGAAGGATTTACTTGTCTCTCTGAGGGAGCTTGAAGATTCTATTATTCCTCCATCCCCGGTAACATTTCCGGATGATCACGAGACATGGAATGTTCAGCTGTTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCAGAAACTCCTGAAGATGCTGCGAGAGCTGGGCTTATTAGTGGAAAGGATAATATCATCGATCGTAGCATTCAAGATGCTTATATTAATGCTATTCGGCGTGCAAAGAACTTCATCTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGGTGAGGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTCATCCCAAAGGAACTTTCACTTAAGATTATGAGTAAGATTGAAGCCGGGGAAAAGTTCACTGTGTACGTTGTTGTCCCAATGTGGCCAGAGGGTGTGCCAGAAAGTGCATCGGTTCAAGCAATATTGGACTGGCAGAGGAGAACAATGGAGATGATGTATAAGGATATCGTTCTGGCACTCAGGGCAAAGGGAATCGAGGAAGATCCTCGGAATTATTTGACGTTCTTCTGCCTCGGTAATCGGGAAGTAAAGAAACAAGGAGAGTACGAGCCTTCTGAACAACCAGAACCTGATTCAGATTACGAGAGAGCCCAACAGTCCCGACGTTTCATGATCTATGTTCATACCAAGATGATGATAGTTGATGACGAATACATAATCGTTGGATCTGCCAACATCAACCAAAGATCAATGGACGGAGCGAGGGACTCTGAGATAGCGATGGGAGCCTATCAGCCCTACCATTTAGCTGCAAGACAGCCAGCACGTGGTCAAGTCCATGGTTTTCGCATGGCATTATGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTTCATCCAGAAAATCAAGAATGTATCCGTAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCAAATGATTCACTTGAGCACGACCTTCCTGGACACTTGCTTCGCTATCCGATTGGAGTTGCTAGTGAAGGAGATGTCACACAGCTGCCTGGATTTGAATTTTTCCCCGACACCAAGGCTCGGATTCTCGGCGGCAAAGCTGATTACCTCCCTCCTATCCTCACTACTTAG
Protein sequence

>Msa0627360

MAQIHLHGTLHATIYEVDKLNAGGGGNFLSMIRQNIEETVGLGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHMASDIIFTVKDDNPVGATLIGRAYVPVEEVLNGEEIDRWVEILDTEKNPIQEGSKIHVKLQYFDVTKDRSWARGIQSAKFPGVPYTFFSQRKGCKVSLYQDSHVPDNFIPKIPLSGGKTYEPHRCWEDIYDAITNAKHMIYITGWSVYTEISLVRDSRRPKAGGDTTIGELLKKKSSEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFEGTDVHCVLCPRNPDDGGSIIQDLQVSTMFTHHQKIVVVDSELPGGRSDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVTFPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWSGEDIKPEDIGALHLIPKELSLKIMSKIEAGEKFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDIVLALRAKGIEEDPRNYLTFFCLGNREVKKQGEYEPSEQPEPDSDYERAQQSRRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQVHGFRMALWYEHLGMLHDSFLHPENQECIRKVNQIADKYWDLYSNDSLEHDLPGHLLRYPIGVASEGDVTQLPGFEFFPDTKARILGGKADYLPPILTT*