AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1121080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121080 MtrunA17_Chr7g0250391 82.673 808 115 3 1 806 1 785 0.0 1316
Msa1121080 MtrunA17_Chr7g0250331 82.955 792 119 4 24 806 25 809 0.0 1305
Msa1121080 MtrunA17_Chr7g0250371 80.556 792 130 2 17 806 18 787 0.0 1294
Msa1121080 MtrunA17_Chr7g0250411 76.700 794 156 4 17 806 18 786 0.0 1229
Msa1121080 MtrunA17_Chr7g0250481 69.988 823 207 5 1 806 1 800 0.0 1147
Msa1121080 MtrunA17_Chr7g0250461 74.333 487 101 2 17 501 18 482 0.0 728
Msa1121080 MtrunA17_Chr4g0057531 49.433 793 344 20 26 804 28 777 0.0 714
Msa1121080 MtrunA17_Chr3g0120521 47.917 816 367 20 1 804 1 770 0.0 698
Msa1121080 MtrunA17_Chr4g0057471 50.330 757 312 22 64 804 1 709 0.0 664
Msa1121080 MtrunA17_Chr4g0076611 49.866 748 301 22 75 803 1 693 0.0 653
Msa1121080 MtrunA17_Chr5g0439271 56.752 622 230 13 193 803 8 601 0.0 649
Msa1121080 MtrunA17_Chr4g0057481 48.821 721 310 20 97 804 16 690 0.0 612
Msa1121080 MtrunA17_Chr4g0057461 50.075 665 282 18 152 804 3 629 0.0 596
Msa1121080 MtrunA17_Chr4g0057511 49.163 657 283 19 156 804 3 616 0.0 559
Msa1121080 MtrunA17_Chr4g0057491 47.662 663 294 19 152 804 3 622 0.0 552
Msa1121080 MtrunA17_Chr5g0423261 47.076 667 294 19 151 804 2 622 0.0 548
Msa1121080 MtrunA17_Chr4g0053781 40.125 800 409 23 15 803 14 754 1.31e-171 513
Msa1121080 MtrunA17_Chr4g0026641 40.171 819 405 24 4 804 3 754 1.82e-170 510
Msa1121080 MtrunA17_Chr1g0204321 38.376 813 432 26 12 803 12 776 1.37e-167 504
Msa1121080 MtrunA17_Chr8g0369891 40.561 784 394 24 30 804 33 753 2.07e-167 503
Msa1121080 MtrunA17_Chr7g0250441 83.860 285 46 0 522 806 1 285 2.53e-165 481
Msa1121080 MtrunA17_Chr5g0407701 40.621 805 399 27 17 804 8 750 9.16e-165 496
Msa1121080 MtrunA17_Chr4g0020651 39.870 770 399 21 50 806 41 759 2.85e-163 492
Msa1121080 MtrunA17_Chr5g0401511 38.556 817 424 22 7 806 8 763 4.28e-163 492
Msa1121080 MtrunA17_Chr8g0351011 40.127 790 389 24 23 803 37 751 1.20e-162 490
Msa1121080 MtrunA17_Chr4g0037221 38.752 769 371 22 75 805 63 769 1.73e-161 488
Msa1121080 MtrunA17_Chr7g0246451 38.568 796 386 21 28 805 37 747 2.63e-161 486
Msa1121080 MtrunA17_Chr2g0300751 40.584 754 373 23 69 801 71 770 3.89e-161 487
Msa1121080 MtrunA17_Chr8g0377961 38.750 800 395 22 32 804 44 775 3.91e-161 487
Msa1121080 MtrunA17_Chr1g0152771 38.113 816 410 25 15 801 11 760 3.56e-160 484
Msa1121080 MtrunA17_Chr8g0354771 39.114 790 417 20 30 804 24 764 1.11e-157 478
Msa1121080 MtrunA17_Chr2g0285111 37.715 814 410 24 30 803 29 785 6.42e-156 474
Msa1121080 MtrunA17_Chr2g0285121 38.433 817 400 28 30 803 26 782 9.44e-156 473
Msa1121080 MtrunA17_Chr7g0262161 39.379 805 401 27 24 803 18 760 2.29e-155 472
Msa1121080 MtrunA17_Chr3g0136151 39.114 790 401 24 30 803 36 761 2.79e-155 471
Msa1121080 MtrunA17_Chr8g0334521 36.745 811 411 27 10 805 12 735 1.17e-154 469
Msa1121080 MtrunA17_Chr3g0143251 38.107 824 426 28 2 803 3 764 8.48e-153 465
Msa1121080 MtrunA17_Chr1g0170081 37.674 791 383 26 30 804 35 731 1.78e-148 453
Msa1121080 MtrunA17_Chr1g0189251 36.965 817 420 26 5 803 14 753 4.12e-148 453
Msa1121080 MtrunA17_Chr7g0266051 37.664 762 397 18 52 803 12 705 5.94e-148 451
Msa1121080 MtrunA17_Chr8g0345971 38.697 752 389 20 61 803 70 758 2.99e-147 451
Msa1121080 MtrunA17_Chr7g0227991 36.675 818 417 26 4 806 5 736 9.46e-147 448
Msa1121080 MtrunA17_Chr4g0070391 37.546 823 418 24 1 801 1 749 2.48e-146 448
Msa1121080 MtrunA17_Chr3g0134621 37.956 822 391 26 3 801 8 733 2.66e-146 447
Msa1121080 MtrunA17_Chr6g0470851 36.777 813 412 31 5 805 9 731 3.42e-146 447
Msa1121080 MtrunA17_Chr1g0146251 36.745 811 416 25 6 804 10 735 2.35e-145 445
Msa1121080 MtrunA17_Chr8g0344331 38.189 762 378 26 75 804 75 775 2.73e-145 446
Msa1121080 MtrunA17_Chr8g0345991 38.859 754 367 24 75 803 69 753 7.29e-145 444
Msa1121080 MtrunA17_Chr8g0345981 36.165 824 427 24 6 803 7 757 7.20e-144 442
Msa1121080 MtrunA17_Chr6g0470881 36.564 815 416 26 4 805 5 731 3.56e-143 439
Msa1121080 MtrunA17_Chr1g0146271 37.192 812 409 29 6 804 10 733 1.04e-142 438
Msa1121080 MtrunA17_Chr8g0344971 37.649 757 382 23 75 803 65 759 5.04e-141 434
Msa1121080 MtrunA17_Chr2g0303881 39.653 749 368 19 75 803 41 725 9.48e-140 430
Msa1121080 MtrunA17_Chr8g0334491 35.866 803 380 29 30 804 33 728 1.79e-138 427
Msa1121080 MtrunA17_Chr8g0354741 40.419 668 335 20 146 804 21 634 5.10e-137 420
Msa1121080 MtrunA17_Chr3g0079971 34.799 819 432 26 1 804 1 732 5.60e-137 423
Msa1121080 MtrunA17_Chr4g0057061 37.694 772 397 27 44 803 75 774 1.71e-135 421
Msa1121080 MtrunA17_Chr8g0345961 35.854 820 412 24 16 803 19 756 5.58e-135 419
Msa1121080 MtrunA17_Chr7g0246461 38.089 743 363 25 75 803 80 739 5.92e-135 418
Msa1121080 MtrunA17_Chr1g0189561 35.122 820 428 27 15 803 14 760 4.05e-132 411
Msa1121080 MtrunA17_Chr8g0376841 40.488 615 289 16 23 626 33 581 6.07e-131 402
Msa1121080 MtrunA17_Chr5g0447171 44.123 553 213 15 305 806 3 510 5.94e-130 397
Msa1121080 MtrunA17_Chr5g0398241 37.197 742 390 23 72 803 78 753 1.62e-124 391
Msa1121080 MtrunA17_Chr5g0398401 36.913 745 394 23 72 806 78 756 1.71e-124 391
Msa1121080 MtrunA17_Chr5g0398331 35.819 751 394 25 68 803 73 750 1.34e-116 370
Msa1121080 MtrunA17_Chr5g0398311 36.000 775 409 25 41 803 47 746 1.88e-114 365
Msa1121080 MtrunA17_Chr5g0398351 36.913 745 388 27 72 803 829 1504 1.22e-113 377
Msa1121080 MtrunA17_Chr5g0398351 35.973 745 394 25 72 803 59 733 1.01e-111 372
Msa1121080 MtrunA17_Chr3g0103061 62.362 271 87 4 1 267 1 260 3.49e-110 337
Msa1121080 MtrunA17_Chr7g0248861 35.596 604 321 13 71 664 77 622 2.40e-104 341
Msa1121080 MtrunA17_Chr7g0248861 45.992 237 113 8 135 368 629 853 1.43e-48 185
Msa1121080 MtrunA17_Chr7g0261701 58.974 273 104 7 532 803 24 289 9.19e-94 295
Msa1121080 MtrunA17_Chr4g0071871 32.357 785 449 25 58 804 74 814 1.84e-92 308
Msa1121080 MtrunA17_Chr2g0298601 33.007 818 422 35 46 801 58 811 9.74e-92 306
Msa1121080 MtrunA17_Chr3g0143241 42.824 432 215 14 2 424 3 411 4.27e-91 297
Msa1121080 MtrunA17_Chr7g0261691 45.070 355 143 11 149 491 14 328 7.22e-86 276
Msa1121080 MtrunA17_Chr8g0380961 31.291 767 449 24 76 803 118 845 2.43e-79 273
Msa1121080 MtrunA17_Chr2g0302951 32.497 797 448 32 54 806 91 841 9.11e-79 271
Msa1121080 MtrunA17_Chr6g0480721 45.425 306 142 8 75 376 5 289 2.81e-76 259
Msa1121080 MtrunA17_Chr6g0480721 41.367 278 140 9 534 803 337 599 1.49e-48 182
Msa1121080 MtrunA17_Chr5g0439281 60.000 190 72 2 10 195 8 197 4.88e-74 239
Msa1121080 MtrunA17_Chr4g0075331 29.024 789 462 29 60 803 2 737 3.17e-67 237
Msa1121080 MtrunA17_Chr4g0026651 42.587 317 133 9 89 371 1 302 2.38e-66 223
Msa1121080 MtrunA17_Chr7g0248871 36.979 384 205 14 11 377 6 369 2.34e-65 233
Msa1121080 MtrunA17_Chr7g0248871 43.357 286 151 8 526 803 481 763 3.34e-56 206
Msa1121080 MtrunA17_Chr7g0276151 41.667 324 170 8 55 377 63 368 8.59e-65 231
Msa1121080 MtrunA17_Chr7g0276151 44.884 303 153 8 512 803 456 755 6.52e-59 214
Msa1121080 MtrunA17_Chr3g0103071 44.201 319 138 11 279 593 1 283 1.40e-64 217
Msa1121080 MtrunA17_Chr3g0097061 36.641 393 202 12 104 494 4 351 3.85e-61 213
Msa1121080 MtrunA17_Chr3g0097061 46.729 107 49 2 587 693 332 430 2.53e-23 103
Msa1121080 MtrunA17_Chr3g0105461 40.431 371 160 10 6 371 6 320 4.39e-61 210
Msa1121080 MtrunA17_Chr3g0105451 42.657 286 139 9 527 803 9 278 1.64e-57 198
Msa1121080 MtrunA17_Chr8g0346361 41.584 303 156 10 510 805 210 498 3.15e-57 204
Msa1121080 MtrunA17_Chr8g0346361 43.882 237 105 7 165 400 4 213 1.20e-50 185
Msa1121080 MtrunA17_Chr2g0301031 43.411 258 129 8 553 804 1 247 2.58e-54 188
Msa1121080 MtrunA17_Chr4g0026661 43.137 255 136 7 553 804 12 260 1.14e-53 187
Msa1121080 MtrunA17_Chr5g0447151 65.354 127 41 1 30 153 29 155 3.29e-53 181
Msa1121080 MtrunA17_Chr2g0312861 42.857 259 131 8 553 805 1 248 1.13e-51 182
Msa1121080 MtrunA17_Chr2g0301011 42.324 241 113 6 104 344 4 218 5.22e-49 181
Msa1121080 MtrunA17_Chr2g0301011 49.057 159 72 3 534 692 332 481 2.76e-40 155
Msa1121080 MtrunA17_Chr4g0057501 62.400 125 43 2 32 153 7 130 3.04e-48 167
Msa1121080 MtrunA17_Chr2g0312841 46.939 196 82 5 165 360 9 182 4.16e-45 160
Msa1121080 MtrunA17_Chr2g0301911 32.266 406 190 16 163 556 28 360 2.15e-44 164
Msa1121080 MtrunA17_Chr2g0301921 41.204 216 111 7 595 804 1 206 3.77e-40 147
Msa1121080 MtrunA17_Chr5g0436021 46.707 167 78 4 194 360 31 186 9.06e-40 145
Msa1121080 MtrunA17_Chr3g0103081 49.655 145 69 4 662 804 1 143 5.50e-38 138
Msa1121080 MtrunA17_Chr4g0035881 50.714 140 66 2 229 368 4 140 6.65e-34 132
Msa1121080 MtrunA17_Chr4g0035881 50.000 110 52 1 520 626 208 317 7.32e-27 112
Msa1121080 MtrunA17_Chr5g0418921 50.370 135 65 2 522 655 1 134 1.05e-30 119
Msa1121080 MtrunA17_Chr4g0071191 38.043 184 95 5 534 712 57 226 1.08e-28 115
Msa1121080 MtrunA17_Chr3g0142981 41.401 157 63 2 215 371 45 172 8.45e-28 111
Msa1121080 MtrunA17_Chr4g0057521 60.465 86 30 2 69 151 13 97 1.52e-26 106
Msa1121080 MtrunA17_Chr4g0035871 42.759 145 79 2 49 193 10 150 2.67e-25 102
Msa1121080 MtrunA17_Chr7g0261681 56.790 81 32 1 75 152 1 81 1.45e-24 99.0
Msa1121080 MtrunA17_Chr2g0301021 26.303 422 183 17 30 440 35 339 3.08e-24 105
Msa1121080 MtrunA17_Chr8g0376851 40.491 163 87 6 649 803 11 171 3.19e-24 100
Msa1121080 MtrunA17_Chr3g0143021 43.363 113 59 4 72 184 4 111 7.25e-22 91.3
Msa1121080 MtrunA17_Chr5g0436031 37.576 165 92 7 646 803 20 180 3.48e-21 92.8
Msa1121080 MtrunA17_Chr3g0143231 51.648 91 42 2 536 626 1 89 4.82e-21 88.2
Msa1121080 MtrunA17_Chr8g0346351 32.515 163 91 5 10 165 9 159 1.22e-19 87.0
Msa1121080 MtrunA17_Chr3g0142971 48.276 87 43 2 536 622 1 85 5.49e-18 79.3
Msa1121080 MtrunA17_Chr8g0354731 44.211 95 48 1 30 124 52 141 2.22e-17 80.5
Msa1121080 MtrunA17_Chr3g0142961 39.200 125 67 5 646 761 13 137 2.70e-16 76.6
Msa1121080 MtrunA17_Chr7g0248851 38.961 154 74 9 662 803 1 146 9.07e-16 75.5
Msa1121080 MtrunA17_Chr5g0398341 45.556 90 48 1 595 684 1 89 6.97e-14 68.2
Msa1121080 MtrunA17_Chr3g0077671 48.649 74 37 1 584 656 235 308 1.56e-13 72.4
Msa1121080 MtrunA17_Chr2g0312831 39.175 97 52 3 30 126 35 124 8.33e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121080 AT5G59810.1 49.875 798 337 18 19 804 29 775 0.0 723
Msa1121080 AT2G04160.1 49.872 784 338 18 32 804 32 771 0.0 709
Msa1121080 AT5G67360.1 41.323 801 406 23 12 804 11 755 0.0 545
Msa1121080 AT5G45650.2 38.620 826 397 22 28 803 23 788 1.05e-172 518
Msa1121080 AT5G45650.1 38.620 826 397 22 28 803 23 788 1.05e-172 518
Msa1121080 AT2G05920.1 39.875 800 396 23 18 801 17 747 7.03e-169 506
Msa1121080 AT1G32940.1 39.447 796 409 22 28 806 26 765 6.56e-165 497
Msa1121080 AT4G10520.1 37.683 820 424 21 1 806 1 747 1.04e-164 496
Msa1121080 AT4G10550.1 38.066 817 430 22 10 806 9 769 6.19e-164 494
Msa1121080 AT4G10550.3 38.568 796 417 21 27 806 46 785 1.10e-163 494
Msa1121080 AT3G14067.1 37.546 823 433 26 4 804 5 768 3.75e-161 488
Msa1121080 AT3G14240.1 39.450 763 375 22 74 803 61 769 1.02e-160 486
Msa1121080 AT5G51750.1 38.300 812 438 23 7 803 11 774 1.67e-159 483
Msa1121080 AT1G32940.4 39.660 764 394 21 60 806 1 714 2.93e-159 481
Msa1121080 AT1G32940.2 39.660 764 394 21 60 806 1 714 2.93e-159 481
Msa1121080 AT1G32960.1 37.093 798 429 20 26 806 27 768 8.06e-159 481
Msa1121080 AT5G11940.1 38.298 799 416 20 18 806 24 755 6.39e-157 476
Msa1121080 AT4G10550.4 38.532 763 403 20 60 806 1 713 1.30e-156 474
Msa1121080 AT4G10550.2 38.532 763 403 20 60 806 1 713 1.30e-156 474
Msa1121080 AT5G03620.1 38.667 825 399 26 15 805 9 760 3.66e-156 474
Msa1121080 AT4G10510.3 37.990 816 431 22 10 806 9 768 7.82e-156 474
Msa1121080 AT4G10530.1 36.630 819 425 21 1 806 1 738 6.40e-155 470
Msa1121080 AT4G10510.1 38.354 790 416 21 32 806 23 756 1.10e-154 470
Msa1121080 AT1G20160.1 38.142 818 425 26 7 806 10 764 4.69e-154 469
Msa1121080 AT4G34980.1 38.954 765 388 26 67 805 49 760 1.35e-153 468
Msa1121080 AT1G66210.1 37.516 805 416 27 15 806 23 753 1.57e-153 467
Msa1121080 AT1G20160.2 39.893 747 385 22 75 806 28 725 2.56e-153 466
Msa1121080 AT4G00230.1 39.467 788 390 23 26 803 33 743 3.73e-153 466
Msa1121080 AT1G32950.1 37.178 815 442 21 9 806 3 764 1.29e-152 465
Msa1121080 AT4G10540.1 36.654 813 440 20 16 806 7 766 5.44e-152 464
Msa1121080 AT5G59190.1 39.657 759 361 20 55 801 13 686 6.94e-152 461
Msa1121080 AT4G21630.1 36.967 798 399 19 30 804 38 754 2.40e-150 459
Msa1121080 AT4G10510.4 38.320 762 405 20 60 806 1 712 2.25e-149 455
Msa1121080 AT1G04110.1 38.490 821 429 24 5 806 10 773 1.06e-148 455
Msa1121080 AT5G59120.1 38.931 786 382 26 29 803 29 727 1.52e-148 453
Msa1121080 AT1G66220.1 37.808 812 412 29 13 806 11 747 1.40e-147 451
Msa1121080 AT3G46850.1 38.529 802 398 25 17 803 13 734 4.26e-147 450
Msa1121080 AT5G59100.1 39.086 788 391 26 26 803 29 737 5.57e-146 447
Msa1121080 AT5G59090.1 38.742 795 369 28 30 803 31 728 1.70e-145 446
Msa1121080 AT5G59090.2 38.742 795 364 28 30 803 31 723 1.73e-145 445
Msa1121080 AT1G32950.2 37.763 760 413 19 60 806 1 713 4.51e-145 444
Msa1121080 AT1G20150.1 36.421 799 426 24 32 806 33 773 4.76e-145 446
Msa1121080 AT5G59090.3 38.742 795 367 29 30 803 31 726 2.38e-144 442
Msa1121080 AT4G10510.2 38.019 747 398 20 75 806 1 697 3.72e-144 441
Msa1121080 AT5G59130.4 38.072 809 391 24 12 803 10 725 1.76e-143 440
Msa1121080 AT3G46840.1 38.423 799 403 26 14 803 16 734 2.16e-143 440
Msa1121080 AT5G59130.1 38.072 809 387 25 12 803 10 721 5.43e-142 436
Msa1121080 AT5G59130.3 38.292 773 378 22 42 803 2 686 4.14e-139 428
Msa1121080 AT5G45640.1 36.632 778 372 23 83 803 38 751 1.50e-137 426
Msa1121080 AT1G01900.1 36.564 815 403 25 24 803 36 771 8.78e-135 419
Msa1121080 AT5G03620.2 39.905 629 299 16 15 626 9 575 1.69e-126 391
Msa1121080 AT1G32940.3 40.325 615 299 18 28 628 26 586 1.88e-126 392
Msa1121080 AT4G21326.1 33.820 754 424 17 60 804 1 688 3.34e-124 389
Msa1121080 AT1G32970.1 34.453 804 425 24 17 806 10 725 1.24e-121 383
Msa1121080 AT4G15040.2 35.496 786 381 26 42 803 2 685 3.03e-119 375
Msa1121080 AT4G15040.1 35.496 786 381 26 42 803 2 685 3.03e-119 375
Msa1121080 AT5G67090.1 33.907 814 396 29 15 792 8 715 1.07e-118 375
Msa1121080 AT4G00230.2 38.980 608 300 16 26 630 33 572 3.50e-114 359
Msa1121080 AT2G39850.1 31.802 827 424 32 29 803 27 765 6.02e-96 317
Msa1121080 AT2G19170.1 31.671 802 455 32 46 801 54 808 2.83e-89 300
Msa1121080 AT2G19170.2 31.671 802 455 32 46 801 54 808 2.83e-89 300
Msa1121080 AT4G21650.1 42.973 370 178 9 30 377 40 398 4.01e-87 293
Msa1121080 AT4G21650.1 40.278 288 160 5 520 804 483 761 1.65e-53 199
Msa1121080 AT4G21640.1 44.538 357 167 9 30 368 40 383 1.42e-86 290
Msa1121080 AT4G21640.1 42.014 288 155 5 520 804 450 728 7.02e-55 202
Msa1121080 AT1G20160.3 35.907 557 290 18 7 554 10 508 4.87e-86 284
Msa1121080 AT4G30020.3 30.300 868 489 31 1 806 3 816 6.51e-86 290
Msa1121080 AT4G30020.1 30.300 868 489 31 1 806 3 816 6.51e-86 290
Msa1121080 AT4G30020.4 30.300 868 489 31 1 806 3 816 6.51e-86 290
Msa1121080 AT4G30020.2 30.300 868 489 31 1 806 3 816 6.51e-86 290
Msa1121080 AT4G20430.3 30.847 791 466 29 56 806 102 851 4.97e-84 286
Msa1121080 AT4G20430.1 30.847 791 466 29 56 806 102 851 4.97e-84 286
Msa1121080 AT5G59130.2 41.135 423 205 12 12 426 10 396 4.26e-82 278
Msa1121080 AT5G59130.2 42.960 277 138 7 534 803 452 715 1.01e-50 190
Msa1121080 AT5G58840.2 43.840 349 162 9 29 376 32 347 2.26e-80 266
Msa1121080 AT4G20430.2 30.215 791 447 31 56 806 102 827 2.68e-80 275
Msa1121080 AT5G58840.3 41.711 374 184 9 4 376 7 347 9.20e-80 267
Msa1121080 AT5G58840.3 45.181 166 76 4 475 626 367 531 1.42e-27 118
Msa1121080 AT5G58830.1 42.781 374 172 11 10 376 7 345 1.09e-79 271
Msa1121080 AT5G58830.1 41.071 280 142 8 534 803 439 705 2.42e-51 192
Msa1121080 AT1G30600.1 30.827 798 454 30 57 806 82 829 3.66e-79 272
Msa1121080 AT5G58840.1 41.711 374 184 9 4 376 7 347 2.20e-78 268
Msa1121080 AT5G58840.1 40.857 350 176 11 475 803 367 706 2.12e-59 215
Msa1121080 AT5G44530.1 30.625 800 466 32 50 806 83 836 7.56e-77 266
Msa1121080 AT1G62340.1 30.075 798 459 31 57 804 82 830 4.84e-76 264
Msa1121080 AT5G58820.1 42.162 370 178 11 9 376 6 341 5.46e-76 261
Msa1121080 AT5G58820.1 44.484 281 129 10 534 803 436 700 5.63e-52 194
Msa1121080 AT4G26330.2 44.375 320 163 9 67 376 13 327 1.06e-73 255
Msa1121080 AT4G26330.2 43.581 296 156 7 516 803 429 721 8.46e-65 231
Msa1121080 AT5G44530.2 29.818 825 465 33 50 806 83 861 4.41e-73 256
Msa1121080 AT4G21323.1 38.798 366 202 9 32 389 81 432 1.61e-70 248
Msa1121080 AT4G21323.1 40.604 298 159 9 515 806 511 796 1.18e-49 188
Msa1121080 AT4G26330.1 42.515 334 163 10 67 376 13 341 4.66e-70 245
Msa1121080 AT4G26330.1 43.581 296 156 7 516 803 443 735 1.17e-64 230
Msa1121080 AT5G44530.3 28.746 574 339 21 50 587 83 622 1.59e-47 179
Msa1121080 AT1G32980.1 44.920 187 99 4 591 774 3 188 7.84e-40 145
Msa1121080 AT5G59110.1 39.506 162 87 7 651 803 7 166 5.77e-22 94.4

Find 167 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACATTTAAACCAATATT+TGG 0.166325 7_3:-71070102 None:intergenic
TTGAAATTCTTATGTGCTTC+TGG 0.182762 7_3:+71069979 Msa1121080:CDS
TCCATTGCAGTTCTCCAAAT+TGG 0.226476 7_3:-71070302 None:intergenic
ATCTTCTCATTATGATTTAC+TGG 0.226804 7_3:+71064860 Msa1121080:CDS
ATGTCTTGCCCTCATGTTGC+TGG 0.236468 7_3:+71069042 Msa1121080:CDS
GTACCAGGTGCAAGCATATT+TGG 0.243200 7_3:+71067238 Msa1121080:CDS
TGTTTATGACCTAGGGATTA+AGG 0.261675 7_3:+71069951 Msa1121080:CDS
AAGAAAATGAAGATATAAAA+TGG 0.266212 7_3:-71064574 None:intergenic
TCAATCACATTACCAAATAT+TGG 0.277548 7_3:+71070090 Msa1121080:CDS
ACACGTTCTTGGGAATTTCT+TGG 0.280926 7_3:+71065260 Msa1121080:CDS
ACTGCAAATCCATTTGCTTA+TGG 0.284883 7_3:+71069886 Msa1121080:CDS
AGTATTCTCCCATTGATTCT+TGG 0.286557 7_3:-71068395 None:intergenic
TCAAAACACTTCATCTGAAT+TGG 0.287435 7_3:+71069079 Msa1121080:CDS
AATCCATTTGCTTATGGTTC+AGG 0.301567 7_3:+71069892 Msa1121080:CDS
TCCTTGAATTTCAAGAAAAT+AGG 0.302304 7_3:+71070219 Msa1121080:CDS
CCTTGTTTGCATTAGGTGTT+TGG 0.315876 7_3:+71066654 Msa1121080:intron
AAACAAACCAGGAAGCTAAT+TGG 0.317783 7_3:+71067094 Msa1121080:intron
AACTGCACACTACACGTTCT+TGG 0.318962 7_3:+71065249 Msa1121080:CDS
TTGAGACCAACACACTTTGT+AGG 0.320968 7_3:-71067311 None:intergenic
TGATTTACTGGGTTCAATCT+TGG 0.321841 7_3:+71064872 Msa1121080:CDS
TATAACACCTTTAGTATTGA+TGG 0.332691 7_3:-71068781 None:intergenic
ACCCTGAGCAACTGAACTTA+TGG 0.333650 7_3:-71068324 None:intergenic
CATTTGCGTTGAACAGTAAT+GGG 0.333841 7_3:-71070351 None:intergenic
AACATGACATTTACTTGTTC+AGG 0.339929 7_3:+71070036 Msa1121080:CDS
CCTCATGTTGCTGGGACTGC+TGG 0.348087 7_3:+71069051 Msa1121080:CDS
TTGAAGGATATGATTTCAAT+AGG 0.352218 7_3:+71067451 Msa1121080:CDS
TTAGAAGGATCAAGTGTTCC+TGG 0.357840 7_3:-71067981 None:intergenic
CCAAGGGGAAAATACCAATT+TGG 0.360143 7_3:+71070288 Msa1121080:CDS
TTCCATAAGTTCAGTTGCTC+AGG 0.365406 7_3:+71068322 Msa1121080:CDS
GTTCCTTGCATTACATTGAA+TGG 0.365594 7_3:-71069015 None:intergenic
TTGACATCTGGAGTATTGTT+TGG 0.373851 7_3:+71068059 Msa1121080:CDS
TCCTGGGTCCATTGCACTGT+TGG 0.382552 7_3:-71069926 None:intergenic
ATTGGCAATGGTACTGTAAA+AGG 0.384831 7_3:+71067262 Msa1121080:CDS
TCGCTAAAACTCTTCGATTC+CGG 0.389481 7_3:-71066677 None:intergenic
GCAACATTAGTAACACTTCC+AGG 0.398380 7_3:-71067538 None:intergenic
GATGAGTATGAAGCCATAAC+TGG 0.406220 7_3:-71068736 None:intergenic
TAGGCCCAATTCCAGCAAAA+TGG 0.407319 7_3:+71066708 Msa1121080:CDS
CAAAGAAACTTCCATGCAAC+AGG 0.408441 7_3:+71066771 Msa1121080:CDS
GATTTACTGGGTTCAATCTT+GGG 0.410597 7_3:+71064873 Msa1121080:CDS
CAAACAGCACGTGACTTTGT+AGG 0.414204 7_3:+71067175 Msa1121080:CDS
GCTTGGCAAAAGGGAAGGTT+TGG 0.418165 7_3:+71065308 Msa1121080:CDS
AGAAATCAACCAAGAATCAA+TGG 0.418991 7_3:+71068386 Msa1121080:CDS
ACAGTGTTACATTGTATACT+TGG 0.419702 7_3:+71064785 Msa1121080:intron
ACTTCGAACACTTTGACATC+TGG 0.421448 7_3:+71068047 Msa1121080:CDS
AACCCATTCTTATCTGTTTG+TGG 0.421652 7_3:-71064548 None:intergenic
TTCCTTGCATTACATTGAAT+GGG 0.423057 7_3:-71069014 None:intergenic
GATATAATCTCACTTTCTCT+TGG 0.429787 7_3:+71067397 Msa1121080:CDS
TAGGTTGCAACTCTAGCTCT+TGG 0.432129 7_3:-71067292 None:intergenic
ACTGCACACTACACGTTCTT+GGG 0.432676 7_3:+71065250 Msa1121080:CDS
TGAATCGATGTTAGCTATGA+TGG 0.434283 7_3:-71065339 None:intergenic
TATATCAACACCATCACTAA+TGG 0.435155 7_3:-71067380 None:intergenic
TCATTTGCGTTGAACAGTAA+TGG 0.436775 7_3:-71070352 None:intergenic
TTTCCACAAACAGATAAGAA+TGG 0.443420 7_3:+71064545 Msa1121080:exon
TGCATCACTTATAGGCTTGT+TGG 0.444955 7_3:-71069851 None:intergenic
GGTGCAAGCATATTTGGTAT+TGG 0.445201 7_3:+71067244 Msa1121080:CDS
TTCTTGAAATTCAAGGAACT+TGG 0.447012 7_3:-71070213 None:intergenic
TTTGCAAAAGTCCAATTGCC+TGG 0.448086 7_3:+71070171 Msa1121080:CDS
CCTGGGTCCATTGCACTGTT+GGG 0.454525 7_3:-71069925 None:intergenic
AAGAACACAGATACCACCTT+TGG 0.455443 7_3:-71065212 None:intergenic
ATCATAGCTAACATCGATTC+AGG 0.456627 7_3:+71065341 Msa1121080:CDS
CCTAGGTCATAAACAAGTCC+TGG 0.461631 7_3:-71069943 None:intergenic
TAAGTGCTGAAATGAGTTGT+TGG 0.464449 7_3:-71070008 None:intergenic
TCATATAATAAACAGATCAA+TGG 0.465118 7_3:+71065027 Msa1121080:CDS
TTCCACAAACAGATAAGAAT+GGG 0.468472 7_3:+71064546 Msa1121080:exon
GAGAAGATGTAGCAGTTTCA+AGG 0.469008 7_3:-71064845 None:intergenic
ACACCGGGCGCCGTTACATC+AGG 0.469665 7_3:-71068922 None:intergenic
TCAGGGTCAAGAAGCTAAAT+CGG 0.471069 7_3:+71068340 Msa1121080:CDS
ATATTTGGTAATGTGATTGA+AGG 0.474775 7_3:-71070087 None:intergenic
CAGCCTGATGTAACGGCGCC+CGG 0.476551 7_3:+71068919 Msa1121080:intron
TGCACTTGCAAACAATGAAT+AGG 0.477779 7_3:-71068959 None:intergenic
TATCAACTCAGCTTGGCAAA+AGG 0.479025 7_3:+71065298 Msa1121080:CDS
CCAGGACTTGTTTATGACCT+AGG 0.481515 7_3:+71069943 Msa1121080:CDS
CTCGTATAGTCACCAATGTT+GGG 0.482371 7_3:+71070133 Msa1121080:CDS
GGAGAACTGCAATGGACAAA+TGG 0.483947 7_3:+71070309 Msa1121080:CDS
AAGAAAGCCAGCTCCAGTTA+TGG 0.487825 7_3:+71068723 Msa1121080:CDS
AGCTAAATCGGCAAGAGCAA+AGG 0.489923 7_3:+71068352 Msa1121080:CDS
CGTGCTGTTTGTTGCGAACG+AGG 0.491310 7_3:-71067163 None:intergenic
GCTAAATCGGCAAGAGCAAA+GGG 0.491366 7_3:+71068353 Msa1121080:CDS
TGTCCTGAACCATAAGCAAA+TGG 0.492197 7_3:-71069895 None:intergenic
TCAAGTAATCCTTAATCCCT+AGG 0.492292 7_3:-71069960 None:intergenic
ATCAACTCAGCTTGGCAAAA+GGG 0.493211 7_3:+71065299 Msa1121080:CDS
GTTGCATCTGCTGGAAATGA+TGG 0.500160 7_3:+71067508 Msa1121080:CDS
TGTTACTAATGTTGCTCCAT+GGG 0.500288 7_3:+71067546 Msa1121080:CDS
CAGGACTTGTTTATGACCTA+GGG 0.508407 7_3:+71069944 Msa1121080:CDS
TAACCAGTCTTTCACTCTAG+TGG 0.508663 7_3:+71067779 Msa1121080:CDS
TGTCTTGCCCTCATGTTGCT+GGG 0.508905 7_3:+71069043 Msa1121080:CDS
GTGTTACTAATGTTGCTCCA+TGG 0.513688 7_3:+71067545 Msa1121080:CDS
AGCAGTTTCAAGGTCAATAG+AGG 0.514083 7_3:-71064835 None:intergenic
CGCATCTCGATTTGTCACAT+TGG 0.514200 7_3:-71067823 None:intergenic
TTTGCAAAATATGTACTTGG+TGG 0.517980 7_3:-71070156 None:intergenic
TTAACAAGAGGACATAGTAT+AGG 0.518469 7_3:+71068470 Msa1121080:CDS
GAAATCAACCAAGAATCAAT+GGG 0.518554 7_3:+71068387 Msa1121080:CDS
CAAATGGAAAGCATATTGTA+AGG 0.521262 7_3:+71070325 Msa1121080:CDS
TTCAAGGTCAATAGAGGAAG+GGG 0.521481 7_3:-71064829 None:intergenic
TATGAAGCCATAACTGGAGC+TGG 0.522115 7_3:-71068730 None:intergenic
TTTGTTTCAGCCTGATGTAA+CGG 0.526895 7_3:+71068912 Msa1121080:intron
ACTCGTATAGTCACCAATGT+TGG 0.529854 7_3:+71070132 Msa1121080:CDS
TAAATATTCAACCTGTTGCA+TGG 0.530300 7_3:-71066782 None:intergenic
AGCATATTTGGTATTGGCAA+TGG 0.531485 7_3:+71067250 Msa1121080:CDS
CTTGTTGGTGTTATCTCTTG+TGG 0.532291 7_3:-71069836 None:intergenic
CAATTCCAGCAAAATGGCGT+GGG 0.534400 7_3:+71066714 Msa1121080:CDS
ACTAGAGTGAAAGACTGGTT+AGG 0.537957 7_3:-71067777 None:intergenic
TACTGGGTTCAATCTTGGGA+AGG 0.541104 7_3:+71064877 Msa1121080:CDS
GTTTGCATTAGGTGTTTGGC+CGG 0.542398 7_3:+71066658 Msa1121080:intron
CAGTGTTACATTGTATACTT+GGG 0.543630 7_3:+71064786 Msa1121080:intron
TTCCCATTCAATGTAATGCA+AGG 0.545135 7_3:+71069012 Msa1121080:CDS
AAAGCATATGAACGTGATAA+CGG 0.548391 7_3:+71067133 Msa1121080:CDS
ACCAATTTGGAGAACTGCAA+TGG 0.549150 7_3:+71070301 Msa1121080:CDS
AATTCAGCCATCAATACTAA+AGG 0.549273 7_3:+71068774 Msa1121080:CDS
TCTTCTCATTATGATTTACT+GGG 0.550509 7_3:+71064861 Msa1121080:CDS
AAGCAACAAGTGTGACTCCA+AGG 0.551446 7_3:+71070271 Msa1121080:CDS
TTAGTAACACTTCCAGGGGT+TGG 0.551643 7_3:-71067532 None:intergenic
CTTGATCCTTCTAAAGCAAG+TGG 0.551880 7_3:+71067990 Msa1121080:CDS
GGAAATGATGGACCAACCCC+TGG 0.555158 7_3:+71067520 Msa1121080:CDS
CAACATTAGTAACACTTCCA+GGG 0.558988 7_3:-71067537 None:intergenic
TTTCACTCTAGTGGATTCTA+CGG 0.562821 7_3:+71067788 Msa1121080:CDS
GTTTCAAGGTCAATAGAGGA+AGG 0.562899 7_3:-71064831 None:intergenic
GCATGTGGAAACTTCGTACC+AGG 0.563077 7_3:+71067223 Msa1121080:CDS
AATCCACTAGAGTGAAAGAC+TGG 0.563936 7_3:-71067782 None:intergenic
TAGTGGCGTGTGTTCGAGAA+GGG 0.565122 7_3:+71068018 Msa1121080:CDS
ATTGATGGCTGAATTTCACT+TGG 0.567441 7_3:-71068766 None:intergenic
ACTCAGCTTGGCAAAAGGGA+AGG 0.568546 7_3:+71065303 Msa1121080:CDS
TGGCAAGTTTACAAATAGAC+TGG 0.568946 7_3:-71067754 None:intergenic
TCCATAAGTTCAGTTGCTCA+GGG 0.569952 7_3:+71068323 Msa1121080:CDS
CCAATTCCAGCAAAATGGCG+TGG 0.570080 7_3:+71066713 Msa1121080:CDS
TTCAGCAGTACTATGACCAT+TGG 0.573655 7_3:+71067604 Msa1121080:CDS
CAAATGATATCAACTCAGCT+TGG 0.575551 7_3:+71065291 Msa1121080:CDS
ATAGCTGATTTAATAGCCGC+AGG 0.576830 7_3:-71069105 None:intergenic
CTAGGTCATAAACAAGTCCT+GGG 0.579565 7_3:-71069942 None:intergenic
AGCAACAAGTGTGACTCCAA+GGG 0.583540 7_3:+71070272 Msa1121080:CDS
GACAAGCATCAATTAACAAG+AGG 0.583591 7_3:+71068458 Msa1121080:CDS
TGTCAAATTAACAAACTCAA+AGG 0.583636 7_3:+71066746 Msa1121080:CDS
ATAGTGGCGTGTGTTCGAGA+AGG 0.586353 7_3:+71068017 Msa1121080:CDS
TATTCAACCCAACAGTGCAA+TGG 0.598990 7_3:+71069918 Msa1121080:CDS
TTTCAAGGTCAATAGAGGAA+GGG 0.599454 7_3:-71064830 None:intergenic
GCAGCAACTGTGAATACCCA+TGG 0.603326 7_3:-71067562 None:intergenic
GGCTGCAAGTATGTTCACAC+CGG 0.606481 7_3:-71068938 None:intergenic
CCAGCAGTCCCAGCAACATG+AGG 0.615901 7_3:-71069051 None:intergenic
GGCAATGGTACTGTAAAAGG+TGG 0.617624 7_3:+71067265 Msa1121080:CDS
ATACCAAATATGCTTGCACC+TGG 0.619034 7_3:-71067241 None:intergenic
AAATCAGCTATCATGACCAC+CGG 0.620394 7_3:+71069117 Msa1121080:CDS
AGTACTATTACAGATTCTCA+AGG 0.622986 7_3:+71067424 Msa1121080:CDS
GCACGTGACTTTGTAGGCCA+CGG 0.623264 7_3:+71067181 Msa1121080:CDS
TGTACTTGGTGGCCCAACAT+TGG 0.624573 7_3:-71070145 None:intergenic
CCCAACAGTGCAATGGACCC+AGG 0.625551 7_3:+71069925 Msa1121080:CDS
CCTATATGCAGAAAATCCAA+AGG 0.629857 7_3:+71065196 Msa1121080:intron
TTGCAACCTACAAAGTGTGT+TGG 0.630247 7_3:+71067305 Msa1121080:CDS
CAGCAGTCCCAGCAACATGA+GGG 0.631088 7_3:-71069050 None:intergenic
AACATTAGTAACACTTCCAG+GGG 0.631324 7_3:-71067536 None:intergenic
ATGGCTTCATACTCATCTAG+AGG 0.632404 7_3:+71068742 Msa1121080:CDS
AGGTCAATAGAGGAAGGGGT+TGG 0.633028 7_3:-71064825 None:intergenic
AAACCTCGACGATTGTCTGT+TGG 0.633358 7_3:-71068991 None:intergenic
CATTGGTAACAAAACTGTCA+CGG 0.634113 7_3:+71067621 Msa1121080:CDS
AATTCCAGCAAAATGGCGTG+GGG 0.638524 7_3:+71066715 Msa1121080:CDS
AGAGTGAAAGACTGGTTAGG+TGG 0.647696 7_3:-71067774 None:intergenic
TCATCTGAATTGGAGTCCTG+CGG 0.650874 7_3:+71069089 Msa1121080:CDS
GCTGCAAGTATGTTCACACC+GGG 0.652846 7_3:-71068937 None:intergenic
AGTGGCGTGTGTTCGAGAAG+GGG 0.653022 7_3:+71068019 Msa1121080:CDS
TACTTGGGAGCACATTCACA+TGG 0.657270 7_3:+71064801 Msa1121080:CDS
GCAACAAGTGTGACTCCAAG+GGG 0.669485 7_3:+71070273 Msa1121080:CDS
CATACACTATCAACAGCATG+TGG 0.670621 7_3:+71067208 Msa1121080:CDS
ATATGCAGAAAATCCAAAGG+TGG 0.670832 7_3:+71065199 Msa1121080:intron
TTGATAGTAGACAAAACATG+AGG 0.676401 7_3:-71068428 None:intergenic
ATTGAGCAAGCCATTAGTGA+TGG 0.685160 7_3:+71067370 Msa1121080:CDS
ATTCCAGCAAAATGGCGTGG+GGG 0.708593 7_3:+71066716 Msa1121080:CDS
TTGATAGTGTATGCGTACCG+TGG 0.721153 7_3:-71067198 None:intergenic
TTACCAACAGACAATCGTCG+AGG 0.726503 7_3:+71068988 Msa1121080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTGTATTCA+AGG + chr7_3:71065730-71065749 Msa1121080:intron 10.0%
!! TGTAATTCTTAAAAATAAAT+TGG - chr7_3:71066924-71066943 None:intergenic 10.0%
!! AAGAAAATGAAGATATAAAA+TGG - chr7_3:71064577-71064596 None:intergenic 15.0%
!!! ATTAAATAAACGATTTTGAT+TGG - chr7_3:71065414-71065433 None:intergenic 15.0%
!!! CTAAAATAGAAATACAATTT+TGG - chr7_3:71066146-71066165 None:intergenic 15.0%
!! TTGTAATAATTAAATCAAGT+TGG + chr7_3:71066445-71066464 Msa1121080:intron 15.0%
!! TAATTTACTTTGAATAGTTT+AGG - chr7_3:71066633-71066652 None:intergenic 15.0%
!! TTTAAATTAATTTCATCTAC+AGG + chr7_3:71068275-71068294 Msa1121080:intron 15.0%
!! ATATATAGTTAATAATTACG+TGG - chr7_3:71068504-71068523 None:intergenic 15.0%
!! TATACAATCATAATTGATAT+TGG + chr7_3:71069185-71069204 Msa1121080:intron 15.0%
!! ATGATTTCATATATATGATT+AGG - chr7_3:71069290-71069309 None:intergenic 15.0%
!! ATCATATATAACAATTGTAT+AGG + chr7_3:71069755-71069774 Msa1121080:intron 15.0%
!! TAACACTGTAAATGATAAAT+AGG - chr7_3:71064774-71064793 None:intergenic 20.0%
!! GATTGATTAACTAATATGTA+TGG + chr7_3:71064962-71064981 Msa1121080:intron 20.0%
!! TCATATAATAAACAGATCAA+TGG + chr7_3:71065027-71065046 Msa1121080:CDS 20.0%
!!! ATTTTTTATACTCTTTATGC+TGG - chr7_3:71065533-71065552 None:intergenic 20.0%
!! ACTACAAAGAAAAACATTAT+CGG + chr7_3:71065565-71065584 Msa1121080:intron 20.0%
!!! ACACACAAATTTGTTTTTAA+GGG + chr7_3:71066017-71066036 Msa1121080:intron 20.0%
!! ATTATAAATTAATGGCGAAT+AGG - chr7_3:71066208-71066227 None:intergenic 20.0%
!! TCACTGAGATTATAAATTAA+TGG - chr7_3:71066216-71066235 None:intergenic 20.0%
!! CTTAGATTAATTAACCTATA+TGG + chr7_3:71066304-71066323 Msa1121080:intron 20.0%
!!! TTTATTTGAAATTTGCGAAA+GGG + chr7_3:71066401-71066420 Msa1121080:intron 20.0%
!!! TCAATACAATGTTTTTACTT+AGG - chr7_3:71066819-71066838 None:intergenic 20.0%
!!! AAATTGGAGAAAGATTATTT+TGG - chr7_3:71066908-71066927 None:intergenic 20.0%
!!! TTTCCAACTTTTATATTACT+AGG + chr7_3:71067728-71067747 Msa1121080:intron 20.0%
!!! TTCCAACTTTTATATTACTA+GGG + chr7_3:71067729-71067748 Msa1121080:intron 20.0%
!! TTTGTAAAGAAAAATTCTGT+TGG - chr7_3:71067861-71067880 None:intergenic 20.0%
!! TTATCGAATAAATGATGAAT+AGG - chr7_3:71068087-71068106 None:intergenic 20.0%
!! ATTCATCATTTATTCGATAA+TGG + chr7_3:71068087-71068106 Msa1121080:intron 20.0%
!! TTCATCATTTATTCGATAAT+GGG + chr7_3:71068088-71068107 Msa1121080:intron 20.0%
!! TACATGATTTCACTAAAAAA+AGG - chr7_3:71068530-71068549 None:intergenic 20.0%
!! GACTATTATCAAGATTATAT+AGG + chr7_3:71069247-71069266 Msa1121080:intron 20.0%
!!! TTCATCTTCTATTTTAACAT+AGG - chr7_3:71069498-71069517 None:intergenic 20.0%
!! ACAACATTTAAACCAATATT+TGG - chr7_3:71070105-71070124 None:intergenic 20.0%
!! TCTAATTTTCACATTTTTGC+TGG + chr7_3:71064608-71064627 Msa1121080:CDS 25.0%
! ATCTATATGTTTGTGTGATT+AGG - chr7_3:71064674-71064693 None:intergenic 25.0%
! ATCTTCTCATTATGATTTAC+TGG + chr7_3:71064860-71064879 Msa1121080:CDS 25.0%
! TCTTCTCATTATGATTTACT+GGG + chr7_3:71064861-71064880 Msa1121080:CDS 25.0%
! TATAGAGCATAGAATTATTG+TGG - chr7_3:71065387-71065406 None:intergenic 25.0%
! ACTAAATACATAAGAGTCTT+TGG + chr7_3:71065675-71065694 Msa1121080:intron 25.0%
!! AAACCGTATTTAGTTTAACA+AGG - chr7_3:71065702-71065721 None:intergenic 25.0%
!! ATGAGATGTTAACTTTTGAT+TGG - chr7_3:71065804-71065823 None:intergenic 25.0%
!!! GACACACAAATTTGTTTTTA+AGG + chr7_3:71066016-71066035 Msa1121080:intron 25.0%
!!! AATGTTTGCTATTGAACAAT+TGG + chr7_3:71066261-71066280 Msa1121080:intron 25.0%
! CTTTCGCAAATTTCAAATAA+AGG - chr7_3:71066402-71066421 None:intergenic 25.0%
!! CTTTATTTGAAATTTGCGAA+AGG + chr7_3:71066400-71066419 Msa1121080:intron 25.0%
!! AAATTATCCTTGTTTGCATT+AGG + chr7_3:71066647-71066666 Msa1121080:intron 25.0%
! TGTCAAATTAACAAACTCAA+AGG + chr7_3:71066746-71066765 Msa1121080:CDS 25.0%
! CTTATTAATTGTTGTGCATA+AGG - chr7_3:71066862-71066881 None:intergenic 25.0%
! CTTATGCACAACAATTAATA+AGG + chr7_3:71066860-71066879 Msa1121080:intron 25.0%
! TCCTATTACATAACTCTTTA+CGG + chr7_3:71066945-71066964 Msa1121080:intron 25.0%
! ATTCTTAATCAGATTCAAAG+AGG - chr7_3:71066979-71066998 None:intergenic 25.0%
! TTGAAGGATATGATTTCAAT+AGG + chr7_3:71067451-71067470 Msa1121080:CDS 25.0%
! AATCATCATCAACATAGATT+TGG + chr7_3:71067696-71067715 Msa1121080:intron 25.0%
! CAATGATACGCATATAAAAA+AGG - chr7_3:71067945-71067964 None:intergenic 25.0%
!!! ATTTTGCTTTCTTTGAGAAT+AGG - chr7_3:71068193-71068212 None:intergenic 25.0%
!! CTTATGGAAAATTCTTTTCT+TGG - chr7_3:71068311-71068330 None:intergenic 25.0%
!! TATAACACCTTTAGTATTGA+TGG - chr7_3:71068784-71068803 None:intergenic 25.0%
!!! CTGTCTTTATTTCTATTCAA+TGG + chr7_3:71068858-71068877 Msa1121080:intron 25.0%
! AATGTTGAAGAGGATAAAAT+TGG + chr7_3:71069393-71069412 Msa1121080:intron 25.0%
!!! ATATTTGGTAATGTGATTGA+AGG - chr7_3:71070090-71070109 None:intergenic 25.0%
! TCAATCACATTACCAAATAT+TGG + chr7_3:71070090-71070109 Msa1121080:CDS 25.0%
!! ACTTTTGCAAAATATGTACT+TGG - chr7_3:71070162-71070181 None:intergenic 25.0%
! TCCTTGAATTTCAAGAAAAT+AGG + chr7_3:71070219-71070238 Msa1121080:CDS 25.0%
!! ACCTATTTTCTTGAAATTCA+AGG - chr7_3:71070223-71070242 None:intergenic 25.0%
TTTCCACAAACAGATAAGAA+TGG + chr7_3:71064545-71064564 Msa1121080:exon 30.0%
TTCCACAAACAGATAAGAAT+GGG + chr7_3:71064546-71064565 Msa1121080:exon 30.0%
TAATGTTCACGCTAGAAAAA+AGG + chr7_3:71064632-71064651 Msa1121080:CDS 30.0%
ACAGTGTTACATTGTATACT+TGG + chr7_3:71064785-71064804 Msa1121080:intron 30.0%
CAGTGTTACATTGTATACTT+GGG + chr7_3:71064786-71064805 Msa1121080:intron 30.0%
GAGCAAGTAAAATATTGCAA+TGG - chr7_3:71064924-71064943 None:intergenic 30.0%
GGTCCTTGTTAAACTAAATA+CGG + chr7_3:71065696-71065715 Msa1121080:intron 30.0%
TAGTCACATGACTAACTAAT+AGG + chr7_3:71065766-71065785 Msa1121080:intron 30.0%
! TGTTCTTATGACACTTGTTA+TGG - chr7_3:71066172-71066191 None:intergenic 30.0%
AAACATTATCCCAACATTGA+TGG - chr7_3:71066248-71066267 None:intergenic 30.0%
!! AATTAAATCAAGTTGGTCAC+AGG + chr7_3:71066452-71066471 Msa1121080:intron 30.0%
TAAATATTCAACCTGTTGCA+TGG - chr7_3:71066785-71066804 None:intergenic 30.0%
AAAGCATATGAACGTGATAA+CGG + chr7_3:71067133-71067152 Msa1121080:CDS 30.0%
TATATCAACACCATCACTAA+TGG - chr7_3:71067383-71067402 None:intergenic 30.0%
GATATAATCTCACTTTCTCT+TGG + chr7_3:71067397-71067416 Msa1121080:CDS 30.0%
AGTACTATTACAGATTCTCA+AGG + chr7_3:71067424-71067443 Msa1121080:CDS 30.0%
! AGATTCTCAAGGAATTTTGA+AGG + chr7_3:71067435-71067454 Msa1121080:CDS 30.0%
! ATTTTATTAGTTGCATCTGC+TGG + chr7_3:71067499-71067518 Msa1121080:CDS 30.0%
CTCCCTAGTAATATAAAAGT+TGG - chr7_3:71067734-71067753 None:intergenic 30.0%
!! ATTTTTCCACTTGCTTTAGA+AGG - chr7_3:71067999-71068018 None:intergenic 30.0%
TAAAGCAAGTGGAAAAATAG+TGG + chr7_3:71068001-71068020 Msa1121080:CDS 30.0%
! GAATGAGATCACATTAGTTT+AGG - chr7_3:71068221-71068240 None:intergenic 30.0%
AGAAATCAACCAAGAATCAA+TGG + chr7_3:71068386-71068405 Msa1121080:CDS 30.0%
GAAATCAACCAAGAATCAAT+GGG + chr7_3:71068387-71068406 Msa1121080:CDS 30.0%
! TTGATAGTAGACAAAACATG+AGG - chr7_3:71068431-71068450 None:intergenic 30.0%
TTAACAAGAGGACATAGTAT+AGG + chr7_3:71068470-71068489 Msa1121080:CDS 30.0%
!!! TTTTTGGTTGATAGCAAGAA+GGG - chr7_3:71068561-71068580 None:intergenic 30.0%
!!! TTTTTTGGTTGATAGCAAGA+AGG - chr7_3:71068562-71068581 None:intergenic 30.0%
AATTCAGCCATCAATACTAA+AGG + chr7_3:71068774-71068793 Msa1121080:CDS 30.0%
TTCCTTGCATTACATTGAAT+GGG - chr7_3:71069017-71069036 None:intergenic 30.0%
TCAAAACACTTCATCTGAAT+TGG + chr7_3:71069079-71069098 Msa1121080:CDS 30.0%
TTCATTGATCAATGTTGAAG+AGG + chr7_3:71069383-71069402 Msa1121080:intron 30.0%
!! TGATAAATGTGAGTTTGTTG+AGG - chr7_3:71069448-71069467 None:intergenic 30.0%
CTCACATTTATCACTAGATT+TGG + chr7_3:71069455-71069474 Msa1121080:intron 30.0%
! TATCACTAGATTTGGTCATT+TGG + chr7_3:71069463-71069482 Msa1121080:intron 30.0%
GATAATAAGTGTGATTGTAG+AGG - chr7_3:71069726-71069745 None:intergenic 30.0%
! TTTTCGAATGCATCACTTAT+AGG - chr7_3:71069862-71069881 None:intergenic 30.0%
TTGAAATTCTTATGTGCTTC+TGG + chr7_3:71069979-71069998 Msa1121080:CDS 30.0%
AACATGACATTTACTTGTTC+AGG + chr7_3:71070036-71070055 Msa1121080:CDS 30.0%
TTTGCAAAATATGTACTTGG+TGG - chr7_3:71070159-71070178 None:intergenic 30.0%
! CAATTTTATATCCAGGCAAT+TGG - chr7_3:71070185-71070204 None:intergenic 30.0%
! ACAACAGCAATTTTATATCC+AGG - chr7_3:71070192-71070211 None:intergenic 30.0%
TTCTTGAAATTCAAGGAACT+TGG - chr7_3:71070216-71070235 None:intergenic 30.0%
! CAAATGGAAAGCATATTGTA+AGG + chr7_3:71070325-71070344 Msa1121080:CDS 30.0%
AACCCATTCTTATCTGTTTG+TGG - chr7_3:71064551-71064570 None:intergenic 35.0%
GTGTGATTAGGAAGCAAATT+TGG - chr7_3:71064662-71064681 None:intergenic 35.0%
TTTCAAGGTCAATAGAGGAA+GGG - chr7_3:71064833-71064852 None:intergenic 35.0%
TGATTTACTGGGTTCAATCT+TGG + chr7_3:71064872-71064891 Msa1121080:CDS 35.0%
GATTTACTGGGTTCAATCTT+GGG + chr7_3:71064873-71064892 Msa1121080:CDS 35.0%
AGTGAGTAACAGAATTAGCA+TGG + chr7_3:71065093-71065112 Msa1121080:intron 35.0%
CTACAAAATGTTTGTGACAG+TGG - chr7_3:71065121-71065140 None:intergenic 35.0%
! CCTTTGGATTTTCTGCATAT+AGG - chr7_3:71065199-71065218 None:intergenic 35.0%
CCTATATGCAGAAAATCCAA+AGG + chr7_3:71065196-71065215 Msa1121080:intron 35.0%
ATATGCAGAAAATCCAAAGG+TGG + chr7_3:71065199-71065218 Msa1121080:intron 35.0%
CAAATGATATCAACTCAGCT+TGG + chr7_3:71065291-71065310 Msa1121080:CDS 35.0%
TGAATCGATGTTAGCTATGA+TGG - chr7_3:71065342-71065361 None:intergenic 35.0%
!! ATCATAGCTAACATCGATTC+AGG + chr7_3:71065341-71065360 Msa1121080:CDS 35.0%
GAGAAATCAGTAGAAAAACG+AGG + chr7_3:71065921-71065940 Msa1121080:intron 35.0%
AATCAGTAGAAAAACGAGGT+AGG + chr7_3:71065925-71065944 Msa1121080:intron 35.0%
ATCAGTAGAAAAACGAGGTA+GGG + chr7_3:71065926-71065945 Msa1121080:intron 35.0%
ACTTGATAGACCATCAATGT+TGG + chr7_3:71066235-71066254 Msa1121080:intron 35.0%
CTTGATAGACCATCAATGTT+GGG + chr7_3:71066236-71066255 Msa1121080:intron 35.0%
! ATTTGAAATTTGCGAAAGGG+AGG + chr7_3:71066404-71066423 Msa1121080:intron 35.0%
GCCGTAAAGAGTTATGTAAT+AGG - chr7_3:71066949-71066968 None:intergenic 35.0%
TTGCACTACATAAACAAACC+AGG + chr7_3:71067083-71067102 Msa1121080:intron 35.0%
AAACAAACCAGGAAGCTAAT+TGG + chr7_3:71067094-71067113 Msa1121080:intron 35.0%
!! AGCATATTTGGTATTGGCAA+TGG + chr7_3:71067250-71067269 Msa1121080:CDS 35.0%
ATTGGCAATGGTACTGTAAA+AGG + chr7_3:71067262-71067281 Msa1121080:CDS 35.0%
AACATTAGTAACACTTCCAG+GGG - chr7_3:71067539-71067558 None:intergenic 35.0%
CAACATTAGTAACACTTCCA+GGG - chr7_3:71067540-71067559 None:intergenic 35.0%
TGTTACTAATGTTGCTCCAT+GGG + chr7_3:71067546-71067565 Msa1121080:CDS 35.0%
! CATTGGTAACAAAACTGTCA+CGG + chr7_3:71067621-71067640 Msa1121080:CDS 35.0%
AAACTGTCACGGTAATATTC+TGG + chr7_3:71067632-71067651 Msa1121080:intron 35.0%
TGGCAAGTTTACAAATAGAC+TGG - chr7_3:71067757-71067776 None:intergenic 35.0%
!! TTTCACTCTAGTGGATTCTA+CGG + chr7_3:71067788-71067807 Msa1121080:CDS 35.0%
!! TTGACATCTGGAGTATTGTT+TGG + chr7_3:71068059-71068078 Msa1121080:CDS 35.0%
! CTTTGAGAATAGGTGGTTTA+GGG - chr7_3:71068183-71068202 None:intergenic 35.0%
! TCTTTGAGAATAGGTGGTTT+AGG - chr7_3:71068184-71068203 None:intergenic 35.0%
! TTGCTTTCTTTGAGAATAGG+TGG - chr7_3:71068190-71068209 None:intergenic 35.0%
!! AGTATTCTCCCATTGATTCT+TGG - chr7_3:71068398-71068417 None:intergenic 35.0%
GACAAGCATCAATTAACAAG+AGG + chr7_3:71068458-71068477 Msa1121080:CDS 35.0%
TCACAAGCAAAAACACTCAT+TGG + chr7_3:71068700-71068719 Msa1121080:CDS 35.0%
! ATTGATGGCTGAATTTCACT+TGG - chr7_3:71068769-71068788 None:intergenic 35.0%
TTTGTTTCAGCCTGATGTAA+CGG + chr7_3:71068912-71068931 Msa1121080:intron 35.0%
TGCACTTGCAAACAATGAAT+AGG - chr7_3:71068962-71068981 None:intergenic 35.0%
TTCCCATTCAATGTAATGCA+AGG + chr7_3:71069012-71069031 Msa1121080:CDS 35.0%
GTTCCTTGCATTACATTGAA+TGG - chr7_3:71069018-71069037 None:intergenic 35.0%
TAGAGTGAGAGAGAAAATAC+CGG - chr7_3:71069139-71069158 None:intergenic 35.0%
GTTGAAGAGGATAAAATTGG+TGG + chr7_3:71069396-71069415 Msa1121080:intron 35.0%
GTTAGAAAACAGCTAACAAG+CGG + chr7_3:71069673-71069692 Msa1121080:intron 35.0%
TGTGATTGTAGAGGTTACTT+GGG - chr7_3:71069717-71069736 None:intergenic 35.0%
ACTGCAAATCCATTTGCTTA+TGG + chr7_3:71069886-71069905 Msa1121080:CDS 35.0%
AATCCATTTGCTTATGGTTC+AGG + chr7_3:71069892-71069911 Msa1121080:CDS 35.0%
TGTTTATGACCTAGGGATTA+AGG + chr7_3:71069951-71069970 Msa1121080:CDS 35.0%
TCAAGTAATCCTTAATCCCT+AGG - chr7_3:71069963-71069982 None:intergenic 35.0%
!! TAAGTGCTGAAATGAGTTGT+TGG - chr7_3:71070011-71070030 None:intergenic 35.0%
CATTTGCGTTGAACAGTAAT+GGG - chr7_3:71070354-71070373 None:intergenic 35.0%
TCATTTGCGTTGAACAGTAA+TGG - chr7_3:71070355-71070374 None:intergenic 35.0%
TTCAAGGTCAATAGAGGAAG+GGG - chr7_3:71064832-71064851 None:intergenic 40.0%
GTTTCAAGGTCAATAGAGGA+AGG - chr7_3:71064834-71064853 None:intergenic 40.0%
AGCAGTTTCAAGGTCAATAG+AGG - chr7_3:71064838-71064857 None:intergenic 40.0%
GAGAAGATGTAGCAGTTTCA+AGG - chr7_3:71064848-71064867 None:intergenic 40.0%
AAGAACACAGATACCACCTT+TGG - chr7_3:71065215-71065234 None:intergenic 40.0%
ACACGTTCTTGGGAATTTCT+TGG + chr7_3:71065260-71065279 Msa1121080:CDS 40.0%
TATCAACTCAGCTTGGCAAA+AGG + chr7_3:71065298-71065317 Msa1121080:CDS 40.0%
ATCAACTCAGCTTGGCAAAA+GGG + chr7_3:71065299-71065318 Msa1121080:CDS 40.0%
AGTTGAACCAACCAACAGAT+TGG - chr7_3:71065658-71065677 None:intergenic 40.0%
TCAGTAGAAAAACGAGGTAG+GGG + chr7_3:71065927-71065946 Msa1121080:intron 40.0%
! CGTGGTTTTTGTCTCCATAT+AGG - chr7_3:71066321-71066340 None:intergenic 40.0%
CCAAACACCTAATGCAAACA+AGG - chr7_3:71066657-71066676 None:intergenic 40.0%
! CCTTGTTTGCATTAGGTGTT+TGG + chr7_3:71066654-71066673 Msa1121080:intron 40.0%
TCGCTAAAACTCTTCGATTC+CGG - chr7_3:71066680-71066699 None:intergenic 40.0%
!! AGTTTTAGCGACAGAGGAAT+AGG + chr7_3:71066689-71066708 Msa1121080:CDS 40.0%
CAAAGAAACTTCCATGCAAC+AGG + chr7_3:71066771-71066790 Msa1121080:CDS 40.0%
CATACACTATCAACAGCATG+TGG + chr7_3:71067208-71067227 Msa1121080:CDS 40.0%
ATACCAAATATGCTTGCACC+TGG - chr7_3:71067244-71067263 None:intergenic 40.0%
GGTGCAAGCATATTTGGTAT+TGG + chr7_3:71067244-71067263 Msa1121080:CDS 40.0%
TTGCAACCTACAAAGTGTGT+TGG + chr7_3:71067305-71067324 Msa1121080:CDS 40.0%
TTGAGACCAACACACTTTGT+AGG - chr7_3:71067314-71067333 None:intergenic 40.0%
ATTGAGCAAGCCATTAGTGA+TGG + chr7_3:71067370-71067389 Msa1121080:CDS 40.0%
GCAACATTAGTAACACTTCC+AGG - chr7_3:71067541-71067560 None:intergenic 40.0%
! GTGTTACTAATGTTGCTCCA+TGG + chr7_3:71067545-71067564 Msa1121080:CDS 40.0%
TTCAGCAGTACTATGACCAT+TGG + chr7_3:71067604-71067623 Msa1121080:CDS 40.0%
!!! CGTGACAGTTTTGTTACCAA+TGG - chr7_3:71067623-71067642 None:intergenic 40.0%
! ACTAGAGTGAAAGACTGGTT+AGG - chr7_3:71067780-71067799 None:intergenic 40.0%
TAACCAGTCTTTCACTCTAG+TGG + chr7_3:71067779-71067798 Msa1121080:CDS 40.0%
AATCCACTAGAGTGAAAGAC+TGG - chr7_3:71067785-71067804 None:intergenic 40.0%
TTAGAAGGATCAAGTGTTCC+TGG - chr7_3:71067984-71068003 None:intergenic 40.0%
!! CTTGATCCTTCTAAAGCAAG+TGG + chr7_3:71067990-71068009 Msa1121080:CDS 40.0%
ACTTCGAACACTTTGACATC+TGG + chr7_3:71068047-71068066 Msa1121080:CDS 40.0%
TTCCATAAGTTCAGTTGCTC+AGG + chr7_3:71068322-71068341 Msa1121080:CDS 40.0%
TCCATAAGTTCAGTTGCTCA+GGG + chr7_3:71068323-71068342 Msa1121080:CDS 40.0%
TCAGGGTCAAGAAGCTAAAT+CGG + chr7_3:71068340-71068359 Msa1121080:CDS 40.0%
GATGAGTATGAAGCCATAAC+TGG - chr7_3:71068739-71068758 None:intergenic 40.0%
ATGGCTTCATACTCATCTAG+AGG + chr7_3:71068742-71068761 Msa1121080:CDS 40.0%
! ATAGCTGATTTAATAGCCGC+AGG - chr7_3:71069108-71069127 None:intergenic 40.0%
AAATCAGCTATCATGACCAC+CGG + chr7_3:71069117-71069136 Msa1121080:CDS 40.0%
GTGTGATTGTAGAGGTTACT+TGG - chr7_3:71069718-71069737 None:intergenic 40.0%
!! CTTGTTGGTGTTATCTCTTG+TGG - chr7_3:71069839-71069858 None:intergenic 40.0%
TGCATCACTTATAGGCTTGT+TGG - chr7_3:71069854-71069873 None:intergenic 40.0%
TGTCCTGAACCATAAGCAAA+TGG - chr7_3:71069898-71069917 None:intergenic 40.0%
TATTCAACCCAACAGTGCAA+TGG + chr7_3:71069918-71069937 Msa1121080:CDS 40.0%
CTAGGTCATAAACAAGTCCT+GGG - chr7_3:71069945-71069964 None:intergenic 40.0%
! CAGGACTTGTTTATGACCTA+GGG + chr7_3:71069944-71069963 Msa1121080:CDS 40.0%
ACTCGTATAGTCACCAATGT+TGG + chr7_3:71070132-71070151 Msa1121080:CDS 40.0%
CTCGTATAGTCACCAATGTT+GGG + chr7_3:71070133-71070152 Msa1121080:CDS 40.0%
TTTGCAAAAGTCCAATTGCC+TGG + chr7_3:71070171-71070190 Msa1121080:CDS 40.0%
! CCAAATTGGTATTTTCCCCT+TGG - chr7_3:71070291-71070310 None:intergenic 40.0%
CCAAGGGGAAAATACCAATT+TGG + chr7_3:71070288-71070307 Msa1121080:CDS 40.0%
ACCAATTTGGAGAACTGCAA+TGG + chr7_3:71070301-71070320 Msa1121080:CDS 40.0%
TCCATTGCAGTTCTCCAAAT+TGG - chr7_3:71070305-71070324 None:intergenic 40.0%
! TACTTGGGAGCACATTCACA+TGG + chr7_3:71064801-71064820 Msa1121080:CDS 45.0%
TACTGGGTTCAATCTTGGGA+AGG + chr7_3:71064877-71064896 Msa1121080:CDS 45.0%
AACTGCACACTACACGTTCT+TGG + chr7_3:71065249-71065268 Msa1121080:CDS 45.0%
ACTGCACACTACACGTTCTT+GGG + chr7_3:71065250-71065269 Msa1121080:CDS 45.0%
AAACTGGCCAATCTGTTGGT+TGG + chr7_3:71065648-71065667 Msa1121080:intron 45.0%
CAGTAGAAAAACGAGGTAGG+GGG + chr7_3:71065928-71065947 Msa1121080:intron 45.0%
GATGACTGCAAAGACAGAAG+CGG + chr7_3:71065992-71066011 Msa1121080:intron 45.0%
AACCACGTGCTTTCTTTGAG+TGG + chr7_3:71066334-71066353 Msa1121080:intron 45.0%
GTTTGCATTAGGTGTTTGGC+CGG + chr7_3:71066658-71066677 Msa1121080:intron 45.0%
!! TCGAAGAGTTTTAGCGACAG+AGG + chr7_3:71066683-71066702 Msa1121080:CDS 45.0%
TAGGCCCAATTCCAGCAAAA+TGG + chr7_3:71066708-71066727 Msa1121080:CDS 45.0%
!! CACGCCATTTTGCTGGAATT+GGG - chr7_3:71066715-71066734 None:intergenic 45.0%
CAATTCCAGCAAAATGGCGT+GGG + chr7_3:71066714-71066733 Msa1121080:CDS 45.0%
AATTCCAGCAAAATGGCGTG+GGG + chr7_3:71066715-71066734 Msa1121080:CDS 45.0%
! TCTTGCTCCAATTAGCTTCC+TGG - chr7_3:71067104-71067123 None:intergenic 45.0%
CAAACAGCACGTGACTTTGT+AGG + chr7_3:71067175-71067194 Msa1121080:CDS 45.0%
!! TTGATAGTGTATGCGTACCG+TGG - chr7_3:71067201-71067220 None:intergenic 45.0%
GTACCAGGTGCAAGCATATT+TGG + chr7_3:71067238-71067257 Msa1121080:CDS 45.0%
GGCAATGGTACTGTAAAAGG+TGG + chr7_3:71067265-71067284 Msa1121080:CDS 45.0%
!! TAGGTTGCAACTCTAGCTCT+TGG - chr7_3:71067295-71067314 None:intergenic 45.0%
GTTGCATCTGCTGGAAATGA+TGG + chr7_3:71067508-71067527 Msa1121080:CDS 45.0%
TTAGTAACACTTCCAGGGGT+TGG - chr7_3:71067535-71067554 None:intergenic 45.0%
! AGAGTGAAAGACTGGTTAGG+TGG - chr7_3:71067777-71067796 None:intergenic 45.0%
! CGCATCTCGATTTGTCACAT+TGG - chr7_3:71067826-71067845 None:intergenic 45.0%
! TGCAGACGATTTTGTAGACC+AGG + chr7_3:71067963-71067982 Msa1121080:intron 45.0%
ACCCTGAGCAACTGAACTTA+TGG - chr7_3:71068327-71068346 None:intergenic 45.0%
AGCTAAATCGGCAAGAGCAA+AGG + chr7_3:71068352-71068371 Msa1121080:CDS 45.0%
GCTAAATCGGCAAGAGCAAA+GGG + chr7_3:71068353-71068372 Msa1121080:CDS 45.0%
AAGAAAGCCAGCTCCAGTTA+TGG + chr7_3:71068723-71068742 Msa1121080:CDS 45.0%
TATGAAGCCATAACTGGAGC+TGG - chr7_3:71068733-71068752 None:intergenic 45.0%
TTACCAACAGACAATCGTCG+AGG + chr7_3:71068988-71069007 Msa1121080:CDS 45.0%
AAACCTCGACGATTGTCTGT+TGG - chr7_3:71068994-71069013 None:intergenic 45.0%
TCATCTGAATTGGAGTCCTG+CGG + chr7_3:71069089-71069108 Msa1121080:CDS 45.0%
AGTGAGAGAGAAAATACCGG+TGG - chr7_3:71069136-71069155 None:intergenic 45.0%
TCTCTCTCACTCTACACACA+AGG + chr7_3:71069145-71069164 Msa1121080:intron 45.0%
ATTGTAGAGGTTACTTGGGC+AGG - chr7_3:71069713-71069732 None:intergenic 45.0%
TATCTCTTGTGGTTGCTGCA+AGG - chr7_3:71069828-71069847 None:intergenic 45.0%
CCTAGGTCATAAACAAGTCC+TGG - chr7_3:71069946-71069965 None:intergenic 45.0%
! CCAGGACTTGTTTATGACCT+AGG + chr7_3:71069943-71069962 Msa1121080:CDS 45.0%
AAGCAACAAGTGTGACTCCA+AGG + chr7_3:71070271-71070290 Msa1121080:CDS 45.0%
AGCAACAAGTGTGACTCCAA+GGG + chr7_3:71070272-71070291 Msa1121080:CDS 45.0%
GGAGAACTGCAATGGACAAA+TGG + chr7_3:71070309-71070328 Msa1121080:CDS 45.0%
!! AATAATAAAAATGATAAAAT+TGG - chr7_3:71066489-71066508 None:intergenic 5.0%
!!! TGAATAATTTTTTTTTTTTT+TGG - chr7_3:71068577-71068596 None:intergenic 5.0%
AGGTCAATAGAGGAAGGGGT+TGG - chr7_3:71064828-71064847 None:intergenic 50.0%
ACTCAGCTTGGCAAAAGGGA+AGG + chr7_3:71065303-71065322 Msa1121080:CDS 50.0%
GCTTGGCAAAAGGGAAGGTT+TGG + chr7_3:71065308-71065327 Msa1121080:CDS 50.0%
CGAGAAATATAGCGACTGCC+AGG + chr7_3:71065616-71065635 Msa1121080:intron 50.0%
! CCAACAGATTGGCCAGTTTC+CGG - chr7_3:71065647-71065666 None:intergenic 50.0%
GAAAAACGAGGTAGGGGGAA+TGG + chr7_3:71065933-71065952 Msa1121080:intron 50.0%
GTCATCATCATCGCTGCTTC+CGG - chr7_3:71065978-71065997 None:intergenic 50.0%
! GTCCACTCAAAGAAAGCACG+TGG - chr7_3:71066339-71066358 None:intergenic 50.0%
!! CCACGCCATTTTGCTGGAAT+TGG - chr7_3:71066716-71066735 None:intergenic 50.0%
CCAATTCCAGCAAAATGGCG+TGG + chr7_3:71066713-71066732 Msa1121080:CDS 50.0%
ATTCCAGCAAAATGGCGTGG+GGG + chr7_3:71066716-71066735 Msa1121080:CDS 50.0%
GCATGTGGAAACTTCGTACC+AGG + chr7_3:71067223-71067242 Msa1121080:CDS 50.0%
GCAGCAACTGTGAATACCCA+TGG - chr7_3:71067565-71067584 None:intergenic 50.0%
ATAGTGGCGTGTGTTCGAGA+AGG + chr7_3:71068017-71068036 Msa1121080:CDS 50.0%
TAGTGGCGTGTGTTCGAGAA+GGG + chr7_3:71068018-71068037 Msa1121080:CDS 50.0%
GCTGCAAGTATGTTCACACC+GGG - chr7_3:71068940-71068959 None:intergenic 50.0%
GGCTGCAAGTATGTTCACAC+CGG - chr7_3:71068941-71068960 None:intergenic 50.0%
ATGTCTTGCCCTCATGTTGC+TGG + chr7_3:71069042-71069061 Msa1121080:CDS 50.0%
TGTCTTGCCCTCATGTTGCT+GGG + chr7_3:71069043-71069062 Msa1121080:CDS 50.0%
! TGTACTTGGTGGCCCAACAT+TGG - chr7_3:71070148-71070167 None:intergenic 50.0%
GCAACAAGTGTGACTCCAAG+GGG + chr7_3:71070273-71070292 Msa1121080:CDS 50.0%
! TAGCGACTGCCAGGTTGAAC+CGG + chr7_3:71065625-71065644 Msa1121080:intron 55.0%
! TGCCAGGTTGAACCGGAAAC+TGG + chr7_3:71065632-71065651 Msa1121080:intron 55.0%
CCGGAAACTGGCCAATCTGT+TGG + chr7_3:71065644-71065663 Msa1121080:intron 55.0%
!! TTTCCCCCACGCCATTTTGC+TGG - chr7_3:71066722-71066741 None:intergenic 55.0%
!! CGTGCTGTTTGTTGCGAACG+AGG - chr7_3:71067166-71067185 None:intergenic 55.0%
GCACGTGACTTTGTAGGCCA+CGG + chr7_3:71067181-71067200 Msa1121080:CDS 55.0%
!! GGAAATGATGGACCAACCCC+TGG + chr7_3:71067520-71067539 Msa1121080:CDS 55.0%
AGTGGCGTGTGTTCGAGAAG+GGG + chr7_3:71068019-71068038 Msa1121080:CDS 55.0%
CAGCAGTCCCAGCAACATGA+GGG - chr7_3:71069053-71069072 None:intergenic 55.0%
CCTGGGTCCATTGCACTGTT+GGG - chr7_3:71069928-71069947 None:intergenic 55.0%
TCCTGGGTCCATTGCACTGT+TGG - chr7_3:71069929-71069948 None:intergenic 55.0%
GGCCAGTTTCCGGTTCAACC+TGG - chr7_3:71065637-71065656 None:intergenic 60.0%
AGGTAGGGGGAATGGCATCG+AGG + chr7_3:71065941-71065960 Msa1121080:intron 60.0%
! GGGGAATGGCATCGAGGAGA+TGG + chr7_3:71065947-71065966 Msa1121080:intron 60.0%
CCAGCAGTCCCAGCAACATG+AGG - chr7_3:71069054-71069073 None:intergenic 60.0%
CCTCATGTTGCTGGGACTGC+TGG + chr7_3:71069051-71069070 Msa1121080:CDS 60.0%
CCCAACAGTGCAATGGACCC+AGG + chr7_3:71069925-71069944 Msa1121080:CDS 60.0%
CATCGAGGAGATGGTCGCGC+CGG + chr7_3:71065956-71065975 Msa1121080:intron 65.0%
CAGCCTGATGTAACGGCGCC+CGG + chr7_3:71068919-71068938 Msa1121080:intron 65.0%
! ACACCGGGCGCCGTTACATC+AGG - chr7_3:71068925-71068944 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 71064530 71070374 71064530 ID=Msa1121080;Name=Msa1121080
chr7_3 mRNA 71064530 71070374 71064530 ID=Msa1121080-mRNA-1;Parent=Msa1121080;Name=Msa1121080-mRNA-1;_AED=0.31;_eAED=0.31;_QI=34|0.81|0.66|1|1|1|12|0|806
chr7_3 exon 71064530 71064653 71064530 ID=Msa1121080-mRNA-1:exon:18097;Parent=Msa1121080-mRNA-1
chr7_3 exon 71064789 71064898 71064789 ID=Msa1121080-mRNA-1:exon:18098;Parent=Msa1121080-mRNA-1
chr7_3 exon 71064996 71065093 71064996 ID=Msa1121080-mRNA-1:exon:18099;Parent=Msa1121080-mRNA-1
chr7_3 exon 71065207 71065362 71065207 ID=Msa1121080-mRNA-1:exon:18100;Parent=Msa1121080-mRNA-1
chr7_3 exon 71066669 71066792 71066669 ID=Msa1121080-mRNA-1:exon:18101;Parent=Msa1121080-mRNA-1
chr7_3 exon 71067105 71067642 71067105 ID=Msa1121080-mRNA-1:exon:18102;Parent=Msa1121080-mRNA-1
chr7_3 exon 71067750 71067844 71067750 ID=Msa1121080-mRNA-1:exon:18103;Parent=Msa1121080-mRNA-1
chr7_3 exon 71067968 71068080 71067968 ID=Msa1121080-mRNA-1:exon:18104;Parent=Msa1121080-mRNA-1
chr7_3 exon 71068297 71068504 71068297 ID=Msa1121080-mRNA-1:exon:18105;Parent=Msa1121080-mRNA-1
chr7_3 exon 71068666 71068795 71068666 ID=Msa1121080-mRNA-1:exon:18106;Parent=Msa1121080-mRNA-1
chr7_3 exon 71068922 71069138 71068922 ID=Msa1121080-mRNA-1:exon:18107;Parent=Msa1121080-mRNA-1
chr7_3 exon 71069833 71070374 71069833 ID=Msa1121080-mRNA-1:exon:18108;Parent=Msa1121080-mRNA-1
chr7_3 five_prime_UTR 71064530 71064563 71064530 ID=Msa1121080-mRNA-1:five_prime_utr;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71064564 71064653 71064564 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71064789 71064898 71064789 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71064996 71065093 71064996 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71065207 71065362 71065207 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71066669 71066792 71066669 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71067105 71067642 71067105 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71067750 71067844 71067750 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71067968 71068080 71067968 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71068297 71068504 71068297 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71068666 71068795 71068666 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71068922 71069138 71068922 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
chr7_3 CDS 71069833 71070374 71069833 ID=Msa1121080-mRNA-1:cds;Parent=Msa1121080-mRNA-1
Gene Sequence

>Msa1121080

ATGGGTTGCTCCATTTTATATCTTCATTTTCTTTTTTCATCTCTTCTAATTTTCACATTTTTGCTGGTTAATGTTCACGCTAGAAAAAAGTGTTACATTGTATACTTGGGAGCACATTCACATGGTCCAACCCCTTCCTCTATTGACCTTGAAACTGCTACATCTTCTCATTATGATTTACTGGGTTCAATCTTGGGAAGCAAAGAGAATGCAAAAGAAGCAATAATTTATTCATATAATAAACAGATCAATGGCTTTGCAGCTATACTTGAAGAAGAAGAAGCTGCACAAATTGCAAAAAATCCAAAGGTGGTATCTGTGTTCTTGAGCAAAGAGCATAAACTGCACACTACACGTTCTTGGGAATTTCTTGGACTAAGTACAAATGATATCAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAAAATACCATCATAGCTAACATCGATTCAGGTGTTTGGCCGGAATCGAAGAGTTTTAGCGACAGAGGAATAGGCCCAATTCCAGCAAAATGGCGTGGGGGAAACATCTGTCAAATTAACAAACTCAAAGGTTCAAAGAAACTTCCATGCAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATATGAACGTGATAACGGCAAACTTCCTCGTTCGCAACAAACAGCACGTGACTTTGTAGGCCACGGTACGCATACACTATCAACAGCATGTGGAAACTTCGTACCAGGTGCAAGCATATTTGGTATTGGCAATGGTACTGTAAAAGGTGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCTCAAAGTGCTATTTGCTATAGTGCTGATATATTAGCTGCTATTGAGCAAGCCATTAGTGATGGTGTTGATATAATCTCACTTTCTCTTGGAAGCAGTACTATTACAGATTCTCAAGGAATTTTGAAGGATATGATTTCAATAGGTGCATTTCATGCGCTTGCTAGAAATATTTTATTAGTTGCATCTGCTGGAAATGATGGACCAACCCCTGGAAGTGTTACTAATGTTGCTCCATGGGTATTCACAGTTGCTGCAAGTACAATTGATAGAGACTTCAGCAGTACTATGACCATTGGTAACAAAACTGTCACGGGAGCCAGTCTATTTGTAAACTTGCCACCTAACCAGTCTTTCACTCTAGTGGATTCTACGGATGTTAAATTTACCAATGTGACAAATCGAGATGCACGATTTTGTAGACCAGGAACACTTGATCCTTCTAAAGCAAGTGGAAAAATAGTGGCGTGTGTTCGAGAAGGGGAAATAACTTCGAACACTTTGACATCTGGAGTATTGTTTGGATATCAATATCCAAGAAAAGAATTTTCCATAAGTTCAGTTGCTCAGGGTCAAGAAGCTAAATCGGCAAGAGCAAAGGGAGTGATTTTGAGAAATCAACCAAGAATCAATGGGAGAATACTTCTCTCTGAGCCTCATGTTTTGTCTACTATCAACTATTATGACAAGCATCAATTAACAAGAGGACATAGTATAGGCATAAGTACCACTGATACAATAAAGTCAGTTACTAAAATAAGAATGTCACAAGCAAAAACACTCATTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAGTGAAATTCAGCCATCAATACTAAAGCCTGATGTAACGGCGCCCGGTGTGAACATACTTGCAGCCTATTCATTGTTTGCAAGTGCATCTAACTTACCAACAGACAATCGTCGAGGTTTCCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGGACTGCTGGATTAATCAAAACACTTCATCTGAATTGGAGTCCTGCGGCTATTAAATCAGCTATCATGACCACCGCAACCACAAGAGATAACACCAACAAGCCTATAAGTGATGCATTCGAAAACACAACTGCAAATCCATTTGCTTATGGTTCAGGACATATTCAACCCAACAGTGCAATGGACCCAGGACTTGTTTATGACCTAGGGATTAAGGATTACTTGAAATTCTTATGTGCTTCTGGATACAACCAACAACTCATTTCAGCACTTAATTTCAACATGACATTTACTTGTTCAGGAACTCATAACATAGATGACTTGAATTATCCTTCAATCACATTACCAAATATTGGTTTAAATGTTGTTAATGTCACTCGTATAGTCACCAATGTTGGGCCACCAAGTACATATTTTGCAAAAGTCCAATTGCCTGGATATAAAATTGCTGTTGTACCAAGTTCCTTGAATTTCAAGAAAATAGGTGAAAAGAAGAAATTTCAAGTTATTGTGCAAGCAACAAGTGTGACTCCAAGGGGAAAATACCAATTTGGAGAACTGCAATGGACAAATGGAAAGCATATTGTAAGGAGTCCCATTACTGTTCAACGCAAATGA

Protein sequence

>Msa1121080

MGCSILYLHFLFSSLLIFTFLLVNVHARKKCYIVYLGAHSHGPTPSSIDLETATSSHYDLLGSILGSKENAKEAIIYSYNKQINGFAAILEEEEAAQIAKNPKVVSVFLSKEHKLHTTRSWEFLGLSTNDINSAWQKGRFGENTIIANIDSGVWPESKSFSDRGIGPIPAKWRGGNICQINKLKGSKKLPCNRKLIGARFFNKAYERDNGKLPRSQQTARDFVGHGTHTLSTACGNFVPGASIFGIGNGTVKGGSPRARVATYKVCWSQSAICYSADILAAIEQAISDGVDIISLSLGSSTITDSQGILKDMISIGAFHALARNILLVASAGNDGPTPGSVTNVAPWVFTVAASTIDRDFSSTMTIGNKTVTGASLFVNLPPNQSFTLVDSTDVKFTNVTNRDARFCRPGTLDPSKASGKIVACVREGEITSNTLTSGVLFGYQYPRKEFSISSVAQGQEAKSARAKGVILRNQPRINGRILLSEPHVLSTINYYDKHQLTRGHSIGISTTDTIKSVTKIRMSQAKTLIGRKPAPVMASYSSRGPSEIQPSILKPDVTAPGVNILAAYSLFASASNLPTDNRRGFPFNVMQGTSMSCPHVAGTAGLIKTLHLNWSPAAIKSAIMTTATTRDNTNKPISDAFENTTANPFAYGSGHIQPNSAMDPGLVYDLGIKDYLKFLCASGYNQQLISALNFNMTFTCSGTHNIDDLNYPSITLPNIGLNVVNVTRIVTNVGPPSTYFAKVQLPGYKIAVVPSSLNFKKIGEKKKFQVIVQATSVTPRGKYQFGELQWTNGKHIVRSPITVQRK*