Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393650 | XP_013459201.1 | 89.151 | 212 | 11 | 1 | 1 | 200 | 1 | 212 | 8.93e-130 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393650 | sp|Q8VZU9|DERL1_ARATH | 58.454 | 207 | 74 | 1 | 1 | 195 | 1 | 207 | 5.85e-84 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393650 | A0A072V3Y3 | 89.151 | 212 | 11 | 1 | 1 | 200 | 1 | 212 | 4.26e-130 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0179860 | Msa0393650 | 0.806748 | 7.076202e-50 | -8.615850e-47 |
| Msa0212310 | Msa0393650 | 0.807453 | 5.018878e-50 | -8.615850e-47 |
| Msa0393650 | Msa0445040 | 0.872354 | 3.392790e-67 | -8.615850e-47 |
| Msa0393650 | Msa0488940 | 0.843248 | 1.575050e-58 | -8.615850e-47 |
| Msa0393650 | Msa0528970 | 0.807061 | 6.074233e-50 | -8.615850e-47 |
| Msa0393650 | Msa0533290 | 0.804690 | 1.914113e-49 | -8.615850e-47 |
| Msa0393650 | Msa0553460 | 0.804172 | 2.454314e-49 | -8.615850e-47 |
| Msa0393650 | Msa0618430 | 0.801353 | 9.373293e-49 | -8.615850e-47 |
| Msa0393650 | Msa0647830 | 0.802325 | 5.918551e-49 | -8.615850e-47 |
| Msa0393650 | Msa0696800 | 0.814301 | 1.651519e-51 | -8.615850e-47 |
| Msa0393650 | Msa0702870 | 0.800975 | 1.119646e-48 | -8.615850e-47 |
| Msa0393650 | Msa0818030 | 0.816600 | 5.087942e-52 | -8.615850e-47 |
| Msa0393650 | Msa1055430 | 0.815864 | 7.429591e-52 | -8.615850e-47 |
| Msa0393650 | Msa1058120 | 0.810550 | 1.090423e-50 | -8.615850e-47 |
| Msa0393650 | Msa1072490 | 0.807052 | 6.101351e-50 | -8.615850e-47 |
| Msa0393650 | Msa1107800 | 0.814737 | 1.323167e-51 | -8.615850e-47 |
| Msa0393650 | Msa1195750 | 0.803024 | 4.247020e-49 | -8.615850e-47 |
| Msa0393650 | Msa1197020 | 0.801662 | 8.100985e-49 | -8.615850e-47 |
| Msa0393650 | Msa1204450 | 0.801833 | 7.471540e-49 | -8.615850e-47 |
| Msa0393650 | Msa1249490 | 0.807462 | 4.996168e-50 | -8.615850e-47 |
| Msa0393650 | Msa1435420 | 0.800268 | 1.560892e-48 | -8.615850e-47 |
| Msa0245880 | Msa0393650 | 0.804813 | 1.804166e-49 | -8.615850e-47 |
| Msa0313920 | Msa0393650 | 0.802123 | 6.514298e-49 | -8.615850e-47 |
| Msa0347180 | Msa0393650 | 0.880255 | 6.383153e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393650 | MtrunA17_Chr3g0079071 | 89.151 | 212 | 11 | 1 | 1 | 200 | 1 | 212 | 8.21e-134 | 379 |
| Msa0393650 | MtrunA17_Chr8g0389711 | 57.328 | 232 | 87 | 1 | 1 | 220 | 1 | 232 | 1.22e-92 | 273 |
| Msa0393650 | MtrunA17_Chr2g0288201 | 31.579 | 209 | 122 | 2 | 6 | 193 | 7 | 215 | 1.05e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393650 | AT4G29330.2 | 58.373 | 209 | 75 | 1 | 1 | 197 | 1 | 209 | 2.30e-85 | 254 |
| Msa0393650 | AT4G29330.1 | 58.454 | 207 | 74 | 1 | 1 | 195 | 1 | 207 | 5.94e-85 | 255 |
| Msa0393650 | AT4G04860.1 | 30.732 | 205 | 121 | 2 | 6 | 189 | 7 | 211 | 3.20e-28 | 108 |
| Msa0393650 | AT4G21810.1 | 30.732 | 205 | 121 | 2 | 6 | 189 | 7 | 211 | 6.59e-27 | 105 |
Find 55 sgRNAs with CRISPR-Local
Find 565 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCAAGAATCAACATTTA+TGG | 0.126417 | 3_2:-7740835 | Msa0393650:CDS |
| CCTAGAATGTCTGGCTTTAA+AGG | 0.141829 | 3_2:+7739564 | None:intergenic |
| ATCACAAATTTCTTCTTTCT+TGG | 0.159647 | 3_2:-7741728 | Msa0393650:CDS |
| CGACCTTTATGACTTGTTAA+AGG | 0.187449 | 3_2:-7731497 | Msa0393650:CDS |
| CCTTTAAAGCCAGACATTCT+AGG | 0.260364 | 3_2:-7739564 | Msa0393650:CDS |
| TGGCTGCTGTGCCATATTTA+TGG | 0.282477 | 3_2:-7740921 | Msa0393650:CDS |
| TTTAATGTTTCAGATACTTC+TGG | 0.287318 | 3_2:-7742059 | Msa0393650:intron |
| CTTAGTGTTTAAACGACTTC+AGG | 0.309739 | 3_2:-7741932 | Msa0393650:intron |
| CCTCCAGTGAGCAAGACTTT+TGG | 0.313821 | 3_2:-7742030 | Msa0393650:CDS |
| CTAGCACTGGATTTGATATT+CGG | 0.313829 | 3_2:-7739591 | Msa0393650:CDS |
| TAAATGTTGATTCTTGCATT+TGG | 0.332736 | 3_2:+7740838 | None:intergenic |
| GTAGCTTGATTGTCTATGTT+TGG | 0.341104 | 3_2:-7731546 | Msa0393650:CDS |
| TGCAGAGAGCAAACGACTTC+AGG | 0.341994 | 3_2:-7731870 | Msa0393650:CDS |
| ACAGTGCTTCATCCTCTTGC+TGG | 0.343953 | 3_2:-7739510 | Msa0393650:CDS |
| ATCACAAATTTCTTCTTTCG+TGG | 0.350859 | 3_2:-7731612 | Msa0393650:CDS |
| AGCAAAATATGGTGTTTCAT+TGG | 0.351511 | 3_2:-7741287 | Msa0393650:CDS |
| ATGAATGGAGACCATAAATA+TGG | 0.359019 | 3_2:+7740910 | None:intergenic |
| AATCCAGTGAGCAAGACTTT+TGG | 0.359069 | 3_2:-7731941 | Msa0393650:CDS |
| AAGAATCAACATTTATGGTT+TGG | 0.373235 | 3_2:-7740830 | Msa0393650:CDS |
| ACTGCAAATTGAAATGAAAA+TGG | 0.377021 | 3_2:+7731588 | None:intergenic |
| ATATTTATGGTCTCCATTCA+TGG | 0.388255 | 3_2:-7740908 | Msa0393650:CDS |
| TAGACATTATTGAACGAAAT+AGG | 0.391186 | 3_2:+7742502 | None:intergenic |
| TAAAGGTCGATTCGTGCATC+TGG | 0.394970 | 3_2:+7731511 | None:intergenic |
| ACTGCAAATGGAAATGAAAA+TGG | 0.398146 | 3_2:+7741704 | None:intergenic |
| AAAATCAATCAATAGTTTGA+TGG | 0.401835 | 3_2:-7731419 | Msa0393650:three_prime_UTR |
| GACATTCTAGGGATGGTTGC+AGG | 0.419213 | 3_2:-7739552 | Msa0393650:CDS |
| TTATGGTTTGGTATCATTGA+AGG | 0.428421 | 3_2:-7740818 | Msa0393650:intron |
| GAATTGTACAGAGCAAAATA+TGG | 0.430905 | 3_2:-7741298 | Msa0393650:intron |
| TCTGCAGTTCTCTTGTCAAA+TGG | 0.435050 | 3_2:+7741256 | None:intergenic |
| GCAACCATCCCTAGAATGTC+TGG | 0.438466 | 3_2:+7739555 | None:intergenic |
| ACTAAAGAAATTCCCATGAA+TGG | 0.439121 | 3_2:+7740895 | None:intergenic |
| TATATCTATTGCAGGTTTGG+AGG | 0.439394 | 3_2:-7741754 | Msa0393650:intron |
| ATTATCAGACGAACTGCAAA+TGG | 0.441501 | 3_2:+7741692 | None:intergenic |
| TACATTTGTTGCAGGTTTGG+AGG | 0.445092 | 3_2:-7731638 | Msa0393650:intron |
| CTTTAAAGCCAGACATTCTA+GGG | 0.471915 | 3_2:-7739563 | Msa0393650:CDS |
| ACTCCAAAAGTCTTGCTCAC+TGG | 0.485579 | 3_2:+7731938 | None:intergenic |
| ACTCCAAAAGTCTTGCTCAC+TGG | 0.489230 | 3_2:+7742027 | None:intergenic |
| TATTTATGGTCTCCATTCAT+GGG | 0.507960 | 3_2:-7740907 | Msa0393650:CDS |
| TTCTTGCATTTGGAAATTCA+CGG | 0.511989 | 3_2:+7740848 | None:intergenic |
| TGAGAAAGAGATTACTCTGC+TGG | 0.513267 | 3_2:+7742477 | None:intergenic |
| TCCATGGGCTATGCTAGCAC+TGG | 0.517192 | 3_2:-7739604 | Msa0393650:CDS |
| AACACTATGAAGCACAAGAA+AGG | 0.518292 | 3_2:+7742548 | None:intergenic |
| TATGGTGTTTCATTGGAAAG+AGG | 0.521644 | 3_2:-7741280 | Msa0393650:CDS |
| ATACCTTTAACAAGTCATAA+AGG | 0.527510 | 3_2:+7731494 | None:intergenic |
| AAAGCCAGACATTCTAGGGA+TGG | 0.549511 | 3_2:-7739559 | Msa0393650:CDS |
| GTGCTTCATCCTCTTGCTGG+TGG | 0.558055 | 3_2:-7739507 | Msa0393650:CDS |
| ATTTGTTTCTCATATGAGAT+CGG | 0.560412 | 3_2:-7731364 | Msa0393650:three_prime_UTR |
| TTGAACTTTCCACCAGCAAG+AGG | 0.576756 | 3_2:+7739498 | None:intergenic |
| AGAAAAGGATACACTAAGAG+AGG | 0.581080 | 3_2:+7739465 | None:intergenic |
| TCCAGTGCTAGCATAGCCCA+TGG | 0.608359 | 3_2:+7739603 | None:intergenic |
| GTGCTAGCATAGCCCATGGA+AGG | 0.612546 | 3_2:+7739607 | None:intergenic |
| TTCGTGCATCTGGAAATTCA+CGG | 0.617311 | 3_2:+7731521 | None:intergenic |
| CCAAAAGTCTTGCTCACTGG+AGG | 0.629915 | 3_2:+7742030 | None:intergenic |
| ATTCATATAATATGCAGCTG+TGG | 0.634214 | 3_2:+7741990 | None:intergenic |
| ATTCAGATAATATGCAGCTG+TGG | 0.649892 | 3_2:+7731901 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAATTTATTAATTTT+CGG | + | chr3_2:7732054-7732073 | None:intergenic | 0.0% |
| !!! | TAATAAATTTTAAAAAATTA+TGG | - | chr3_2:7738360-7738379 | Msa0393650:intron | 0.0% |
| !!! | TAATTTTTTTATATAAAATT+AGG | - | chr3_2:7741044-7741063 | Msa0393650:intron | 0.0% |
| !!! | AATTTTTTTATATAAAATTA+GGG | - | chr3_2:7741045-7741064 | Msa0393650:intron | 0.0% |
| !!! | TTTTTAAATTTCAATGTTTA+AGG | + | chr3_2:7732025-7732044 | None:intergenic | 10.0% |
| !!! | TCTCAATTAATATTTTAATA+TGG | - | chr3_2:7733884-7733903 | Msa0393650:intron | 10.0% |
| !! | AACAATTAAATAAAATCAAA+GGG | + | chr3_2:7733974-7733993 | None:intergenic | 10.0% |
| !! | AAACAATTAAATAAAATCAA+AGG | + | chr3_2:7733975-7733994 | None:intergenic | 10.0% |
| !! | AAAATTAACATTCTTTAAAT+TGG | - | chr3_2:7735680-7735699 | Msa0393650:intron | 10.0% |
| !!! | GACTTTTTTTTTTTAAAAAA+AGG | + | chr3_2:7735720-7735739 | None:intergenic | 10.0% |
| !! | AATTCAAATTAATTTAATGA+AGG | + | chr3_2:7738073-7738092 | None:intergenic | 10.0% |
| !! | AAAAAAAAATTATACACTAA+GGG | + | chr3_2:7739079-7739098 | None:intergenic | 10.0% |
| !!! | AATCTAAAACATTTTTTTTA+AGG | - | chr3_2:7740327-7740346 | Msa0393650:intron | 10.0% |
| !!! | ATCTAAAACATTTTTTTTAA+GGG | - | chr3_2:7740328-7740347 | Msa0393650:intron | 10.0% |
| !!! | AAATTGTATCAATTTTTTTA+AGG | - | chr3_2:7740382-7740401 | Msa0393650:intron | 10.0% |
| !!! | AATTGTATCAATTTTTTTAA+GGG | - | chr3_2:7740383-7740402 | Msa0393650:intron | 10.0% |
| !! | GTTTATAAAGTAATAATTAA+GGG | + | chr3_2:7740496-7740515 | None:intergenic | 10.0% |
| !! | TGTTTATAAAGTAATAATTA+AGG | + | chr3_2:7740497-7740516 | None:intergenic | 10.0% |
| !!! | AGAAAAATATCTTTTAATAT+CGG | - | chr3_2:7741095-7741114 | Msa0393650:intron | 10.0% |
| !! | TTGCATATATGAAATATAAA+TGG | - | chr3_2:7731532-7731551 | Msa0393650:CDS | 15.0% |
| !!! | AATATAATTTTGGTGAAATT+TGG | + | chr3_2:7731603-7731622 | None:intergenic | 15.0% |
| !!! | GCATAATCAAAATATAATTT+TGG | + | chr3_2:7731613-7731632 | None:intergenic | 15.0% |
| !! | TATTAATTTATTATCCATGA+TGG | - | chr3_2:7731665-7731684 | Msa0393650:intron | 15.0% |
| !!! | TTTTTATTTATATCTATTGC+AGG | - | chr3_2:7732149-7732168 | Msa0393650:intron | 15.0% |
| !!! | TTAACTTTTTTTTTTTCAGT+TGG | - | chr3_2:7732891-7732910 | Msa0393650:intron | 15.0% |
| !! | AAATAAAAGGAACAAAAAAA+GGG | + | chr3_2:7732944-7732963 | None:intergenic | 15.0% |
| !! | TAAATAAAAGGAACAAAAAA+AGG | + | chr3_2:7732945-7732964 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr3_2:7733335-7733354 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr3_2:7733334-7733353 | Msa0393650:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr3_2:7733358-7733377 | Msa0393650:intron | 15.0% |
| !! | TGCTAAAAAAAACATAATAA+TGG | + | chr3_2:7734204-7734223 | None:intergenic | 15.0% |
| !! | AAATCATATTCATTTATGAT+TGG | + | chr3_2:7734247-7734266 | None:intergenic | 15.0% |
| !!! | TTAGCTTATATTTTTACAAT+AGG | - | chr3_2:7734835-7734854 | Msa0393650:intron | 15.0% |
| !!! | ACTAAATTATACTTTTAACT+CGG | + | chr3_2:7736549-7736568 | None:intergenic | 15.0% |
| !!! | CTTGAAATTTCTTATAATTT+TGG | + | chr3_2:7736642-7736661 | None:intergenic | 15.0% |
| !! | CAAAATTATAAGAAATTTCA+AGG | - | chr3_2:7736640-7736659 | Msa0393650:intron | 15.0% |
| !!! | AAGAAATATATGTTTTACAT+TGG | + | chr3_2:7737753-7737772 | None:intergenic | 15.0% |
| !!! | AAATATGTTGATGATAAATT+AGG | - | chr3_2:7738192-7738211 | Msa0393650:intron | 15.0% |
| !! | TAAACAAAATGATTTATGTT+TGG | - | chr3_2:7738727-7738746 | Msa0393650:intron | 15.0% |
| !! | TAATTACTAAAATAGACTAA+AGG | - | chr3_2:7738781-7738800 | Msa0393650:intron | 15.0% |
| !! | GAAAAAAAAATTATACACTA+AGG | + | chr3_2:7739080-7739099 | None:intergenic | 15.0% |
| !! | TATTGAAAGAAAAAAAAACA+AGG | - | chr3_2:7739363-7739382 | Msa0393650:intron | 15.0% |
| !!! | AAATATAAGGGTAATTTTAT+AGG | + | chr3_2:7739473-7739492 | None:intergenic | 15.0% |
| !! | TATAAGCAAACATTTATATT+CGG | - | chr3_2:7739614-7739633 | Msa0393650:CDS | 15.0% |
| !!! | GTATTTTTATTTTTGAATGT+TGG | - | chr3_2:7739660-7739679 | Msa0393650:intron | 15.0% |
| !! | TACTTTATAAACAAAATTCT+AGG | - | chr3_2:7740504-7740523 | Msa0393650:intron | 15.0% |
| !! | TTGAATTTATATTATGAATC+TGG | - | chr3_2:7740879-7740898 | Msa0393650:CDS | 15.0% |
| !!! | TAAGGTTTAAATTTTTTCAA+TGG | - | chr3_2:7740978-7740997 | Msa0393650:intron | 15.0% |
| !! | CATATATGCAATAAACTAAA+AGG | + | chr3_2:7731523-7731542 | None:intergenic | 20.0% |
| !! | AAAAAATATATGGTATAGCA+AGG | + | chr3_2:7731785-7731804 | None:intergenic | 20.0% |
| !!! | AATGTTTAAGGATAAGTTTT+TGG | + | chr3_2:7732013-7732032 | None:intergenic | 20.0% |
| !!! | ATTGTCATTTTGTAAATTTG+AGG | - | chr3_2:7732377-7732396 | Msa0393650:intron | 20.0% |
| !!! | TTGTCATTTTGTAAATTTGA+GGG | - | chr3_2:7732378-7732397 | Msa0393650:intron | 20.0% |
| !! | ATTAATAAGTAATTAGTGTC+CGG | - | chr3_2:7732794-7732813 | Msa0393650:intron | 20.0% |
| !! | GGATGAAACTAATAAATAAA+AGG | + | chr3_2:7732957-7732976 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr3_2:7733344-7733363 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr3_2:7733421-7733440 | Msa0393650:intron | 20.0% |
| !! | CATTTATATTCTCAAATTGT+TGG | + | chr3_2:7733561-7733580 | None:intergenic | 20.0% |
| !!! | TTGAGAAAATAAAAGTGTAT+TGG | - | chr3_2:7733614-7733633 | Msa0393650:intron | 20.0% |
| !!! | TTTTATCAACTCTTCAATTT+TGG | - | chr3_2:7733735-7733754 | Msa0393650:intron | 20.0% |
| !!! | TTTATCAACTCTTCAATTTT+GGG | - | chr3_2:7733736-7733755 | Msa0393650:intron | 20.0% |
| !! | TCTAATTGAGATATTCAAAT+GGG | + | chr3_2:7733854-7733873 | None:intergenic | 20.0% |
| !! | ATCTAATTGAGATATTCAAA+TGG | + | chr3_2:7733855-7733874 | None:intergenic | 20.0% |
| !!! | TATTTTAATATGGAAAATGC+TGG | - | chr3_2:7733894-7733913 | Msa0393650:intron | 20.0% |
| !! | AAATTCTTGATAAAAAGCTT+CGG | - | chr3_2:7734087-7734106 | Msa0393650:intron | 20.0% |
| !! | TTTATGCATTTGAATTAATG+TGG | - | chr3_2:7734135-7734154 | Msa0393650:intron | 20.0% |
| !!! | ATATCATGAATACTTTTTGT+TGG | - | chr3_2:7734176-7734195 | Msa0393650:intron | 20.0% |
| !!! | ATTAATACTTTTTGTTCTGT+AGG | - | chr3_2:7734274-7734293 | Msa0393650:intron | 20.0% |
| !!! | TTAATACTTTTTGTTCTGTA+GGG | - | chr3_2:7734275-7734294 | Msa0393650:intron | 20.0% |
| !! | AAGCTGATATATAATAGAAA+AGG | + | chr3_2:7734464-7734483 | None:intergenic | 20.0% |
| !!! | TGACATTTTGAAATGAAATA+TGG | + | chr3_2:7734548-7734567 | None:intergenic | 20.0% |
| !!! | TTTTTTAATCCTCTGATTTT+CGG | - | chr3_2:7734643-7734662 | Msa0393650:intron | 20.0% |
| !! | AGTTTAACTAATAATTGTTC+TGG | - | chr3_2:7734690-7734709 | Msa0393650:intron | 20.0% |
| !!! | TTTTATGTTAAATCAGTTAG+TGG | - | chr3_2:7735421-7735440 | Msa0393650:intron | 20.0% |
| !! | TTTATGTTAAATCAGTTAGT+GGG | - | chr3_2:7735422-7735441 | Msa0393650:intron | 20.0% |
| !! | TACATTGGAAATTAAATTCA+TGG | + | chr3_2:7735475-7735494 | None:intergenic | 20.0% |
| !! | AATTGTTAATCATATCATAG+TGG | + | chr3_2:7735514-7735533 | None:intergenic | 20.0% |
| !! | ACCACTCAATTTAAATTTAA+GGG | + | chr3_2:7735550-7735569 | None:intergenic | 20.0% |
| !! | AACCACTCAATTTAAATTTA+AGG | + | chr3_2:7735551-7735570 | None:intergenic | 20.0% |
| !!! | CACATTTTGACTAAAAAATA+TGG | - | chr3_2:7735606-7735625 | Msa0393650:intron | 20.0% |
| !!! | ATGTTAATTTTTACGTGTTT+TGG | + | chr3_2:7735671-7735690 | None:intergenic | 20.0% |
| !!! | TATCTTTGTCAAATGTTTTT+CGG | - | chr3_2:7736224-7736243 | Msa0393650:intron | 20.0% |
| !! | GAAATAGAAATAAATTGCAA+TGG | - | chr3_2:7736419-7736438 | Msa0393650:intron | 20.0% |
| !! | TATGAAAGTTAAGTACATTA+TGG | - | chr3_2:7736938-7736957 | Msa0393650:intron | 20.0% |
| !!! | TACTTAGTCTTACATTTTTT+TGG | + | chr3_2:7736968-7736987 | None:intergenic | 20.0% |
| !! | TTTGTTTGAACTCATTATAT+TGG | + | chr3_2:7737257-7737276 | None:intergenic | 20.0% |
| !! | ATATAATGAGTTCAAACAAA+AGG | - | chr3_2:7737257-7737276 | Msa0393650:intron | 20.0% |
| !! | TTATGAACTTTATATGATGT+TGG | + | chr3_2:7737291-7737310 | None:intergenic | 20.0% |
| !!! | CAACTATGTTTTGATTTTTT+AGG | - | chr3_2:7737345-7737364 | Msa0393650:intron | 20.0% |
| !!! | CTTGAAGATTTTTTATGTTA+CGG | - | chr3_2:7737770-7737789 | Msa0393650:intron | 20.0% |
| !! | CAAATTAATTTAATGAAGGA+AGG | + | chr3_2:7738069-7738088 | None:intergenic | 20.0% |
| !! | TAAAACTAGTATAACATGTT+TGG | - | chr3_2:7738169-7738188 | Msa0393650:intron | 20.0% |
| !! | AAATTAAGAATCACATCAAA+AGG | + | chr3_2:7738318-7738337 | None:intergenic | 20.0% |
| !! | TATGTAAATACTACTACAAT+AGG | - | chr3_2:7738505-7738524 | Msa0393650:intron | 20.0% |
| !! | ATGTAAATACTACTACAATA+GGG | - | chr3_2:7738506-7738525 | Msa0393650:intron | 20.0% |
| !!! | TGAAAATTGATTTTTGACAT+AGG | - | chr3_2:7738543-7738562 | Msa0393650:intron | 20.0% |
| !! | TAACGAATGATAATTGATAA+AGG | - | chr3_2:7738812-7738831 | Msa0393650:intron | 20.0% |
| !! | AACGAATGATAATTGATAAA+GGG | - | chr3_2:7738813-7738832 | Msa0393650:intron | 20.0% |
| !!! | ATTTATTTGTTTTTTCTACC+TGG | + | chr3_2:7739332-7739351 | None:intergenic | 20.0% |
| !!! | ATAGTTATATGTTCTAAAAG+CGG | - | chr3_2:7739408-7739427 | Msa0393650:intron | 20.0% |
| !! | ATTACCCTTATATTTAAACT+TGG | - | chr3_2:7739478-7739497 | Msa0393650:CDS | 20.0% |
| !! | CAAACCAAGTTTAAATATAA+GGG | + | chr3_2:7739485-7739504 | None:intergenic | 20.0% |
| !! | TCAAACCAAGTTTAAATATA+AGG | + | chr3_2:7739486-7739505 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGAGAGATGT+AGG | - | chr3_2:7739556-7739575 | Msa0393650:CDS | 20.0% |
| !! | AACTAAAATCTATCAATGAT+CGG | - | chr3_2:7739763-7739782 | Msa0393650:intron | 20.0% |
| !! | AAGAACGAAAGAAAATAAAT+TGG | + | chr3_2:7739859-7739878 | None:intergenic | 20.0% |
| !!! | AATATTCTTTTGAATGAGTT+TGG | - | chr3_2:7740536-7740555 | Msa0393650:intron | 20.0% |
| !!! | AAAAAATGCAAATGTCTTTT+TGG | - | chr3_2:7740758-7740777 | Msa0393650:intron | 20.0% |
| !!! | AAAAATGCAAATGTCTTTTT+GGG | - | chr3_2:7740759-7740778 | Msa0393650:intron | 20.0% |
| !!! | ATTAATTTGTGGAGAAAATA+AGG | - | chr3_2:7740960-7740979 | Msa0393650:intron | 20.0% |
| !! | GTAAGAAGTTGAAAAAAATT+AGG | + | chr3_2:7741393-7741412 | None:intergenic | 20.0% |
| !! | TGAAAGTAATGAGATATTTA+AGG | + | chr3_2:7741457-7741476 | None:intergenic | 20.0% |
| !! | ACTTTATAACAATTCTTTCA+GGG | + | chr3_2:7741950-7741969 | None:intergenic | 20.0% |
| !! | TACTTTATAACAATTCTTTC+AGG | + | chr3_2:7741951-7741970 | None:intergenic | 20.0% |
| !!! | AAACACCTTTTAAATATGAA+TGG | + | chr3_2:7742098-7742117 | None:intergenic | 20.0% |
| !! | GAAAATGAATTTACAGTATT+AGG | + | chr3_2:7742214-7742233 | None:intergenic | 20.0% |
| !! | AAAATCAATCAATAGTTTGA+TGG | - | chr3_2:7742492-7742511 | Msa0393650:exon | 20.0% |
| ! | TAGACATTATTGAACGAAAT+AGG | + | chr3_2:7731412-7731431 | None:intergenic | 25.0% |
| ! | TTTAATGTTTCAGATACTTC+TGG | - | chr3_2:7731852-7731871 | Msa0393650:intron | 25.0% |
| !! | TTTTCAGTATTAGTATGCAA+TGG | + | chr3_2:7732082-7732101 | None:intergenic | 25.0% |
| ! | ATTTATATCTATTGCAGGTT+TGG | - | chr3_2:7732154-7732173 | Msa0393650:intron | 25.0% |
| ! | ATCACAAATTTCTTCTTTCT+TGG | - | chr3_2:7732183-7732202 | Msa0393650:intron | 25.0% |
| ! | ATTATGTGATCACAATTTCA+GGG | - | chr3_2:7732349-7732368 | Msa0393650:intron | 25.0% |
| ! | GTTCAAAACTTACAATTTCA+AGG | - | chr3_2:7732408-7732427 | Msa0393650:intron | 25.0% |
| ! | TTTGTTTGGATGTTGATATT+TGG | - | chr3_2:7732679-7732698 | Msa0393650:intron | 25.0% |
| !! | TTTAATTTCAAGTAGTCTGA+TGG | - | chr3_2:7732758-7732777 | Msa0393650:intron | 25.0% |
| ! | TAGTCTGATGGTTAAAAATT+CGG | - | chr3_2:7732770-7732789 | Msa0393650:intron | 25.0% |
| ! | TTAATAAGTAATTAGTGTCC+GGG | - | chr3_2:7732795-7732814 | Msa0393650:intron | 25.0% |
| !! | TTTTCATGATTGTCTATGTT+TGG | - | chr3_2:7733038-7733057 | Msa0393650:intron | 25.0% |
| !!! | TAAATGTTGATTCTTGCATT+TGG | + | chr3_2:7733076-7733095 | None:intergenic | 25.0% |
| ! | AATGCAAGAATCAACATTTA+TGG | - | chr3_2:7733076-7733095 | Msa0393650:intron | 25.0% |
| ! | AAGAATCAACATTTATGGTT+TGG | - | chr3_2:7733081-7733100 | Msa0393650:intron | 25.0% |
| ! | ATTATCAAAAGAAGAGTCAT+TGG | + | chr3_2:7733131-7733150 | None:intergenic | 25.0% |
| ! | ATGAATGAGCAGATAAAATT+AGG | - | chr3_2:7733527-7733546 | Msa0393650:intron | 25.0% |
| ! | GCAAATGTGACAATTATTAT+AGG | - | chr3_2:7733675-7733694 | Msa0393650:intron | 25.0% |
| !! | TTATCAACTCTTCAATTTTG+GGG | - | chr3_2:7733737-7733756 | Msa0393650:intron | 25.0% |
| !! | ACTGCTACTTCAAAAAAATA+TGG | - | chr3_2:7734000-7734019 | Msa0393650:intron | 25.0% |
| !! | CTGCTACTTCAAAAAAATAT+GGG | - | chr3_2:7734001-7734020 | Msa0393650:intron | 25.0% |
| ! | AATTCTTGATAAAAAGCTTC+GGG | - | chr3_2:7734088-7734107 | Msa0393650:intron | 25.0% |
| !! | ATGATTGGTTAAAAGCATAA+TGG | + | chr3_2:7734232-7734251 | None:intergenic | 25.0% |
| ! | TATTATATATCAGCTTGCAA+TGG | - | chr3_2:7734468-7734487 | Msa0393650:intron | 25.0% |
| !! | TTTTTAATCCTCTGATTTTC+GGG | - | chr3_2:7734644-7734663 | Msa0393650:intron | 25.0% |
| !!! | TGACTAGTTTACTTAAGTTA+AGG | + | chr3_2:7734941-7734960 | None:intergenic | 25.0% |
| ! | TCCCTTAAATTTAAATTGAG+TGG | - | chr3_2:7735546-7735565 | Msa0393650:intron | 25.0% |
| ! | AATGTGATGTAAATGCAAAA+GGG | + | chr3_2:7735592-7735611 | None:intergenic | 25.0% |
| ! | AAATGTGATGTAAATGCAAA+AGG | + | chr3_2:7735593-7735612 | None:intergenic | 25.0% |
| ! | TTTGACTAAAAAATATGGTG+TGG | - | chr3_2:7735611-7735630 | Msa0393650:intron | 25.0% |
| !! | TTTTAACGAATACCTAGATT+GGG | + | chr3_2:7735782-7735801 | None:intergenic | 25.0% |
| !! | TTTTTAACGAATACCTAGAT+TGG | + | chr3_2:7735783-7735802 | None:intergenic | 25.0% |
| ! | TATTAACAAAGAGACTTAAC+TGG | - | chr3_2:7736283-7736302 | Msa0393650:intron | 25.0% |
| ! | AGTTGAGAGTAACTTAAATA+AGG | - | chr3_2:7736361-7736380 | Msa0393650:intron | 25.0% |
| ! | AGCTAGAAATTAAACTTAGA+GGG | - | chr3_2:7736521-7736540 | Msa0393650:intron | 25.0% |
| ! | TAAGAAATTTCAAGGATACA+AGG | - | chr3_2:7736648-7736667 | Msa0393650:intron | 25.0% |
| ! | AAGAAATTTCAAGGATACAA+GGG | - | chr3_2:7736649-7736668 | Msa0393650:intron | 25.0% |
| ! | TCTTGTAATTGTGATTTCAT+TGG | - | chr3_2:7736780-7736799 | Msa0393650:intron | 25.0% |
| ! | CAAACTCTTATTCTCTATTA+TGG | - | chr3_2:7736899-7736918 | Msa0393650:intron | 25.0% |
| ! | TAGGATTGTAGTTAAAGATT+AGG | - | chr3_2:7737138-7737157 | Msa0393650:intron | 25.0% |
| ! | AACAACAACAAAAAAAAGTG+AGG | + | chr3_2:7737188-7737207 | None:intergenic | 25.0% |
| ! | GACTCATTATCATTATATTG+TGG | - | chr3_2:7737367-7737386 | Msa0393650:intron | 25.0% |
| ! | ACATTTCAAACTATGTAACA+AGG | + | chr3_2:7737485-7737504 | None:intergenic | 25.0% |
| !! | AAGACAATATTTCCTTTTGT+GGG | + | chr3_2:7737850-7737869 | None:intergenic | 25.0% |
| ! | CTTCTTGCTTAATTTAAGTA+AGG | + | chr3_2:7737982-7738001 | None:intergenic | 25.0% |
| ! | ACTTAAATTAAGCAAGAAGA+AGG | - | chr3_2:7737983-7738002 | Msa0393650:intron | 25.0% |
| ! | TTTACTTGATTTACAGTGTT+TGG | - | chr3_2:7738112-7738131 | Msa0393650:intron | 25.0% |
| !!! | ATGGATTTTAAAATTGTGAG+TGG | - | chr3_2:7738379-7738398 | Msa0393650:intron | 25.0% |
| !!! | AAGTTTTGTCCTTTGTATAA+TGG | - | chr3_2:7738447-7738466 | Msa0393650:intron | 25.0% |
| !! | CTTTTGAATCCATTATACAA+AGG | + | chr3_2:7738459-7738478 | None:intergenic | 25.0% |
| ! | GTGACATATTCTAATTTAGT+TGG | - | chr3_2:7738591-7738610 | Msa0393650:intron | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | - | chr3_2:7738683-7738702 | Msa0393650:intron | 25.0% |
| !!! | TTTTTGGCTAGAATTACTTT+TGG | - | chr3_2:7738996-7739015 | Msa0393650:intron | 25.0% |
| !! | TATATTTTCGTTTTACTACC+AGG | - | chr3_2:7739311-7739330 | Msa0393650:intron | 25.0% |
| ! | TGGTTTGAATAATGACAAAT+TGG | - | chr3_2:7739498-7739517 | Msa0393650:CDS | 25.0% |
| !!! | TTTTGTCAAAAAGTATGTGT+AGG | - | chr3_2:7739523-7739542 | Msa0393650:CDS | 25.0% |
| ! | GAATGTTGGATAGAAATTTA+AGG | - | chr3_2:7739674-7739693 | Msa0393650:intron | 25.0% |
| ! | AATGATCGGTAAAATCATTA+TGG | - | chr3_2:7739777-7739796 | Msa0393650:intron | 25.0% |
| ! | ATAAGAGAAACAATATACGT+GGG | + | chr3_2:7739889-7739908 | None:intergenic | 25.0% |
| ! | AATAAGAGAAACAATATACG+TGG | + | chr3_2:7739890-7739909 | None:intergenic | 25.0% |
| ! | ACCTTGTCTCAATTTAAAAA+GGG | + | chr3_2:7739917-7739936 | None:intergenic | 25.0% |
| !! | GAAGTTTAATTTAACGTTGT+TGG | - | chr3_2:7740006-7740025 | Msa0393650:intron | 25.0% |
| ! | ACATCAAAGTATAGTACAAA+TGG | - | chr3_2:7740085-7740104 | Msa0393650:intron | 25.0% |
| ! | AGTTAAAAGAGATGGTAAAA+AGG | - | chr3_2:7740114-7740133 | Msa0393650:intron | 25.0% |
| !! | CGTTGGATTATGATTAATTT+TGG | + | chr3_2:7740466-7740485 | None:intergenic | 25.0% |
| ! | TGATACATCATGAAACATAT+GGG | + | chr3_2:7740684-7740703 | None:intergenic | 25.0% |
| ! | TTGATACATCATGAAACATA+TGG | + | chr3_2:7740685-7740704 | None:intergenic | 25.0% |
| !!! | TCTCTGGTTTTTAGTTTTAT+TGG | - | chr3_2:7740787-7740806 | Msa0393650:intron | 25.0% |
| !! | ACTAGAGAGTAATTAATTTG+TGG | - | chr3_2:7740949-7740968 | Msa0393650:intron | 25.0% |
| !!! | GGTTTAAATTTTTTCAATGG+AGG | - | chr3_2:7740981-7741000 | Msa0393650:intron | 25.0% |
| !!! | TTAATATCGGTGTTGTAAAT+AGG | - | chr3_2:7741108-7741127 | Msa0393650:intron | 25.0% |
| ! | AGAAGTTGAAAAAAATTAGG+TGG | + | chr3_2:7741390-7741409 | None:intergenic | 25.0% |
| ! | GAAAGAAGTTGAGAAAAATT+AGG | + | chr3_2:7741433-7741452 | None:intergenic | 25.0% |
| ! | ATATCAACATTAATTTCCAG+TGG | - | chr3_2:7741681-7741700 | Msa0393650:intron | 25.0% |
| ! | CATGAAAAATATCTCTTTCA+GGG | - | chr3_2:7741747-7741766 | Msa0393650:intron | 25.0% |
| !! | AATAATCATCGCTCATTTTA+GGG | + | chr3_2:7741853-7741872 | None:intergenic | 25.0% |
| !! | CTAAGGATCATAAAAGTTTT+AGG | + | chr3_2:7742075-7742094 | None:intergenic | 25.0% |
| !! | CTTTTAAATATGAATGGCTA+AGG | + | chr3_2:7742092-7742111 | None:intergenic | 25.0% |
| ! | CTTAGCCATTCATATTTAAA+AGG | - | chr3_2:7742090-7742109 | Msa0393650:intron | 25.0% |
| ! | GAATAACCACTTCTATTATT+GGG | - | chr3_2:7742158-7742177 | Msa0393650:intron | 25.0% |
| ! | TTATTTCCCAATAATAGAAG+TGG | + | chr3_2:7742167-7742186 | None:intergenic | 25.0% |
| ! | ACATGGTCAAAAGAATTAAA+TGG | + | chr3_2:7742248-7742267 | None:intergenic | 25.0% |
| !! | TTAATTCTTTTGACCATGTT+TGG | - | chr3_2:7742249-7742268 | Msa0393650:intron | 25.0% |
| ! | ACTGCAAATTGAAATGAAAA+TGG | + | chr3_2:7742326-7742345 | None:intergenic | 25.0% |
| ! | ATACCTTTAACAAGTCATAA+AGG | + | chr3_2:7742420-7742439 | None:intergenic | 25.0% |
| !!! | GGATGAGCATATTTTAATAA+AGG | - | chr3_2:7742513-7742532 | Msa0393650:five_prime_UTR | 25.0% |
| !! | ATTTGTTTCTCATATGAGAT+CGG | - | chr3_2:7742547-7742566 | Msa0393650:five_prime_UTR | 25.0% |
| ATATTGAGACATGCTTAGTA+TGG | - | chr3_2:7731695-7731714 | Msa0393650:intron | 30.0% | |
| ATTCATATAATATGCAGCTG+TGG | + | chr3_2:7731924-7731943 | None:intergenic | 30.0% | |
| GCATGATCAAGAAAACTAAA+CGG | + | chr3_2:7732125-7732144 | None:intergenic | 30.0% | |
| ACTGCAAATGGAAATGAAAA+TGG | + | chr3_2:7732210-7732229 | None:intergenic | 30.0% | |
| TGTGATCACATAATGTTACA+TGG | + | chr3_2:7732343-7732362 | None:intergenic | 30.0% | |
| CATTATGTGATCACAATTTC+AGG | - | chr3_2:7732348-7732367 | Msa0393650:intron | 30.0% | |
| GAATTGTACAGAGCAAAATA+TGG | - | chr3_2:7732613-7732632 | Msa0393650:intron | 30.0% | |
| AGCAAAATATGGTGTTTCAT+TGG | - | chr3_2:7732624-7732643 | Msa0393650:intron | 30.0% | |
| AGTCTGATGGTTAAAAATTC+GGG | - | chr3_2:7732771-7732790 | Msa0393650:intron | 30.0% | |
| ! | ATTAGTTTCATCCTTCTCTT+AGG | - | chr3_2:7732964-7732983 | Msa0393650:intron | 30.0% |
| ATGAATGGAGACCATAAATA+TGG | + | chr3_2:7733004-7733023 | None:intergenic | 30.0% | |
| ATATTTATGGTCTCCATTCA+TGG | - | chr3_2:7733003-7733022 | Msa0393650:intron | 30.0% | |
| TATTTATGGTCTCCATTCAT+GGG | - | chr3_2:7733004-7733023 | Msa0393650:intron | 30.0% | |
| ACTAAAGAAATTCCCATGAA+TGG | + | chr3_2:7733019-7733038 | None:intergenic | 30.0% | |
| TTCTTGCATTTGGAAATTCA+CGG | + | chr3_2:7733066-7733085 | None:intergenic | 30.0% | |
| !! | TTATGGTTTGGTATCATTGA+AGG | - | chr3_2:7733093-7733112 | Msa0393650:intron | 30.0% |
| GCTCATTCTCAAAACAAAAA+AGG | + | chr3_2:7733158-7733177 | None:intergenic | 30.0% | |
| CAAATAATTAAGGCTATGTG+AGG | + | chr3_2:7733188-7733207 | None:intergenic | 30.0% | |
| ! | CATAGCCTTAATTATTTGTC+TGG | - | chr3_2:7733190-7733209 | Msa0393650:intron | 30.0% |
| AGAAGCCAGACAAATAATTA+AGG | + | chr3_2:7733198-7733217 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr3_2:7733252-7733271 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr3_2:7733253-7733272 | Msa0393650:intron | 30.0% |
| ! | GTAGTGTGTAGAGTATTAAT+TGG | - | chr3_2:7733383-7733402 | Msa0393650:intron | 30.0% |
| ! | TGTGTAGAGTATTAATTGGA+GGG | - | chr3_2:7733387-7733406 | Msa0393650:intron | 30.0% |
| !!! | GACACTCATTTTAAAACTGA+GGG | - | chr3_2:7733491-7733510 | Msa0393650:intron | 30.0% |
| GACAATTATTATAGGACTCA+TGG | - | chr3_2:7733683-7733702 | Msa0393650:intron | 30.0% | |
| ! | TATCAACTCTTCAATTTTGG+GGG | - | chr3_2:7733738-7733757 | Msa0393650:intron | 30.0% |
| CAGTTAAGATTATTCCAACT+CGG | - | chr3_2:7733818-7733837 | Msa0393650:intron | 30.0% | |
| GAAATGAAATATGGTAAGTG+TGG | + | chr3_2:7734539-7734558 | None:intergenic | 30.0% | |
| AACTAATAATTGTTCTGGTC+AGG | - | chr3_2:7734695-7734714 | Msa0393650:intron | 30.0% | |
| ACTAATAATTGTTCTGGTCA+GGG | - | chr3_2:7734696-7734715 | Msa0393650:intron | 30.0% | |
| !! | TGCTTGAGTAACACTTTTTA+TGG | + | chr3_2:7734800-7734819 | None:intergenic | 30.0% |
| GTAAACTAGTCACAAAATAG+TGG | - | chr3_2:7734949-7734968 | Msa0393650:intron | 30.0% | |
| TCACAAAATAGTGGCATATT+GGG | - | chr3_2:7734958-7734977 | Msa0393650:intron | 30.0% | |
| TTGAATATAATTCCAGCTGA+TGG | + | chr3_2:7735022-7735041 | None:intergenic | 30.0% | |
| TCAGCTGGAATTATATTCAA+AGG | - | chr3_2:7735022-7735041 | Msa0393650:intron | 30.0% | |
| CGTAATAGATGTTTACGATT+TGG | - | chr3_2:7735206-7735225 | Msa0393650:intron | 30.0% | |
| GTAGTTGAACTATAATACGA+AGG | - | chr3_2:7735277-7735296 | Msa0393650:intron | 30.0% | |
| CAATGTCTTAAACACTAAAC+CGG | + | chr3_2:7735320-7735339 | None:intergenic | 30.0% | |
| ATGTAACACACTAACTGATT+TGG | + | chr3_2:7735391-7735410 | None:intergenic | 30.0% | |
| AATCAGTTAGTGTGTTACAT+TGG | - | chr3_2:7735391-7735410 | Msa0393650:intron | 30.0% | |
| GAAAAGGAGATAAAGTACAT+TGG | + | chr3_2:7735490-7735509 | None:intergenic | 30.0% | |
| ! | ATCATATCATAGTGGAGAAA+AGG | + | chr3_2:7735506-7735525 | None:intergenic | 30.0% |
| ATGTGATGTAAATGCAAAAG+GGG | + | chr3_2:7735591-7735610 | None:intergenic | 30.0% | |
| !! | CAAATTTGTTGTTTCTCCAA+TGG | + | chr3_2:7735945-7735964 | None:intergenic | 30.0% |
| ACAACAAATTTGCAGCAATT+AGG | - | chr3_2:7735953-7735972 | Msa0393650:intron | 30.0% | |
| TACTTATTAGATTCCACACT+TGG | + | chr3_2:7736032-7736051 | None:intergenic | 30.0% | |
| TATCGAGTAAACCATCAAAT+TGG | - | chr3_2:7736137-7736156 | Msa0393650:intron | 30.0% | |
| TTAAATAAGGACCAGTTTGA+TGG | - | chr3_2:7736374-7736393 | Msa0393650:intron | 30.0% | |
| GAGCTAGAAATTAAACTTAG+AGG | - | chr3_2:7736520-7736539 | Msa0393650:intron | 30.0% | |
| GCTAGAAATTAAACTTAGAG+GGG | - | chr3_2:7736522-7736541 | Msa0393650:intron | 30.0% | |
| CTAGAAATTAAACTTAGAGG+GGG | - | chr3_2:7736523-7736542 | Msa0393650:intron | 30.0% | |
| TTTGTTGAACTCTAGTTAGT+TGG | + | chr3_2:7736861-7736880 | None:intergenic | 30.0% | |
| ACAACGAAAAATGCAAATGT+AGG | - | chr3_2:7737002-7737021 | Msa0393650:intron | 30.0% | |
| TTCGATATGAAATTGCAATG+AGG | - | chr3_2:7737105-7737124 | Msa0393650:intron | 30.0% | |
| GCAATGAGGAATCATAAATT+AGG | - | chr3_2:7737119-7737138 | Msa0393650:intron | 30.0% | |
| !! | TCGTAACCATAGTTTGTTAA+AGG | - | chr3_2:7737230-7737249 | Msa0393650:intron | 30.0% |
| ATTGGACCTTTAACAAACTA+TGG | + | chr3_2:7737239-7737258 | None:intergenic | 30.0% | |
| TTATTCAAATCTTGCACTCA+TGG | - | chr3_2:7737651-7737670 | Msa0393650:intron | 30.0% | |
| TATTCAAATCTTGCACTCAT+GGG | - | chr3_2:7737652-7737671 | Msa0393650:intron | 30.0% | |
| ! | CAAGACAATATTTCCTTTTG+TGG | + | chr3_2:7737851-7737870 | None:intergenic | 30.0% |
| AATGCTTAAACAATGTCCTA+AGG | - | chr3_2:7737939-7737958 | Msa0393650:intron | 30.0% | |
| ATGCTTAAACAATGTCCTAA+GGG | - | chr3_2:7737940-7737959 | Msa0393650:intron | 30.0% | |
| TAAATTAAGCAAGAAGAAGG+AGG | - | chr3_2:7737986-7738005 | Msa0393650:intron | 30.0% | |
| TTATTCGAATCTTGCATTCA+TGG | - | chr3_2:7738020-7738039 | Msa0393650:intron | 30.0% | |
| TATTCGAATCTTGCATTCAT+GGG | - | chr3_2:7738021-7738040 | Msa0393650:intron | 30.0% | |
| ! | GCTTTCACTCTAATTTTGTT+AGG | - | chr3_2:7738277-7738296 | Msa0393650:intron | 30.0% |
| !!! | TGAACCAAACATGTTGTTTT+TGG | - | chr3_2:7738980-7738999 | Msa0393650:intron | 30.0% |
| !! | CACTGTAGAGAATTGATTTT+GGG | - | chr3_2:7739019-7739038 | Msa0393650:intron | 30.0% |
| !! | AAAGATACACAACCGATTTT+CGG | + | chr3_2:7739139-7739158 | None:intergenic | 30.0% |
| TAATTCCTCTAATTCTCGAT+GGG | - | chr3_2:7739704-7739723 | Msa0393650:intron | 30.0% | |
| ! | TTGGTAATCCAAACTTTGTT+AGG | - | chr3_2:7739736-7739755 | Msa0393650:intron | 30.0% |
| GAAGAGTAAAATCCTATCTA+TGG | - | chr3_2:7739799-7739818 | Msa0393650:intron | 30.0% | |
| AGTAAAATCCTATCTATGGT+CGG | - | chr3_2:7739803-7739822 | Msa0393650:intron | 30.0% | |
| ! | TCCCTTTTTAAATTGAGACA+AGG | - | chr3_2:7739913-7739932 | Msa0393650:intron | 30.0% |
| CACCTTGTCTCAATTTAAAA+AGG | + | chr3_2:7739918-7739937 | None:intergenic | 30.0% | |
| !!! | GAGGTTTAGGAAGATTTTTT+TGG | - | chr3_2:7739965-7739984 | Msa0393650:intron | 30.0% |
| !!! | GGAAGATTTTTTTGGAGAAA+AGG | - | chr3_2:7739973-7739992 | Msa0393650:intron | 30.0% |
| !!! | ATTTTTTTGGAGAAAAGGAG+AGG | - | chr3_2:7739978-7739997 | Msa0393650:intron | 30.0% |
| ATTTAACGTTGTTGGAAAAG+CGG | - | chr3_2:7740014-7740033 | Msa0393650:intron | 30.0% | |
| !!! | TGGGTATTTGCTTAGTTTTT+TGG | - | chr3_2:7740206-7740225 | Msa0393650:intron | 30.0% |
| GATACATCATGAAACATATG+GGG | + | chr3_2:7740683-7740702 | None:intergenic | 30.0% | |
| TTCATGTCATCCAAGATTAA+CGG | + | chr3_2:7740719-7740738 | None:intergenic | 30.0% | |
| GGAGCAAAAAAAAGATATAC+CGG | + | chr3_2:7741309-7741328 | None:intergenic | 30.0% | |
| ACATTAATTTCCAGTGGAAT+TGG | - | chr3_2:7741687-7741706 | Msa0393650:intron | 30.0% | |
| ! | CCTGAAAGAGATATTTTTCA+TGG | + | chr3_2:7741749-7741768 | None:intergenic | 30.0% |
| CCATGAAAAATATCTCTTTC+AGG | - | chr3_2:7741746-7741765 | Msa0393650:intron | 30.0% | |
| ! | CAATAATCATCGCTCATTTT+AGG | + | chr3_2:7741854-7741873 | None:intergenic | 30.0% |
| TGATGAAAAATCTTACTGCT+AGG | - | chr3_2:7741904-7741923 | Msa0393650:intron | 30.0% | |
| ! | CTTATTTGAGTTCTATCTCA+TGG | - | chr3_2:7742136-7742155 | Msa0393650:intron | 30.0% |
| GGAATAACCACTTCTATTAT+TGG | - | chr3_2:7742157-7742176 | Msa0393650:intron | 30.0% | |
| TTTACAGTATTAGGATGTAC+TGG | + | chr3_2:7742205-7742224 | None:intergenic | 30.0% | |
| ATCACAAATTTCTTCTTTCG+TGG | - | chr3_2:7742299-7742318 | Msa0393650:intron | 30.0% | |
| AACACTATGAAGCACAAGAA+AGG | + | chr3_2:7731366-7731385 | None:intergenic | 35.0% | |
| TCAATATCTCATAGCCATCA+TGG | + | chr3_2:7731682-7731701 | None:intergenic | 35.0% | |
| CTTAGTGTTTAAACGACTTC+AGG | - | chr3_2:7731979-7731998 | Msa0393650:intron | 35.0% | |
| TATATCTATTGCAGGTTTGG+AGG | - | chr3_2:7732157-7732176 | Msa0393650:intron | 35.0% | |
| ATTATCAGACGAACTGCAAA+TGG | + | chr3_2:7732222-7732241 | None:intergenic | 35.0% | |
| GGACTAAAGAGAATGTAACA+TGG | + | chr3_2:7732322-7732341 | None:intergenic | 35.0% | |
| TATGGTGTTTCATTGGAAAG+AGG | - | chr3_2:7732631-7732650 | Msa0393650:intron | 35.0% | |
| ! | AGAGAACTGCAGATTTTGTT+TGG | - | chr3_2:7732665-7732684 | Msa0393650:intron | 35.0% |
| ! | GTGTGTAGAGTATTAATTGG+AGG | - | chr3_2:7733386-7733405 | Msa0393650:intron | 35.0% |
| !!! | CGACACTCATTTTAAAACTG+AGG | - | chr3_2:7733490-7733509 | Msa0393650:intron | 35.0% |
| GTGAAATTTCCAGAATGTGT+TGG | - | chr3_2:7733937-7733956 | Msa0393650:intron | 35.0% | |
| TTTATCAAGAATTTGTCCCG+AGG | + | chr3_2:7734081-7734100 | None:intergenic | 35.0% | |
| ! | CTAGCACTGGATTTGATATT+CGG | - | chr3_2:7734320-7734339 | Msa0393650:intron | 35.0% |
| !! | CTTTAAAGCCAGACATTCTA+GGG | - | chr3_2:7734348-7734367 | Msa0393650:intron | 35.0% |
| AGAAAAGGATACACTAAGAG+AGG | + | chr3_2:7734449-7734468 | None:intergenic | 35.0% | |
| GCAACTTGATAGAATCATTG+TGG | + | chr3_2:7734499-7734518 | None:intergenic | 35.0% | |
| ACTTTGAGTGATACTCTTCA+TGG | + | chr3_2:7734602-7734621 | None:intergenic | 35.0% | |
| GTCACAAAATAGTGGCATAT+TGG | - | chr3_2:7734957-7734976 | Msa0393650:intron | 35.0% | |
| CACAAAATAGTGGCATATTG+GGG | - | chr3_2:7734959-7734978 | Msa0393650:intron | 35.0% | |
| ! | TTGCACTGGAGCATTTATTT+GGG | + | chr3_2:7734993-7735012 | None:intergenic | 35.0% |
| ! | ATTGCACTGGAGCATTTATT+TGG | + | chr3_2:7734994-7735013 | None:intergenic | 35.0% |
| ! | TTGTTTGATTTCCACCAAGA+CGG | + | chr3_2:7735057-7735076 | None:intergenic | 35.0% |
| GGAAGAGCTTATCGTTTAAA+TGG | - | chr3_2:7735163-7735182 | Msa0393650:intron | 35.0% | |
| CTACTTTAAACCGTCTGAAA+CGG | + | chr3_2:7735261-7735280 | None:intergenic | 35.0% | |
| ACTATAATACGAAGGTCTCA+TGG | - | chr3_2:7735285-7735304 | Msa0393650:intron | 35.0% | |
| CTATAATACGAAGGTCTCAT+GGG | - | chr3_2:7735286-7735305 | Msa0393650:intron | 35.0% | |
| ! | CGGTTTAGTGTTTAAGACAT+TGG | - | chr3_2:7735318-7735337 | Msa0393650:intron | 35.0% |
| !!! | TACGTGTTTTGGTAAACACA+TGG | + | chr3_2:7735660-7735679 | None:intergenic | 35.0% |
| AAGAAGCAATGTTTGATGTG+AGG | + | chr3_2:7735877-7735896 | None:intergenic | 35.0% | |
| CACACTATTGTAAACACCAT+TGG | - | chr3_2:7735926-7735945 | Msa0393650:intron | 35.0% | |
| AGACACATGAACCAATTTGA+TGG | + | chr3_2:7736151-7736170 | None:intergenic | 35.0% | |
| TGTTCAGTAAACCATCAAAC+TGG | + | chr3_2:7736388-7736407 | None:intergenic | 35.0% | |
| ACATCACAGTTGTAGGAAAA+AGG | - | chr3_2:7736448-7736467 | Msa0393650:intron | 35.0% | |
| !! | TTAATTTCTAGCTCCGTTCT+GGG | + | chr3_2:7736514-7736533 | None:intergenic | 35.0% |
| !! | TTTAATTTCTAGCTCCGTTC+TGG | + | chr3_2:7736515-7736534 | None:intergenic | 35.0% |
| ACGAAAAATGCAAATGTAGG+AGG | - | chr3_2:7737005-7737024 | Msa0393650:intron | 35.0% | |
| TTGTTTAAGGAACCCACAAA+AGG | - | chr3_2:7737835-7737854 | Msa0393650:intron | 35.0% | |
| CGATGCAGATATTAATGCAT+CGG | + | chr3_2:7738141-7738160 | None:intergenic | 35.0% | |
| !! | ATGTTTTTGATGTGATCTCG+AGG | - | chr3_2:7738232-7738251 | Msa0393650:intron | 35.0% |
| AGTTGGTTGTGTTTCTTCTT+TGG | - | chr3_2:7738255-7738274 | Msa0393650:intron | 35.0% | |
| AGAATCACATCAAAAGGTTG+CGG | + | chr3_2:7738312-7738331 | None:intergenic | 35.0% | |
| TACAAACCTATACACGTTCA+AGG | - | chr3_2:7738872-7738891 | Msa0393650:intron | 35.0% | |
| AATTCTCCTTGAACGTGTAT+AGG | + | chr3_2:7738881-7738900 | None:intergenic | 35.0% | |
| ! | TTCTAGAAAAGCTAGAAGCT+AGG | - | chr3_2:7738903-7738922 | Msa0393650:intron | 35.0% |
| CTAGCCAAAAACAACATGTT+TGG | + | chr3_2:7738987-7739006 | None:intergenic | 35.0% | |
| !! | GCACTGTAGAGAATTGATTT+TGG | - | chr3_2:7739018-7739037 | Msa0393650:intron | 35.0% |
| TAGTGACACAAACCGAAAAT+CGG | - | chr3_2:7739124-7739143 | Msa0393650:intron | 35.0% | |
| CATCGAGAATTAGAGGAATT+AGG | + | chr3_2:7739705-7739724 | None:intergenic | 35.0% | |
| CTAATTCCTCTAATTCTCGA+TGG | - | chr3_2:7739703-7739722 | Msa0393650:intron | 35.0% | |
| AGTTAGCTCCTAACAAAGTT+TGG | + | chr3_2:7739747-7739766 | None:intergenic | 35.0% | |
| TTTAACGTTGTTGGAAAAGC+GGG | - | chr3_2:7740015-7740034 | Msa0393650:intron | 35.0% | |
| !! | TAATTAAGGGTGTTTGTCGT+TGG | + | chr3_2:7740483-7740502 | None:intergenic | 35.0% |
| TGTTCGTAGGCAAGAAAATA+AGG | - | chr3_2:7740619-7740638 | Msa0393650:intron | 35.0% | |
| TCATGTCATCCAAGATTAAC+GGG | + | chr3_2:7740718-7740737 | None:intergenic | 35.0% | |
| ATTGTATGTGAATGCACAAG+TGG | - | chr3_2:7741250-7741269 | Msa0393650:intron | 35.0% | |
| GCAAAAAAAAGATATACCGG+CGG | + | chr3_2:7741306-7741325 | None:intergenic | 35.0% | |
| GAGAGTTGTGTATAATGCAA+AGG | + | chr3_2:7741485-7741504 | None:intergenic | 35.0% | |
| GAAGAGGAAAATTGGTACAA+GGG | + | chr3_2:7741539-7741558 | None:intergenic | 35.0% | |
| ATTGATGGGAAGAGGAAAAT+TGG | + | chr3_2:7741547-7741566 | None:intergenic | 35.0% | |
| CATCATGGGAAGAAATTGAT+GGG | + | chr3_2:7741561-7741580 | None:intergenic | 35.0% | |
| ! | TTTCTTCCCATGATGGAATT+TGG | - | chr3_2:7741566-7741585 | Msa0393650:intron | 35.0% |
| TTGGAACCAAATTCCATCAT+GGG | + | chr3_2:7741575-7741594 | None:intergenic | 35.0% | |
| !! | ATCATGATTCTAGCTTGACA+AGG | - | chr3_2:7741812-7741831 | Msa0393650:intron | 35.0% |
| !! | TCATGATTCTAGCTTGACAA+GGG | - | chr3_2:7741813-7741832 | Msa0393650:intron | 35.0% |
| AACAATTCTTTCAGGGCTTA+AGG | + | chr3_2:7741943-7741962 | None:intergenic | 35.0% | |
| ATTCAGATAATATGCAGCTG+TGG | + | chr3_2:7742013-7742032 | None:intergenic | 35.0% | |
| GCAACAAATGTAACCAAACA+TGG | + | chr3_2:7742265-7742284 | None:intergenic | 35.0% | |
| ! | TGTTTGGTTACATTTGTTGC+AGG | - | chr3_2:7742265-7742284 | Msa0393650:intron | 35.0% |
| GTAGCTTGATTGTCTATGTT+TGG | - | chr3_2:7742365-7742384 | Msa0393650:intron | 35.0% | |
| !! | CGACCTTTATGACTTGTTAA+AGG | - | chr3_2:7742414-7742433 | Msa0393650:intron | 35.0% |
| TGAGAAAGAGATTACTCTGC+TGG | + | chr3_2:7731437-7731456 | None:intergenic | 40.0% | |
| !! | GAGAGCATAGCACTGTTTTA+TGG | - | chr3_2:7731956-7731975 | Msa0393650:intron | 40.0% |
| TCTGCAGTTCTCTTGTCAAA+TGG | + | chr3_2:7732658-7732677 | None:intergenic | 40.0% | |
| !!! | ATTTGGTGCACTCTCACTTT+TGG | - | chr3_2:7732696-7732715 | Msa0393650:intron | 40.0% |
| CATAACATATACATGAGCCG+AGG | + | chr3_2:7732828-7732847 | None:intergenic | 40.0% | |
| ACCAATTGAGTTAAGCTCAC+AGG | - | chr3_2:7732858-7732877 | Msa0393650:intron | 40.0% | |
| CCAATTGAGTTAAGCTCACA+GGG | - | chr3_2:7732859-7732878 | Msa0393650:intron | 40.0% | |
| TTCATCCTTCTCTTAGGTGA+TGG | - | chr3_2:7732970-7732989 | Msa0393650:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3_2:7733248-7733267 | None:intergenic | 40.0% |
| !! | CTCTTCAATTTTGGGGGAAA+TGG | - | chr3_2:7733744-7733763 | Msa0393650:intron | 40.0% |
| !! | ATTTTGGGGGAAATGGACAT+TGG | - | chr3_2:7733751-7733770 | Msa0393650:intron | 40.0% |
| ! | CACATTCTGGAAATTTCACG+AGG | + | chr3_2:7733936-7733955 | None:intergenic | 40.0% |
| AGAATGTTGCCAACACATTC+TGG | + | chr3_2:7733949-7733968 | None:intergenic | 40.0% | |
| ! | TGTAGGGTTTTTACCTTCCA+TGG | - | chr3_2:7734291-7734310 | Msa0393650:intron | 40.0% |
| ! | GTAGGGTTTTTACCTTCCAT+GGG | - | chr3_2:7734292-7734311 | Msa0393650:intron | 40.0% |
| !! | CCTAGAATGTCTGGCTTTAA+AGG | + | chr3_2:7734350-7734369 | None:intergenic | 40.0% |
| !! | CCTTTAAAGCCAGACATTCT+AGG | - | chr3_2:7734347-7734366 | Msa0393650:intron | 40.0% |
| AGCAACAAGAAACACTTCAC+AGG | - | chr3_2:7735078-7735097 | Msa0393650:intron | 40.0% | |
| AACACTTCACAGGAAACAAG+TGG | - | chr3_2:7735088-7735107 | Msa0393650:intron | 40.0% | |
| CAGTTTCTTTCCGTTTCAGA+CGG | - | chr3_2:7735248-7735267 | Msa0393650:intron | 40.0% | |
| TAGATCACTTGAAAGTCTCG+AGG | - | chr3_2:7735744-7735763 | Msa0393650:intron | 40.0% | |
| !! | GAATACCTAGATTGGGTTGA+TGG | + | chr3_2:7735775-7735794 | None:intergenic | 40.0% |
| ATGTTTGATGTGAGGATGGA+AGG | + | chr3_2:7735869-7735888 | None:intergenic | 40.0% | |
| AGCAATGTTTGATGTGAGGA+TGG | + | chr3_2:7735873-7735892 | None:intergenic | 40.0% | |
| ! | CAGCAATTAGGCTAGTTCTT+GGG | - | chr3_2:7735965-7735984 | Msa0393650:intron | 40.0% |
| ! | TAGATTCCACACTTGGTTTG+TGG | + | chr3_2:7736025-7736044 | None:intergenic | 40.0% |
| GATGCATACATCACAGTTGT+AGG | - | chr3_2:7736441-7736460 | Msa0393650:intron | 40.0% | |
| CAAGTGTTTCTTGCTTCAGA+AGG | - | chr3_2:7736681-7736700 | Msa0393650:intron | 40.0% | |
| TCTTGCTAACAAGTGTCCTA+AGG | - | chr3_2:7737809-7737828 | Msa0393650:intron | 40.0% | |
| CTTGCTAACAAGTGTCCTAA+GGG | - | chr3_2:7737810-7737829 | Msa0393650:intron | 40.0% | |
| !! | TGTCCTAAGGGCATTGTTTA+AGG | - | chr3_2:7737822-7737841 | Msa0393650:intron | 40.0% |
| GTTCCTTAAACAATGCCCTT+AGG | + | chr3_2:7737828-7737847 | None:intergenic | 40.0% | |
| AAATGCTAACAAGTGCCCTT+AGG | + | chr3_2:7737958-7737977 | None:intergenic | 40.0% | |
| CATTAATATCTGCATCGCAC+AGG | - | chr3_2:7738144-7738163 | Msa0393650:intron | 40.0% | |
| TGGCTAAGTTGTGAATCACA+TGG | - | chr3_2:7738399-7738418 | Msa0393650:intron | 40.0% | |
| AGCTAGGATTTGTAGCTTCA+TGG | - | chr3_2:7738919-7738938 | Msa0393650:intron | 40.0% | |
| ! | GCTTCATGGAGAATTGCTTT+TGG | - | chr3_2:7738933-7738952 | Msa0393650:intron | 40.0% |
| !! | TCATGGAGAATTGCTTTTGG+AGG | - | chr3_2:7738936-7738955 | Msa0393650:intron | 40.0% |
| TTATACACTAAGGGCCTGTT+TGG | + | chr3_2:7739070-7739089 | None:intergenic | 40.0% | |
| ! | TCCTTTTGTGATAGCAACCA+TGG | - | chr3_2:7739098-7739117 | Msa0393650:intron | 40.0% |
| ACCATGGTTGCTATCACAAA+AGG | + | chr3_2:7739102-7739121 | None:intergenic | 40.0% | |
| ! | TTTTGTGATAGCAACCATGG+TGG | - | chr3_2:7739101-7739120 | Msa0393650:intron | 40.0% |
| TCTTTCCCATCGAGAATTAG+AGG | + | chr3_2:7739712-7739731 | None:intergenic | 40.0% | |
| ! | TCTCGATGGGAAAGAGATTT+TGG | - | chr3_2:7739717-7739736 | Msa0393650:intron | 40.0% |
| AGACAAGGTGTGTTCGATTA+AGG | - | chr3_2:7739928-7739947 | Msa0393650:intron | 40.0% | |
| TGTGTTCGATTAAGGAGTCA+GGG | - | chr3_2:7739936-7739955 | Msa0393650:intron | 40.0% | |
| TTGGAGAAAAGGAGAGGTTT+AGG | - | chr3_2:7739984-7740003 | Msa0393650:intron | 40.0% | |
| TTAACGTTGTTGGAAAAGCG+GGG | - | chr3_2:7740016-7740035 | Msa0393650:intron | 40.0% | |
| TTCGAGACTAATTGTGGATC+AGG | - | chr3_2:7740039-7740058 | Msa0393650:intron | 40.0% | |
| TCGAGACTAATTGTGGATCA+GGG | - | chr3_2:7740040-7740059 | Msa0393650:intron | 40.0% | |
| GGAAGTCGAGTTAAAAGAGA+TGG | - | chr3_2:7740106-7740125 | Msa0393650:intron | 40.0% | |
| !! | GAGAAGGTTGTTTTGTGGAA+AGG | - | chr3_2:7740182-7740201 | Msa0393650:intron | 40.0% |
| !! | AGGTTGTTTTGTGGAAAGGA+TGG | - | chr3_2:7740186-7740205 | Msa0393650:intron | 40.0% |
| !! | GGTTGTTTTGTGGAAAGGAT+GGG | - | chr3_2:7740187-7740206 | Msa0393650:intron | 40.0% |
| TTGTAGTGTCGTATGTTCGT+AGG | - | chr3_2:7740606-7740625 | Msa0393650:intron | 40.0% | |
| CATGAAACATATGGGGACTA+GGG | + | chr3_2:7740676-7740695 | None:intergenic | 40.0% | |
| TCATGAAACATATGGGGACT+AGG | + | chr3_2:7740677-7740696 | None:intergenic | 40.0% | |
| TCCTTTGTACCCGTTAATCT+TGG | - | chr3_2:7740706-7740725 | Msa0393650:intron | 40.0% | |
| ! | TCCAAGATTAACGGGTACAA+AGG | + | chr3_2:7740710-7740729 | None:intergenic | 40.0% |
| !! | ATGCAAATGTCTTTTTGGGC+TGG | - | chr3_2:7740763-7740782 | Msa0393650:intron | 40.0% |
| ! | GGAGGTCTCTAAAAAAACTG+AGG | - | chr3_2:7740999-7741018 | Msa0393650:intron | 40.0% |
| ! | AGGTGAGGTTTTTGTATGTG+CGG | - | chr3_2:7741204-7741223 | Msa0393650:intron | 40.0% |
| AATTGTGACATGTGTCCATG+TGG | + | chr3_2:7741233-7741252 | None:intergenic | 40.0% | |
| !!! | TTTTTTTGCTCCATTACCCG+AGG | - | chr3_2:7741317-7741336 | Msa0393650:intron | 40.0% |
| !!! | TTTTTTGCTCCATTACCCGA+GGG | - | chr3_2:7741318-7741337 | Msa0393650:intron | 40.0% |
| AAGGATAAAAGACCAACCCT+CGG | + | chr3_2:7741337-7741356 | None:intergenic | 40.0% | |
| AGGAAAATTGGTACAAGGGT+GGG | + | chr3_2:7741535-7741554 | None:intergenic | 40.0% | |
| GGAAGAGGAAAATTGGTACA+AGG | + | chr3_2:7741540-7741559 | None:intergenic | 40.0% | |
| CCATCATGGGAAGAAATTGA+TGG | + | chr3_2:7741562-7741581 | None:intergenic | 40.0% | |
| CCATCAATTTCTTCCCATGA+TGG | - | chr3_2:7741559-7741578 | Msa0393650:intron | 40.0% | |
| GTTGGAACCAAATTCCATCA+TGG | + | chr3_2:7741576-7741595 | None:intergenic | 40.0% | |
| ! | ATGGAATTTGGTTCCAACCT+TGG | - | chr3_2:7741578-7741597 | Msa0393650:intron | 40.0% |
| AATACAGACACCAATTCCAC+TGG | + | chr3_2:7741700-7741719 | None:intergenic | 40.0% | |
| TCTCTTTCAGGGCTTAAAGT+TGG | - | chr3_2:7741758-7741777 | Msa0393650:intron | 40.0% | |
| GGTATTATTCTACCTAGCAG+TGG | - | chr3_2:7741779-7741798 | Msa0393650:intron | 40.0% | |
| !! | CATGATTCTAGCTTGACAAG+GGG | - | chr3_2:7741814-7741833 | Msa0393650:intron | 40.0% |
| !! | TCATCGCTCATTTTAGGGAT+CGG | + | chr3_2:7741848-7741867 | None:intergenic | 40.0% |
| ! | AATCCAGTGAGCAAGACTTT+TGG | - | chr3_2:7741970-7741989 | Msa0393650:CDS | 40.0% |
| ! | GGTTACATTTGTTGCAGGTT+TGG | - | chr3_2:7742270-7742289 | Msa0393650:intron | 40.0% |
| ! | TACATTTGTTGCAGGTTTGG+AGG | - | chr3_2:7742273-7742292 | Msa0393650:intron | 40.0% |
| TTCGTGCATCTGGAAATTCA+CGG | + | chr3_2:7742393-7742412 | None:intergenic | 40.0% | |
| ACTCCAAAAGTCTTGCTCAC+TGG | + | chr3_2:7731887-7731906 | None:intergenic | 45.0% | |
| !! | AGTGAGCAAGACTTTTGGAG+TGG | - | chr3_2:7731886-7731905 | Msa0393650:CDS | 45.0% |
| CCCTGTGAGCTTAACTCAAT+TGG | + | chr3_2:7732862-7732881 | None:intergenic | 45.0% | |
| TGGCTGCTGTGCCATATTTA+TGG | - | chr3_2:7732990-7733009 | Msa0393650:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3_2:7733249-7733268 | None:intergenic | 45.0% |
| TGGGTCAAGATTATCCGAGT+TGG | + | chr3_2:7733835-7733854 | None:intergenic | 45.0% | |
| !!! | AACCACGATGCCGTTTTTTC+CGG | - | chr3_2:7734024-7734043 | Msa0393650:intron | 45.0% |
| AATCACAATTCATGCTGGCC+CGG | + | chr3_2:7734046-7734065 | None:intergenic | 45.0% | |
| GGACCAATCACAATTCATGC+TGG | + | chr3_2:7734051-7734070 | None:intergenic | 45.0% | |
| ! | TGATTGGTCCAACAAAGCCT+CGG | - | chr3_2:7734061-7734080 | Msa0393650:intron | 45.0% |
| ! | AATTTGTCCCGAGGCTTTGT+TGG | + | chr3_2:7734072-7734091 | None:intergenic | 45.0% |
| ! | AAAGCCAGACATTCTAGGGA+TGG | - | chr3_2:7734352-7734371 | Msa0393650:intron | 45.0% |
| TTGAACTTTCCACCAGCAAG+AGG | + | chr3_2:7734416-7734435 | None:intergenic | 45.0% | |
| TCACTTCTCCCGAAAATCAG+AGG | + | chr3_2:7734655-7734674 | None:intergenic | 45.0% | |
| TTCTGGTCAGGGTTCAAACT+CGG | - | chr3_2:7734707-7734726 | Msa0393650:intron | 45.0% | |
| ATAGTGGCATATTGGGGAGA+AGG | - | chr3_2:7734965-7734984 | Msa0393650:intron | 45.0% | |
| !! | GCTGATGGATTAGATTGCAC+TGG | + | chr3_2:7735007-7735026 | None:intergenic | 45.0% |
| GTGCAATCTAATCCATCAGC+TGG | - | chr3_2:7735007-7735026 | Msa0393650:intron | 45.0% | |
| AAAGGAAGAAGCAACCGTCT+TGG | - | chr3_2:7735040-7735059 | Msa0393650:intron | 45.0% | |
| !!! | GGTGATGGAATTGCTTTTCG+TGG | - | chr3_2:7735142-7735161 | Msa0393650:intron | 45.0% |
| CAAGACCATCAACCCAATCT+AGG | - | chr3_2:7735767-7735786 | Msa0393650:intron | 45.0% | |
| ATGGAAGGTCGAAGAAGAAG+GGG | + | chr3_2:7735854-7735873 | None:intergenic | 45.0% | |
| GATGGAAGGTCGAAGAAGAA+GGG | + | chr3_2:7735855-7735874 | None:intergenic | 45.0% | |
| ! | GCAGCAATTAGGCTAGTTCT+TGG | - | chr3_2:7735964-7735983 | Msa0393650:intron | 45.0% |
| ! | TGTGGTTGAGGATGGATTTG+TGG | + | chr3_2:7736007-7736026 | None:intergenic | 45.0% |
| !! | ACTTGGTTTGTGGTTGAGGA+TGG | + | chr3_2:7736015-7736034 | None:intergenic | 45.0% |
| CAAGTGACCATATCCCAGAA+CGG | - | chr3_2:7736498-7736517 | Msa0393650:intron | 45.0% | |
| AATCGTGTCCAGTGAATCGT+TGG | - | chr3_2:7737043-7737062 | Msa0393650:intron | 45.0% | |
| GCGAACAAAATCAGCGATAG+TGG | - | chr3_2:7737082-7737101 | Msa0393650:intron | 45.0% | |
| TTGATGTGATCTCGAGGAGT+TGG | - | chr3_2:7738238-7738257 | Msa0393650:intron | 45.0% | |
| TCTCAGAAGCCAAACCAAAC+AGG | - | chr3_2:7739053-7739072 | Msa0393650:intron | 45.0% | |
| GTGTGTTCGATTAAGGAGTC+AGG | - | chr3_2:7739935-7739954 | Msa0393650:intron | 45.0% | |
| GTGTTCGATTAAGGAGTCAG+GGG | - | chr3_2:7739937-7739956 | Msa0393650:intron | 45.0% | |
| TGTTCGATTAAGGAGTCAGG+GGG | - | chr3_2:7739938-7739957 | Msa0393650:intron | 45.0% | |
| AGACTAATTGTGGATCAGGG+AGG | - | chr3_2:7740043-7740062 | Msa0393650:intron | 45.0% | |
| TTGTGGATCAGGGAGGATTA+TGG | - | chr3_2:7740050-7740069 | Msa0393650:intron | 45.0% | |
| !! | ATGGTAAAAAGGCGTCACTC+TGG | - | chr3_2:7740125-7740144 | Msa0393650:intron | 45.0% |
| ! | CTTAGCGAGGGTGTAAAAGA+TGG | - | chr3_2:7740157-7740176 | Msa0393650:intron | 45.0% |
| !! | GGTGTAAAAGATGGTGGAGA+AGG | - | chr3_2:7740166-7740185 | Msa0393650:intron | 45.0% |
| !! | TGGTGGAGAAGGTTGTTTTG+TGG | - | chr3_2:7740177-7740196 | Msa0393650:intron | 45.0% |
| ! | GAGAGTGTGTGAGACACAAA+AGG | - | chr3_2:7741184-7741203 | Msa0393650:intron | 45.0% |
| TGTGTGAGACACAAAAGGTG+AGG | - | chr3_2:7741189-7741208 | Msa0393650:intron | 45.0% | |
| ! | GGTGAGGTTTTTGTATGTGC+GGG | - | chr3_2:7741205-7741224 | Msa0393650:intron | 45.0% |
| ! | GTGAGGTTTTTGTATGTGCG+GGG | - | chr3_2:7741206-7741225 | Msa0393650:intron | 45.0% |
| CAAGTGGTACATGTCACCTA+AGG | - | chr3_2:7741266-7741285 | Msa0393650:CDS | 45.0% | |
| GGTGATACATAGACCACCTT+AGG | + | chr3_2:7741285-7741304 | None:intergenic | 45.0% | |
| AGGATAAAAGACCAACCCTC+GGG | + | chr3_2:7741336-7741355 | None:intergenic | 45.0% | |
| AAAATTGGTACAAGGGTGGG+AGG | + | chr3_2:7741532-7741551 | None:intergenic | 45.0% | |
| GAGGAAAATTGGTACAAGGG+TGG | + | chr3_2:7741536-7741555 | None:intergenic | 45.0% | |
| GGGAAGAAATTGATGGGAAG+AGG | + | chr3_2:7741555-7741574 | None:intergenic | 45.0% | |
| CATTCTGCTACAACCAAGGT+TGG | + | chr3_2:7741594-7741613 | None:intergenic | 45.0% | |
| AGTGCATTCTGCTACAACCA+AGG | + | chr3_2:7741598-7741617 | None:intergenic | 45.0% | |
| ATTCTTTCAGGGCTTAAGGC+TGG | + | chr3_2:7741939-7741958 | None:intergenic | 45.0% | |
| ACTCCAAAAGTCTTGCTCAC+TGG | + | chr3_2:7731887-7731906 | None:intergenic | 45.0% | |
| !! | AGTGAGCAAGACTTTTGGAG+TGG | - | chr3_2:7731886-7731905 | Msa0393650:CDS | 45.0% |
| !! | TAAAGGTCGATTCGTGCATC+TGG | + | chr3_2:7742403-7742422 | None:intergenic | 45.0% |
| !! | TTCATATAATAAAAAATATA+TGG | + | chr3_2:7731795-7731814 | None:intergenic | 5.0% |
| !!! | ATTTAAAAATACATTTTATA+TGG | - | chr3_2:7738334-7738353 | Msa0393650:intron | 5.0% |
| CCAAAAGTCTTGCTCACTGG+AGG | + | chr3_2:7731884-7731903 | None:intergenic | 50.0% | |
| ! | CCTCCAGTGAGCAAGACTTT+TGG | - | chr3_2:7731881-7731900 | Msa0393650:CDS | 50.0% |
| AGTGTCCGGGATTCAAACCT+CGG | - | chr3_2:7732808-7732827 | Msa0393650:intron | 50.0% | |
| ATGAGCCGAGGTTTGAATCC+CGG | + | chr3_2:7732816-7732835 | None:intergenic | 50.0% | |
| AGCAGCCATCACCTAAGAGA+AGG | + | chr3_2:7732978-7732997 | None:intergenic | 50.0% | |
| GGAAAATGCTGGATAACGCG+AGG | - | chr3_2:7733905-7733924 | Msa0393650:intron | 50.0% | |
| AAATGCTGGATAACGCGAGG+TGG | - | chr3_2:7733908-7733927 | Msa0393650:intron | 50.0% | |
| !!! | ACCACGATGCCGTTTTTTCC+GGG | - | chr3_2:7734025-7734044 | Msa0393650:intron | 50.0% |
| TCATGCTGGCCCGGAAAAAA+CGG | + | chr3_2:7734037-7734056 | None:intergenic | 50.0% | |
| GGGCCAGCATGAATTGTGAT+TGG | - | chr3_2:7734045-7734064 | Msa0393650:intron | 50.0% | |
| ! | GATTGGTCCAACAAAGCCTC+GGG | - | chr3_2:7734062-7734081 | Msa0393650:intron | 50.0% |
| GCAACCATCCCTAGAATGTC+TGG | + | chr3_2:7734359-7734378 | None:intergenic | 50.0% | |
| ! | GACATTCTAGGGATGGTTGC+AGG | - | chr3_2:7734359-7734378 | Msa0393650:intron | 50.0% |
| ACAGTGCTTCATCCTCTTGC+TGG | - | chr3_2:7734401-7734420 | Msa0393650:intron | 50.0% | |
| TCTGGTCAGGGTTCAAACTC+GGG | - | chr3_2:7734708-7734727 | Msa0393650:intron | 50.0% | |
| TTCCCCTCAGCAGCAAAATC+AGG | - | chr3_2:7735120-7735139 | Msa0393650:intron | 50.0% | |
| TCCCCTCAGCAGCAAAATCA+GGG | - | chr3_2:7735121-7735140 | Msa0393650:intron | 50.0% | |
| ! | ACCCTGATTTTGCTGCTGAG+GGG | + | chr3_2:7735125-7735144 | None:intergenic | 50.0% |
| ! | CACCCTGATTTTGCTGCTGA+GGG | + | chr3_2:7735126-7735145 | None:intergenic | 50.0% |
| ! | TCACCCTGATTTTGCTGCTG+AGG | + | chr3_2:7735127-7735146 | None:intergenic | 50.0% |
| CAGCAGCAAAATCAGGGTGA+TGG | - | chr3_2:7735127-7735146 | Msa0393650:intron | 50.0% | |
| GGATGGAAGGTCGAAGAAGA+AGG | + | chr3_2:7735856-7735875 | None:intergenic | 50.0% | |
| !! | CCACACTTGGTTTGTGGTTG+AGG | + | chr3_2:7736019-7736038 | None:intergenic | 50.0% |
| CCTCAACCACAAACCAAGTG+TGG | - | chr3_2:7736016-7736035 | Msa0393650:intron | 50.0% | |
| !! | TCTAGCTCCGTTCTGGGATA+TGG | + | chr3_2:7736508-7736527 | None:intergenic | 50.0% |
| ! | GTCCAGTGAATCGTTGGTAG+TGG | - | chr3_2:7737049-7737068 | Msa0393650:intron | 50.0% |
| AGCCACTACCAACGATTCAC+TGG | + | chr3_2:7737054-7737073 | None:intergenic | 50.0% | |
| CACTAAGGGCCTGTTTGGTT+TGG | + | chr3_2:7739065-7739084 | None:intergenic | 50.0% | |
| ! | GGTTTGTGTCACTACCACCA+TGG | + | chr3_2:7739118-7739137 | None:intergenic | 50.0% |
| AGCGCAAACCGACCATAGAT+AGG | + | chr3_2:7739814-7739833 | None:intergenic | 50.0% | |
| GATTAAGGAGTCAGGGGGTT+AGG | - | chr3_2:7739943-7739962 | Msa0393650:intron | 50.0% | |
| !! | GTAAAAAGGCGTCACTCTGG+TGG | - | chr3_2:7740128-7740147 | Msa0393650:intron | 50.0% |
| TGGTGGAAGGATCTTAGCGA+GGG | - | chr3_2:7740145-7740164 | Msa0393650:intron | 50.0% | |
| ! | AGCGAGGGTGTAAAAGATGG+TGG | - | chr3_2:7740160-7740179 | Msa0393650:intron | 50.0% |
| !!! | GTCTTTTTGGGCTGGTTCTC+TGG | - | chr3_2:7740771-7740790 | Msa0393650:intron | 50.0% |
| CACACACTCTCACATGAGAG+TGG | + | chr3_2:7741175-7741194 | None:intergenic | 50.0% | |
| GTGGTACATGTCACCTAAGG+TGG | - | chr3_2:7741269-7741288 | Msa0393650:CDS | 50.0% | |
| AAAGACCAACCCTCGGGTAA+TGG | + | chr3_2:7741330-7741349 | None:intergenic | 50.0% | |
| GGTGTCTGTATTCCACAGCT+AGG | - | chr3_2:7741708-7741727 | Msa0393650:CDS | 50.0% | |
| TTCTACCTAGCAGTGGCTTG+AGG | - | chr3_2:7741786-7741805 | Msa0393650:intron | 50.0% | |
| ATTGACCTCAAGCCACTGCT+AGG | + | chr3_2:7741794-7741813 | None:intergenic | 50.0% | |
| TGCAGAGAGCAAACGACTTC+AGG | - | chr3_2:7742041-7742060 | Msa0393650:CDS | 50.0% | |
| GTGCTAGCATAGCCCATGGA+AGG | + | chr3_2:7734307-7734326 | None:intergenic | 55.0% | |
| ! | TCCATGGGCTATGCTAGCAC+TGG | - | chr3_2:7734307-7734326 | Msa0393650:intron | 55.0% |
| TCCAGTGCTAGCATAGCCCA+TGG | + | chr3_2:7734311-7734330 | None:intergenic | 55.0% | |
| GTGCTTCATCCTCTTGCTGG+TGG | - | chr3_2:7734404-7734423 | Msa0393650:intron | 55.0% | |
| GGAAGAAGCAACCGTCTTGG+TGG | - | chr3_2:7735043-7735062 | Msa0393650:intron | 55.0% | |
| !! | GGTCTCATGGGCTAGATGTC+CGG | - | chr3_2:7735298-7735317 | Msa0393650:intron | 55.0% |
| TAAGGAGTCAGGGGGTTAGG+AGG | - | chr3_2:7739946-7739965 | Msa0393650:intron | 55.0% | |
| GTCAGGGGGTTAGGAGGTTT+AGG | - | chr3_2:7739952-7739971 | Msa0393650:intron | 55.0% | |
| GCGGGGTTCGAGACTAATTG+TGG | - | chr3_2:7740033-7740052 | Msa0393650:intron | 55.0% | |
| !! | AAAGGCGTCACTCTGGTGGA+AGG | - | chr3_2:7740132-7740151 | Msa0393650:intron | 55.0% |
| CTGGTGGAAGGATCTTAGCG+AGG | - | chr3_2:7740144-7740163 | Msa0393650:intron | 55.0% | |
| TTGTATGTGCGGGGACCACA+TGG | - | chr3_2:7741215-7741234 | Msa0393650:intron | 55.0% | |
| GGTGGTCTATGTATCACCGC+CGG | - | chr3_2:7741287-7741306 | Msa0393650:CDS | 55.0% | |
| TTGCTCCATTACCCGAGGGT+TGG | - | chr3_2:7741322-7741341 | Msa0393650:intron | 55.0% | |
| GGTACAAGGGTGGGAGGATA+CGG | + | chr3_2:7741526-7741545 | None:intergenic | 55.0% | |
| ACGCATTTGCAGCCTAGCTG+TGG | + | chr3_2:7741723-7741742 | None:intergenic | 55.0% | |
| GCCCGGAAAAAACGGCATCG+TGG | + | chr3_2:7734029-7734048 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 7731361 | 7742572 | 7731361 | ID=Msa0393650;Name=Msa0393650 |
| chr3_2 | mRNA | 7731361 | 7742572 | 7731361 | ID=Msa0393650-mRNA-1;Parent=Msa0393650;Name=Msa0393650-mRNA-1;_AED=0.20;_eAED=0.20;_QI=64|0.57|0.75|1|0.57|0.75|8|128|276 |
| chr3_2 | exon | 7731361 | 7731646 | 7731361 | ID=Msa0393650-mRNA-1:exon:2029;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7731867 | 7731964 | 7731867 | ID=Msa0393650-mRNA-1:exon:2028;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7739477 | 7739637 | 7739477 | ID=Msa0393650-mRNA-1:exon:2027;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7740819 | 7740947 | 7740819 | ID=Msa0393650-mRNA-1:exon:2026;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7741252 | 7741309 | 7741252 | ID=Msa0393650-mRNA-1:exon:2025;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7741689 | 7741762 | 7741689 | ID=Msa0393650-mRNA-1:exon:2024;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7741933 | 7742068 | 7741933 | ID=Msa0393650-mRNA-1:exon:2023;Parent=Msa0393650-mRNA-1 |
| chr3_2 | exon | 7742492 | 7742572 | 7742492 | ID=Msa0393650-mRNA-1:exon:2022;Parent=Msa0393650-mRNA-1 |
| chr3_2 | five_prime_UTR | 7742509 | 7742572 | 7742509 | ID=Msa0393650-mRNA-1:five_prime_utr;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7742492 | 7742508 | 7742492 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7741933 | 7742068 | 7741933 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7741689 | 7741762 | 7741689 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7741252 | 7741309 | 7741252 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7740819 | 7740947 | 7740819 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7739477 | 7739637 | 7739477 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7731867 | 7731964 | 7731867 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | CDS | 7731489 | 7731646 | 7731489 | ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1 |
| chr3_2 | three_prime_UTR | 7731361 | 7731488 | 7731361 | ID=Msa0393650-mRNA-1:three_prime_utr;Parent=Msa0393650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
