AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0393650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0393650 MtrunA17_Chr3g0079071 89.151 212 11 1 1 200 1 212 8.21e-134 379
Msa0393650 MtrunA17_Chr8g0389711 57.328 232 87 1 1 220 1 232 1.22e-92 273
Msa0393650 MtrunA17_Chr2g0288201 31.579 209 122 2 6 193 7 215 1.05e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0393650 AT4G29330.2 58.373 209 75 1 1 197 1 209 2.30e-85 254
Msa0393650 AT4G29330.1 58.454 207 74 1 1 195 1 207 5.94e-85 255
Msa0393650 AT4G04860.1 30.732 205 121 2 6 189 7 211 3.20e-28 108
Msa0393650 AT4G21810.1 30.732 205 121 2 6 189 7 211 6.59e-27 105

Find 55 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCAAGAATCAACATTTA+TGG 0.126417 3_2:-7740835 Msa0393650:CDS
CCTAGAATGTCTGGCTTTAA+AGG 0.141829 3_2:+7739564 None:intergenic
ATCACAAATTTCTTCTTTCT+TGG 0.159647 3_2:-7741728 Msa0393650:CDS
CGACCTTTATGACTTGTTAA+AGG 0.187449 3_2:-7731497 Msa0393650:CDS
CCTTTAAAGCCAGACATTCT+AGG 0.260364 3_2:-7739564 Msa0393650:CDS
TGGCTGCTGTGCCATATTTA+TGG 0.282477 3_2:-7740921 Msa0393650:CDS
TTTAATGTTTCAGATACTTC+TGG 0.287318 3_2:-7742059 Msa0393650:intron
CTTAGTGTTTAAACGACTTC+AGG 0.309739 3_2:-7741932 Msa0393650:intron
CCTCCAGTGAGCAAGACTTT+TGG 0.313821 3_2:-7742030 Msa0393650:CDS
CTAGCACTGGATTTGATATT+CGG 0.313829 3_2:-7739591 Msa0393650:CDS
TAAATGTTGATTCTTGCATT+TGG 0.332736 3_2:+7740838 None:intergenic
GTAGCTTGATTGTCTATGTT+TGG 0.341104 3_2:-7731546 Msa0393650:CDS
TGCAGAGAGCAAACGACTTC+AGG 0.341994 3_2:-7731870 Msa0393650:CDS
ACAGTGCTTCATCCTCTTGC+TGG 0.343953 3_2:-7739510 Msa0393650:CDS
ATCACAAATTTCTTCTTTCG+TGG 0.350859 3_2:-7731612 Msa0393650:CDS
AGCAAAATATGGTGTTTCAT+TGG 0.351511 3_2:-7741287 Msa0393650:CDS
ATGAATGGAGACCATAAATA+TGG 0.359019 3_2:+7740910 None:intergenic
AATCCAGTGAGCAAGACTTT+TGG 0.359069 3_2:-7731941 Msa0393650:CDS
AAGAATCAACATTTATGGTT+TGG 0.373235 3_2:-7740830 Msa0393650:CDS
ACTGCAAATTGAAATGAAAA+TGG 0.377021 3_2:+7731588 None:intergenic
ATATTTATGGTCTCCATTCA+TGG 0.388255 3_2:-7740908 Msa0393650:CDS
TAGACATTATTGAACGAAAT+AGG 0.391186 3_2:+7742502 None:intergenic
TAAAGGTCGATTCGTGCATC+TGG 0.394970 3_2:+7731511 None:intergenic
ACTGCAAATGGAAATGAAAA+TGG 0.398146 3_2:+7741704 None:intergenic
AAAATCAATCAATAGTTTGA+TGG 0.401835 3_2:-7731419 Msa0393650:three_prime_UTR
GACATTCTAGGGATGGTTGC+AGG 0.419213 3_2:-7739552 Msa0393650:CDS
TTATGGTTTGGTATCATTGA+AGG 0.428421 3_2:-7740818 Msa0393650:intron
GAATTGTACAGAGCAAAATA+TGG 0.430905 3_2:-7741298 Msa0393650:intron
TCTGCAGTTCTCTTGTCAAA+TGG 0.435050 3_2:+7741256 None:intergenic
GCAACCATCCCTAGAATGTC+TGG 0.438466 3_2:+7739555 None:intergenic
ACTAAAGAAATTCCCATGAA+TGG 0.439121 3_2:+7740895 None:intergenic
TATATCTATTGCAGGTTTGG+AGG 0.439394 3_2:-7741754 Msa0393650:intron
ATTATCAGACGAACTGCAAA+TGG 0.441501 3_2:+7741692 None:intergenic
TACATTTGTTGCAGGTTTGG+AGG 0.445092 3_2:-7731638 Msa0393650:intron
CTTTAAAGCCAGACATTCTA+GGG 0.471915 3_2:-7739563 Msa0393650:CDS
ACTCCAAAAGTCTTGCTCAC+TGG 0.485579 3_2:+7731938 None:intergenic
ACTCCAAAAGTCTTGCTCAC+TGG 0.489230 3_2:+7742027 None:intergenic
TATTTATGGTCTCCATTCAT+GGG 0.507960 3_2:-7740907 Msa0393650:CDS
TTCTTGCATTTGGAAATTCA+CGG 0.511989 3_2:+7740848 None:intergenic
TGAGAAAGAGATTACTCTGC+TGG 0.513267 3_2:+7742477 None:intergenic
TCCATGGGCTATGCTAGCAC+TGG 0.517192 3_2:-7739604 Msa0393650:CDS
AACACTATGAAGCACAAGAA+AGG 0.518292 3_2:+7742548 None:intergenic
TATGGTGTTTCATTGGAAAG+AGG 0.521644 3_2:-7741280 Msa0393650:CDS
ATACCTTTAACAAGTCATAA+AGG 0.527510 3_2:+7731494 None:intergenic
AAAGCCAGACATTCTAGGGA+TGG 0.549511 3_2:-7739559 Msa0393650:CDS
GTGCTTCATCCTCTTGCTGG+TGG 0.558055 3_2:-7739507 Msa0393650:CDS
ATTTGTTTCTCATATGAGAT+CGG 0.560412 3_2:-7731364 Msa0393650:three_prime_UTR
TTGAACTTTCCACCAGCAAG+AGG 0.576756 3_2:+7739498 None:intergenic
AGAAAAGGATACACTAAGAG+AGG 0.581080 3_2:+7739465 None:intergenic
TCCAGTGCTAGCATAGCCCA+TGG 0.608359 3_2:+7739603 None:intergenic
GTGCTAGCATAGCCCATGGA+AGG 0.612546 3_2:+7739607 None:intergenic
TTCGTGCATCTGGAAATTCA+CGG 0.617311 3_2:+7731521 None:intergenic
CCAAAAGTCTTGCTCACTGG+AGG 0.629915 3_2:+7742030 None:intergenic
ATTCATATAATATGCAGCTG+TGG 0.634214 3_2:+7741990 None:intergenic
ATTCAGATAATATGCAGCTG+TGG 0.649892 3_2:+7731901 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATTTATTAATTTT+CGG + chr3_2:7732054-7732073 None:intergenic 0.0%
!!! TAATAAATTTTAAAAAATTA+TGG - chr3_2:7738360-7738379 Msa0393650:intron 0.0%
!!! TAATTTTTTTATATAAAATT+AGG - chr3_2:7741044-7741063 Msa0393650:intron 0.0%
!!! AATTTTTTTATATAAAATTA+GGG - chr3_2:7741045-7741064 Msa0393650:intron 0.0%
!!! TTTTTAAATTTCAATGTTTA+AGG + chr3_2:7732025-7732044 None:intergenic 10.0%
!!! TCTCAATTAATATTTTAATA+TGG - chr3_2:7733884-7733903 Msa0393650:intron 10.0%
!! AACAATTAAATAAAATCAAA+GGG + chr3_2:7733974-7733993 None:intergenic 10.0%
!! AAACAATTAAATAAAATCAA+AGG + chr3_2:7733975-7733994 None:intergenic 10.0%
!! AAAATTAACATTCTTTAAAT+TGG - chr3_2:7735680-7735699 Msa0393650:intron 10.0%
!!! GACTTTTTTTTTTTAAAAAA+AGG + chr3_2:7735720-7735739 None:intergenic 10.0%
!! AATTCAAATTAATTTAATGA+AGG + chr3_2:7738073-7738092 None:intergenic 10.0%
!! AAAAAAAAATTATACACTAA+GGG + chr3_2:7739079-7739098 None:intergenic 10.0%
!!! AATCTAAAACATTTTTTTTA+AGG - chr3_2:7740327-7740346 Msa0393650:intron 10.0%
!!! ATCTAAAACATTTTTTTTAA+GGG - chr3_2:7740328-7740347 Msa0393650:intron 10.0%
!!! AAATTGTATCAATTTTTTTA+AGG - chr3_2:7740382-7740401 Msa0393650:intron 10.0%
!!! AATTGTATCAATTTTTTTAA+GGG - chr3_2:7740383-7740402 Msa0393650:intron 10.0%
!! GTTTATAAAGTAATAATTAA+GGG + chr3_2:7740496-7740515 None:intergenic 10.0%
!! TGTTTATAAAGTAATAATTA+AGG + chr3_2:7740497-7740516 None:intergenic 10.0%
!!! AGAAAAATATCTTTTAATAT+CGG - chr3_2:7741095-7741114 Msa0393650:intron 10.0%
!! TTGCATATATGAAATATAAA+TGG - chr3_2:7731532-7731551 Msa0393650:CDS 15.0%
!!! AATATAATTTTGGTGAAATT+TGG + chr3_2:7731603-7731622 None:intergenic 15.0%
!!! GCATAATCAAAATATAATTT+TGG + chr3_2:7731613-7731632 None:intergenic 15.0%
!! TATTAATTTATTATCCATGA+TGG - chr3_2:7731665-7731684 Msa0393650:intron 15.0%
!!! TTTTTATTTATATCTATTGC+AGG - chr3_2:7732149-7732168 Msa0393650:intron 15.0%
!!! TTAACTTTTTTTTTTTCAGT+TGG - chr3_2:7732891-7732910 Msa0393650:intron 15.0%
!! AAATAAAAGGAACAAAAAAA+GGG + chr3_2:7732944-7732963 None:intergenic 15.0%
!! TAAATAAAAGGAACAAAAAA+AGG + chr3_2:7732945-7732964 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr3_2:7733335-7733354 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr3_2:7733334-7733353 Msa0393650:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr3_2:7733358-7733377 Msa0393650:intron 15.0%
!! TGCTAAAAAAAACATAATAA+TGG + chr3_2:7734204-7734223 None:intergenic 15.0%
!! AAATCATATTCATTTATGAT+TGG + chr3_2:7734247-7734266 None:intergenic 15.0%
!!! TTAGCTTATATTTTTACAAT+AGG - chr3_2:7734835-7734854 Msa0393650:intron 15.0%
!!! ACTAAATTATACTTTTAACT+CGG + chr3_2:7736549-7736568 None:intergenic 15.0%
!!! CTTGAAATTTCTTATAATTT+TGG + chr3_2:7736642-7736661 None:intergenic 15.0%
!! CAAAATTATAAGAAATTTCA+AGG - chr3_2:7736640-7736659 Msa0393650:intron 15.0%
!!! AAGAAATATATGTTTTACAT+TGG + chr3_2:7737753-7737772 None:intergenic 15.0%
!!! AAATATGTTGATGATAAATT+AGG - chr3_2:7738192-7738211 Msa0393650:intron 15.0%
!! TAAACAAAATGATTTATGTT+TGG - chr3_2:7738727-7738746 Msa0393650:intron 15.0%
!! TAATTACTAAAATAGACTAA+AGG - chr3_2:7738781-7738800 Msa0393650:intron 15.0%
!! GAAAAAAAAATTATACACTA+AGG + chr3_2:7739080-7739099 None:intergenic 15.0%
!! TATTGAAAGAAAAAAAAACA+AGG - chr3_2:7739363-7739382 Msa0393650:intron 15.0%
!!! AAATATAAGGGTAATTTTAT+AGG + chr3_2:7739473-7739492 None:intergenic 15.0%
!! TATAAGCAAACATTTATATT+CGG - chr3_2:7739614-7739633 Msa0393650:CDS 15.0%
!!! GTATTTTTATTTTTGAATGT+TGG - chr3_2:7739660-7739679 Msa0393650:intron 15.0%
!! TACTTTATAAACAAAATTCT+AGG - chr3_2:7740504-7740523 Msa0393650:intron 15.0%
!! TTGAATTTATATTATGAATC+TGG - chr3_2:7740879-7740898 Msa0393650:CDS 15.0%
!!! TAAGGTTTAAATTTTTTCAA+TGG - chr3_2:7740978-7740997 Msa0393650:intron 15.0%
!! CATATATGCAATAAACTAAA+AGG + chr3_2:7731523-7731542 None:intergenic 20.0%
!! AAAAAATATATGGTATAGCA+AGG + chr3_2:7731785-7731804 None:intergenic 20.0%
!!! AATGTTTAAGGATAAGTTTT+TGG + chr3_2:7732013-7732032 None:intergenic 20.0%
!!! ATTGTCATTTTGTAAATTTG+AGG - chr3_2:7732377-7732396 Msa0393650:intron 20.0%
!!! TTGTCATTTTGTAAATTTGA+GGG - chr3_2:7732378-7732397 Msa0393650:intron 20.0%
!! ATTAATAAGTAATTAGTGTC+CGG - chr3_2:7732794-7732813 Msa0393650:intron 20.0%
!! GGATGAAACTAATAAATAAA+AGG + chr3_2:7732957-7732976 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr3_2:7733344-7733363 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr3_2:7733421-7733440 Msa0393650:intron 20.0%
!! CATTTATATTCTCAAATTGT+TGG + chr3_2:7733561-7733580 None:intergenic 20.0%
!!! TTGAGAAAATAAAAGTGTAT+TGG - chr3_2:7733614-7733633 Msa0393650:intron 20.0%
!!! TTTTATCAACTCTTCAATTT+TGG - chr3_2:7733735-7733754 Msa0393650:intron 20.0%
!!! TTTATCAACTCTTCAATTTT+GGG - chr3_2:7733736-7733755 Msa0393650:intron 20.0%
!! TCTAATTGAGATATTCAAAT+GGG + chr3_2:7733854-7733873 None:intergenic 20.0%
!! ATCTAATTGAGATATTCAAA+TGG + chr3_2:7733855-7733874 None:intergenic 20.0%
!!! TATTTTAATATGGAAAATGC+TGG - chr3_2:7733894-7733913 Msa0393650:intron 20.0%
!! AAATTCTTGATAAAAAGCTT+CGG - chr3_2:7734087-7734106 Msa0393650:intron 20.0%
!! TTTATGCATTTGAATTAATG+TGG - chr3_2:7734135-7734154 Msa0393650:intron 20.0%
!!! ATATCATGAATACTTTTTGT+TGG - chr3_2:7734176-7734195 Msa0393650:intron 20.0%
!!! ATTAATACTTTTTGTTCTGT+AGG - chr3_2:7734274-7734293 Msa0393650:intron 20.0%
!!! TTAATACTTTTTGTTCTGTA+GGG - chr3_2:7734275-7734294 Msa0393650:intron 20.0%
!! AAGCTGATATATAATAGAAA+AGG + chr3_2:7734464-7734483 None:intergenic 20.0%
!!! TGACATTTTGAAATGAAATA+TGG + chr3_2:7734548-7734567 None:intergenic 20.0%
!!! TTTTTTAATCCTCTGATTTT+CGG - chr3_2:7734643-7734662 Msa0393650:intron 20.0%
!! AGTTTAACTAATAATTGTTC+TGG - chr3_2:7734690-7734709 Msa0393650:intron 20.0%
!!! TTTTATGTTAAATCAGTTAG+TGG - chr3_2:7735421-7735440 Msa0393650:intron 20.0%
!! TTTATGTTAAATCAGTTAGT+GGG - chr3_2:7735422-7735441 Msa0393650:intron 20.0%
!! TACATTGGAAATTAAATTCA+TGG + chr3_2:7735475-7735494 None:intergenic 20.0%
!! AATTGTTAATCATATCATAG+TGG + chr3_2:7735514-7735533 None:intergenic 20.0%
!! ACCACTCAATTTAAATTTAA+GGG + chr3_2:7735550-7735569 None:intergenic 20.0%
!! AACCACTCAATTTAAATTTA+AGG + chr3_2:7735551-7735570 None:intergenic 20.0%
!!! CACATTTTGACTAAAAAATA+TGG - chr3_2:7735606-7735625 Msa0393650:intron 20.0%
!!! ATGTTAATTTTTACGTGTTT+TGG + chr3_2:7735671-7735690 None:intergenic 20.0%
!!! TATCTTTGTCAAATGTTTTT+CGG - chr3_2:7736224-7736243 Msa0393650:intron 20.0%
!! GAAATAGAAATAAATTGCAA+TGG - chr3_2:7736419-7736438 Msa0393650:intron 20.0%
!! TATGAAAGTTAAGTACATTA+TGG - chr3_2:7736938-7736957 Msa0393650:intron 20.0%
!!! TACTTAGTCTTACATTTTTT+TGG + chr3_2:7736968-7736987 None:intergenic 20.0%
!! TTTGTTTGAACTCATTATAT+TGG + chr3_2:7737257-7737276 None:intergenic 20.0%
!! ATATAATGAGTTCAAACAAA+AGG - chr3_2:7737257-7737276 Msa0393650:intron 20.0%
!! TTATGAACTTTATATGATGT+TGG + chr3_2:7737291-7737310 None:intergenic 20.0%
!!! CAACTATGTTTTGATTTTTT+AGG - chr3_2:7737345-7737364 Msa0393650:intron 20.0%
!!! CTTGAAGATTTTTTATGTTA+CGG - chr3_2:7737770-7737789 Msa0393650:intron 20.0%
!! CAAATTAATTTAATGAAGGA+AGG + chr3_2:7738069-7738088 None:intergenic 20.0%
!! TAAAACTAGTATAACATGTT+TGG - chr3_2:7738169-7738188 Msa0393650:intron 20.0%
!! AAATTAAGAATCACATCAAA+AGG + chr3_2:7738318-7738337 None:intergenic 20.0%
!! TATGTAAATACTACTACAAT+AGG - chr3_2:7738505-7738524 Msa0393650:intron 20.0%
!! ATGTAAATACTACTACAATA+GGG - chr3_2:7738506-7738525 Msa0393650:intron 20.0%
!!! TGAAAATTGATTTTTGACAT+AGG - chr3_2:7738543-7738562 Msa0393650:intron 20.0%
!! TAACGAATGATAATTGATAA+AGG - chr3_2:7738812-7738831 Msa0393650:intron 20.0%
!! AACGAATGATAATTGATAAA+GGG - chr3_2:7738813-7738832 Msa0393650:intron 20.0%
!!! ATTTATTTGTTTTTTCTACC+TGG + chr3_2:7739332-7739351 None:intergenic 20.0%
!!! ATAGTTATATGTTCTAAAAG+CGG - chr3_2:7739408-7739427 Msa0393650:intron 20.0%
!! ATTACCCTTATATTTAAACT+TGG - chr3_2:7739478-7739497 Msa0393650:CDS 20.0%
!! CAAACCAAGTTTAAATATAA+GGG + chr3_2:7739485-7739504 None:intergenic 20.0%
!! TCAAACCAAGTTTAAATATA+AGG + chr3_2:7739486-7739505 None:intergenic 20.0%
!!! TTTTTTTTTTTGAGAGATGT+AGG - chr3_2:7739556-7739575 Msa0393650:CDS 20.0%
!! AACTAAAATCTATCAATGAT+CGG - chr3_2:7739763-7739782 Msa0393650:intron 20.0%
!! AAGAACGAAAGAAAATAAAT+TGG + chr3_2:7739859-7739878 None:intergenic 20.0%
!!! AATATTCTTTTGAATGAGTT+TGG - chr3_2:7740536-7740555 Msa0393650:intron 20.0%
!!! AAAAAATGCAAATGTCTTTT+TGG - chr3_2:7740758-7740777 Msa0393650:intron 20.0%
!!! AAAAATGCAAATGTCTTTTT+GGG - chr3_2:7740759-7740778 Msa0393650:intron 20.0%
!!! ATTAATTTGTGGAGAAAATA+AGG - chr3_2:7740960-7740979 Msa0393650:intron 20.0%
!! GTAAGAAGTTGAAAAAAATT+AGG + chr3_2:7741393-7741412 None:intergenic 20.0%
!! TGAAAGTAATGAGATATTTA+AGG + chr3_2:7741457-7741476 None:intergenic 20.0%
!! ACTTTATAACAATTCTTTCA+GGG + chr3_2:7741950-7741969 None:intergenic 20.0%
!! TACTTTATAACAATTCTTTC+AGG + chr3_2:7741951-7741970 None:intergenic 20.0%
!!! AAACACCTTTTAAATATGAA+TGG + chr3_2:7742098-7742117 None:intergenic 20.0%
!! GAAAATGAATTTACAGTATT+AGG + chr3_2:7742214-7742233 None:intergenic 20.0%
!! AAAATCAATCAATAGTTTGA+TGG - chr3_2:7742492-7742511 Msa0393650:exon 20.0%
! TAGACATTATTGAACGAAAT+AGG + chr3_2:7731412-7731431 None:intergenic 25.0%
! TTTAATGTTTCAGATACTTC+TGG - chr3_2:7731852-7731871 Msa0393650:intron 25.0%
!! TTTTCAGTATTAGTATGCAA+TGG + chr3_2:7732082-7732101 None:intergenic 25.0%
! ATTTATATCTATTGCAGGTT+TGG - chr3_2:7732154-7732173 Msa0393650:intron 25.0%
! ATCACAAATTTCTTCTTTCT+TGG - chr3_2:7732183-7732202 Msa0393650:intron 25.0%
! ATTATGTGATCACAATTTCA+GGG - chr3_2:7732349-7732368 Msa0393650:intron 25.0%
! GTTCAAAACTTACAATTTCA+AGG - chr3_2:7732408-7732427 Msa0393650:intron 25.0%
! TTTGTTTGGATGTTGATATT+TGG - chr3_2:7732679-7732698 Msa0393650:intron 25.0%
!! TTTAATTTCAAGTAGTCTGA+TGG - chr3_2:7732758-7732777 Msa0393650:intron 25.0%
! TAGTCTGATGGTTAAAAATT+CGG - chr3_2:7732770-7732789 Msa0393650:intron 25.0%
! TTAATAAGTAATTAGTGTCC+GGG - chr3_2:7732795-7732814 Msa0393650:intron 25.0%
!! TTTTCATGATTGTCTATGTT+TGG - chr3_2:7733038-7733057 Msa0393650:intron 25.0%
!!! TAAATGTTGATTCTTGCATT+TGG + chr3_2:7733076-7733095 None:intergenic 25.0%
! AATGCAAGAATCAACATTTA+TGG - chr3_2:7733076-7733095 Msa0393650:intron 25.0%
! AAGAATCAACATTTATGGTT+TGG - chr3_2:7733081-7733100 Msa0393650:intron 25.0%
! ATTATCAAAAGAAGAGTCAT+TGG + chr3_2:7733131-7733150 None:intergenic 25.0%
! ATGAATGAGCAGATAAAATT+AGG - chr3_2:7733527-7733546 Msa0393650:intron 25.0%
! GCAAATGTGACAATTATTAT+AGG - chr3_2:7733675-7733694 Msa0393650:intron 25.0%
!! TTATCAACTCTTCAATTTTG+GGG - chr3_2:7733737-7733756 Msa0393650:intron 25.0%
!! ACTGCTACTTCAAAAAAATA+TGG - chr3_2:7734000-7734019 Msa0393650:intron 25.0%
!! CTGCTACTTCAAAAAAATAT+GGG - chr3_2:7734001-7734020 Msa0393650:intron 25.0%
! AATTCTTGATAAAAAGCTTC+GGG - chr3_2:7734088-7734107 Msa0393650:intron 25.0%
!! ATGATTGGTTAAAAGCATAA+TGG + chr3_2:7734232-7734251 None:intergenic 25.0%
! TATTATATATCAGCTTGCAA+TGG - chr3_2:7734468-7734487 Msa0393650:intron 25.0%
!! TTTTTAATCCTCTGATTTTC+GGG - chr3_2:7734644-7734663 Msa0393650:intron 25.0%
!!! TGACTAGTTTACTTAAGTTA+AGG + chr3_2:7734941-7734960 None:intergenic 25.0%
! TCCCTTAAATTTAAATTGAG+TGG - chr3_2:7735546-7735565 Msa0393650:intron 25.0%
! AATGTGATGTAAATGCAAAA+GGG + chr3_2:7735592-7735611 None:intergenic 25.0%
! AAATGTGATGTAAATGCAAA+AGG + chr3_2:7735593-7735612 None:intergenic 25.0%
! TTTGACTAAAAAATATGGTG+TGG - chr3_2:7735611-7735630 Msa0393650:intron 25.0%
!! TTTTAACGAATACCTAGATT+GGG + chr3_2:7735782-7735801 None:intergenic 25.0%
!! TTTTTAACGAATACCTAGAT+TGG + chr3_2:7735783-7735802 None:intergenic 25.0%
! TATTAACAAAGAGACTTAAC+TGG - chr3_2:7736283-7736302 Msa0393650:intron 25.0%
! AGTTGAGAGTAACTTAAATA+AGG - chr3_2:7736361-7736380 Msa0393650:intron 25.0%
! AGCTAGAAATTAAACTTAGA+GGG - chr3_2:7736521-7736540 Msa0393650:intron 25.0%
! TAAGAAATTTCAAGGATACA+AGG - chr3_2:7736648-7736667 Msa0393650:intron 25.0%
! AAGAAATTTCAAGGATACAA+GGG - chr3_2:7736649-7736668 Msa0393650:intron 25.0%
! TCTTGTAATTGTGATTTCAT+TGG - chr3_2:7736780-7736799 Msa0393650:intron 25.0%
! CAAACTCTTATTCTCTATTA+TGG - chr3_2:7736899-7736918 Msa0393650:intron 25.0%
! TAGGATTGTAGTTAAAGATT+AGG - chr3_2:7737138-7737157 Msa0393650:intron 25.0%
! AACAACAACAAAAAAAAGTG+AGG + chr3_2:7737188-7737207 None:intergenic 25.0%
! GACTCATTATCATTATATTG+TGG - chr3_2:7737367-7737386 Msa0393650:intron 25.0%
! ACATTTCAAACTATGTAACA+AGG + chr3_2:7737485-7737504 None:intergenic 25.0%
!! AAGACAATATTTCCTTTTGT+GGG + chr3_2:7737850-7737869 None:intergenic 25.0%
! CTTCTTGCTTAATTTAAGTA+AGG + chr3_2:7737982-7738001 None:intergenic 25.0%
! ACTTAAATTAAGCAAGAAGA+AGG - chr3_2:7737983-7738002 Msa0393650:intron 25.0%
! TTTACTTGATTTACAGTGTT+TGG - chr3_2:7738112-7738131 Msa0393650:intron 25.0%
!!! ATGGATTTTAAAATTGTGAG+TGG - chr3_2:7738379-7738398 Msa0393650:intron 25.0%
!!! AAGTTTTGTCCTTTGTATAA+TGG - chr3_2:7738447-7738466 Msa0393650:intron 25.0%
!! CTTTTGAATCCATTATACAA+AGG + chr3_2:7738459-7738478 None:intergenic 25.0%
! GTGACATATTCTAATTTAGT+TGG - chr3_2:7738591-7738610 Msa0393650:intron 25.0%
!! TGAGAGAATTGATTTATGTT+TGG - chr3_2:7738683-7738702 Msa0393650:intron 25.0%
!!! TTTTTGGCTAGAATTACTTT+TGG - chr3_2:7738996-7739015 Msa0393650:intron 25.0%
!! TATATTTTCGTTTTACTACC+AGG - chr3_2:7739311-7739330 Msa0393650:intron 25.0%
! TGGTTTGAATAATGACAAAT+TGG - chr3_2:7739498-7739517 Msa0393650:CDS 25.0%
!!! TTTTGTCAAAAAGTATGTGT+AGG - chr3_2:7739523-7739542 Msa0393650:CDS 25.0%
! GAATGTTGGATAGAAATTTA+AGG - chr3_2:7739674-7739693 Msa0393650:intron 25.0%
! AATGATCGGTAAAATCATTA+TGG - chr3_2:7739777-7739796 Msa0393650:intron 25.0%
! ATAAGAGAAACAATATACGT+GGG + chr3_2:7739889-7739908 None:intergenic 25.0%
! AATAAGAGAAACAATATACG+TGG + chr3_2:7739890-7739909 None:intergenic 25.0%
! ACCTTGTCTCAATTTAAAAA+GGG + chr3_2:7739917-7739936 None:intergenic 25.0%
!! GAAGTTTAATTTAACGTTGT+TGG - chr3_2:7740006-7740025 Msa0393650:intron 25.0%
! ACATCAAAGTATAGTACAAA+TGG - chr3_2:7740085-7740104 Msa0393650:intron 25.0%
! AGTTAAAAGAGATGGTAAAA+AGG - chr3_2:7740114-7740133 Msa0393650:intron 25.0%
!! CGTTGGATTATGATTAATTT+TGG + chr3_2:7740466-7740485 None:intergenic 25.0%
! TGATACATCATGAAACATAT+GGG + chr3_2:7740684-7740703 None:intergenic 25.0%
! TTGATACATCATGAAACATA+TGG + chr3_2:7740685-7740704 None:intergenic 25.0%
!!! TCTCTGGTTTTTAGTTTTAT+TGG - chr3_2:7740787-7740806 Msa0393650:intron 25.0%
!! ACTAGAGAGTAATTAATTTG+TGG - chr3_2:7740949-7740968 Msa0393650:intron 25.0%
!!! GGTTTAAATTTTTTCAATGG+AGG - chr3_2:7740981-7741000 Msa0393650:intron 25.0%
!!! TTAATATCGGTGTTGTAAAT+AGG - chr3_2:7741108-7741127 Msa0393650:intron 25.0%
! AGAAGTTGAAAAAAATTAGG+TGG + chr3_2:7741390-7741409 None:intergenic 25.0%
! GAAAGAAGTTGAGAAAAATT+AGG + chr3_2:7741433-7741452 None:intergenic 25.0%
! ATATCAACATTAATTTCCAG+TGG - chr3_2:7741681-7741700 Msa0393650:intron 25.0%
! CATGAAAAATATCTCTTTCA+GGG - chr3_2:7741747-7741766 Msa0393650:intron 25.0%
!! AATAATCATCGCTCATTTTA+GGG + chr3_2:7741853-7741872 None:intergenic 25.0%
!! CTAAGGATCATAAAAGTTTT+AGG + chr3_2:7742075-7742094 None:intergenic 25.0%
!! CTTTTAAATATGAATGGCTA+AGG + chr3_2:7742092-7742111 None:intergenic 25.0%
! CTTAGCCATTCATATTTAAA+AGG - chr3_2:7742090-7742109 Msa0393650:intron 25.0%
! GAATAACCACTTCTATTATT+GGG - chr3_2:7742158-7742177 Msa0393650:intron 25.0%
! TTATTTCCCAATAATAGAAG+TGG + chr3_2:7742167-7742186 None:intergenic 25.0%
! ACATGGTCAAAAGAATTAAA+TGG + chr3_2:7742248-7742267 None:intergenic 25.0%
!! TTAATTCTTTTGACCATGTT+TGG - chr3_2:7742249-7742268 Msa0393650:intron 25.0%
! ACTGCAAATTGAAATGAAAA+TGG + chr3_2:7742326-7742345 None:intergenic 25.0%
! ATACCTTTAACAAGTCATAA+AGG + chr3_2:7742420-7742439 None:intergenic 25.0%
!!! GGATGAGCATATTTTAATAA+AGG - chr3_2:7742513-7742532 Msa0393650:five_prime_UTR 25.0%
!! ATTTGTTTCTCATATGAGAT+CGG - chr3_2:7742547-7742566 Msa0393650:five_prime_UTR 25.0%
ATATTGAGACATGCTTAGTA+TGG - chr3_2:7731695-7731714 Msa0393650:intron 30.0%
ATTCATATAATATGCAGCTG+TGG + chr3_2:7731924-7731943 None:intergenic 30.0%
GCATGATCAAGAAAACTAAA+CGG + chr3_2:7732125-7732144 None:intergenic 30.0%
ACTGCAAATGGAAATGAAAA+TGG + chr3_2:7732210-7732229 None:intergenic 30.0%
TGTGATCACATAATGTTACA+TGG + chr3_2:7732343-7732362 None:intergenic 30.0%
CATTATGTGATCACAATTTC+AGG - chr3_2:7732348-7732367 Msa0393650:intron 30.0%
GAATTGTACAGAGCAAAATA+TGG - chr3_2:7732613-7732632 Msa0393650:intron 30.0%
AGCAAAATATGGTGTTTCAT+TGG - chr3_2:7732624-7732643 Msa0393650:intron 30.0%
AGTCTGATGGTTAAAAATTC+GGG - chr3_2:7732771-7732790 Msa0393650:intron 30.0%
! ATTAGTTTCATCCTTCTCTT+AGG - chr3_2:7732964-7732983 Msa0393650:intron 30.0%
ATGAATGGAGACCATAAATA+TGG + chr3_2:7733004-7733023 None:intergenic 30.0%
ATATTTATGGTCTCCATTCA+TGG - chr3_2:7733003-7733022 Msa0393650:intron 30.0%
TATTTATGGTCTCCATTCAT+GGG - chr3_2:7733004-7733023 Msa0393650:intron 30.0%
ACTAAAGAAATTCCCATGAA+TGG + chr3_2:7733019-7733038 None:intergenic 30.0%
TTCTTGCATTTGGAAATTCA+CGG + chr3_2:7733066-7733085 None:intergenic 30.0%
!! TTATGGTTTGGTATCATTGA+AGG - chr3_2:7733093-7733112 Msa0393650:intron 30.0%
GCTCATTCTCAAAACAAAAA+AGG + chr3_2:7733158-7733177 None:intergenic 30.0%
CAAATAATTAAGGCTATGTG+AGG + chr3_2:7733188-7733207 None:intergenic 30.0%
! CATAGCCTTAATTATTTGTC+TGG - chr3_2:7733190-7733209 Msa0393650:intron 30.0%
AGAAGCCAGACAAATAATTA+AGG + chr3_2:7733198-7733217 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr3_2:7733252-7733271 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr3_2:7733253-7733272 Msa0393650:intron 30.0%
! GTAGTGTGTAGAGTATTAAT+TGG - chr3_2:7733383-7733402 Msa0393650:intron 30.0%
! TGTGTAGAGTATTAATTGGA+GGG - chr3_2:7733387-7733406 Msa0393650:intron 30.0%
!!! GACACTCATTTTAAAACTGA+GGG - chr3_2:7733491-7733510 Msa0393650:intron 30.0%
GACAATTATTATAGGACTCA+TGG - chr3_2:7733683-7733702 Msa0393650:intron 30.0%
! TATCAACTCTTCAATTTTGG+GGG - chr3_2:7733738-7733757 Msa0393650:intron 30.0%
CAGTTAAGATTATTCCAACT+CGG - chr3_2:7733818-7733837 Msa0393650:intron 30.0%
GAAATGAAATATGGTAAGTG+TGG + chr3_2:7734539-7734558 None:intergenic 30.0%
AACTAATAATTGTTCTGGTC+AGG - chr3_2:7734695-7734714 Msa0393650:intron 30.0%
ACTAATAATTGTTCTGGTCA+GGG - chr3_2:7734696-7734715 Msa0393650:intron 30.0%
!! TGCTTGAGTAACACTTTTTA+TGG + chr3_2:7734800-7734819 None:intergenic 30.0%
GTAAACTAGTCACAAAATAG+TGG - chr3_2:7734949-7734968 Msa0393650:intron 30.0%
TCACAAAATAGTGGCATATT+GGG - chr3_2:7734958-7734977 Msa0393650:intron 30.0%
TTGAATATAATTCCAGCTGA+TGG + chr3_2:7735022-7735041 None:intergenic 30.0%
TCAGCTGGAATTATATTCAA+AGG - chr3_2:7735022-7735041 Msa0393650:intron 30.0%
CGTAATAGATGTTTACGATT+TGG - chr3_2:7735206-7735225 Msa0393650:intron 30.0%
GTAGTTGAACTATAATACGA+AGG - chr3_2:7735277-7735296 Msa0393650:intron 30.0%
CAATGTCTTAAACACTAAAC+CGG + chr3_2:7735320-7735339 None:intergenic 30.0%
ATGTAACACACTAACTGATT+TGG + chr3_2:7735391-7735410 None:intergenic 30.0%
AATCAGTTAGTGTGTTACAT+TGG - chr3_2:7735391-7735410 Msa0393650:intron 30.0%
GAAAAGGAGATAAAGTACAT+TGG + chr3_2:7735490-7735509 None:intergenic 30.0%
! ATCATATCATAGTGGAGAAA+AGG + chr3_2:7735506-7735525 None:intergenic 30.0%
ATGTGATGTAAATGCAAAAG+GGG + chr3_2:7735591-7735610 None:intergenic 30.0%
!! CAAATTTGTTGTTTCTCCAA+TGG + chr3_2:7735945-7735964 None:intergenic 30.0%
ACAACAAATTTGCAGCAATT+AGG - chr3_2:7735953-7735972 Msa0393650:intron 30.0%
TACTTATTAGATTCCACACT+TGG + chr3_2:7736032-7736051 None:intergenic 30.0%
TATCGAGTAAACCATCAAAT+TGG - chr3_2:7736137-7736156 Msa0393650:intron 30.0%
TTAAATAAGGACCAGTTTGA+TGG - chr3_2:7736374-7736393 Msa0393650:intron 30.0%
GAGCTAGAAATTAAACTTAG+AGG - chr3_2:7736520-7736539 Msa0393650:intron 30.0%
GCTAGAAATTAAACTTAGAG+GGG - chr3_2:7736522-7736541 Msa0393650:intron 30.0%
CTAGAAATTAAACTTAGAGG+GGG - chr3_2:7736523-7736542 Msa0393650:intron 30.0%
TTTGTTGAACTCTAGTTAGT+TGG + chr3_2:7736861-7736880 None:intergenic 30.0%
ACAACGAAAAATGCAAATGT+AGG - chr3_2:7737002-7737021 Msa0393650:intron 30.0%
TTCGATATGAAATTGCAATG+AGG - chr3_2:7737105-7737124 Msa0393650:intron 30.0%
GCAATGAGGAATCATAAATT+AGG - chr3_2:7737119-7737138 Msa0393650:intron 30.0%
!! TCGTAACCATAGTTTGTTAA+AGG - chr3_2:7737230-7737249 Msa0393650:intron 30.0%
ATTGGACCTTTAACAAACTA+TGG + chr3_2:7737239-7737258 None:intergenic 30.0%
TTATTCAAATCTTGCACTCA+TGG - chr3_2:7737651-7737670 Msa0393650:intron 30.0%
TATTCAAATCTTGCACTCAT+GGG - chr3_2:7737652-7737671 Msa0393650:intron 30.0%
! CAAGACAATATTTCCTTTTG+TGG + chr3_2:7737851-7737870 None:intergenic 30.0%
AATGCTTAAACAATGTCCTA+AGG - chr3_2:7737939-7737958 Msa0393650:intron 30.0%
ATGCTTAAACAATGTCCTAA+GGG - chr3_2:7737940-7737959 Msa0393650:intron 30.0%
TAAATTAAGCAAGAAGAAGG+AGG - chr3_2:7737986-7738005 Msa0393650:intron 30.0%
TTATTCGAATCTTGCATTCA+TGG - chr3_2:7738020-7738039 Msa0393650:intron 30.0%
TATTCGAATCTTGCATTCAT+GGG - chr3_2:7738021-7738040 Msa0393650:intron 30.0%
! GCTTTCACTCTAATTTTGTT+AGG - chr3_2:7738277-7738296 Msa0393650:intron 30.0%
!!! TGAACCAAACATGTTGTTTT+TGG - chr3_2:7738980-7738999 Msa0393650:intron 30.0%
!! CACTGTAGAGAATTGATTTT+GGG - chr3_2:7739019-7739038 Msa0393650:intron 30.0%
!! AAAGATACACAACCGATTTT+CGG + chr3_2:7739139-7739158 None:intergenic 30.0%
TAATTCCTCTAATTCTCGAT+GGG - chr3_2:7739704-7739723 Msa0393650:intron 30.0%
! TTGGTAATCCAAACTTTGTT+AGG - chr3_2:7739736-7739755 Msa0393650:intron 30.0%
GAAGAGTAAAATCCTATCTA+TGG - chr3_2:7739799-7739818 Msa0393650:intron 30.0%
AGTAAAATCCTATCTATGGT+CGG - chr3_2:7739803-7739822 Msa0393650:intron 30.0%
! TCCCTTTTTAAATTGAGACA+AGG - chr3_2:7739913-7739932 Msa0393650:intron 30.0%
CACCTTGTCTCAATTTAAAA+AGG + chr3_2:7739918-7739937 None:intergenic 30.0%
!!! GAGGTTTAGGAAGATTTTTT+TGG - chr3_2:7739965-7739984 Msa0393650:intron 30.0%
!!! GGAAGATTTTTTTGGAGAAA+AGG - chr3_2:7739973-7739992 Msa0393650:intron 30.0%
!!! ATTTTTTTGGAGAAAAGGAG+AGG - chr3_2:7739978-7739997 Msa0393650:intron 30.0%
ATTTAACGTTGTTGGAAAAG+CGG - chr3_2:7740014-7740033 Msa0393650:intron 30.0%
!!! TGGGTATTTGCTTAGTTTTT+TGG - chr3_2:7740206-7740225 Msa0393650:intron 30.0%
GATACATCATGAAACATATG+GGG + chr3_2:7740683-7740702 None:intergenic 30.0%
TTCATGTCATCCAAGATTAA+CGG + chr3_2:7740719-7740738 None:intergenic 30.0%
GGAGCAAAAAAAAGATATAC+CGG + chr3_2:7741309-7741328 None:intergenic 30.0%
ACATTAATTTCCAGTGGAAT+TGG - chr3_2:7741687-7741706 Msa0393650:intron 30.0%
! CCTGAAAGAGATATTTTTCA+TGG + chr3_2:7741749-7741768 None:intergenic 30.0%
CCATGAAAAATATCTCTTTC+AGG - chr3_2:7741746-7741765 Msa0393650:intron 30.0%
! CAATAATCATCGCTCATTTT+AGG + chr3_2:7741854-7741873 None:intergenic 30.0%
TGATGAAAAATCTTACTGCT+AGG - chr3_2:7741904-7741923 Msa0393650:intron 30.0%
! CTTATTTGAGTTCTATCTCA+TGG - chr3_2:7742136-7742155 Msa0393650:intron 30.0%
GGAATAACCACTTCTATTAT+TGG - chr3_2:7742157-7742176 Msa0393650:intron 30.0%
TTTACAGTATTAGGATGTAC+TGG + chr3_2:7742205-7742224 None:intergenic 30.0%
ATCACAAATTTCTTCTTTCG+TGG - chr3_2:7742299-7742318 Msa0393650:intron 30.0%
AACACTATGAAGCACAAGAA+AGG + chr3_2:7731366-7731385 None:intergenic 35.0%
TCAATATCTCATAGCCATCA+TGG + chr3_2:7731682-7731701 None:intergenic 35.0%
CTTAGTGTTTAAACGACTTC+AGG - chr3_2:7731979-7731998 Msa0393650:intron 35.0%
TATATCTATTGCAGGTTTGG+AGG - chr3_2:7732157-7732176 Msa0393650:intron 35.0%
ATTATCAGACGAACTGCAAA+TGG + chr3_2:7732222-7732241 None:intergenic 35.0%
GGACTAAAGAGAATGTAACA+TGG + chr3_2:7732322-7732341 None:intergenic 35.0%
TATGGTGTTTCATTGGAAAG+AGG - chr3_2:7732631-7732650 Msa0393650:intron 35.0%
! AGAGAACTGCAGATTTTGTT+TGG - chr3_2:7732665-7732684 Msa0393650:intron 35.0%
! GTGTGTAGAGTATTAATTGG+AGG - chr3_2:7733386-7733405 Msa0393650:intron 35.0%
!!! CGACACTCATTTTAAAACTG+AGG - chr3_2:7733490-7733509 Msa0393650:intron 35.0%
GTGAAATTTCCAGAATGTGT+TGG - chr3_2:7733937-7733956 Msa0393650:intron 35.0%
TTTATCAAGAATTTGTCCCG+AGG + chr3_2:7734081-7734100 None:intergenic 35.0%
! CTAGCACTGGATTTGATATT+CGG - chr3_2:7734320-7734339 Msa0393650:intron 35.0%
!! CTTTAAAGCCAGACATTCTA+GGG - chr3_2:7734348-7734367 Msa0393650:intron 35.0%
AGAAAAGGATACACTAAGAG+AGG + chr3_2:7734449-7734468 None:intergenic 35.0%
GCAACTTGATAGAATCATTG+TGG + chr3_2:7734499-7734518 None:intergenic 35.0%
ACTTTGAGTGATACTCTTCA+TGG + chr3_2:7734602-7734621 None:intergenic 35.0%
GTCACAAAATAGTGGCATAT+TGG - chr3_2:7734957-7734976 Msa0393650:intron 35.0%
CACAAAATAGTGGCATATTG+GGG - chr3_2:7734959-7734978 Msa0393650:intron 35.0%
! TTGCACTGGAGCATTTATTT+GGG + chr3_2:7734993-7735012 None:intergenic 35.0%
! ATTGCACTGGAGCATTTATT+TGG + chr3_2:7734994-7735013 None:intergenic 35.0%
! TTGTTTGATTTCCACCAAGA+CGG + chr3_2:7735057-7735076 None:intergenic 35.0%
GGAAGAGCTTATCGTTTAAA+TGG - chr3_2:7735163-7735182 Msa0393650:intron 35.0%
CTACTTTAAACCGTCTGAAA+CGG + chr3_2:7735261-7735280 None:intergenic 35.0%
ACTATAATACGAAGGTCTCA+TGG - chr3_2:7735285-7735304 Msa0393650:intron 35.0%
CTATAATACGAAGGTCTCAT+GGG - chr3_2:7735286-7735305 Msa0393650:intron 35.0%
! CGGTTTAGTGTTTAAGACAT+TGG - chr3_2:7735318-7735337 Msa0393650:intron 35.0%
!!! TACGTGTTTTGGTAAACACA+TGG + chr3_2:7735660-7735679 None:intergenic 35.0%
AAGAAGCAATGTTTGATGTG+AGG + chr3_2:7735877-7735896 None:intergenic 35.0%
CACACTATTGTAAACACCAT+TGG - chr3_2:7735926-7735945 Msa0393650:intron 35.0%
AGACACATGAACCAATTTGA+TGG + chr3_2:7736151-7736170 None:intergenic 35.0%
TGTTCAGTAAACCATCAAAC+TGG + chr3_2:7736388-7736407 None:intergenic 35.0%
ACATCACAGTTGTAGGAAAA+AGG - chr3_2:7736448-7736467 Msa0393650:intron 35.0%
!! TTAATTTCTAGCTCCGTTCT+GGG + chr3_2:7736514-7736533 None:intergenic 35.0%
!! TTTAATTTCTAGCTCCGTTC+TGG + chr3_2:7736515-7736534 None:intergenic 35.0%
ACGAAAAATGCAAATGTAGG+AGG - chr3_2:7737005-7737024 Msa0393650:intron 35.0%
TTGTTTAAGGAACCCACAAA+AGG - chr3_2:7737835-7737854 Msa0393650:intron 35.0%
CGATGCAGATATTAATGCAT+CGG + chr3_2:7738141-7738160 None:intergenic 35.0%
!! ATGTTTTTGATGTGATCTCG+AGG - chr3_2:7738232-7738251 Msa0393650:intron 35.0%
AGTTGGTTGTGTTTCTTCTT+TGG - chr3_2:7738255-7738274 Msa0393650:intron 35.0%
AGAATCACATCAAAAGGTTG+CGG + chr3_2:7738312-7738331 None:intergenic 35.0%
TACAAACCTATACACGTTCA+AGG - chr3_2:7738872-7738891 Msa0393650:intron 35.0%
AATTCTCCTTGAACGTGTAT+AGG + chr3_2:7738881-7738900 None:intergenic 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG - chr3_2:7738903-7738922 Msa0393650:intron 35.0%
CTAGCCAAAAACAACATGTT+TGG + chr3_2:7738987-7739006 None:intergenic 35.0%
!! GCACTGTAGAGAATTGATTT+TGG - chr3_2:7739018-7739037 Msa0393650:intron 35.0%
TAGTGACACAAACCGAAAAT+CGG - chr3_2:7739124-7739143 Msa0393650:intron 35.0%
CATCGAGAATTAGAGGAATT+AGG + chr3_2:7739705-7739724 None:intergenic 35.0%
CTAATTCCTCTAATTCTCGA+TGG - chr3_2:7739703-7739722 Msa0393650:intron 35.0%
AGTTAGCTCCTAACAAAGTT+TGG + chr3_2:7739747-7739766 None:intergenic 35.0%
TTTAACGTTGTTGGAAAAGC+GGG - chr3_2:7740015-7740034 Msa0393650:intron 35.0%
!! TAATTAAGGGTGTTTGTCGT+TGG + chr3_2:7740483-7740502 None:intergenic 35.0%
TGTTCGTAGGCAAGAAAATA+AGG - chr3_2:7740619-7740638 Msa0393650:intron 35.0%
TCATGTCATCCAAGATTAAC+GGG + chr3_2:7740718-7740737 None:intergenic 35.0%
ATTGTATGTGAATGCACAAG+TGG - chr3_2:7741250-7741269 Msa0393650:intron 35.0%
GCAAAAAAAAGATATACCGG+CGG + chr3_2:7741306-7741325 None:intergenic 35.0%
GAGAGTTGTGTATAATGCAA+AGG + chr3_2:7741485-7741504 None:intergenic 35.0%
GAAGAGGAAAATTGGTACAA+GGG + chr3_2:7741539-7741558 None:intergenic 35.0%
ATTGATGGGAAGAGGAAAAT+TGG + chr3_2:7741547-7741566 None:intergenic 35.0%
CATCATGGGAAGAAATTGAT+GGG + chr3_2:7741561-7741580 None:intergenic 35.0%
! TTTCTTCCCATGATGGAATT+TGG - chr3_2:7741566-7741585 Msa0393650:intron 35.0%
TTGGAACCAAATTCCATCAT+GGG + chr3_2:7741575-7741594 None:intergenic 35.0%
!! ATCATGATTCTAGCTTGACA+AGG - chr3_2:7741812-7741831 Msa0393650:intron 35.0%
!! TCATGATTCTAGCTTGACAA+GGG - chr3_2:7741813-7741832 Msa0393650:intron 35.0%
AACAATTCTTTCAGGGCTTA+AGG + chr3_2:7741943-7741962 None:intergenic 35.0%
ATTCAGATAATATGCAGCTG+TGG + chr3_2:7742013-7742032 None:intergenic 35.0%
GCAACAAATGTAACCAAACA+TGG + chr3_2:7742265-7742284 None:intergenic 35.0%
! TGTTTGGTTACATTTGTTGC+AGG - chr3_2:7742265-7742284 Msa0393650:intron 35.0%
GTAGCTTGATTGTCTATGTT+TGG - chr3_2:7742365-7742384 Msa0393650:intron 35.0%
!! CGACCTTTATGACTTGTTAA+AGG - chr3_2:7742414-7742433 Msa0393650:intron 35.0%
TGAGAAAGAGATTACTCTGC+TGG + chr3_2:7731437-7731456 None:intergenic 40.0%
!! GAGAGCATAGCACTGTTTTA+TGG - chr3_2:7731956-7731975 Msa0393650:intron 40.0%
TCTGCAGTTCTCTTGTCAAA+TGG + chr3_2:7732658-7732677 None:intergenic 40.0%
!!! ATTTGGTGCACTCTCACTTT+TGG - chr3_2:7732696-7732715 Msa0393650:intron 40.0%
CATAACATATACATGAGCCG+AGG + chr3_2:7732828-7732847 None:intergenic 40.0%
ACCAATTGAGTTAAGCTCAC+AGG - chr3_2:7732858-7732877 Msa0393650:intron 40.0%
CCAATTGAGTTAAGCTCACA+GGG - chr3_2:7732859-7732878 Msa0393650:intron 40.0%
TTCATCCTTCTCTTAGGTGA+TGG - chr3_2:7732970-7732989 Msa0393650:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr3_2:7733248-7733267 None:intergenic 40.0%
!! CTCTTCAATTTTGGGGGAAA+TGG - chr3_2:7733744-7733763 Msa0393650:intron 40.0%
!! ATTTTGGGGGAAATGGACAT+TGG - chr3_2:7733751-7733770 Msa0393650:intron 40.0%
! CACATTCTGGAAATTTCACG+AGG + chr3_2:7733936-7733955 None:intergenic 40.0%
AGAATGTTGCCAACACATTC+TGG + chr3_2:7733949-7733968 None:intergenic 40.0%
! TGTAGGGTTTTTACCTTCCA+TGG - chr3_2:7734291-7734310 Msa0393650:intron 40.0%
! GTAGGGTTTTTACCTTCCAT+GGG - chr3_2:7734292-7734311 Msa0393650:intron 40.0%
!! CCTAGAATGTCTGGCTTTAA+AGG + chr3_2:7734350-7734369 None:intergenic 40.0%
!! CCTTTAAAGCCAGACATTCT+AGG - chr3_2:7734347-7734366 Msa0393650:intron 40.0%
AGCAACAAGAAACACTTCAC+AGG - chr3_2:7735078-7735097 Msa0393650:intron 40.0%
AACACTTCACAGGAAACAAG+TGG - chr3_2:7735088-7735107 Msa0393650:intron 40.0%
CAGTTTCTTTCCGTTTCAGA+CGG - chr3_2:7735248-7735267 Msa0393650:intron 40.0%
TAGATCACTTGAAAGTCTCG+AGG - chr3_2:7735744-7735763 Msa0393650:intron 40.0%
!! GAATACCTAGATTGGGTTGA+TGG + chr3_2:7735775-7735794 None:intergenic 40.0%
ATGTTTGATGTGAGGATGGA+AGG + chr3_2:7735869-7735888 None:intergenic 40.0%
AGCAATGTTTGATGTGAGGA+TGG + chr3_2:7735873-7735892 None:intergenic 40.0%
! CAGCAATTAGGCTAGTTCTT+GGG - chr3_2:7735965-7735984 Msa0393650:intron 40.0%
! TAGATTCCACACTTGGTTTG+TGG + chr3_2:7736025-7736044 None:intergenic 40.0%
GATGCATACATCACAGTTGT+AGG - chr3_2:7736441-7736460 Msa0393650:intron 40.0%
CAAGTGTTTCTTGCTTCAGA+AGG - chr3_2:7736681-7736700 Msa0393650:intron 40.0%
TCTTGCTAACAAGTGTCCTA+AGG - chr3_2:7737809-7737828 Msa0393650:intron 40.0%
CTTGCTAACAAGTGTCCTAA+GGG - chr3_2:7737810-7737829 Msa0393650:intron 40.0%
!! TGTCCTAAGGGCATTGTTTA+AGG - chr3_2:7737822-7737841 Msa0393650:intron 40.0%
GTTCCTTAAACAATGCCCTT+AGG + chr3_2:7737828-7737847 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG + chr3_2:7737958-7737977 None:intergenic 40.0%
CATTAATATCTGCATCGCAC+AGG - chr3_2:7738144-7738163 Msa0393650:intron 40.0%
TGGCTAAGTTGTGAATCACA+TGG - chr3_2:7738399-7738418 Msa0393650:intron 40.0%
AGCTAGGATTTGTAGCTTCA+TGG - chr3_2:7738919-7738938 Msa0393650:intron 40.0%
! GCTTCATGGAGAATTGCTTT+TGG - chr3_2:7738933-7738952 Msa0393650:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG - chr3_2:7738936-7738955 Msa0393650:intron 40.0%
TTATACACTAAGGGCCTGTT+TGG + chr3_2:7739070-7739089 None:intergenic 40.0%
! TCCTTTTGTGATAGCAACCA+TGG - chr3_2:7739098-7739117 Msa0393650:intron 40.0%
ACCATGGTTGCTATCACAAA+AGG + chr3_2:7739102-7739121 None:intergenic 40.0%
! TTTTGTGATAGCAACCATGG+TGG - chr3_2:7739101-7739120 Msa0393650:intron 40.0%
TCTTTCCCATCGAGAATTAG+AGG + chr3_2:7739712-7739731 None:intergenic 40.0%
! TCTCGATGGGAAAGAGATTT+TGG - chr3_2:7739717-7739736 Msa0393650:intron 40.0%
AGACAAGGTGTGTTCGATTA+AGG - chr3_2:7739928-7739947 Msa0393650:intron 40.0%
TGTGTTCGATTAAGGAGTCA+GGG - chr3_2:7739936-7739955 Msa0393650:intron 40.0%
TTGGAGAAAAGGAGAGGTTT+AGG - chr3_2:7739984-7740003 Msa0393650:intron 40.0%
TTAACGTTGTTGGAAAAGCG+GGG - chr3_2:7740016-7740035 Msa0393650:intron 40.0%
TTCGAGACTAATTGTGGATC+AGG - chr3_2:7740039-7740058 Msa0393650:intron 40.0%
TCGAGACTAATTGTGGATCA+GGG - chr3_2:7740040-7740059 Msa0393650:intron 40.0%
GGAAGTCGAGTTAAAAGAGA+TGG - chr3_2:7740106-7740125 Msa0393650:intron 40.0%
!! GAGAAGGTTGTTTTGTGGAA+AGG - chr3_2:7740182-7740201 Msa0393650:intron 40.0%
!! AGGTTGTTTTGTGGAAAGGA+TGG - chr3_2:7740186-7740205 Msa0393650:intron 40.0%
!! GGTTGTTTTGTGGAAAGGAT+GGG - chr3_2:7740187-7740206 Msa0393650:intron 40.0%
TTGTAGTGTCGTATGTTCGT+AGG - chr3_2:7740606-7740625 Msa0393650:intron 40.0%
CATGAAACATATGGGGACTA+GGG + chr3_2:7740676-7740695 None:intergenic 40.0%
TCATGAAACATATGGGGACT+AGG + chr3_2:7740677-7740696 None:intergenic 40.0%
TCCTTTGTACCCGTTAATCT+TGG - chr3_2:7740706-7740725 Msa0393650:intron 40.0%
! TCCAAGATTAACGGGTACAA+AGG + chr3_2:7740710-7740729 None:intergenic 40.0%
!! ATGCAAATGTCTTTTTGGGC+TGG - chr3_2:7740763-7740782 Msa0393650:intron 40.0%
! GGAGGTCTCTAAAAAAACTG+AGG - chr3_2:7740999-7741018 Msa0393650:intron 40.0%
! AGGTGAGGTTTTTGTATGTG+CGG - chr3_2:7741204-7741223 Msa0393650:intron 40.0%
AATTGTGACATGTGTCCATG+TGG + chr3_2:7741233-7741252 None:intergenic 40.0%
!!! TTTTTTTGCTCCATTACCCG+AGG - chr3_2:7741317-7741336 Msa0393650:intron 40.0%
!!! TTTTTTGCTCCATTACCCGA+GGG - chr3_2:7741318-7741337 Msa0393650:intron 40.0%
AAGGATAAAAGACCAACCCT+CGG + chr3_2:7741337-7741356 None:intergenic 40.0%
AGGAAAATTGGTACAAGGGT+GGG + chr3_2:7741535-7741554 None:intergenic 40.0%
GGAAGAGGAAAATTGGTACA+AGG + chr3_2:7741540-7741559 None:intergenic 40.0%
CCATCATGGGAAGAAATTGA+TGG + chr3_2:7741562-7741581 None:intergenic 40.0%
CCATCAATTTCTTCCCATGA+TGG - chr3_2:7741559-7741578 Msa0393650:intron 40.0%
GTTGGAACCAAATTCCATCA+TGG + chr3_2:7741576-7741595 None:intergenic 40.0%
! ATGGAATTTGGTTCCAACCT+TGG - chr3_2:7741578-7741597 Msa0393650:intron 40.0%
AATACAGACACCAATTCCAC+TGG + chr3_2:7741700-7741719 None:intergenic 40.0%
TCTCTTTCAGGGCTTAAAGT+TGG - chr3_2:7741758-7741777 Msa0393650:intron 40.0%
GGTATTATTCTACCTAGCAG+TGG - chr3_2:7741779-7741798 Msa0393650:intron 40.0%
!! CATGATTCTAGCTTGACAAG+GGG - chr3_2:7741814-7741833 Msa0393650:intron 40.0%
!! TCATCGCTCATTTTAGGGAT+CGG + chr3_2:7741848-7741867 None:intergenic 40.0%
! AATCCAGTGAGCAAGACTTT+TGG - chr3_2:7741970-7741989 Msa0393650:CDS 40.0%
! GGTTACATTTGTTGCAGGTT+TGG - chr3_2:7742270-7742289 Msa0393650:intron 40.0%
! TACATTTGTTGCAGGTTTGG+AGG - chr3_2:7742273-7742292 Msa0393650:intron 40.0%
TTCGTGCATCTGGAAATTCA+CGG + chr3_2:7742393-7742412 None:intergenic 40.0%
ACTCCAAAAGTCTTGCTCAC+TGG + chr3_2:7731887-7731906 None:intergenic 45.0%
!! AGTGAGCAAGACTTTTGGAG+TGG - chr3_2:7731886-7731905 Msa0393650:CDS 45.0%
CCCTGTGAGCTTAACTCAAT+TGG + chr3_2:7732862-7732881 None:intergenic 45.0%
TGGCTGCTGTGCCATATTTA+TGG - chr3_2:7732990-7733009 Msa0393650:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr3_2:7733249-7733268 None:intergenic 45.0%
TGGGTCAAGATTATCCGAGT+TGG + chr3_2:7733835-7733854 None:intergenic 45.0%
!!! AACCACGATGCCGTTTTTTC+CGG - chr3_2:7734024-7734043 Msa0393650:intron 45.0%
AATCACAATTCATGCTGGCC+CGG + chr3_2:7734046-7734065 None:intergenic 45.0%
GGACCAATCACAATTCATGC+TGG + chr3_2:7734051-7734070 None:intergenic 45.0%
! TGATTGGTCCAACAAAGCCT+CGG - chr3_2:7734061-7734080 Msa0393650:intron 45.0%
! AATTTGTCCCGAGGCTTTGT+TGG + chr3_2:7734072-7734091 None:intergenic 45.0%
! AAAGCCAGACATTCTAGGGA+TGG - chr3_2:7734352-7734371 Msa0393650:intron 45.0%
TTGAACTTTCCACCAGCAAG+AGG + chr3_2:7734416-7734435 None:intergenic 45.0%
TCACTTCTCCCGAAAATCAG+AGG + chr3_2:7734655-7734674 None:intergenic 45.0%
TTCTGGTCAGGGTTCAAACT+CGG - chr3_2:7734707-7734726 Msa0393650:intron 45.0%
ATAGTGGCATATTGGGGAGA+AGG - chr3_2:7734965-7734984 Msa0393650:intron 45.0%
!! GCTGATGGATTAGATTGCAC+TGG + chr3_2:7735007-7735026 None:intergenic 45.0%
GTGCAATCTAATCCATCAGC+TGG - chr3_2:7735007-7735026 Msa0393650:intron 45.0%
AAAGGAAGAAGCAACCGTCT+TGG - chr3_2:7735040-7735059 Msa0393650:intron 45.0%
!!! GGTGATGGAATTGCTTTTCG+TGG - chr3_2:7735142-7735161 Msa0393650:intron 45.0%
CAAGACCATCAACCCAATCT+AGG - chr3_2:7735767-7735786 Msa0393650:intron 45.0%
ATGGAAGGTCGAAGAAGAAG+GGG + chr3_2:7735854-7735873 None:intergenic 45.0%
GATGGAAGGTCGAAGAAGAA+GGG + chr3_2:7735855-7735874 None:intergenic 45.0%
! GCAGCAATTAGGCTAGTTCT+TGG - chr3_2:7735964-7735983 Msa0393650:intron 45.0%
! TGTGGTTGAGGATGGATTTG+TGG + chr3_2:7736007-7736026 None:intergenic 45.0%
!! ACTTGGTTTGTGGTTGAGGA+TGG + chr3_2:7736015-7736034 None:intergenic 45.0%
CAAGTGACCATATCCCAGAA+CGG - chr3_2:7736498-7736517 Msa0393650:intron 45.0%
AATCGTGTCCAGTGAATCGT+TGG - chr3_2:7737043-7737062 Msa0393650:intron 45.0%
GCGAACAAAATCAGCGATAG+TGG - chr3_2:7737082-7737101 Msa0393650:intron 45.0%
TTGATGTGATCTCGAGGAGT+TGG - chr3_2:7738238-7738257 Msa0393650:intron 45.0%
TCTCAGAAGCCAAACCAAAC+AGG - chr3_2:7739053-7739072 Msa0393650:intron 45.0%
GTGTGTTCGATTAAGGAGTC+AGG - chr3_2:7739935-7739954 Msa0393650:intron 45.0%
GTGTTCGATTAAGGAGTCAG+GGG - chr3_2:7739937-7739956 Msa0393650:intron 45.0%
TGTTCGATTAAGGAGTCAGG+GGG - chr3_2:7739938-7739957 Msa0393650:intron 45.0%
AGACTAATTGTGGATCAGGG+AGG - chr3_2:7740043-7740062 Msa0393650:intron 45.0%
TTGTGGATCAGGGAGGATTA+TGG - chr3_2:7740050-7740069 Msa0393650:intron 45.0%
!! ATGGTAAAAAGGCGTCACTC+TGG - chr3_2:7740125-7740144 Msa0393650:intron 45.0%
! CTTAGCGAGGGTGTAAAAGA+TGG - chr3_2:7740157-7740176 Msa0393650:intron 45.0%
!! GGTGTAAAAGATGGTGGAGA+AGG - chr3_2:7740166-7740185 Msa0393650:intron 45.0%
!! TGGTGGAGAAGGTTGTTTTG+TGG - chr3_2:7740177-7740196 Msa0393650:intron 45.0%
! GAGAGTGTGTGAGACACAAA+AGG - chr3_2:7741184-7741203 Msa0393650:intron 45.0%
TGTGTGAGACACAAAAGGTG+AGG - chr3_2:7741189-7741208 Msa0393650:intron 45.0%
! GGTGAGGTTTTTGTATGTGC+GGG - chr3_2:7741205-7741224 Msa0393650:intron 45.0%
! GTGAGGTTTTTGTATGTGCG+GGG - chr3_2:7741206-7741225 Msa0393650:intron 45.0%
CAAGTGGTACATGTCACCTA+AGG - chr3_2:7741266-7741285 Msa0393650:CDS 45.0%
GGTGATACATAGACCACCTT+AGG + chr3_2:7741285-7741304 None:intergenic 45.0%
AGGATAAAAGACCAACCCTC+GGG + chr3_2:7741336-7741355 None:intergenic 45.0%
AAAATTGGTACAAGGGTGGG+AGG + chr3_2:7741532-7741551 None:intergenic 45.0%
GAGGAAAATTGGTACAAGGG+TGG + chr3_2:7741536-7741555 None:intergenic 45.0%
GGGAAGAAATTGATGGGAAG+AGG + chr3_2:7741555-7741574 None:intergenic 45.0%
CATTCTGCTACAACCAAGGT+TGG + chr3_2:7741594-7741613 None:intergenic 45.0%
AGTGCATTCTGCTACAACCA+AGG + chr3_2:7741598-7741617 None:intergenic 45.0%
ATTCTTTCAGGGCTTAAGGC+TGG + chr3_2:7741939-7741958 None:intergenic 45.0%
ACTCCAAAAGTCTTGCTCAC+TGG + chr3_2:7731887-7731906 None:intergenic 45.0%
!! AGTGAGCAAGACTTTTGGAG+TGG - chr3_2:7731886-7731905 Msa0393650:CDS 45.0%
!! TAAAGGTCGATTCGTGCATC+TGG + chr3_2:7742403-7742422 None:intergenic 45.0%
!! TTCATATAATAAAAAATATA+TGG + chr3_2:7731795-7731814 None:intergenic 5.0%
!!! ATTTAAAAATACATTTTATA+TGG - chr3_2:7738334-7738353 Msa0393650:intron 5.0%
CCAAAAGTCTTGCTCACTGG+AGG + chr3_2:7731884-7731903 None:intergenic 50.0%
! CCTCCAGTGAGCAAGACTTT+TGG - chr3_2:7731881-7731900 Msa0393650:CDS 50.0%
AGTGTCCGGGATTCAAACCT+CGG - chr3_2:7732808-7732827 Msa0393650:intron 50.0%
ATGAGCCGAGGTTTGAATCC+CGG + chr3_2:7732816-7732835 None:intergenic 50.0%
AGCAGCCATCACCTAAGAGA+AGG + chr3_2:7732978-7732997 None:intergenic 50.0%
GGAAAATGCTGGATAACGCG+AGG - chr3_2:7733905-7733924 Msa0393650:intron 50.0%
AAATGCTGGATAACGCGAGG+TGG - chr3_2:7733908-7733927 Msa0393650:intron 50.0%
!!! ACCACGATGCCGTTTTTTCC+GGG - chr3_2:7734025-7734044 Msa0393650:intron 50.0%
TCATGCTGGCCCGGAAAAAA+CGG + chr3_2:7734037-7734056 None:intergenic 50.0%
GGGCCAGCATGAATTGTGAT+TGG - chr3_2:7734045-7734064 Msa0393650:intron 50.0%
! GATTGGTCCAACAAAGCCTC+GGG - chr3_2:7734062-7734081 Msa0393650:intron 50.0%
GCAACCATCCCTAGAATGTC+TGG + chr3_2:7734359-7734378 None:intergenic 50.0%
! GACATTCTAGGGATGGTTGC+AGG - chr3_2:7734359-7734378 Msa0393650:intron 50.0%
ACAGTGCTTCATCCTCTTGC+TGG - chr3_2:7734401-7734420 Msa0393650:intron 50.0%
TCTGGTCAGGGTTCAAACTC+GGG - chr3_2:7734708-7734727 Msa0393650:intron 50.0%
TTCCCCTCAGCAGCAAAATC+AGG - chr3_2:7735120-7735139 Msa0393650:intron 50.0%
TCCCCTCAGCAGCAAAATCA+GGG - chr3_2:7735121-7735140 Msa0393650:intron 50.0%
! ACCCTGATTTTGCTGCTGAG+GGG + chr3_2:7735125-7735144 None:intergenic 50.0%
! CACCCTGATTTTGCTGCTGA+GGG + chr3_2:7735126-7735145 None:intergenic 50.0%
! TCACCCTGATTTTGCTGCTG+AGG + chr3_2:7735127-7735146 None:intergenic 50.0%
CAGCAGCAAAATCAGGGTGA+TGG - chr3_2:7735127-7735146 Msa0393650:intron 50.0%
GGATGGAAGGTCGAAGAAGA+AGG + chr3_2:7735856-7735875 None:intergenic 50.0%
!! CCACACTTGGTTTGTGGTTG+AGG + chr3_2:7736019-7736038 None:intergenic 50.0%
CCTCAACCACAAACCAAGTG+TGG - chr3_2:7736016-7736035 Msa0393650:intron 50.0%
!! TCTAGCTCCGTTCTGGGATA+TGG + chr3_2:7736508-7736527 None:intergenic 50.0%
! GTCCAGTGAATCGTTGGTAG+TGG - chr3_2:7737049-7737068 Msa0393650:intron 50.0%
AGCCACTACCAACGATTCAC+TGG + chr3_2:7737054-7737073 None:intergenic 50.0%
CACTAAGGGCCTGTTTGGTT+TGG + chr3_2:7739065-7739084 None:intergenic 50.0%
! GGTTTGTGTCACTACCACCA+TGG + chr3_2:7739118-7739137 None:intergenic 50.0%
AGCGCAAACCGACCATAGAT+AGG + chr3_2:7739814-7739833 None:intergenic 50.0%
GATTAAGGAGTCAGGGGGTT+AGG - chr3_2:7739943-7739962 Msa0393650:intron 50.0%
!! GTAAAAAGGCGTCACTCTGG+TGG - chr3_2:7740128-7740147 Msa0393650:intron 50.0%
TGGTGGAAGGATCTTAGCGA+GGG - chr3_2:7740145-7740164 Msa0393650:intron 50.0%
! AGCGAGGGTGTAAAAGATGG+TGG - chr3_2:7740160-7740179 Msa0393650:intron 50.0%
!!! GTCTTTTTGGGCTGGTTCTC+TGG - chr3_2:7740771-7740790 Msa0393650:intron 50.0%
CACACACTCTCACATGAGAG+TGG + chr3_2:7741175-7741194 None:intergenic 50.0%
GTGGTACATGTCACCTAAGG+TGG - chr3_2:7741269-7741288 Msa0393650:CDS 50.0%
AAAGACCAACCCTCGGGTAA+TGG + chr3_2:7741330-7741349 None:intergenic 50.0%
GGTGTCTGTATTCCACAGCT+AGG - chr3_2:7741708-7741727 Msa0393650:CDS 50.0%
TTCTACCTAGCAGTGGCTTG+AGG - chr3_2:7741786-7741805 Msa0393650:intron 50.0%
ATTGACCTCAAGCCACTGCT+AGG + chr3_2:7741794-7741813 None:intergenic 50.0%
TGCAGAGAGCAAACGACTTC+AGG - chr3_2:7742041-7742060 Msa0393650:CDS 50.0%
GTGCTAGCATAGCCCATGGA+AGG + chr3_2:7734307-7734326 None:intergenic 55.0%
! TCCATGGGCTATGCTAGCAC+TGG - chr3_2:7734307-7734326 Msa0393650:intron 55.0%
TCCAGTGCTAGCATAGCCCA+TGG + chr3_2:7734311-7734330 None:intergenic 55.0%
GTGCTTCATCCTCTTGCTGG+TGG - chr3_2:7734404-7734423 Msa0393650:intron 55.0%
GGAAGAAGCAACCGTCTTGG+TGG - chr3_2:7735043-7735062 Msa0393650:intron 55.0%
!! GGTCTCATGGGCTAGATGTC+CGG - chr3_2:7735298-7735317 Msa0393650:intron 55.0%
TAAGGAGTCAGGGGGTTAGG+AGG - chr3_2:7739946-7739965 Msa0393650:intron 55.0%
GTCAGGGGGTTAGGAGGTTT+AGG - chr3_2:7739952-7739971 Msa0393650:intron 55.0%
GCGGGGTTCGAGACTAATTG+TGG - chr3_2:7740033-7740052 Msa0393650:intron 55.0%
!! AAAGGCGTCACTCTGGTGGA+AGG - chr3_2:7740132-7740151 Msa0393650:intron 55.0%
CTGGTGGAAGGATCTTAGCG+AGG - chr3_2:7740144-7740163 Msa0393650:intron 55.0%
TTGTATGTGCGGGGACCACA+TGG - chr3_2:7741215-7741234 Msa0393650:intron 55.0%
GGTGGTCTATGTATCACCGC+CGG - chr3_2:7741287-7741306 Msa0393650:CDS 55.0%
TTGCTCCATTACCCGAGGGT+TGG - chr3_2:7741322-7741341 Msa0393650:intron 55.0%
GGTACAAGGGTGGGAGGATA+CGG + chr3_2:7741526-7741545 None:intergenic 55.0%
ACGCATTTGCAGCCTAGCTG+TGG + chr3_2:7741723-7741742 None:intergenic 55.0%
GCCCGGAAAAAACGGCATCG+TGG + chr3_2:7734029-7734048 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 7731361 7742572 7731361 ID=Msa0393650;Name=Msa0393650
chr3_2 mRNA 7731361 7742572 7731361 ID=Msa0393650-mRNA-1;Parent=Msa0393650;Name=Msa0393650-mRNA-1;_AED=0.20;_eAED=0.20;_QI=64|0.57|0.75|1|0.57|0.75|8|128|276
chr3_2 exon 7731361 7731646 7731361 ID=Msa0393650-mRNA-1:exon:2029;Parent=Msa0393650-mRNA-1
chr3_2 exon 7731867 7731964 7731867 ID=Msa0393650-mRNA-1:exon:2028;Parent=Msa0393650-mRNA-1
chr3_2 exon 7739477 7739637 7739477 ID=Msa0393650-mRNA-1:exon:2027;Parent=Msa0393650-mRNA-1
chr3_2 exon 7740819 7740947 7740819 ID=Msa0393650-mRNA-1:exon:2026;Parent=Msa0393650-mRNA-1
chr3_2 exon 7741252 7741309 7741252 ID=Msa0393650-mRNA-1:exon:2025;Parent=Msa0393650-mRNA-1
chr3_2 exon 7741689 7741762 7741689 ID=Msa0393650-mRNA-1:exon:2024;Parent=Msa0393650-mRNA-1
chr3_2 exon 7741933 7742068 7741933 ID=Msa0393650-mRNA-1:exon:2023;Parent=Msa0393650-mRNA-1
chr3_2 exon 7742492 7742572 7742492 ID=Msa0393650-mRNA-1:exon:2022;Parent=Msa0393650-mRNA-1
chr3_2 five_prime_UTR 7742509 7742572 7742509 ID=Msa0393650-mRNA-1:five_prime_utr;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7742492 7742508 7742492 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7741933 7742068 7741933 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7741689 7741762 7741689 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7741252 7741309 7741252 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7740819 7740947 7740819 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7739477 7739637 7739477 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7731867 7731964 7731867 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 CDS 7731489 7731646 7731489 ID=Msa0393650-mRNA-1:cds;Parent=Msa0393650-mRNA-1
chr3_2 three_prime_UTR 7731361 7731488 7731361 ID=Msa0393650-mRNA-1:three_prime_utr;Parent=Msa0393650-mRNA-1
Gene Sequence

>Msa0393650

ATGTCTACACCAGCAGAATACTTCTGGTCTTTACCTCCAGTGAGCAAGACTTTTGGAGTGGCATGTTTCATGACCACAGCTGCATATTATATGAATCTTTATGATGCAGAGAGCATAGCACTGTTTTATGGCTTAGTGTTTAAACGACTTCAGGTTTGGAGGCTTATCACAAATTTCTTCTTTCTTGGACCATTTTCATTTCCATTTGCAGTTCGTCTGATAATGATAGCAAAATATGGTGTTTCATTGGAAAGAGGTCCATTTGACAAGAGAACTGCAGATTTTGTGATGGCTGCTGTGCCATATTTATGGTCTCCATTCATGGGAATTTCTTTAGTTTTCATGATTGTCTATGTTTGGAGCCGTGAATTTCCAAATGCAAGAATCAACATTTATGGTTTGGTATCATTGAAGGGTTTTTACCTTCCATGGGCTATGCTAGCACTGGATTTGATATTCGGAAATCCTTTAAAGCCAGACATTCTAGGGATGGTTGCAGGACACTTATATTACTTCTTAACAGTGCTTCATCCTCTTGCTGGTGGAAAGTTCAAGTTCAATACTCCTCTCTTAGTTAATCCAGTGAGCAAGACTTTTGGAGTGGCATGTTTAATGACCACAGCTGCATATTATCTGAATCTTTATGATGCAGAGAGCAAACGACTTCAGGTTTGTTTGGAGGCTTATCACAAATTTCTTCTTTCGTGGACCATTTTCATTTCAATTTGCAGTTTGTCTGATAATGATGTAAGTAGCTTGATTGTCTATGTTTGGAGCCGTGAATTTCCAGATGCACGAATCGACCTTTATGACTTGTTAAAGGTATGTTGA

Protein sequence

>Msa0393650

MSTPAEYFWSLPPVSKTFGVACFMTTAAYYMNLYDAESIALFYGLVFKRLQVWRLITNFFFLGPFSFPFAVRLIMIAKYGVSLERGPFDKRTADFVMAAVPYLWSPFMGISLVFMIVYVWSREFPNARINIYGLVSLKGFYLPWAMLALDLIFGNPLKPDILGMVAGHLYYFLTVLHPLAGGKFKFNTPLLVNPVSKTFGVACLMTTAAYYLNLYDAESKRLQVCLEAYHKFLLSWTIFISICSLSDNDVSSLIVYVWSREFPDARIDLYDLLKVC*