Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0858390 | XP_003616622.1 | 89.922 | 129 | 3 | 1 | 1 | 119 | 1 | 129 | 3.30e-78 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0858390 | sp|P59234|YIPL_SOLTU | 70.312 | 128 | 28 | 1 | 1 | 118 | 1 | 128 | 1.84e-60 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0858390 | G7KGZ8 | 89.922 | 129 | 3 | 1 | 1 | 119 | 1 | 129 | 1.58e-78 | 236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022550 | Msa0858390 | 0.811228 | 7.777299e-51 | -8.615850e-47 |
| Msa0024400 | Msa0858390 | 0.805239 | 1.469684e-49 | -8.615850e-47 |
| Msa0026910 | Msa0858390 | 0.816574 | 5.156226e-52 | -8.615850e-47 |
| Msa0032080 | Msa0858390 | 0.819037 | 1.433009e-52 | -8.615850e-47 |
| Msa0032470 | Msa0858390 | 0.848418 | 6.208226e-60 | -8.615850e-47 |
| Msa0043980 | Msa0858390 | 0.836733 | 7.872610e-57 | -8.615850e-47 |
| Msa0044260 | Msa0858390 | 0.801303 | 9.596767e-49 | -8.615850e-47 |
| Msa0045790 | Msa0858390 | 0.825835 | 3.775182e-54 | -8.615850e-47 |
| Msa0046160 | Msa0858390 | 0.829811 | 4.177956e-55 | -8.615850e-47 |
| Msa0051020 | Msa0858390 | 0.800699 | 1.275097e-48 | -8.615850e-47 |
| Msa0051740 | Msa0858390 | 0.811542 | 6.645395e-51 | -8.615850e-47 |
| Msa0060730 | Msa0858390 | -0.823521 | 1.324636e-53 | -8.615850e-47 |
| Msa0075360 | Msa0858390 | 0.814138 | 1.794705e-51 | -8.615850e-47 |
| Msa0076290 | Msa0858390 | 0.822458 | 2.343706e-53 | -8.615850e-47 |
| Msa0079070 | Msa0858390 | 0.829463 | 5.076031e-55 | -8.615850e-47 |
| Msa0080490 | Msa0858390 | 0.822754 | 2.000191e-53 | -8.615850e-47 |
| Msa0081780 | Msa0858390 | 0.820709 | 5.941994e-53 | -8.615850e-47 |
| Msa0083280 | Msa0858390 | 0.823847 | 1.111010e-53 | -8.615850e-47 |
| Msa0089750 | Msa0858390 | 0.803752 | 2.999876e-49 | -8.615850e-47 |
| Msa0090360 | Msa0858390 | 0.806657 | 7.396444e-50 | -8.615850e-47 |
| Msa0101270 | Msa0858390 | 0.803871 | 2.833884e-49 | -8.615850e-47 |
| Msa0115790 | Msa0858390 | 0.827109 | 1.875672e-54 | -8.615850e-47 |
| Msa0610250 | Msa0858390 | 0.804464 | 2.133346e-49 | -8.615850e-47 |
| Msa0618970 | Msa0858390 | 0.814601 | 1.417562e-51 | -8.615850e-47 |
| Msa0620230 | Msa0858390 | 0.812030 | 5.205236e-51 | -8.615850e-47 |
| Msa0623990 | Msa0858390 | 0.808827 | 2.558016e-50 | -8.615850e-47 |
| Msa0624060 | Msa0858390 | 0.833904 | 4.079374e-56 | -8.615850e-47 |
| Msa0642730 | Msa0858390 | 0.804962 | 1.679579e-49 | -8.615850e-47 |
| Msa0654310 | Msa0858390 | 0.814551 | 1.454427e-51 | -8.615850e-47 |
| Msa0662340 | Msa0858390 | 0.802659 | 5.051370e-49 | -8.615850e-47 |
| Msa0667770 | Msa0858390 | 0.830625 | 2.642311e-55 | -8.615850e-47 |
| Msa0667790 | Msa0858390 | 0.848964 | 4.379658e-60 | -8.615850e-47 |
| Msa0673120 | Msa0858390 | 0.805823 | 1.108256e-49 | -8.615850e-47 |
| Msa0676130 | Msa0858390 | 0.835147 | 1.987412e-56 | -8.615850e-47 |
| Msa0676180 | Msa0858390 | 0.836609 | 8.464043e-57 | -8.615850e-47 |
| Msa0683980 | Msa0858390 | 0.801362 | 9.332644e-49 | -8.615850e-47 |
| Msa0689250 | Msa0858390 | 0.843854 | 1.084820e-58 | -8.615850e-47 |
| Msa0692980 | Msa0858390 | 0.812343 | 4.446554e-51 | -8.615850e-47 |
| Msa0695880 | Msa0858390 | 0.813285 | 2.765175e-51 | -8.615850e-47 |
| Msa0711450 | Msa0858390 | 0.822688 | 2.071635e-53 | -8.615850e-47 |
| Msa0740510 | Msa0858390 | 0.822434 | 2.373812e-53 | -8.615850e-47 |
| Msa0741440 | Msa0858390 | 0.845313 | 4.389393e-59 | -8.615850e-47 |
| Msa0758260 | Msa0858390 | 0.800809 | 1.210748e-48 | -8.615850e-47 |
| Msa0760180 | Msa0858390 | 0.807047 | 6.115558e-50 | -8.615850e-47 |
| Msa0760250 | Msa0858390 | 0.806360 | 8.543306e-50 | -8.615850e-47 |
| Msa0784480 | Msa0858390 | 0.894482 | 2.365513e-75 | -8.615850e-47 |
| Msa0786750 | Msa0858390 | 0.826574 | 2.517882e-54 | -8.615850e-47 |
| Msa0796250 | Msa0858390 | 0.814106 | 1.823655e-51 | -8.615850e-47 |
| Msa0818060 | Msa0858390 | 0.905022 | 6.657408e-80 | -8.615850e-47 |
| Msa0820770 | Msa0858390 | 0.825468 | 4.611194e-54 | -8.615850e-47 |
| Msa0822500 | Msa0858390 | 0.840541 | 8.171040e-58 | -8.615850e-47 |
| Msa0831110 | Msa0858390 | 0.836833 | 7.420246e-57 | -8.615850e-47 |
| Msa0832150 | Msa0858390 | 0.808577 | 2.892724e-50 | -8.615850e-47 |
| Msa0832340 | Msa0858390 | 0.807149 | 5.819806e-50 | -8.615850e-47 |
| Msa0833530 | Msa0858390 | 0.808885 | 2.486060e-50 | -8.615850e-47 |
| Msa0837890 | Msa0858390 | 0.805022 | 1.631395e-49 | -8.615850e-47 |
| Msa0127650 | Msa0858390 | 0.802771 | 4.788775e-49 | -8.615850e-47 |
| Msa0138020 | Msa0858390 | 0.826963 | 2.032843e-54 | -8.615850e-47 |
| Msa0148080 | Msa0858390 | 0.810377 | 1.188027e-50 | -8.615850e-47 |
| Msa0154840 | Msa0858390 | -0.806652 | 7.414582e-50 | -8.615850e-47 |
| Msa0160960 | Msa0858390 | 0.801856 | 7.390309e-49 | -8.615850e-47 |
| Msa0163510 | Msa0858390 | 0.813512 | 2.465491e-51 | -8.615850e-47 |
| Msa0175540 | Msa0858390 | 0.805177 | 1.514341e-49 | -8.615850e-47 |
| Msa0184040 | Msa0858390 | 0.801657 | 8.120828e-49 | -8.615850e-47 |
| Msa0186950 | Msa0858390 | 0.806839 | 6.767726e-50 | -8.615850e-47 |
| Msa0189040 | Msa0858390 | 0.806221 | 9.139390e-50 | -8.615850e-47 |
| Msa0194080 | Msa0858390 | 0.805289 | 1.434408e-49 | -8.615850e-47 |
| Msa0204770 | Msa0858390 | 0.805153 | 1.531630e-49 | -8.615850e-47 |
| Msa0207040 | Msa0858390 | -0.818708 | 1.702019e-52 | -8.615850e-47 |
| Msa0211150 | Msa0858390 | 0.820089 | 8.246088e-53 | -8.615850e-47 |
| Msa0219590 | Msa0858390 | 0.848235 | 6.973644e-60 | -8.615850e-47 |
| Msa0221470 | Msa0858390 | 0.806106 | 9.661558e-50 | -8.615850e-47 |
| Msa0221500 | Msa0858390 | 0.800097 | 1.690545e-48 | -8.615850e-47 |
| Msa0237420 | Msa0858390 | 0.806999 | 6.260630e-50 | -8.615850e-47 |
| Msa0369950 | Msa0858390 | 0.810594 | 1.066667e-50 | -8.615850e-47 |
| Msa0376630 | Msa0858390 | 0.823265 | 1.520061e-53 | -8.615850e-47 |
| Msa0392440 | Msa0858390 | 0.800165 | 1.637556e-48 | -8.615850e-47 |
| Msa0395750 | Msa0858390 | 0.810358 | 1.199232e-50 | -8.615850e-47 |
| Msa0398670 | Msa0858390 | 0.805066 | 1.597124e-49 | -8.615850e-47 |
| Msa0416510 | Msa0858390 | 0.832822 | 7.591036e-56 | -8.615850e-47 |
| Msa0417330 | Msa0858390 | 0.803666 | 3.127096e-49 | -8.615850e-47 |
| Msa0428580 | Msa0858390 | 0.813538 | 2.432690e-51 | -8.615850e-47 |
| Msa0432160 | Msa0858390 | 0.814153 | 1.780971e-51 | -8.615850e-47 |
| Msa0437270 | Msa0858390 | 0.803701 | 3.074840e-49 | -8.615850e-47 |
| Msa0468270 | Msa0858390 | 0.829890 | 3.996089e-55 | -8.615850e-47 |
| Msa0471670 | Msa0858390 | 0.818148 | 2.279859e-52 | -8.615850e-47 |
| Msa0474940 | Msa0858390 | 0.804429 | 2.169763e-49 | -8.615850e-47 |
| Msa0476680 | Msa0858390 | 0.811585 | 6.504493e-51 | -8.615850e-47 |
| Msa0479170 | Msa0858390 | 0.810161 | 1.322967e-50 | -8.615850e-47 |
| Msa0240900 | Msa0858390 | 0.811299 | 7.504273e-51 | -8.615850e-47 |
| Msa0240920 | Msa0858390 | 0.801066 | 1.073041e-48 | -8.615850e-47 |
| Msa0241140 | Msa0858390 | 0.821521 | 3.863494e-53 | -8.615850e-47 |
| Msa0254790 | Msa0858390 | 0.810274 | 1.250324e-50 | -8.615850e-47 |
| Msa0261090 | Msa0858390 | 0.825651 | 4.174071e-54 | -8.615850e-47 |
| Msa0267920 | Msa0858390 | 0.810447 | 1.147438e-50 | -8.615850e-47 |
| Msa0270580 | Msa0858390 | 0.831350 | 1.754648e-55 | -8.615850e-47 |
| Msa0271510 | Msa0858390 | 0.800776 | 1.229527e-48 | -8.615850e-47 |
| Msa0274980 | Msa0858390 | 0.804742 | 1.866331e-49 | -8.615850e-47 |
| Msa0278580 | Msa0858390 | 0.812046 | 5.161457e-51 | -8.615850e-47 |
| Msa0287870 | Msa0858390 | 0.813381 | 2.634487e-51 | -8.615850e-47 |
| Msa0315690 | Msa0858390 | 0.808579 | 2.890173e-50 | -8.615850e-47 |
| Msa0316390 | Msa0858390 | 0.801823 | 7.507255e-49 | -8.615850e-47 |
| Msa0317970 | Msa0858390 | 0.808625 | 2.824695e-50 | -8.615850e-47 |
| Msa0318680 | Msa0858390 | 0.849652 | 2.818090e-60 | -8.615850e-47 |
| Msa0321620 | Msa0858390 | 0.805066 | 1.597215e-49 | -8.615850e-47 |
| Msa0349470 | Msa0858390 | 0.809828 | 1.560079e-50 | -8.615850e-47 |
| Msa0363790 | Msa0858390 | 0.832264 | 1.043854e-55 | -8.615850e-47 |
| Msa0509700 | Msa0858390 | 0.816016 | 6.873442e-52 | -8.615850e-47 |
| Msa0518380 | Msa0858390 | 0.804226 | 2.391394e-49 | -8.615850e-47 |
| Msa0518440 | Msa0858390 | 0.820106 | 8.170339e-53 | -8.615850e-47 |
| Msa0521010 | Msa0858390 | 0.806944 | 6.431917e-50 | -8.615850e-47 |
| Msa0527540 | Msa0858390 | 0.815540 | 8.775087e-52 | -8.615850e-47 |
| Msa0532980 | Msa0858390 | 0.813798 | 2.132940e-51 | -8.615850e-47 |
| Msa0547160 | Msa0858390 | 0.801137 | 1.037870e-48 | -8.615850e-47 |
| Msa0548120 | Msa0858390 | 0.809385 | 1.942632e-50 | -8.615850e-47 |
| Msa0550010 | Msa0858390 | 0.845102 | 5.007437e-59 | -8.615850e-47 |
| Msa0566350 | Msa0858390 | 0.812404 | 4.313402e-51 | -8.615850e-47 |
| Msa0566750 | Msa0858390 | 0.806979 | 6.322388e-50 | -8.615850e-47 |
| Msa0574390 | Msa0858390 | 0.803150 | 3.998304e-49 | -8.615850e-47 |
| Msa0581010 | Msa0858390 | 0.825954 | 3.536114e-54 | -8.615850e-47 |
| Msa0858390 | Msa0861090 | 0.827846 | 1.248514e-54 | -8.615850e-47 |
| Msa0858390 | Msa0865030 | 0.806261 | 8.962478e-50 | -8.615850e-47 |
| Msa0858390 | Msa0878220 | 0.855985 | 4.367881e-62 | -8.615850e-47 |
| Msa0858390 | Msa0880450 | 0.823707 | 1.198039e-53 | -8.615850e-47 |
| Msa0858390 | Msa0880950 | 0.824251 | 8.929692e-54 | -8.615850e-47 |
| Msa0858390 | Msa0894710 | 0.801851 | 7.409788e-49 | -8.615850e-47 |
| Msa0858390 | Msa0898750 | 0.809036 | 2.307424e-50 | -8.615850e-47 |
| Msa0858390 | Msa0899970 | 0.801515 | 8.684222e-49 | -8.615850e-47 |
| Msa0858390 | Msa0919860 | 0.816240 | 6.123289e-52 | -8.615850e-47 |
| Msa0858390 | Msa0928130 | 0.816680 | 4.881910e-52 | -8.615850e-47 |
| Msa0858390 | Msa0943970 | 0.826400 | 2.769645e-54 | -8.615850e-47 |
| Msa0858390 | Msa0944020 | 0.824987 | 5.992282e-54 | -8.615850e-47 |
| Msa0858390 | Msa0945630 | 0.816036 | 6.801648e-52 | -8.615850e-47 |
| Msa0858390 | Msa0964310 | 0.829825 | 4.145546e-55 | -8.615850e-47 |
| Msa0858390 | Msa0965080 | 0.829013 | 6.525564e-55 | -8.615850e-47 |
| Msa0858390 | Msa0965290 | 0.837466 | 5.113845e-57 | -8.615850e-47 |
| Msa0858390 | Msa0980880 | 0.805474 | 1.312128e-49 | -8.615850e-47 |
| Msa0858390 | Msa0999680 | 0.838919 | 2.159658e-57 | -8.615850e-47 |
| Msa0858390 | Msa1002850 | 0.810625 | 1.050144e-50 | -8.615850e-47 |
| Msa0858390 | Msa1032770 | 0.812159 | 4.876697e-51 | -8.615850e-47 |
| Msa0858390 | Msa1034500 | 0.819618 | 1.056707e-52 | -8.615850e-47 |
| Msa0858390 | Msa1035480 | 0.813647 | 2.302801e-51 | -8.615850e-47 |
| Msa0858390 | Msa1035960 | 0.815298 | 9.934090e-52 | -8.615850e-47 |
| Msa0858390 | Msa1036300 | 0.809487 | 1.847123e-50 | -8.615850e-47 |
| Msa0858390 | Msa1047760 | 0.807732 | 4.377280e-50 | -8.615850e-47 |
| Msa0858390 | Msa1073080 | 0.800281 | 1.551215e-48 | -8.615850e-47 |
| Msa0858390 | Msa1089450 | 0.805087 | 1.580735e-49 | -8.615850e-47 |
| Msa0858390 | Msa1089460 | 0.813222 | 2.854566e-51 | -8.615850e-47 |
| Msa0858390 | Msa1094190 | 0.800242 | 1.580202e-48 | -8.615850e-47 |
| Msa0858390 | Msa1101090 | 0.842478 | 2.523028e-58 | -8.615850e-47 |
| Msa0858390 | Msa1104560 | 0.825755 | 3.942461e-54 | -8.615850e-47 |
| Msa0858390 | Msa1114590 | 0.806920 | 6.507305e-50 | -8.615850e-47 |
| Msa0858390 | Msa1119090 | 0.800121 | 1.671710e-48 | -8.615850e-47 |
| Msa0858390 | Msa1122150 | 0.812115 | 4.986193e-51 | -8.615850e-47 |
| Msa0858390 | Msa1137780 | 0.800317 | 1.525607e-48 | -8.615850e-47 |
| Msa0858390 | Msa1140630 | 0.803252 | 3.808577e-49 | -8.615850e-47 |
| Msa0858390 | Msa1145810 | 0.830777 | 2.426399e-55 | -8.615850e-47 |
| Msa0858390 | Msa1148090 | 0.804425 | 2.173701e-49 | -8.615850e-47 |
| Msa0858390 | Msa1162780 | 0.801074 | 1.069104e-48 | -8.615850e-47 |
| Msa0858390 | Msa1163090 | 0.802647 | 5.081083e-49 | -8.615850e-47 |
| Msa0858390 | Msa1173340 | 0.811851 | 5.693769e-51 | -8.615850e-47 |
| Msa0858390 | Msa1178580 | 0.805666 | 1.195927e-49 | -8.615850e-47 |
| Msa0858390 | Msa1179630 | 0.805928 | 1.053582e-49 | -8.615850e-47 |
| Msa0858390 | Msa1184910 | 0.804458 | 2.139664e-49 | -8.615850e-47 |
| Msa0858390 | Msa1199570 | 0.802924 | 4.453991e-49 | -8.615850e-47 |
| Msa0858390 | Msa1204530 | 0.827585 | 1.442282e-54 | -8.615850e-47 |
| Msa0858390 | Msa1204630 | 0.826221 | 3.055237e-54 | -8.615850e-47 |
| Msa0858390 | Msa1207310 | 0.826457 | 2.685094e-54 | -8.615850e-47 |
| Msa0858390 | Msa1211230 | -0.806814 | 6.851200e-50 | -8.615850e-47 |
| Msa0858390 | Msa1211420 | -0.805712 | 1.169286e-49 | -8.615850e-47 |
| Msa0858390 | Msa1213890 | 0.824384 | 8.311639e-54 | -8.615850e-47 |
| Msa0858390 | Msa1213980 | 0.804613 | 1.986396e-49 | -8.615850e-47 |
| Msa0858390 | Msa1232700 | 0.808133 | 3.597533e-50 | -8.615850e-47 |
| Msa0858390 | Msa1236360 | 0.800285 | 1.548288e-48 | -8.615850e-47 |
| Msa0858390 | Msa1246360 | 0.824895 | 6.299297e-54 | -8.615850e-47 |
| Msa0858390 | Msa1269890 | 0.800924 | 1.147226e-48 | -8.615850e-47 |
| Msa0858390 | Msa1271130 | 0.805718 | 1.165731e-49 | -8.615850e-47 |
| Msa0858390 | Msa1276150 | 0.808323 | 3.277013e-50 | -8.615850e-47 |
| Msa0858390 | Msa1277690 | 0.817902 | 2.590870e-52 | -8.615850e-47 |
| Msa0858390 | Msa1305810 | 0.822431 | 2.377102e-53 | -8.615850e-47 |
| Msa0858390 | Msa1308870 | 0.844480 | 7.367973e-59 | -8.615850e-47 |
| Msa0858390 | Msa1315750 | 0.808040 | 3.765728e-50 | -8.615850e-47 |
| Msa0858390 | Msa1325410 | -0.815261 | 1.011960e-51 | -8.615850e-47 |
| Msa0858390 | Msa1328710 | 0.808324 | 3.274987e-50 | -8.615850e-47 |
| Msa0858390 | Msa1330170 | 0.806038 | 9.984988e-50 | -8.615850e-47 |
| Msa0858390 | Msa1330180 | 0.807023 | 6.188092e-50 | -8.615850e-47 |
| Msa0858390 | Msa1331000 | 0.824602 | 7.387005e-54 | -8.615850e-47 |
| Msa0858390 | Msa1331320 | 0.846403 | 2.220601e-59 | -8.615850e-47 |
| Msa0858390 | Msa1332760 | 0.807372 | 5.220734e-50 | -8.615850e-47 |
| Msa0858390 | Msa1335540 | 0.808621 | 2.829949e-50 | -8.615850e-47 |
| Msa0858390 | Msa1345100 | 0.825964 | 3.516679e-54 | -8.615850e-47 |
| Msa0858390 | Msa1345940 | 0.809984 | 1.444147e-50 | -8.615850e-47 |
| Msa0858390 | Msa1346840 | 0.855302 | 6.910750e-62 | -8.615850e-47 |
| Msa0858390 | Msa1353980 | 0.814623 | 1.402175e-51 | -8.615850e-47 |
| Msa0858390 | Msa1363820 | -0.805084 | 1.583615e-49 | -8.615850e-47 |
| Msa0858390 | Msa1365610 | 0.803362 | 3.614698e-49 | -8.615850e-47 |
| Msa0858390 | Msa1368430 | 0.817556 | 3.102427e-52 | -8.615850e-47 |
| Msa0858390 | Msa1378410 | 0.835473 | 1.644009e-56 | -8.615850e-47 |
| Msa0858390 | Msa1380400 | 0.800380 | 1.481224e-48 | -8.615850e-47 |
| Msa0858390 | Msa1380900 | 0.820737 | 5.854465e-53 | -8.615850e-47 |
| Msa0858390 | Msa1383230 | 0.807743 | 4.354563e-50 | -8.615850e-47 |
| Msa0858390 | Msa1389880 | 0.801002 | 1.105842e-48 | -8.615850e-47 |
| Msa0858390 | Msa1394380 | 0.847360 | 1.214532e-59 | -8.615850e-47 |
| Msa0858390 | Msa1401990 | 0.840497 | 8.390965e-58 | -8.615850e-47 |
| Msa0858390 | Msa1404300 | 0.835658 | 1.475929e-56 | -8.615850e-47 |
| Msa0858390 | Msa1407190 | 0.827195 | 1.788929e-54 | -8.615850e-47 |
| Msa0858390 | Msa1408050 | 0.801502 | 8.737034e-49 | -8.615850e-47 |
| Msa0858390 | Msa1409700 | 0.819921 | 9.007512e-53 | -8.615850e-47 |
| Msa0858390 | Msa1410550 | 0.837230 | 5.875054e-57 | -8.615850e-47 |
| Msa0858390 | Msa1419690 | 0.862247 | 5.802156e-64 | -8.615850e-47 |
| Msa0858390 | Msa1432130 | 0.828826 | 7.245295e-55 | -8.615850e-47 |
| Msa0858390 | Msa1433390 | 0.806595 | 7.621687e-50 | -8.615850e-47 |
| Msa0858390 | Msa1436480 | 0.830187 | 3.381741e-55 | -8.615850e-47 |
| Msa0858390 | Msa1437730 | 0.800513 | 1.391442e-48 | -8.615850e-47 |
| Msa0858390 | Msa1442920 | 0.841036 | 6.060650e-58 | -8.615850e-47 |
| Msa0858390 | Msa1448560 | 0.819957 | 8.841768e-53 | -8.615850e-47 |
| Msa0858390 | Msa1452710 | 0.841880 | 3.633079e-58 | -8.615850e-47 |
| Msa0858390 | Msa1458680 | 0.807162 | 5.783999e-50 | -8.615850e-47 |
| Msa0858390 | Msa1463900 | 0.831462 | 1.646908e-55 | -8.615850e-47 |
| Msa0858390 | Msa1464810 | 0.801361 | 9.338188e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0858390 | MtrunA17_Chr5g0436971 | 89.922 | 129 | 3 | 1 | 1 | 119 | 1 | 129 | 3.04e-82 | 236 |
| Msa0858390 | MtrunA17_Chr3g0113291 | 69.531 | 128 | 29 | 1 | 1 | 118 | 24 | 151 | 1.91e-61 | 184 |
| Msa0858390 | MtrunA17_Chr7g0242231 | 61.947 | 113 | 33 | 1 | 1 | 103 | 1 | 113 | 1.51e-46 | 146 |
| Msa0858390 | MtrunA17_Chr2g0316921 | 62.766 | 94 | 35 | 0 | 1 | 94 | 1 | 94 | 1.24e-40 | 131 |
| Msa0858390 | MtrunA17_Chr8g0360291 | 59.574 | 94 | 38 | 0 | 1 | 94 | 1 | 94 | 1.58e-38 | 126 |
| Msa0858390 | MtrunA17_Chr4g0046851 | 55.319 | 94 | 42 | 0 | 1 | 94 | 1 | 94 | 4.52e-35 | 117 |
| Msa0858390 | MtrunA17_Chr3g0127211 | 50.602 | 83 | 41 | 0 | 12 | 94 | 8 | 90 | 4.49e-28 | 99.0 |
| Msa0858390 | MtrunA17_Chr8g0346501 | 48.193 | 83 | 43 | 0 | 12 | 94 | 8 | 90 | 3.03e-26 | 94.4 |
| Msa0858390 | MtrunA17_Chr1g0188931 | 44.578 | 83 | 46 | 0 | 12 | 94 | 8 | 90 | 1.50e-25 | 92.4 |
| Msa0858390 | MtrunA17_Chr2g0316891 | 54.902 | 51 | 23 | 0 | 44 | 94 | 42 | 92 | 1.73e-15 | 67.4 |
| Msa0858390 | MtrunA17_Chr1g0188951 | 51.064 | 47 | 23 | 0 | 48 | 94 | 1 | 47 | 1.95e-15 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0858390 | AT2G40110.1 | 70.769 | 130 | 27 | 2 | 1 | 119 | 1 | 130 | 1.69e-61 | 184 |
| Msa0858390 | AT3G11230.1 | 64.341 | 129 | 36 | 1 | 1 | 119 | 1 | 129 | 4.73e-57 | 173 |
| Msa0858390 | AT3G11230.2 | 64.341 | 129 | 36 | 1 | 1 | 119 | 34 | 162 | 1.12e-56 | 173 |
| Msa0858390 | AT2G40110.2 | 68.224 | 107 | 34 | 0 | 1 | 107 | 1 | 107 | 2.83e-51 | 158 |
| Msa0858390 | AT3G11230.4 | 73.404 | 94 | 25 | 0 | 1 | 94 | 1 | 94 | 6.20e-48 | 149 |
| Msa0858390 | AT3G11230.3 | 73.404 | 94 | 25 | 0 | 1 | 94 | 34 | 127 | 1.47e-47 | 149 |
| Msa0858390 | AT3G55890.4 | 56.198 | 121 | 51 | 1 | 1 | 119 | 1 | 121 | 1.04e-43 | 139 |
| Msa0858390 | AT3G55890.1 | 56.198 | 121 | 51 | 1 | 1 | 119 | 1 | 121 | 1.04e-43 | 139 |
| Msa0858390 | AT3G08990.2 | 53.125 | 128 | 50 | 1 | 1 | 118 | 1 | 128 | 1.10e-43 | 139 |
| Msa0858390 | AT3G08990.1 | 53.125 | 128 | 50 | 1 | 1 | 118 | 1 | 128 | 1.10e-43 | 139 |
| Msa0858390 | AT3G08990.3 | 53.125 | 128 | 50 | 1 | 1 | 118 | 1 | 128 | 1.10e-43 | 139 |
| Msa0858390 | AT2G40110.4 | 75.904 | 83 | 20 | 0 | 1 | 83 | 1 | 83 | 1.71e-43 | 137 |
| Msa0858390 | AT2G40110.3 | 75.904 | 83 | 20 | 0 | 1 | 83 | 1 | 83 | 1.71e-43 | 137 |
| Msa0858390 | AT5G53940.1 | 53.846 | 130 | 48 | 2 | 1 | 119 | 1 | 129 | 5.23e-42 | 135 |
| Msa0858390 | AT3G55890.3 | 63.830 | 94 | 34 | 0 | 1 | 94 | 1 | 94 | 1.26e-41 | 133 |
| Msa0858390 | AT3G55890.2 | 63.830 | 94 | 34 | 0 | 1 | 94 | 1 | 94 | 1.26e-41 | 133 |
| Msa0858390 | AT4G27745.2 | 54.217 | 83 | 38 | 0 | 12 | 94 | 8 | 90 | 7.61e-30 | 103 |
| Msa0858390 | AT4G27745.3 | 54.217 | 83 | 38 | 0 | 12 | 94 | 8 | 90 | 7.61e-30 | 103 |
| Msa0858390 | AT4G27745.1 | 54.217 | 83 | 38 | 0 | 12 | 94 | 8 | 90 | 7.61e-30 | 103 |
| Msa0858390 | AT4G27745.4 | 54.217 | 83 | 38 | 0 | 12 | 94 | 8 | 90 | 7.61e-30 | 103 |
| Msa0858390 | AT4G27740.1 | 40.741 | 81 | 48 | 0 | 14 | 94 | 10 | 90 | 2.03e-19 | 77.0 |
Find 45 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGATGTTCAATGAATT+TGG | 0.186911 | 5_4:-55745049 | Msa0858390:three_prime_UTR |
| GTCCTGATGGCAGCAATTAT+TGG | 0.259271 | 5_4:-55745169 | Msa0858390:CDS |
| TGTTACCTTTGGTTTGGTTT+TGG | 0.273266 | 5_4:+55748336 | None:intergenic |
| TCAATGAATTTGGATTTATA+AGG | 0.316897 | 5_4:-55745039 | Msa0858390:three_prime_UTR |
| TACAGTGTGAATGTTTCTAT+TGG | 0.322176 | 5_4:-55745696 | Msa0858390:intron |
| TAAGGACAATTTAGCAAAAT+CGG | 0.324041 | 5_4:-55745021 | Msa0858390:three_prime_UTR |
| TTGACCAGGTTCAAGGTGTC+TGG | 0.365136 | 5_4:-55745191 | Msa0858390:intron |
| GCCCCGAAAACCATTTGAAT+TGG | 0.365740 | 5_4:-55744992 | Msa0858390:three_prime_UTR |
| TCCTGATGGCAGCAATTATT+GGG | 0.368015 | 5_4:-55745168 | Msa0858390:CDS |
| TGTTTCTATTGGAGAATTAG+AGG | 0.372709 | 5_4:-55745685 | Msa0858390:CDS |
| TTGTTTGTTGTTCATCTTGA+AGG | 0.413695 | 5_4:-55748143 | Msa0858390:CDS |
| GTTGAATGTTACCTTTGGTT+TGG | 0.431009 | 5_4:+55748330 | None:intergenic |
| ATGAGAATCACCAATTCAAA+TGG | 0.447332 | 5_4:+55744982 | None:intergenic |
| ACCCAATAATTGCTGCCATC+AGG | 0.450327 | 5_4:+55745167 | None:intergenic |
| CAAGGATAACTTACACCTTA+CGG | 0.472783 | 5_4:+55745975 | None:intergenic |
| GAGGACAGAAATATGATGAC+TGG | 0.475545 | 5_4:-55745666 | Msa0858390:CDS |
| TTGTGAAGATGTTGTTTCAA+AGG | 0.476254 | 5_4:-55748078 | Msa0858390:intron |
| TTCAAGGTGTCTGGTCCTGA+TGG | 0.507863 | 5_4:-55745182 | Msa0858390:CDS |
| CAGGCTTTCCACAGCAGACA+TGG | 0.524156 | 5_4:-55746013 | Msa0858390:CDS |
| AGAAGAGTACGTAAGAAATG+AGG | 0.534507 | 5_4:+55748361 | None:intergenic |
| TTTCAACACCATGTGTTGCA+TGG | 0.544712 | 5_4:+55745141 | None:intergenic |
| GTCGGTTGTGGATCAATCCT+CGG | 0.549786 | 5_4:-55745615 | Msa0858390:CDS |
| TTGTTGTTCATCTTGAAGGA+AGG | 0.554689 | 5_4:-55748139 | Msa0858390:CDS |
| AATTCAATTGTCAATGAGGA+CGG | 0.563540 | 5_4:+55745093 | None:intergenic |
| TTTCCACAGCAGACATGGGA+AGG | 0.566067 | 5_4:-55746008 | Msa0858390:CDS |
| ATTCAATTGTCAATGAGGAC+GGG | 0.570367 | 5_4:+55745094 | None:intergenic |
| GATCTTGTTCAGTTATTGCG+TGG | 0.576508 | 5_4:-55748193 | Msa0858390:intron |
| GTTGTGGATCAATCCTCGGT+TGG | 0.576717 | 5_4:-55745611 | Msa0858390:CDS |
| AGGCTTTCCACAGCAGACAT+GGG | 0.597650 | 5_4:-55746012 | Msa0858390:CDS |
| AAGCCTTCCCATGTCTGCTG+TGG | 0.600078 | 5_4:+55746005 | None:intergenic |
| TGGGTTAGCCATGCAACACA+TGG | 0.601436 | 5_4:-55745149 | Msa0858390:CDS |
| ACATCTTCACAAAGAGCAAG+AGG | 0.603930 | 5_4:+55748089 | None:intergenic |
| AGGACAGAAATATGATGACT+GGG | 0.607783 | 5_4:-55745665 | Msa0858390:CDS |
| CATCTTCACAAAGAGCAAGA+GGG | 0.619095 | 5_4:+55748090 | None:intergenic |
| TCATTGAACATCAACAGCGA+GGG | 0.621399 | 5_4:+55745055 | None:intergenic |
| ATCTTCACAAAGAGCAAGAG+GGG | 0.623684 | 5_4:+55748091 | None:intergenic |
| TCTCTCCAAAACCAAACCAA+AGG | 0.628109 | 5_4:-55748341 | Msa0858390:intron |
| CATTGAACATCAACAGCGAG+GGG | 0.628788 | 5_4:+55745056 | None:intergenic |
| ATACAATTCAATTGTCAATG+AGG | 0.629874 | 5_4:+55745089 | None:intergenic |
| GAAGGCTTATCTCTTCCGTA+AGG | 0.633340 | 5_4:-55745990 | Msa0858390:CDS |
| GTAGAACACGACAAGATGCG+TGG | 0.648848 | 5_4:+55748420 | None:intergenic |
| TAGAACACGACAAGATGCGT+GGG | 0.660783 | 5_4:+55748421 | None:intergenic |
| TTCATTGAACATCAACAGCG+AGG | 0.661580 | 5_4:+55745054 | None:intergenic |
| GTCTTACATATGTCCAACCG+AGG | 0.682634 | 5_4:+55745598 | None:intergenic |
| GATGACTGGGATGCATACTG+TGG | 0.714746 | 5_4:-55745652 | Msa0858390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTCATAAAAAAATTAAAATT+GGG | + | chr5_4:55745315-55745334 | None:intergenic | 10.0% |
| !! | TCTCATAAAAAAATTAAAAT+TGG | + | chr5_4:55745316-55745335 | None:intergenic | 10.0% |
| !! | AAAATGAATTTATAAATTAG+GGG | - | chr5_4:55746323-55746342 | Msa0858390:intron | 10.0% |
| !!! | AATTTTCTTAGTTGAATTAT+GGG | - | chr5_4:55745171-55745190 | Msa0858390:CDS | 15.0% |
| !!! | TTTAAGTTTTTGTTTATGTT+TGG | - | chr5_4:55745348-55745367 | Msa0858390:intron | 15.0% |
| !!! | ATTTGTAATTTATTTTACTG+TGG | - | chr5_4:55745951-55745970 | Msa0858390:intron | 15.0% |
| !!! | TATTTGGTTTATAACAATTT+AGG | - | chr5_4:55746030-55746049 | Msa0858390:intron | 15.0% |
| !!! | ATTTGGTTTATAACAATTTA+GGG | - | chr5_4:55746031-55746050 | Msa0858390:intron | 15.0% |
| !! | AATAAGTAAAGATAAACAAT+CGG | - | chr5_4:55746227-55746246 | Msa0858390:intron | 15.0% |
| !!! | ATTAAGAAAAAGTTGAATTT+TGG | + | chr5_4:55747207-55747226 | None:intergenic | 15.0% |
| !!! | ACTTTTTCTTAATGTTTTAA+CGG | - | chr5_4:55747214-55747233 | Msa0858390:intron | 15.0% |
| !!! | ATTGATAATAATTAGAACAA+GGG | - | chr5_4:55748007-55748026 | Msa0858390:intron | 15.0% |
| !! | AGTCAAATATAAATCACAAA+AGG | + | chr5_4:55745072-55745091 | None:intergenic | 20.0% |
| !!! | GAATTTTCTTAGTTGAATTA+TGG | - | chr5_4:55745170-55745189 | Msa0858390:CDS | 20.0% |
| !! | TTGTTAAAAACTAAACCTAA+TGG | + | chr5_4:55745430-55745449 | None:intergenic | 20.0% |
| !!! | TGCTATTAACTAAAACTTTT+TGG | - | chr5_4:55746701-55746720 | Msa0858390:intron | 20.0% |
| !! | ATATGTATATATATTCTGAC+TGG | - | chr5_4:55747281-55747300 | Msa0858390:intron | 20.0% |
| !!! | ACAGTAATGTTTTTTATTCA+TGG | - | chr5_4:55747530-55747549 | Msa0858390:intron | 20.0% |
| !!! | CATTGATAATAATTAGAACA+AGG | - | chr5_4:55748006-55748025 | Msa0858390:intron | 20.0% |
| !! | TCAATGAATTTGGATTTATA+AGG | - | chr5_4:55748302-55748321 | Msa0858390:intron | 20.0% |
| ! | AGACAGTTAAAGAACAAAAA+TGG | + | chr5_4:55745124-55745143 | None:intergenic | 25.0% |
| ! | TTGAAACTTCAACAAAACTA+CGG | + | chr5_4:55745407-55745426 | None:intergenic | 25.0% |
| !!! | TGTAATTTATTTTACTGTGG+TGG | - | chr5_4:55745954-55745973 | Msa0858390:intron | 25.0% |
| !!! | GTAATTTATTTTACTGTGGT+GGG | - | chr5_4:55745955-55745974 | Msa0858390:intron | 25.0% |
| ! | ATAATCACAGTTTCAGTTTA+TGG | - | chr5_4:55745983-55746002 | Msa0858390:intron | 25.0% |
| !! | ACAGCTTAAATTTTGTGTTA+AGG | - | chr5_4:55746158-55746177 | Msa0858390:intron | 25.0% |
| !!! | ATGCTTAAGCACTTTTATTT+CGG | + | chr5_4:55746358-55746377 | None:intergenic | 25.0% |
| ! | AGATGAAAGACAATAACATA+AGG | + | chr5_4:55746572-55746591 | None:intergenic | 25.0% |
| ! | TAAGCATTTATAAGTTTCCA+AGG | + | chr5_4:55746631-55746650 | None:intergenic | 25.0% |
| !! | AAACCATTCTATTCTGATTT+TGG | - | chr5_4:55747059-55747078 | Msa0858390:intron | 25.0% |
| !!! | TATAAACGACCAAGTTTTTT+AGG | - | chr5_4:55747120-55747139 | Msa0858390:intron | 25.0% |
| !!! | ATAAACGACCAAGTTTTTTA+GGG | - | chr5_4:55747121-55747140 | Msa0858390:intron | 25.0% |
| ! | GATGATATTTCCATTTAAAC+CGG | + | chr5_4:55747147-55747166 | None:intergenic | 25.0% |
| !!! | GTTTTAACGGTTTTTTTAGT+TGG | - | chr5_4:55747227-55747246 | Msa0858390:intron | 25.0% |
| !!! | ATGTTTTTTATTCATGGCTT+TGG | - | chr5_4:55747536-55747555 | Msa0858390:intron | 25.0% |
| !!! | TGTTTTTTATTCATGGCTTT+GGG | - | chr5_4:55747537-55747556 | Msa0858390:intron | 25.0% |
| ! | ACTAACTGCAAAATATAATG+CGG | + | chr5_4:55747587-55747606 | None:intergenic | 25.0% |
| ! | ATACAATTCAATTGTCAATG+AGG | + | chr5_4:55748255-55748274 | None:intergenic | 25.0% |
| ! | TAAGGACAATTTAGCAAAAT+CGG | - | chr5_4:55748320-55748339 | Msa0858390:intron | 25.0% |
| AAAACGTTGAATGTTACCTT+TGG | + | chr5_4:55745019-55745038 | None:intergenic | 30.0% | |
| !! | TTGTTTGTTGTTCATCTTGA+AGG | - | chr5_4:55745198-55745217 | Msa0858390:intron | 30.0% |
| !! | TTGTGAAGATGTTGTTTCAA+AGG | - | chr5_4:55745263-55745282 | Msa0858390:intron | 30.0% |
| TTGTTGAAGTTTCAACGATT+AGG | - | chr5_4:55745412-55745431 | Msa0858390:intron | 30.0% | |
| TCGAAACTTCAACAAAACTA+TGG | + | chr5_4:55745506-55745525 | None:intergenic | 30.0% | |
| TCGAAACTTCAACAAAACTA+TGG | + | chr5_4:55745506-55745525 | None:intergenic | 30.0% | |
| TTTCAGTTTATGGTGATAGT+TGG | - | chr5_4:55745993-55746012 | Msa0858390:CDS | 30.0% | |
| TTTGTGTTAAGGTACACAAA+TGG | - | chr5_4:55746169-55746188 | Msa0858390:intron | 30.0% | |
| ATGGTCGGAAATTAAAGTTA+TGG | - | chr5_4:55746188-55746207 | Msa0858390:intron | 30.0% | |
| GAATTTATAAATTAGGGGTG+AGG | - | chr5_4:55746328-55746347 | Msa0858390:intron | 30.0% | |
| !! | GAAATAAAAGTGCTTAAGCA+TGG | - | chr5_4:55746357-55746376 | Msa0858390:intron | 30.0% |
| CAATGATGCAAGATACAAAA+TGG | - | chr5_4:55746388-55746407 | Msa0858390:intron | 30.0% | |
| TTTGTGTACCAATACACAAA+TGG | + | chr5_4:55746502-55746521 | None:intergenic | 30.0% | |
| AGACAATAACATAAGGTTGA+AGG | + | chr5_4:55746565-55746584 | None:intergenic | 30.0% | |
| TGTACTTCAGAATTAGACAA+TGG | + | chr5_4:55746878-55746897 | None:intergenic | 30.0% | |
| GTGAATTATGTAGATTGTAG+AGG | + | chr5_4:55746991-55747010 | None:intergenic | 30.0% | |
| TCACTGAGCTGTTATATTAT+TGG | - | chr5_4:55747007-55747026 | Msa0858390:intron | 30.0% | |
| TGGTTTCATATATTTCACAG+AGG | - | chr5_4:55747027-55747046 | Msa0858390:intron | 30.0% | |
| GAACCAAAATCAGAATAGAA+TGG | + | chr5_4:55747065-55747084 | None:intergenic | 30.0% | |
| TGGAATCGACATTTCTTTAT+TGG | - | chr5_4:55747247-55747266 | Msa0858390:intron | 30.0% | |
| GATTTCGGTTTCATTGAAAA+TGG | + | chr5_4:55747440-55747459 | None:intergenic | 30.0% | |
| ACCTTTGATTACAAACTACA+AGG | + | chr5_4:55747500-55747519 | None:intergenic | 30.0% | |
| ! | GTTTGTAATCAAAGGTGTAA+AGG | - | chr5_4:55747504-55747523 | Msa0858390:intron | 30.0% |
| ! | TACAGTGTGAATGTTTCTAT+TGG | - | chr5_4:55747645-55747664 | Msa0858390:intron | 30.0% |
| ! | TGTTTCTATTGGAGAATTAG+AGG | - | chr5_4:55747656-55747675 | Msa0858390:intron | 30.0% |
| CATTAAGTTAAGTTACCCTT+TGG | - | chr5_4:55747808-55747827 | Msa0858390:intron | 30.0% | |
| ! | ATTTTCCTTCTTTGTACTTC+TGG | + | chr5_4:55747864-55747883 | None:intergenic | 30.0% |
| AAGGAAAATCTGTTCTTGAA+CGG | - | chr5_4:55747875-55747894 | Msa0858390:intron | 30.0% | |
| AATTCAATTGTCAATGAGGA+CGG | + | chr5_4:55748251-55748270 | None:intergenic | 30.0% | |
| CTGTTGATGTTCAATGAATT+TGG | - | chr5_4:55748292-55748311 | Msa0858390:intron | 30.0% | |
| ! | TCACCAATTCAAATGGTTTT+CGG | + | chr5_4:55748355-55748374 | None:intergenic | 30.0% |
| ATGAGAATCACCAATTCAAA+TGG | + | chr5_4:55748362-55748381 | None:intergenic | 30.0% | |
| ! | AGAAGAGTACGTAAGAAATG+AGG | + | chr5_4:55744983-55745002 | None:intergenic | 35.0% |
| !!! | TGTTACCTTTGGTTTGGTTT+TGG | + | chr5_4:55745008-55745027 | None:intergenic | 35.0% |
| GTTGAATGTTACCTTTGGTT+TGG | + | chr5_4:55745014-55745033 | None:intergenic | 35.0% | |
| ! | TTGTTGTTCATCTTGAAGGA+AGG | - | chr5_4:55745202-55745221 | Msa0858390:intron | 35.0% |
| TTGTTGAAGTTTCGACGATT+AGG | - | chr5_4:55745511-55745530 | Msa0858390:intron | 35.0% | |
| CGATGACATACTATGATTCA+TGG | - | chr5_4:55745554-55745573 | Msa0858390:intron | 35.0% | |
| TTGTTGAAGTTTCGACGATT+AGG | - | chr5_4:55745511-55745530 | Msa0858390:intron | 35.0% | |
| TTGTTGAAGTTTCGACGATT+AGG | - | chr5_4:55745511-55745530 | Msa0858390:intron | 35.0% | |
| TTGTTGAAGTTTCGACCATT+AGG | - | chr5_4:55745850-55745869 | Msa0858390:intron | 35.0% | |
| AATCAGATTTGCAGTGACTT+CGG | + | chr5_4:55745917-55745936 | None:intergenic | 35.0% | |
| GGATAACAGCTTTGCTTATT+TGG | - | chr5_4:55746014-55746033 | Msa0858390:intron | 35.0% | |
| ! | CACGCTTGATAATCGATTTA+AGG | - | chr5_4:55746120-55746139 | Msa0858390:intron | 35.0% |
| ! | TCGATTTAAGGTTGCGTTTA+TGG | - | chr5_4:55746132-55746151 | Msa0858390:intron | 35.0% |
| TGTTAAGGTACACAAATGGT+CGG | - | chr5_4:55746173-55746192 | Msa0858390:intron | 35.0% | |
| GTCGGAAATTAAAGTTATGG+TGG | - | chr5_4:55746191-55746210 | Msa0858390:intron | 35.0% | |
| ! | AAAGTTATGGTGGAACTAGA+AGG | - | chr5_4:55746201-55746220 | Msa0858390:intron | 35.0% |
| AGATAAACAATCGGAGTGAT+CGG | - | chr5_4:55746236-55746255 | Msa0858390:intron | 35.0% | |
| ! | ACTTGACTGTATTACTGGTT+GGG | - | chr5_4:55746273-55746292 | Msa0858390:intron | 35.0% |
| TTTAATCGTCATGCTTCAAC+TGG | + | chr5_4:55746306-55746325 | None:intergenic | 35.0% | |
| CAACTATTCTCAGGATGTAT+CGG | + | chr5_4:55746426-55746445 | None:intergenic | 35.0% | |
| GTCATCAACCATTTGTGTAT+TGG | - | chr5_4:55746491-55746510 | Msa0858390:intron | 35.0% | |
| TGAAGGTGGTCATTAAATCA+AGG | + | chr5_4:55746548-55746567 | None:intergenic | 35.0% | |
| CAATAACATAAGGTTGAAGG+TGG | + | chr5_4:55746562-55746581 | None:intergenic | 35.0% | |
| !! | GTTTTGGCATTAGCACAATT+TGG | + | chr5_4:55746598-55746617 | None:intergenic | 35.0% |
| TATGAGTGTATCTGACAAAG+TGG | - | chr5_4:55746742-55746761 | Msa0858390:intron | 35.0% | |
| AGAAGTTACTTCTGTGCAAA+AGG | - | chr5_4:55746813-55746832 | Msa0858390:intron | 35.0% | |
| TTACTTCTGTGCAAAAGGAA+AGG | - | chr5_4:55746818-55746837 | Msa0858390:intron | 35.0% | |
| !! | GGAAGTAATCCTACTTTTGA+AGG | - | chr5_4:55746842-55746861 | Msa0858390:intron | 35.0% |
| GCAAATAGTCCTTCAAAAGT+AGG | + | chr5_4:55746854-55746873 | None:intergenic | 35.0% | |
| !!! | TTTTTTAGGGCCGGTTTAAA+TGG | - | chr5_4:55747134-55747153 | Msa0858390:intron | 35.0% |
| !! | TTACTTGTGCTGTTTCATTC+AGG | - | chr5_4:55747309-55747328 | Msa0858390:intron | 35.0% |
| CAAGGATAACTTACACCTTA+CGG | + | chr5_4:55747369-55747388 | None:intergenic | 35.0% | |
| GTGTAAGTTATCCTTGACAT+TGG | - | chr5_4:55747373-55747392 | Msa0858390:intron | 35.0% | |
| ATGGTGAAACCAAAGTTATC+AGG | + | chr5_4:55747421-55747440 | None:intergenic | 35.0% | |
| ATGCAGGACAAAAGGTTAAA+GGG | + | chr5_4:55747468-55747487 | None:intergenic | 35.0% | |
| ! | CTTTTGTCCTGCATCATTTT+GGG | - | chr5_4:55747474-55747493 | Msa0858390:intron | 35.0% |
| ! | GCCTTGTAGTTTGTAATCAA+AGG | - | chr5_4:55747496-55747515 | Msa0858390:intron | 35.0% |
| AGGACAGAAATATGATGACT+GGG | - | chr5_4:55747676-55747695 | Msa0858390:intron | 35.0% | |
| ACTTAATGCAGCATAGAAAC+AGG | + | chr5_4:55747796-55747815 | None:intergenic | 35.0% | |
| ! | AAAAGCCAGAAGTACAAAGA+AGG | - | chr5_4:55747856-55747875 | Msa0858390:intron | 35.0% |
| AGCGATATATAAGTATGTCG+TGG | - | chr5_4:55748108-55748127 | Msa0858390:CDS | 35.0% | |
| ATTCAATTGTCAATGAGGAC+GGG | + | chr5_4:55748250-55748269 | None:intergenic | 35.0% | |
| ! | ACCAATTCAAATGGTTTTCG+GGG | + | chr5_4:55748353-55748372 | None:intergenic | 35.0% |
| ! | CACCAATTCAAATGGTTTTC+GGG | + | chr5_4:55748354-55748373 | None:intergenic | 35.0% |
| TCTCTCCAAAACCAAACCAA+AGG | - | chr5_4:55745000-55745019 | Msa0858390:three_prime_UTR | 40.0% | |
| GATCTTGTTCAGTTATTGCG+TGG | - | chr5_4:55745148-55745167 | Msa0858390:CDS | 40.0% | |
| ATCTTCACAAAGAGCAAGAG+GGG | + | chr5_4:55745253-55745272 | None:intergenic | 40.0% | |
| CATCTTCACAAAGAGCAAGA+GGG | + | chr5_4:55745254-55745273 | None:intergenic | 40.0% | |
| ACATCTTCACAAAGAGCAAG+AGG | + | chr5_4:55745255-55745274 | None:intergenic | 40.0% | |
| CGATGACGTACTATGATTCA+TGG | - | chr5_4:55745596-55745615 | Msa0858390:intron | 40.0% | |
| CACTTGACTGTATTACTGGT+TGG | - | chr5_4:55746272-55746291 | Msa0858390:intron | 40.0% | |
| AGTGCTTAAGCATGGTATTG+TGG | - | chr5_4:55746365-55746384 | Msa0858390:intron | 40.0% | |
| ! | CATCCTGAGAATAGTTGATG+CGG | - | chr5_4:55746429-55746448 | Msa0858390:intron | 40.0% |
| !! | CCAAGGAAGCATACATGTTT+TGG | + | chr5_4:55746614-55746633 | None:intergenic | 40.0% |
| CCAAAACATGTATGCTTCCT+TGG | - | chr5_4:55746611-55746630 | Msa0858390:intron | 40.0% | |
| TAAACCGGCCCTAAAAAACT+TGG | + | chr5_4:55747132-55747151 | None:intergenic | 40.0% | |
| !! | AGTGAAAGGTACCAATGTCA+AGG | + | chr5_4:55747387-55747406 | None:intergenic | 40.0% |
| GTGTTCTGTCCTGATAACTT+TGG | - | chr5_4:55747409-55747428 | Msa0858390:intron | 40.0% | |
| GGTTAAAGGGTGGAAGATTT+CGG | + | chr5_4:55747455-55747474 | None:intergenic | 40.0% | |
| GATGCAGGACAAAAGGTTAA+AGG | + | chr5_4:55747469-55747488 | None:intergenic | 40.0% | |
| CCAAAATGATGCAGGACAAA+AGG | + | chr5_4:55747476-55747495 | None:intergenic | 40.0% | |
| ! | CCTTTTGTCCTGCATCATTT+TGG | - | chr5_4:55747473-55747492 | Msa0858390:intron | 40.0% |
| TATAATGCGGCTAGAGCTAA+TGG | + | chr5_4:55747574-55747593 | None:intergenic | 40.0% | |
| GAGGACAGAAATATGATGAC+TGG | - | chr5_4:55747675-55747694 | Msa0858390:intron | 40.0% | |
| ! | GTTACCCTTTGGTTTCTTTC+AGG | - | chr5_4:55747819-55747838 | Msa0858390:intron | 40.0% |
| GTCTCCTGAAAGAAACCAAA+GGG | + | chr5_4:55747826-55747845 | None:intergenic | 40.0% | |
| AGTCTCCTGAAAGAAACCAA+AGG | + | chr5_4:55747827-55747846 | None:intergenic | 40.0% | |
| TAATTACTCTGTCAGTGTCG+TGG | - | chr5_4:55748043-55748062 | Msa0858390:intron | 40.0% | |
| TGCCAAACATCAACACATGT+CGG | - | chr5_4:55748069-55748088 | Msa0858390:intron | 40.0% | |
| TATATCGCTCAAAACCCATG+TGG | + | chr5_4:55748097-55748116 | None:intergenic | 40.0% | |
| ! | GAGTTTTTGCTCTTTTGACC+AGG | - | chr5_4:55748136-55748155 | Msa0858390:CDS | 40.0% |
| TCCTGATGGCAGCAATTATT+GGG | - | chr5_4:55748173-55748192 | Msa0858390:exon | 40.0% | |
| TTTCAACACCATGTGTTGCA+TGG | + | chr5_4:55748203-55748222 | None:intergenic | 40.0% | |
| TCATTGAACATCAACAGCGA+GGG | + | chr5_4:55748289-55748308 | None:intergenic | 40.0% | |
| TTCATTGAACATCAACAGCG+AGG | + | chr5_4:55748290-55748309 | None:intergenic | 40.0% | |
| CGATGACGCACTATGATTCA+TGG | - | chr5_4:55745455-55745474 | Msa0858390:intron | 45.0% | |
| CTACCGCATCAACTATTCTC+AGG | + | chr5_4:55746435-55746454 | None:intergenic | 45.0% | |
| ! | GAGAATAGTTGATGCGGTAG+TGG | - | chr5_4:55746435-55746454 | Msa0858390:intron | 45.0% |
| CTTCTGTGCAAAAGGAAAGG+TGG | - | chr5_4:55746821-55746840 | Msa0858390:intron | 45.0% | |
| !!! | ACGACCAAGTTTTTTAGGGC+CGG | - | chr5_4:55747125-55747144 | Msa0858390:intron | 45.0% |
| GAAGGCTTATCTCTTCCGTA+AGG | - | chr5_4:55747351-55747370 | Msa0858390:intron | 45.0% | |
| AGGACAGAACACGTAGTGAA+AGG | + | chr5_4:55747401-55747420 | None:intergenic | 45.0% | |
| CAGGACAAAAGGTTAAAGGG+TGG | + | chr5_4:55747465-55747484 | None:intergenic | 45.0% | |
| TACAAGGCCCAAAATGATGC+AGG | + | chr5_4:55747484-55747503 | None:intergenic | 45.0% | |
| TAGAGCTAATGGAGATTCGG+AGG | + | chr5_4:55747563-55747582 | None:intergenic | 45.0% | |
| GGCTAGAGCTAATGGAGATT+CGG | + | chr5_4:55747566-55747585 | None:intergenic | 45.0% | |
| ! | GTGGCTGACATTTTCTGTGT+CGG | - | chr5_4:55747708-55747727 | Msa0858390:intron | 45.0% |
| !!! | GACATTTTCTGTGTCGGTTG+TGG | - | chr5_4:55747714-55747733 | Msa0858390:intron | 45.0% |
| GTCTTACATATGTCCAACCG+AGG | + | chr5_4:55747746-55747765 | None:intergenic | 45.0% | |
| ! | CACCGACATGTGTTGATGTT+TGG | + | chr5_4:55748074-55748093 | None:intergenic | 45.0% |
| ! | TGCTCTTTTGACCAGGTTCA+AGG | - | chr5_4:55748143-55748162 | Msa0858390:CDS | 45.0% |
| GTCCTGATGGCAGCAATTAT+TGG | - | chr5_4:55748172-55748191 | Msa0858390:exon | 45.0% | |
| ACCCAATAATTGCTGCCATC+AGG | + | chr5_4:55748177-55748196 | None:intergenic | 45.0% | |
| CATTGAACATCAACAGCGAG+GGG | + | chr5_4:55748288-55748307 | None:intergenic | 45.0% | |
| GCCCCGAAAACCATTTGAAT+TGG | - | chr5_4:55748349-55748368 | Msa0858390:five_prime_UTR | 45.0% | |
| !! | TTAAAATGAATTTATAAATT+AGG | - | chr5_4:55746321-55746340 | Msa0858390:intron | 5.0% |
| !! | TAAAATGAATTTATAAATTA+GGG | - | chr5_4:55746322-55746341 | Msa0858390:intron | 5.0% |
| CGATGACGCGCTATGATTCA+TGG | - | chr5_4:55745695-55745714 | Msa0858390:intron | 50.0% | |
| ! | GGGGCACTTGACTGTATTAC+TGG | - | chr5_4:55746268-55746287 | Msa0858390:intron | 50.0% |
| !! | TGGTGCTGTTTCGGCAGTTT+CGG | + | chr5_4:55746463-55746482 | None:intergenic | 50.0% |
| AAACTGCCGAAACAGCACCA+TGG | - | chr5_4:55746463-55746482 | Msa0858390:intron | 50.0% | |
| AGGCTTTCCACAGCAGACAT+GGG | - | chr5_4:55747329-55747348 | Msa0858390:intron | 50.0% | |
| TTTCCACAGCAGACATGGGA+AGG | - | chr5_4:55747333-55747352 | Msa0858390:intron | 50.0% | |
| GATGACTGGGATGCATACTG+TGG | - | chr5_4:55747689-55747708 | Msa0858390:intron | 50.0% | |
| GTCGGTTGTGGATCAATCCT+CGG | - | chr5_4:55747726-55747745 | Msa0858390:intron | 50.0% | |
| GTTGTGGATCAATCCTCGGT+TGG | - | chr5_4:55747730-55747749 | Msa0858390:intron | 50.0% | |
| !! | AACACATGTCGGTGCCACAT+GGG | - | chr5_4:55748080-55748099 | Msa0858390:CDS | 50.0% |
| ! | TTGACCAGGTTCAAGGTGTC+TGG | - | chr5_4:55748150-55748169 | Msa0858390:CDS | 50.0% |
| ! | TTCAAGGTGTCTGGTCCTGA+TGG | - | chr5_4:55748159-55748178 | Msa0858390:exon | 50.0% |
| !! | TGGGTTAGCCATGCAACACA+TGG | - | chr5_4:55748192-55748211 | Msa0858390:intron | 50.0% |
| CGACGTCGCGCTATGATTCA+TGG | - | chr5_4:55745794-55745813 | Msa0858390:intron | 55.0% | |
| AATCGGAGTGATCGGCCTTG+AGG | - | chr5_4:55746244-55746263 | Msa0858390:intron | 55.0% | |
| !! | ATGGTTGATGACCGCTGCCA+TGG | + | chr5_4:55746483-55746502 | None:intergenic | 55.0% |
| CAGGCTTTCCACAGCAGACA+TGG | - | chr5_4:55747328-55747347 | Msa0858390:intron | 55.0% | |
| AAGCCTTCCCATGTCTGCTG+TGG | + | chr5_4:55747339-55747358 | None:intergenic | 55.0% | |
| !! | CAACACATGTCGGTGCCACA+TGG | - | chr5_4:55748079-55748098 | Msa0858390:CDS | 55.0% |
| AGGACCAGACACCTTGAACC+TGG | + | chr5_4:55748157-55748176 | None:intergenic | 55.0% | |
| !! | CCGCTGCCATGGTGCTGTTT+CGG | + | chr5_4:55746472-55746491 | None:intergenic | 60.0% |
| CCGAAACAGCACCATGGCAG+CGG | - | chr5_4:55746469-55746488 | Msa0858390:intron | 60.0% | |
| CGGAGTGATCGGCCTTGAGG+CGG | - | chr5_4:55746247-55746266 | Msa0858390:intron | 65.0% | |
| GGAGTGATCGGCCTTGAGGC+GGG | - | chr5_4:55746248-55746267 | Msa0858390:intron | 65.0% | |
| GAGTGATCGGCCTTGAGGCG+GGG | - | chr5_4:55746249-55746268 | Msa0858390:intron | 65.0% | |
| CAGTCAAGTGCCCCGCCTCA+AGG | + | chr5_4:55746262-55746281 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 55744922 | 55748441 | 55744922 | ID=Msa0858390;Name=Msa0858390 |
| chr5_4 | mRNA | 55744922 | 55748441 | 55744922 | ID=Msa0858390-mRNA-1;Parent=Msa0858390;Name=Msa0858390-mRNA-1;_AED=0.14;_eAED=0.14;_QI=129|0.8|0.83|1|0.8|0.83|6|199|119 |
| chr5_4 | exon | 55744922 | 55745205 | 55744922 | ID=Msa0858390-mRNA-1:exon:17080;Parent=Msa0858390-mRNA-1 |
| chr5_4 | exon | 55745497 | 55745522 | 55745497 | ID=Msa0858390-mRNA-1:exon:17079;Parent=Msa0858390-mRNA-1 |
| chr5_4 | exon | 55745605 | 55745713 | 55745605 | ID=Msa0858390-mRNA-1:exon:17078;Parent=Msa0858390-mRNA-1 |
| chr5_4 | exon | 55745989 | 55746032 | 55745989 | ID=Msa0858390-mRNA-1:exon:17077;Parent=Msa0858390-mRNA-1 |
| chr5_4 | exon | 55748079 | 55748203 | 55748079 | ID=Msa0858390-mRNA-1:exon:17076;Parent=Msa0858390-mRNA-1 |
| chr5_4 | exon | 55748342 | 55748441 | 55748342 | ID=Msa0858390-mRNA-1:exon:17075;Parent=Msa0858390-mRNA-1 |
| chr5_4 | five_prime_UTR | 55748342 | 55748441 | 55748342 | ID=Msa0858390-mRNA-1:five_prime_utr;Parent=Msa0858390-mRNA-1 |
| chr5_4 | five_prime_UTR | 55748175 | 55748203 | 55748175 | ID=Msa0858390-mRNA-1:five_prime_utr;Parent=Msa0858390-mRNA-1 |
| chr5_4 | CDS | 55748079 | 55748174 | 55748079 | ID=Msa0858390-mRNA-1:cds;Parent=Msa0858390-mRNA-1 |
| chr5_4 | CDS | 55745989 | 55746032 | 55745989 | ID=Msa0858390-mRNA-1:cds;Parent=Msa0858390-mRNA-1 |
| chr5_4 | CDS | 55745605 | 55745713 | 55745605 | ID=Msa0858390-mRNA-1:cds;Parent=Msa0858390-mRNA-1 |
| chr5_4 | CDS | 55745497 | 55745522 | 55745497 | ID=Msa0858390-mRNA-1:cds;Parent=Msa0858390-mRNA-1 |
| chr5_4 | CDS | 55745121 | 55745205 | 55745121 | ID=Msa0858390-mRNA-1:cds;Parent=Msa0858390-mRNA-1 |
| chr5_4 | three_prime_UTR | 55744922 | 55745120 | 55744922 | ID=Msa0858390-mRNA-1:three_prime_utr;Parent=Msa0858390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
