AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0076290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0076290 MtrunA17_Chr1g0185241 95.490 1796 81 0 109 1904 1 1796 0.0 3414
Msa0076290 MtrunA17_Chr7g0260161 66.227 1137 367 6 112 1243 2 1126 0.0 1409
Msa0076290 MtrunA17_Chr1g0204981 40.078 1794 1006 18 112 1878 2 1753 0.0 1086
Msa0076290 MtrunA17_Chr5g0394641 35.033 1824 991 23 112 1904 2 1662 0.0 863
Msa0076290 MtrunA17_Chr5g0432781 75.862 87 21 0 118 204 16 102 5.89e-40 158
Msa0076290 MtrunA17_Chr5g0412211 58.120 117 43 1 123 239 10 120 2.77e-39 160
Msa0076290 MtrunA17_Chr8g0367521 50.427 117 52 1 123 239 10 120 5.38e-34 143
Msa0076290 MtrunA17_Chr5g0427501 56.000 100 44 0 123 222 10 109 1.22e-32 138
Msa0076290 MtrunA17_Chr7g0268631 54.945 91 38 2 124 211 53 143 1.71e-25 110
Msa0076290 MtrunA17_Chr3g0132861 32.222 360 169 15 132 460 14 329 3.52e-25 114
Msa0076290 MtrunA17_Chr1g0196081 52.174 92 43 1 109 199 1 92 4.36e-24 108
Msa0076290 MtrunA17_Chr3g0107891 41.912 136 64 4 146 279 15 137 1.09e-20 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0076290 AT1G03080.3 46.696 1801 868 18 116 1900 6 1730 0.0 1365
Msa0076290 AT1G03080.1 46.696 1801 868 18 116 1900 6 1730 0.0 1365
Msa0076290 AT1G03080.2 46.696 1801 868 18 116 1900 6 1730 0.0 1365
Msa0076290 AT3G22790.1 37.954 1818 1000 21 112 1898 2 1722 0.0 992
Msa0076290 AT3G22790.3 37.954 1818 1000 21 112 1898 2 1722 0.0 992
Msa0076290 AT3G22790.2 37.954 1818 1000 21 112 1898 2 1722 0.0 992
Msa0076290 AT4G14760.4 36.029 1818 1025 29 112 1902 2 1708 0.0 919
Msa0076290 AT4G14760.2 36.029 1818 1025 29 112 1902 2 1708 0.0 919
Msa0076290 AT4G14760.3 36.029 1818 1025 29 112 1902 2 1708 0.0 919
Msa0076290 AT4G14760.1 36.029 1818 1025 29 112 1902 2 1708 0.0 919
Msa0076290 AT4G02710.1 50.825 606 255 7 117 712 7 579 5.26e-174 560
Msa0076290 AT4G02710.1 29.762 840 412 29 1129 1900 379 1108 1.50e-54 210
Msa0076290 AT5G10500.1 44.118 170 76 5 123 280 10 172 2.53e-37 153
Msa0076290 AT2G22560.1 61.165 103 40 0 123 225 10 112 2.60e-37 154
Msa0076290 AT1G58215.1 35.135 259 136 5 123 381 10 236 1.75e-35 148
Msa0076290 AT2G30500.2 65.169 89 31 0 119 207 17 105 3.23e-35 143
Msa0076290 AT2G30500.1 65.169 89 31 0 119 207 17 105 3.23e-35 143
Msa0076290 AT2G30500.3 65.169 89 31 0 119 207 16 104 3.37e-35 143
Msa0076290 AT1G09720.1 32.676 355 178 11 123 470 10 310 1.76e-34 144
Msa0076290 AT5G58320.1 67.073 82 27 0 125 206 23 104 7.53e-32 133
Msa0076290 AT5G58320.4 67.073 82 27 0 125 206 23 104 7.53e-32 133
Msa0076290 AT5G58320.5 67.073 82 27 0 125 206 23 104 8.20e-32 133
Msa0076290 AT5G58320.2 67.073 82 27 0 125 206 23 104 8.20e-32 133
Msa0076290 AT1G03470.2 54.444 90 40 1 125 213 8 97 4.90e-25 107
Msa0076290 AT1G03470.3 54.444 90 40 1 125 213 8 97 4.90e-25 107
Msa0076290 AT1G03470.1 54.444 90 40 1 125 213 8 97 4.90e-25 107
Msa0076290 AT1G03470.4 54.444 90 40 1 125 213 8 97 4.90e-25 107
Msa0076290 AT2G47920.2 53.488 86 39 1 125 209 10 95 9.25e-25 105
Msa0076290 AT2G47920.1 53.488 86 39 1 125 209 10 95 9.25e-25 105
Msa0076290 AT5G58320.3 65.574 61 21 0 146 206 1 61 3.53e-19 93.2
Msa0076290 AT4G03153.1 37.179 78 44 2 125 197 7 84 3.34e-12 68.6

Find 363 sgRNAs with CRISPR-Local

Find 841 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCCTTCACGTACATTTC+TGG 0.115044 1_2:-52267964 Msa0076290:CDS
TGACAAAATTATTTCTAAAT+TGG 0.144547 1_2:-52265582 Msa0076290:CDS
CGTGAAGGGTGGCGTGTTTC+TGG 0.149213 1_2:+52267975 None:intergenic
CCGACTTTGATCGGCCATTT+TGG 0.177913 1_2:+52262921 None:intergenic
TTTGGCAAGGGCTTTCTTTA+AGG 0.184761 1_2:+52267665 None:intergenic
TCATTTCAGACTCCAATTTC+TGG 0.189196 1_2:+52264463 None:intergenic
TTTCAGTTGTGGCTTGTAAT+TGG 0.194109 1_2:+52266155 None:intergenic
ATAATCCCTTCCTTAATTTC+TGG 0.195001 1_2:-52262596 Msa0076290:three_prime_UTR
GCTTAGTTTCTTCAAGTTCT+TGG 0.200127 1_2:+52264430 None:intergenic
AACAGAAAATGAGGAGTTTA+AGG 0.201303 1_2:-52263659 Msa0076290:CDS
ATCTCAGTTGCAGGATTATC+TGG 0.222030 1_2:+52263636 None:intergenic
TGAACAGAAGTGTCTTCTTT+TGG 0.240171 1_2:-52266989 Msa0076290:CDS
CTCGGAAAATAACAACCTTT+TGG 0.259509 1_2:-52266119 Msa0076290:CDS
AGCAAGTTGGAAGGTGAAAA+TGG 0.270031 1_2:-52264189 Msa0076290:CDS
AAAGAAAGCCCTTGCCAAAT+TGG 0.283355 1_2:-52267661 Msa0076290:CDS
AATGCAAATGTTGAAGAGTT+TGG 0.285530 1_2:+52266809 None:intergenic
AGACAACAAGAGTAGGGTTT+TGG 0.287245 1_2:-52263331 Msa0076290:CDS
AGATGAGAAACTGGCTCTTT+TGG 0.288197 1_2:-52266356 Msa0076290:CDS
TTGCCTCTTCATGTCTTTCA+AGG 0.300216 1_2:-52269231 Msa0076290:CDS
AGTTGAGTGCCAGAGACTTT+TGG 0.300898 1_2:-52265621 Msa0076290:CDS
CTCTGCAATGCTCTTCCCTT+TGG 0.304252 1_2:+52265828 None:intergenic
GGAAACCATGGAGAAGCTTT+TGG 0.306581 1_2:-52266326 Msa0076290:CDS
AAGGGAGTCGTCACTTAAAA+AGG 0.310090 1_2:-52265879 Msa0076290:CDS
AATCACCAATACAATGAAAA+TGG 0.310983 1_2:-52263846 Msa0076290:CDS
ATGCATTAAACCAGAAATTA+AGG 0.311862 1_2:+52262586 None:intergenic
CGCTTCAAACTGCTCTTTAA+CGG 0.314327 1_2:+52263191 None:intergenic
CATACCTGATTGGTTGAACT+TGG 0.316379 1_2:+52269433 None:intergenic
TGATCAAGCATGATGTCTTT+TGG 0.316570 1_2:+52263603 None:intergenic
GACCAAGCTGTTTAAGTTCC+TGG 0.318841 1_2:+52264892 None:intergenic
CCTCCTCGTATTCTTGTTCC+CGG 0.321840 1_2:+52265732 None:intergenic
ACAGTCTGAATTACAGTCTT+TGG 0.323979 1_2:-52266947 Msa0076290:CDS
TAACGAGAAGCAGGAAGAAT+TGG 0.325127 1_2:-52266893 Msa0076290:CDS
TTTGTCCATACAAACTTTGC+AGG 0.326443 1_2:-52266629 Msa0076290:CDS
ATTCTAGGAGAATGTATTCT+TGG 0.328024 1_2:-52269141 Msa0076290:CDS
GCGCCCAGAGCTTATGAAAA+TGG 0.333667 1_2:-52268168 Msa0076290:CDS
ATCAATTTGTAATTCCTTGT+TGG 0.333975 1_2:+52265778 None:intergenic
TCTCATTTCAACATTGGCTT+TGG 0.334784 1_2:+52263707 None:intergenic
CTTGGAGACATTATCAAAAC+TGG 0.344415 1_2:-52267262 Msa0076290:CDS
TGATCCTCCTCTGCAGGTCT+TGG 0.345492 1_2:+52263769 None:intergenic
GCAGAAGTGTATCCAAGATT+TGG 0.357411 1_2:-52265666 Msa0076290:CDS
TGGCTCCAAGAAAATCTTAC+AGG 0.359859 1_2:-52269082 Msa0076290:intron
CGTTTGCGGGATTATCTCTA+TGG 0.360101 1_2:-52262892 Msa0076290:CDS
CTCGGTCTCATGCAGATTCT+AGG 0.361762 1_2:-52269156 Msa0076290:CDS
TGAATTGGAACTAATGCATT+TGG 0.362141 1_2:-52265915 Msa0076290:CDS
AGCACTTCAATCTCAGTTGC+AGG 0.363179 1_2:+52263627 None:intergenic
TCCTTGGTGGAAAAGGAGTT+GGG 0.363324 1_2:-52263402 Msa0076290:CDS
AAGTGAAGTGAACCAGAAAT+TGG 0.366159 1_2:-52264475 Msa0076290:CDS
TTCAGTTGTGGCTTGTAATT+GGG 0.366690 1_2:+52266156 None:intergenic
TTCTTTCTCTGAAAAGATAC+TGG 0.370651 1_2:+52266000 None:intergenic
TCTGCAATGCTCTTCCCTTT+GGG 0.370955 1_2:+52265829 None:intergenic
GTCTCATGGAATCGAAACTA+TGG 0.372633 1_2:+52262784 None:intergenic
AAAGAGCCACAACAACTTAC+AGG 0.374862 1_2:-52265081 Msa0076290:CDS
TTTCTTCATCAAATCTTGTA+TGG 0.375447 1_2:+52263263 None:intergenic
CTAATGCATTTGGAACTAAA+AGG 0.378484 1_2:-52265905 Msa0076290:CDS
CTGAGAAAATTAAAATACTA+AGG 0.379706 1_2:-52265517 Msa0076290:CDS
CAAATTAGAAAGTGAAGAAA+TGG 0.382537 1_2:-52264805 Msa0076290:CDS
GGCCTTACACATGCACAAAA+AGG 0.383586 1_2:+52262832 None:intergenic
TGAAAAGCAACACAGTGAAT+TGG 0.385151 1_2:-52265930 Msa0076290:CDS
TAAGGCCGAAATTTCTGCTT+CGG 0.386910 1_2:+52267683 None:intergenic
AAGCAAAGAGAAAACCAAAA+TGG 0.387448 1_2:-52262935 Msa0076290:CDS
AGAGCAGTTTGAAGCGTCTC+AGG 0.388830 1_2:-52263184 Msa0076290:CDS
CTCAGCATTCAAGTCTGAAA+TGG 0.388959 1_2:+52266279 None:intergenic
ATCATCACAGGAATTTGATT+AGG 0.395077 1_2:+52268047 None:intergenic
GAATGATTGTGTTACATCTC+TGG 0.397164 1_2:-52264118 Msa0076290:CDS
ACAGAAGATTGCGGCAGAAC+CGG 0.397763 1_2:-52263487 Msa0076290:CDS
GTCTTGTTCAAAGCAGAATT+CGG 0.399021 1_2:+52267879 None:intergenic
AAGTCGGAGAGTACGTTTGC+GGG 0.402704 1_2:-52262905 Msa0076290:CDS
CAGAAATCAATCACCCTTAG+TGG 0.404390 1_2:+52262807 None:intergenic
AAAGGTATTGGAAAAGAATC+AGG 0.405822 1_2:-52265195 Msa0076290:CDS
CACAATAAAGTGGAAATCCT+AGG 0.408167 1_2:-52266745 Msa0076290:CDS
ATCAATTGACTTGTCAGATT+AGG 0.409144 1_2:-52264713 Msa0076290:CDS
CTCATCCTGCAAAGTTTGTA+TGG 0.410946 1_2:+52266624 None:intergenic
AATAGAGTTCCAAAAGGTAT+TGG 0.411187 1_2:-52265207 Msa0076290:CDS
AAAAGCCGAAGCAGAAATTT+CGG 0.411401 1_2:-52267688 Msa0076290:CDS
GATTTAGATCCACAGTGCTT+TGG 0.411729 1_2:-52266442 Msa0076290:CDS
AGTCAGCGGCAAGAGCTCTA+AGG 0.412485 1_2:+52266770 None:intergenic
GTCAATGAAACACTGCTTCA+AGG 0.413357 1_2:-52264303 Msa0076290:CDS
GATGTGGTGAACCATGCTTT+TGG 0.413673 1_2:-52274594 Msa0076290:CDS
AATAAATGAGATTGAACAAT+GGG 0.414358 1_2:-52264370 Msa0076290:CDS
TAAGTCCCAAGAACTCAAAA+TGG 0.415777 1_2:-52269102 Msa0076290:CDS
AGGAGATTCCTTGGTGGAAA+AGG 0.418420 1_2:-52263409 Msa0076290:CDS
TGTCAGCAGGAGGAGAGTTT+CGG 0.420215 1_2:-52263052 Msa0076290:CDS
AGCTGAAGTTCAAGACTTGA+AGG 0.422558 1_2:-52267511 Msa0076290:CDS
AATCCGAGGAGAAAGTTAGA+AGG 0.427302 1_2:-52267224 Msa0076290:CDS
ACATTTGCATTCTCAATCTC+AGG 0.428623 1_2:-52266797 Msa0076290:CDS
AAATCCAAGTTCAACCAATC+AGG 0.429129 1_2:-52269437 Msa0076290:intron
ATATCTGAATGTTCATCATA+TGG 0.430778 1_2:-52263579 Msa0076290:CDS
ATGTTTGTTGTATGTTTCCT+TGG 0.431712 1_2:+52263437 None:intergenic
GGTCCTTGTCTGAGGACAAT+TGG 0.433769 1_2:+52264523 None:intergenic
CTTGGAGATACTTTCCAGTC+TGG 0.433996 1_2:-52267094 Msa0076290:CDS
CAGCAAAGAGTTCTGCAGCC+TGG 0.434765 1_2:+52264343 None:intergenic
CTTGGAGAAAATAACAGATC+TGG 0.436503 1_2:-52267430 Msa0076290:CDS
GGAGGACAGATTGAAGATAA+TGG 0.437055 1_2:-52264832 Msa0076290:CDS
AGCAAAGAGTTCTGCAGCCT+GGG 0.440991 1_2:+52264344 None:intergenic
ACAAGAATACGAGGAGGAAC+TGG 0.441470 1_2:-52265726 Msa0076290:CDS
TCATTCAAAGCACTGATAGC+TGG 0.441799 1_2:+52264135 None:intergenic
GACAATAGAGAAACTTGAAC+AGG 0.441947 1_2:-52266584 Msa0076290:CDS
ATAGTACATTTCCGCTCTCC+TGG 0.442846 1_2:+52268196 None:intergenic
AATCTTGTATGGTTATTTGA+AGG 0.446085 1_2:+52263274 None:intergenic
CCCTCTTAGTACATCAAGTT+CGG 0.447589 1_2:+52266072 None:intergenic
TGAAGATCTGAGTGAGGAGA+AGG 0.448143 1_2:-52265009 Msa0076290:CDS
ACATACAACAAACATCCTTC+AGG 0.449082 1_2:-52263429 Msa0076290:CDS
GAGGGTGCACTGTCTTCAGC+TGG 0.450914 1_2:-52263108 Msa0076290:CDS
CCATATACATGGAAAACTTA+AGG 0.454021 1_2:-52265405 Msa0076290:CDS
CGAGAACATGCAAAGTTTGA+AGG 0.456022 1_2:-52267822 Msa0076290:CDS
ACTAAGGGTTGGGCTGCATC+AGG 0.456344 1_2:-52265501 Msa0076290:CDS
TGTTCAATATAAACAATGCT+TGG 0.458659 1_2:-52267280 Msa0076290:CDS
TGGATGCCTCCAAAAGTCTC+TGG 0.460089 1_2:+52265612 None:intergenic
GGTGTTCAACTCTGAAACTA+AGG 0.460564 1_2:+52265976 None:intergenic
ACAGTCTTTGGCACACAAGA+TGG 0.460791 1_2:-52266935 Msa0076290:CDS
AATCTCTCTCATTTCAACAT+TGG 0.461008 1_2:+52263701 None:intergenic
TGGAAGTCGAGGAGAGGATC+TGG 0.462169 1_2:+52263789 None:intergenic
TTCCTTGGTGGAAAAGGAGT+TGG 0.465144 1_2:-52263403 Msa0076290:CDS
TCTTCAGTACCAGGAATGCT+TGG 0.465314 1_2:-52267448 Msa0076290:CDS
AAGGGACATGTTGTGTCAAA+AGG 0.465459 1_2:-52264685 Msa0076290:CDS
AGAAATTTACTGTCTTAAAG+AGG 0.466254 1_2:-52266521 Msa0076290:CDS
TTCAGACTTGAATGCTGAGT+TGG 0.467174 1_2:-52266275 Msa0076290:CDS
TTCATCCTCCAATTTGGCAA+GGG 0.468244 1_2:+52267653 None:intergenic
ACGTACTCTCCGACTTTGAT+CGG 0.469466 1_2:+52262912 None:intergenic
GAGAGATATGATCATGCAAC+TGG 0.470348 1_2:-52268110 Msa0076290:CDS
AAGCAAAGGAGAAGAGAGAA+TGG 0.471002 1_2:-52265156 Msa0076290:CDS
TGAAGTTGAGTCTTTGAAGC+AGG 0.472271 1_2:-52267340 Msa0076290:CDS
TGCCAAATTGGAGGATGAAA+AGG 0.472473 1_2:-52267649 Msa0076290:CDS
CTCTTTAACGGTATCATACT+CGG 0.473317 1_2:+52263203 None:intergenic
TTTCATCCTCCAATTTGGCA+AGG 0.473728 1_2:+52267652 None:intergenic
TTTCATTGATCCTCCTCTGC+AGG 0.474372 1_2:+52263763 None:intergenic
TTTACCAATGGTTACTTCCA+TGG 0.474662 1_2:-52268015 Msa0076290:CDS
ATTTCTCCACAAGCAGAGAC+TGG 0.475100 1_2:+52266212 None:intergenic
AGAACTCTTTGCTGAACTGC+AGG 0.476323 1_2:-52264334 Msa0076290:CDS
ATGTGTAAGGCCACCCACTA+AGG 0.476331 1_2:-52262821 Msa0076290:CDS
TCTCTGGAGATGCAGACTCT+TGG 0.476423 1_2:-52264102 Msa0076290:CDS
ACAAGATTTGATGAAGAAAG+TGG 0.476941 1_2:-52263259 Msa0076290:CDS
TGATCATATGCTTGAGTTGT+GGG 0.477759 1_2:-52263526 Msa0076290:CDS
TGAACAAAATTCTGATATGC+TGG 0.478725 1_2:+52269484 None:intergenic
CAATGGAGGCCGTGGCACTA+AGG 0.478761 1_2:-52267742 Msa0076290:CDS
TTGCTCTTCAAGTTTCCCCT+TGG 0.479611 1_2:+52264560 None:intergenic
AACGAGAAGCAGGAAGAATT+GGG 0.480291 1_2:-52266892 Msa0076290:CDS
GAAAGAATTAGTTAGCAAGT+TGG 0.480981 1_2:-52264202 Msa0076290:CDS
AAATTAAAATACTAAGGGTT+GGG 0.482199 1_2:-52265511 Msa0076290:CDS
TGAAGAACTTAACGAGAAGC+AGG 0.482220 1_2:-52266902 Msa0076290:CDS
TACTTCATTCTTATTACAGA+TGG 0.482398 1_2:-52274708 Msa0076290:CDS
CTTGTCAGATTAGGAATGAA+AGG 0.482780 1_2:-52264704 Msa0076290:CDS
AAGCTATGATCGACGAGGTC+AGG 0.482794 1_2:-52266471 Msa0076290:CDS
TCGCAATCTCTCCTCTTGTA+AGG 0.483536 1_2:+52266855 None:intergenic
TGAAATCGAAGCTTTGAAGT+TGG 0.483795 1_2:-52267172 Msa0076290:CDS
GAAAAGAGCACCACCTTTGT+CGG 0.483859 1_2:+52274671 None:intergenic
AAAATTAAAATACTAAGGGT+TGG 0.484576 1_2:-52265512 Msa0076290:CDS
TTTCTTCAAGTTCTTGGTGT+AGG 0.485996 1_2:+52264436 None:intergenic
TCATCAGAATCAGATGAGAT+TGG 0.487254 1_2:-52263078 Msa0076290:CDS
GGAGAATGTATTCTTGGTGG+TGG 0.490065 1_2:-52269135 Msa0076290:CDS
GCAAGTTGGAAGGTGAAAAT+GGG 0.490099 1_2:-52264188 Msa0076290:CDS
AGGAAGAATTGGGTAAACTT+TGG 0.491520 1_2:-52266882 Msa0076290:CDS
ACATCCTTCAGGAGATTCCT+TGG 0.492799 1_2:-52263418 Msa0076290:CDS
AATCAAAATACAGGCGGAAA+GGG 0.493030 1_2:-52267481 Msa0076290:CDS
TTTGGTAAAATTGGAAACCA+TGG 0.493770 1_2:-52266338 Msa0076290:CDS
TTGAGTTCTTGGGACTTATG+TGG 0.494173 1_2:+52269107 None:intergenic
GGTTTCTCTATATTCCCAAA+GGG 0.496528 1_2:-52265843 Msa0076290:CDS
TCCACAGTGCTTTGGCTCAT+CGG 0.497368 1_2:-52266434 Msa0076290:CDS
ACCGAACTTGATGTACTAAG+AGG 0.498597 1_2:-52266073 Msa0076290:CDS
TTATCTTCAATCTGTCCTCC+AGG 0.499024 1_2:+52264835 None:intergenic
CGCTGACTTTCACAATAAAG+TGG 0.499651 1_2:-52266755 Msa0076290:CDS
ATCAACTCTTGCTGCTGAGA+AGG 0.501753 1_2:-52266191 Msa0076290:CDS
CATTCAAAGCACTGATAGCT+GGG 0.502438 1_2:+52264136 None:intergenic
GTATCCAAGATTTGGAGAAA+AGG 0.502936 1_2:-52265658 Msa0076290:CDS
GAACGAATGTCTCGTGGGAC+AGG 0.503530 1_2:+52264961 None:intergenic
TTGGAGGATGAAAAGGAAGC+TGG 0.504217 1_2:-52267642 Msa0076290:CDS
AATTCTGCTTTGAACAAGAC+AGG 0.506819 1_2:-52267876 Msa0076290:CDS
GTTCATCATATGGAGTAAGC+AGG 0.507177 1_2:-52263569 Msa0076290:CDS
AAAGTCTCTGGCACTCAACT+AGG 0.508091 1_2:+52265624 None:intergenic
TTTGGAACTAAAAGGAGAAA+GGG 0.508114 1_2:-52265897 Msa0076290:CDS
CGGTGATGGCGACGGCGACT+CGG 0.508158 1_2:-52269174 Msa0076290:CDS
AATCCTTCTAACTTTCTCCT+CGG 0.509837 1_2:+52267221 None:intergenic
CTTTGACGACGATCTTCTGC+CGG 0.509963 1_2:+52263468 None:intergenic
GTTTGAAGGGCATGCTCGAA+GGG 0.510650 1_2:-52267808 Msa0076290:CDS
ATGAGATTGGAAGTGTCAGC+AGG 0.511099 1_2:-52263065 Msa0076290:CDS
GTATATGGTTCAGGAGAGTT+CGG 0.512260 1_2:+52265420 None:intergenic
ATTTGGAACTAAAAGGAGAA+AGG 0.513777 1_2:-52265898 Msa0076290:CDS
TCAATGAAACACTGCTTCAA+GGG 0.516063 1_2:-52264302 Msa0076290:CDS
CTTCTCCAAAAGCTTCTCCA+TGG 0.516457 1_2:+52266321 None:intergenic
GACCGTCAAAATGAAGAGCT+TGG 0.516532 1_2:-52264504 Msa0076290:CDS
AGATGAAGATCAATCTGTTA+CGG 0.516564 1_2:-52263814 Msa0076290:CDS
GGAAGCGGTAATCAAAATAC+AGG 0.517157 1_2:-52267490 Msa0076290:CDS
CACCACATCAATCTTGATGA+AGG 0.518309 1_2:+52274608 None:intergenic
GTCTTAAAGCATCTATAGAA+AGG 0.518320 1_2:+52262736 None:intergenic
ACTATTGAGAAGAGTACAAA+GGG 0.519100 1_2:-52263234 Msa0076290:CDS
GAGTGAGGAGAAGGGTAACT+TGG 0.520153 1_2:-52265000 Msa0076290:CDS
CTCCAGGAACTTAAACAGCT+TGG 0.521410 1_2:-52264894 Msa0076290:CDS
ATTTCTGGTTCACTTCACTT+AGG 0.521928 1_2:+52264478 None:intergenic
CTAGGAGAATGTATTCTTGG+TGG 0.522313 1_2:-52269138 Msa0076290:CDS
TTGCATGTTCTCGAGGGATG+AGG 0.522687 1_2:+52267832 None:intergenic
GAAGATCTGAGTGAGGAGAA+GGG 0.523252 1_2:-52265008 Msa0076290:CDS
TGAAAGAAGATGCAAAGTGC+CGG 0.523437 1_2:-52265751 Msa0076290:CDS
AATAGGACAACTTCAGTTGG+AGG 0.523913 1_2:-52263004 Msa0076290:CDS
AAGATGCAGATTCCTTTGCC+AGG 0.529544 1_2:-52268214 Msa0076290:CDS
GCAAAATTTCCCCAAAAGCA+TGG 0.529806 1_2:+52274583 None:intergenic
CACTTTATTGTGAAAGTCAG+CGG 0.530065 1_2:+52266756 None:intergenic
GAGAATTATCAAAGAGTCGA+TGG 0.530102 1_2:-52267552 Msa0076290:CDS
TGTTCGAGTAGAATCTGAAA+AGG 0.530320 1_2:-52267313 Msa0076290:CDS
CTCTTGTTGTCTTCTTCACG+TGG 0.530973 1_2:+52263342 None:intergenic
TCAAACTTTGCATGTTCTCG+AGG 0.532172 1_2:+52267825 None:intergenic
GAGGATCAATGAAATTTCAA+TGG 0.535025 1_2:-52263754 Msa0076290:CDS
CAAACTTTGCATGTTCTCGA+GGG 0.536244 1_2:+52267826 None:intergenic
CAGTCTTTGGCACACAAGAT+GGG 0.537044 1_2:-52266934 Msa0076290:CDS
TTGAAGACTCTTGACATTCA+CGG 0.537474 1_2:-52265476 Msa0076290:CDS
AGAGAGTTTATGTTCCAGAC+TGG 0.538887 1_2:+52267080 None:intergenic
TATGTGATTCGACATTCCCT+AGG 0.539614 1_2:+52266728 None:intergenic
GAAAGAAGATGCAAAGTGCC+GGG 0.539689 1_2:-52265750 Msa0076290:CDS
AAAGAATCAGGAGTTGAAGT+TGG 0.539926 1_2:-52265183 Msa0076290:CDS
TTTCAAGGAAAGCCACCACT+TGG 0.540917 1_2:-52265357 Msa0076290:CDS
TTCATTCTTATTACAGATGG+TGG 0.541575 1_2:-52274705 Msa0076290:CDS
ATTCTTCACCAGCTTGCGGT+TGG 0.543654 1_2:+52263137 None:intergenic
AATCCTTGAAAGACATGAAG+AGG 0.543702 1_2:+52269228 None:intergenic
TTTGCAAGAAGAGGCTAGGA+TGG 0.543818 1_2:-52262665 Msa0076290:three_prime_UTR
TAAACTCTCTTGTGCTGAAG+AGG 0.543918 1_2:-52267067 Msa0076290:CDS
GAGAACTTGACGAGGAGTCC+AGG 0.544082 1_2:-52265259 Msa0076290:CDS
GTCTCCATGGAAGTAACCAT+TGG 0.546135 1_2:+52268011 None:intergenic
TTATAGGGCATACCGTGCAT+TGG 0.546838 1_2:-52268135 Msa0076290:CDS
AGGAGATTGAACAGAAAATG+AGG 0.547317 1_2:-52263668 Msa0076290:CDS
GAGAGAGATTCAAGAAGCAA+AGG 0.548343 1_2:-52263688 Msa0076290:CDS
CTACATTCTTCACCAGCTTG+CGG 0.548502 1_2:+52263133 None:intergenic
CAGAGGAAAAGTAAATGTGT+TGG 0.551361 1_2:-52266245 Msa0076290:CDS
AGTACGTGGCTCTGTCTCCA+TGG 0.551953 1_2:+52267998 None:intergenic
AGTTTGAAGGGCATGCTCGA+AGG 0.552929 1_2:-52267809 Msa0076290:CDS
GAAAGCCCTTGCCAAATTGG+AGG 0.554029 1_2:-52267658 Msa0076290:CDS
AACATGCCAGTCTCTGCTTG+TGG 0.554765 1_2:-52266218 Msa0076290:CDS
TGAAACACTGCTTCAAGGGA+AGG 0.555869 1_2:-52264298 Msa0076290:CDS
TCGTCAAAGAAGAGCATCCA+AGG 0.556762 1_2:-52263454 Msa0076290:CDS
TTTCCAATTGTCCTCAGACA+AGG 0.557165 1_2:-52264526 Msa0076290:CDS
AACTTGAAGAAACTAAGCTA+AGG 0.557889 1_2:-52264425 Msa0076290:CDS
AGCTACTCTTCTTCAGTACC+AGG 0.558355 1_2:-52267457 Msa0076290:CDS
AATCAGAACTGAATTCTCAA+TGG 0.559228 1_2:+52265334 None:intergenic
TACTAAACTTAATGAAGAGA+AGG 0.559579 1_2:-52267145 Msa0076290:CDS
CATTTCCGCTCTCCTGGCAA+AGG 0.561069 1_2:+52268202 None:intergenic
GAGCTAAACAATGGAGGCCG+TGG 0.561432 1_2:-52267750 Msa0076290:CDS
TAATCAAAATACAGGCGGAA+AGG 0.561897 1_2:-52267482 Msa0076290:CDS
TTGTCAGATTAGGAATGAAA+GGG 0.562439 1_2:-52264703 Msa0076290:CDS
CGGTTCAGAAAATAATAACC+TGG 0.562555 1_2:-52264853 Msa0076290:CDS
AATAGAACAGAAAGCGGTGA+TGG 0.562775 1_2:-52269188 Msa0076290:CDS
GGAGAGATTGCGATTCATTG+AGG 0.563227 1_2:-52266845 Msa0076290:CDS
GATTAGATATGATGATGCCA+AGG 0.563374 1_2:-52264577 Msa0076290:CDS
AGCATTGTTTATATTGAACA+AGG 0.564130 1_2:+52267283 None:intergenic
AAATCGTCTGTAATCATCAC+AGG 0.564387 1_2:+52268035 None:intergenic
GAGTGATCCGTCATGCTCAT+CGG 0.564535 1_2:-52268088 Msa0076290:CDS
TGGTTTCTCTATATTCCCAA+AGG 0.566371 1_2:-52265844 Msa0076290:CDS
ATTAAACCAGAAATTAAGGA+AGG 0.567831 1_2:+52262590 None:intergenic
CATCAATCTTGATGAAGGAA+AGG 0.568198 1_2:+52274613 None:intergenic
GAATAAATGAGATTGAACAA+TGG 0.568780 1_2:-52264371 Msa0076290:CDS
ATTGCAAATAGAGTTCCAAA+AGG 0.569956 1_2:-52265213 Msa0076290:CDS
CCTCATGTATTTGCAAGAAG+AGG 0.570845 1_2:-52262674 Msa0076290:three_prime_UTR
TTTCAGATTCTACTCGAACA+AGG 0.571543 1_2:+52267316 None:intergenic
TGAAAAGCTTGAGAAGCTCT+CGG 0.571597 1_2:-52266137 Msa0076290:CDS
TGAAGATGAAGTGGCCAACA+AGG 0.572143 1_2:-52265792 Msa0076290:CDS
TGTATTTGCAAGAAGAGGCT+AGG 0.572781 1_2:-52262669 Msa0076290:three_prime_UTR
ATTAGGAAATGCTTCAGCCA+TGG 0.574632 1_2:+52268064 None:intergenic
ACTTTGGAGTTCCTTACAAG+AGG 0.576282 1_2:-52266866 Msa0076290:CDS
GATACAGTCTAAGCAGTTCA+CGG 0.576419 1_2:-52265237 Msa0076290:CDS
GAAAACAGAATTGCAAAGAA+CGG 0.576863 1_2:-52264613 Msa0076290:CDS
CCAAAATGGCCGATCAAAGT+CGG 0.576997 1_2:-52262921 Msa0076290:CDS
AAAATTTGAAGATCTGAGTG+AGG 0.577153 1_2:-52265015 Msa0076290:CDS
ACTCTCCTGAACCATATACA+TGG 0.577550 1_2:-52265416 Msa0076290:CDS
TGAGAAAATTAAAATACTAA+GGG 0.577739 1_2:-52265516 Msa0076290:CDS
GGAAAAGTAAATGTGTTGGA+AGG 0.577807 1_2:-52266241 Msa0076290:CDS
GTCTCTGGCACTCAACTAGG+AGG 0.578682 1_2:+52265627 None:intergenic
ACAATAAAGTGGAAATCCTA+GGG 0.579404 1_2:-52266744 Msa0076290:CDS
GAATTAGTTAGCAAGTTGGA+AGG 0.579453 1_2:-52264198 Msa0076290:CDS
TTCCTTCATCAAGATTGATG+TGG 0.579687 1_2:-52274610 Msa0076290:CDS
GTTCGATGCCAACCGCAAGC+TGG 0.581375 1_2:-52263145 Msa0076290:CDS
TCCTTCAGGAGATTCCTTGG+TGG 0.582609 1_2:-52263415 Msa0076290:CDS
GGTCAAGAACTTGATAAGCT+CGG 0.584047 1_2:-52264873 Msa0076290:CDS
TATTCAAAAGCAAGATGATG+TGG 0.584365 1_2:-52265549 Msa0076290:CDS
ACTTCCAAGACCTGCAGAGG+AGG 0.584918 1_2:-52263773 Msa0076290:CDS
CATATCTCTCGGCCAATGCA+CGG 0.585936 1_2:+52268123 None:intergenic
ACTTGAAGAAACTAAGCTAA+GGG 0.587700 1_2:-52264424 Msa0076290:CDS
GATTACAGACGATTTACCAA+TGG 0.589018 1_2:-52268027 Msa0076290:CDS
GAGTCCAGAAATGTACGTGA+AGG 0.591537 1_2:+52267960 None:intergenic
AGACGAGAACTCAAAGCTGA+AGG 0.593652 1_2:-52266398 Msa0076290:CDS
TGTGTAAGGCCACCCACTAA+GGG 0.594039 1_2:-52262820 Msa0076290:CDS
GAGAATGTATTCTTGGTGGT+GGG 0.594656 1_2:-52269134 Msa0076290:CDS
TCTTCAATATCAGCAATGCT+TGG 0.596143 1_2:-52267112 Msa0076290:CDS
TTCATCATATGGAGTAAGCA+GGG 0.596850 1_2:-52263568 Msa0076290:CDS
GAACTGCTTAGACTGTATCC+TGG 0.596877 1_2:+52265241 None:intergenic
TCCACCAAGGAATCTCCTGA+AGG 0.599034 1_2:+52263414 None:intergenic
ATTAGATATGATGATGCCAA+GGG 0.599366 1_2:-52264576 Msa0076290:CDS
GAGAATAGTGAGCTAAACAA+TGG 0.599612 1_2:-52267759 Msa0076290:CDS
ACAGAAAGCGGTGATGGCGA+CGG 0.600586 1_2:-52269182 Msa0076290:CDS
CTAAGTTATGAAGTACATGA+AGG 0.600656 1_2:-52264393 Msa0076290:CDS
TAGATTGAACGAATGTCTCG+TGG 0.601109 1_2:+52264955 None:intergenic
GAAGTTGAATGAAGATGAAG+TGG 0.602243 1_2:-52265801 Msa0076290:CDS
AGTTCAAGACTTGAAGGAAG+CGG 0.602829 1_2:-52267505 Msa0076290:CDS
TTAAACCAGAAATTAAGGAA+GGG 0.603311 1_2:+52262591 None:intergenic
GGCAGTGAGACTTCCGACAA+AGG 0.604434 1_2:-52274684 Msa0076290:CDS
TACAACAATAGAACAGAAAG+CGG 0.606213 1_2:-52269194 Msa0076290:CDS
ACTCTCTTGTGCTGAAGAGG+AGG 0.606683 1_2:-52267064 Msa0076290:CDS
TGAAGAAGACAACAAGAGTA+GGG 0.607872 1_2:-52263337 Msa0076290:CDS
GAGAACATGCAAAGTTTGAA+GGG 0.608059 1_2:-52267821 Msa0076290:CDS
CCGTCATGCTCATCGGACCA+TGG 0.608652 1_2:-52268081 Msa0076290:CDS
AGTTGCATGATCATATCTCT+CGG 0.608938 1_2:+52268112 None:intergenic
CCGAACTTGATGTACTAAGA+GGG 0.609912 1_2:-52266072 Msa0076290:CDS
CCTTGGTGGAAAAGGAGTTG+GGG 0.610602 1_2:-52263401 Msa0076290:CDS
AGAAATCAATCACCCTTAGT+GGG 0.613247 1_2:+52262808 None:intergenic
TTTCTGGTTTAATGCATGTG+TGG 0.615030 1_2:-52262580 Msa0076290:three_prime_UTR
AGACATGAGCCTTAGTGCCA+CGG 0.616789 1_2:+52267733 None:intergenic
GTGAAGAAGACAACAAGAGT+AGG 0.617580 1_2:-52263338 Msa0076290:CDS
AATTCTCAATGGCCAAGTGG+TGG 0.618262 1_2:+52265345 None:intergenic
GAGGCACAAACATGTACAGA+AGG 0.618477 1_2:+52262693 None:intergenic
ACATGTATCAGCTAGCTCAA+AGG 0.618865 1_2:+52264275 None:intergenic
GGAGAGATTAAAAGAATCCG+AGG 0.620033 1_2:-52267238 Msa0076290:CDS
TCGACTTCCAAGACCTGCAG+AGG 0.620118 1_2:-52263776 Msa0076290:CDS
GCTGGTGAAGAATGTAGAAG+AGG 0.621692 1_2:-52263127 Msa0076290:CDS
AGGGTGCACTGTCTTCAGCT+GGG 0.621875 1_2:-52263107 Msa0076290:CDS
TCATATGGAGTAAGCAGGGG+AGG 0.622148 1_2:-52263564 Msa0076290:CDS
GCTGAGTTGGATAGTGTCAG+AGG 0.622351 1_2:-52266262 Msa0076290:CDS
CATAAACTACTCGAAAGACA+TGG 0.625322 1_2:-52264238 Msa0076290:CDS
CTGGTGAAGAATGTAGAAGA+GGG 0.626232 1_2:-52263126 Msa0076290:CDS
AACTATTGAGAAGAGTACAA+AGG 0.627089 1_2:-52263235 Msa0076290:CDS
TCTGCAGGTCTTGGAAGTCG+AGG 0.629376 1_2:+52263778 None:intergenic
AAAGTCGGAGAGTACGTTTG+CGG 0.631783 1_2:-52262906 Msa0076290:CDS
AGATTGGAAGTGTCAGCAGG+AGG 0.632038 1_2:-52263062 Msa0076290:CDS
GTGCTGAAGAGGAGGTGCGT+AGG 0.632311 1_2:-52267056 Msa0076290:CDS
ATCTTTCAGAATTTGCTGAG+TGG 0.633785 1_2:+52265955 None:intergenic
AATAGAGAAACTTGAACAGG+AGG 0.633802 1_2:-52266581 Msa0076290:CDS
ATGCACAGATATGGACGTCA+AGG 0.634287 1_2:-52268264 Msa0076290:intron
AGTCCAGAAATGTACGTGAA+GGG 0.635028 1_2:+52267961 None:intergenic
CTTGGTGGAAAAGGAGTTGG+GGG 0.636806 1_2:-52263400 Msa0076290:CDS
ATGATCATATGCTTGAGTTG+TGG 0.638104 1_2:-52263527 Msa0076290:CDS
CCTCTTCTTGCAAATACATG+AGG 0.639106 1_2:+52262674 None:intergenic
GTGTAAAGCATGAAACGTCT+TGG 0.641708 1_2:+52264641 None:intergenic
TGGCGTGTTTCTGGAGTACG+TGG 0.644024 1_2:+52267984 None:intergenic
TTGAAGTTGGCAATAAGCAA+AGG 0.644687 1_2:-52265170 Msa0076290:CDS
AGATTCCTTTGCCAGGAGAG+CGG 0.644786 1_2:-52268207 Msa0076290:CDS
CTGAATTCTCAATGGCCAAG+TGG 0.645914 1_2:+52265342 None:intergenic
GATTGAACAATGGGAAACCC+AGG 0.647429 1_2:-52264361 Msa0076290:CDS
GGCTTGTAATTGGGAAAACA+AGG 0.647839 1_2:+52266165 None:intergenic
CCAGAAATGTACGTGAAGGG+TGG 0.648595 1_2:+52267964 None:intergenic
TCTCTGGCACTCAACTAGGA+GGG 0.649901 1_2:+52265628 None:intergenic
TGAAGTGCACCGTGTCAATG+AGG 0.650046 1_2:-52266689 Msa0076290:CDS
TTGAAGGGCATGCTCGAAGG+GGG 0.652093 1_2:-52267806 Msa0076290:CDS
CCATGGTCCGATGAGCATGA+CGG 0.652603 1_2:+52268081 None:intergenic
TGATAAGACACAGAAGATTG+CGG 0.653033 1_2:-52263496 Msa0076290:CDS
AGGTCTTGGAAGTCGAGGAG+AGG 0.656348 1_2:+52263783 None:intergenic
AGATTGAACGAATGTCTCGT+GGG 0.658399 1_2:+52264956 None:intergenic
GGAGACATTATCAAAACTGG+AGG 0.662374 1_2:-52267259 Msa0076290:CDS
AATCAATCACCCTTAGTGGG+TGG 0.666883 1_2:+52262811 None:intergenic
TTTGAAGGGCATGCTCGAAG+GGG 0.668153 1_2:-52267807 Msa0076290:CDS
AGCGGTAATCAAAATACAGG+CGG 0.668798 1_2:-52267487 Msa0076290:CDS
GCATTGTTTATATTGAACAA+GGG 0.668847 1_2:+52267284 None:intergenic
AAATTCTAAGATAGACGATG+AGG 0.670513 1_2:-52267031 Msa0076290:CDS
AACAGAATTGCAAAGAACGG+CGG 0.672848 1_2:-52264610 Msa0076290:CDS
AGTGAGACTTCCGACAAAGG+TGG 0.673986 1_2:-52274681 Msa0076290:CDS
AGATCTCAAGAAGAATGTCA+CGG 0.675887 1_2:-52263365 Msa0076290:CDS
AATAGTGAGCTAAACAATGG+AGG 0.676496 1_2:-52267756 Msa0076290:CDS
TTCAGAAAATAATAACCTGG+AGG 0.680325 1_2:-52264850 Msa0076290:CDS
AAAGCTGAAGGAGACATGTG+AGG 0.682253 1_2:-52266386 Msa0076290:CDS
GTTTCGGAACAAGCGCAGAG+AGG 0.691187 1_2:-52263036 Msa0076290:CDS
TCATCATATGGAGTAAGCAG+GGG 0.695084 1_2:-52263567 Msa0076290:CDS
TGTGTGGATATACTTACAGT+GGG 0.695323 1_2:-52262564 Msa0076290:three_prime_UTR
TTGTAATTGGGAAAACAAGG+TGG 0.707343 1_2:+52266168 None:intergenic
ACCGATGAGCCAAAGCACTG+TGG 0.710024 1_2:+52266433 None:intergenic
GTGCCGGGAACAAGAATACG+AGG 0.714394 1_2:-52265735 Msa0076290:CDS
ATGTGTGGATATACTTACAG+TGG 0.727011 1_2:-52262565 Msa0076290:three_prime_UTR
TTAGATATGATGATGCCAAG+GGG 0.730033 1_2:-52264575 Msa0076290:CDS
CCGGGAACAAGAATACGAGG+AGG 0.762245 1_2:-52265732 Msa0076290:CDS
ACATGAAGCTATGATCGACG+AGG 0.772783 1_2:-52266476 Msa0076290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTAAAATTTAT+GGG + chr1_2:52263084-52263103 None:intergenic 0.0%
!!! ATATTTTTTTTTAAAATTTA+TGG + chr1_2:52263085-52263104 None:intergenic 0.0%
!! AGATTATTAAAATAAATTGA+CGG + chr1_2:52264456-52264475 None:intergenic 10.0%
!!! ATGATAATAATTTTCTTTTT+TGG - chr1_2:52264793-52264812 Msa0076290:CDS 10.0%
!!! ATTTTTAATAAATTTTTTGG+GGG - chr1_2:52265724-52265743 Msa0076290:CDS 10.0%
!!! ATTTTAATATTGCATTATTA+GGG - chr1_2:52265841-52265860 Msa0076290:CDS 10.0%
!!! ATTGATAATATAATTAAAGA+AGG - chr1_2:52267061-52267080 Msa0076290:CDS 10.0%
!!! TTTATTTTTTGTTTTTACTT+TGG + chr1_2:52267204-52267223 None:intergenic 10.0%
!!! TTATTTTTTTACTTTCATTT+TGG - chr1_2:52267380-52267399 Msa0076290:CDS 10.0%
!! AATAAAGTTAAATTCATTTG+AGG - chr1_2:52263884-52263903 Msa0076290:intron 15.0%
!!! TTTTTATTGGTCAAAAAAAA+TGG - chr1_2:52264063-52264082 Msa0076290:intron 15.0%
!! AAAATTAAATAAATACTGGT+AGG + chr1_2:52264370-52264389 None:intergenic 15.0%
!!! ATTTTTAACTTTGTTTTACA+TGG - chr1_2:52264897-52264916 Msa0076290:CDS 15.0%
!!! TCTATTCTTTAATTTTTTGA+AGG - chr1_2:52265059-52265078 Msa0076290:CDS 15.0%
!!! TTTAATTTTTTGAAGGAATA+GGG - chr1_2:52265066-52265085 Msa0076290:CDS 15.0%
!! TGATAATTGTAATTAAGTAT+TGG - chr1_2:52265528-52265547 Msa0076290:CDS 15.0%
!!! TTTTTAATAAATTTTTTGGG+GGG - chr1_2:52265725-52265744 Msa0076290:CDS 15.0%
!!! GATTTTAATATTGCATTATT+AGG - chr1_2:52265840-52265859 Msa0076290:CDS 15.0%
!! ATTAGCATTCAAAAAATTAT+AGG + chr1_2:52266348-52266367 None:intergenic 15.0%
!! AAAAAATTATTTGTGTTAGT+TGG + chr1_2:52266949-52266968 None:intergenic 15.0%
!! TTGGTATTAAAGATTATTAA+AGG + chr1_2:52267021-52267040 None:intergenic 15.0%
!!! AAATAATCAAAATTTTATGG+CGG + chr1_2:52267366-52267385 None:intergenic 15.0%
!!! TCATTTTCTATTGTATTTAT+TGG - chr1_2:52267726-52267745 Msa0076290:CDS 15.0%
!!! TGACAAAATTATTTCTAAAT+TGG - chr1_2:52271675-52271694 Msa0076290:intron 15.0%
!! TGAGAAAATTAAAATACTAA+GGG - chr1_2:52271741-52271760 Msa0076290:intron 15.0%
!!! ATGGTATATTTTTGGATTTT+TGG - chr1_2:52262702-52262721 Msa0076290:three_prime_UTR 20.0%
!!! TTGTTTTTCTCACTTTTTAT+TGG - chr1_2:52264050-52264069 Msa0076290:intron 20.0%
!!! TTTTGAAGTAGACTAATAAT+AGG - chr1_2:52264281-52264300 Msa0076290:CDS 20.0%
!! TGGGAAAATTAAATAAATAC+TGG + chr1_2:52264374-52264393 None:intergenic 20.0%
!! TTTACATGGATAAAATTCTA+CGG - chr1_2:52264911-52264930 Msa0076290:CDS 20.0%
!!! CTTTAATTTTTTGAAGGAAT+AGG - chr1_2:52265065-52265084 Msa0076290:CDS 20.0%
!!! TTAATTTTTTGAAGGAATAG+GGG - chr1_2:52265067-52265086 Msa0076290:CDS 20.0%
!!! AAAAAAAGTGTCTCTTTTAA+TGG - chr1_2:52265117-52265136 Msa0076290:CDS 20.0%
!!! CTAAGGTTTTTTGATAAATA+AGG - chr1_2:52265309-52265328 Msa0076290:CDS 20.0%
!! GTTCTTACGTAATATAATAA+TGG - chr1_2:52265380-52265399 Msa0076290:CDS 20.0%
!! ATTAAAAATAGATTCGATAG+AGG + chr1_2:52265713-52265732 None:intergenic 20.0%
!!! TTTTAATAAATTTTTTGGGG+GGG - chr1_2:52265726-52265745 Msa0076290:CDS 20.0%
!!! ATGGTAAAAACACTATTTTT+TGG - chr1_2:52266048-52266067 Msa0076290:CDS 20.0%
!!! TAAAAACACTATTTTTTGGA+CGG - chr1_2:52266052-52266071 Msa0076290:CDS 20.0%
!!! AATTCATTGTCATTTTATCT+AGG - chr1_2:52266562-52266581 Msa0076290:CDS 20.0%
!! TGACTAAAAATATTTACACT+TGG - chr1_2:52266610-52266629 Msa0076290:CDS 20.0%
!!! TTAACAAAAGTTGATGTTTT+TGG - chr1_2:52266686-52266705 Msa0076290:CDS 20.0%
!!! GATGTTTTTGGTTAAAAAAT+TGG - chr1_2:52266698-52266717 Msa0076290:CDS 20.0%
!! ATAATTGTATATGTTTCAGA+TGG + chr1_2:52266732-52266751 None:intergenic 20.0%
!! TAATTAGTACTATTTGTCAT+TGG + chr1_2:52267040-52267059 None:intergenic 20.0%
!!! TTGATTTACAAAAGTATGAT+GGG - chr1_2:52267660-52267679 Msa0076290:CDS 20.0%
!! AAAAAAAAAACATACCTGAT+TGG + chr1_2:52267837-52267856 None:intergenic 20.0%
!!! GTTTTTACATTAAACTTCAA+AGG - chr1_2:52268344-52268363 Msa0076290:intron 20.0%
!!! AGCATAATTTATTTTGTTGA+TGG - chr1_2:52268391-52268410 Msa0076290:intron 20.0%
!!! GCATAATTTATTTTGTTGAT+GGG - chr1_2:52268392-52268411 Msa0076290:intron 20.0%
!! TCAACATCTATAGTTATAAA+AGG + chr1_2:52268745-52268764 None:intergenic 20.0%
!! GTTTGTATTATATGAGTTAT+TGG - chr1_2:52268890-52268909 Msa0076290:intron 20.0%
!!! AATAATTTTGTCAGACATTT+TGG + chr1_2:52271668-52271687 None:intergenic 20.0%
!! CTGAGAAAATTAAAATACTA+AGG - chr1_2:52271740-52271759 Msa0076290:intron 20.0%
!! AAAATTAAAATACTAAGGGT+TGG - chr1_2:52271745-52271764 Msa0076290:intron 20.0%
!! AAATTAAAATACTAAGGGTT+GGG - chr1_2:52271746-52271765 Msa0076290:intron 20.0%
!! AATAAATGAGATTGAACAAT+GGG - chr1_2:52272887-52272906 Msa0076290:intron 20.0%
!! TAAAGAAAGGAAATAATAGT+TGG + chr1_2:52273332-52273351 None:intergenic 20.0%
!! CAAATTATATGCATAAAGAA+AGG + chr1_2:52273345-52273364 None:intergenic 20.0%
!! AAAAAGATGAGAAAAAGAAA+CGG + chr1_2:52274625-52274644 None:intergenic 20.0%
! TACTTCATTCTTATTACAGA+TGG - chr1_2:52262549-52262568 Msa0076290:three_prime_UTR 25.0%
!! TGCTTCTAATGGTATATTTT+TGG - chr1_2:52262694-52262713 Msa0076290:three_prime_UTR 25.0%
! ATCATTGAAAGAAAAAGATG+TGG - chr1_2:52262734-52262753 Msa0076290:three_prime_UTR 25.0%
! AGTTAGTAAGAGAACAAAAA+TGG - chr1_2:52262872-52262891 Msa0076290:CDS 25.0%
! TAAAATGAATTAGACCCAAT+AGG - chr1_2:52262906-52262925 Msa0076290:CDS 25.0%
! TCCATTTGGGTAAAAAAAAA+TGG - chr1_2:52262977-52262996 Msa0076290:CDS 25.0%
! TAAATTGAAGAAGAAAAGTG+TGG + chr1_2:52263157-52263176 None:intergenic 25.0%
! AAAAAAACCATAAAGTTGTG+AGG + chr1_2:52263348-52263367 None:intergenic 25.0%
! AAATCTTTAACCAATTTGAG+TGG - chr1_2:52263382-52263401 Msa0076290:CDS 25.0%
! AATCTTTAACCAATTTGAGT+GGG - chr1_2:52263383-52263402 Msa0076290:CDS 25.0%
! ATTTATAAAAACACAACACG+AGG + chr1_2:52263707-52263726 None:intergenic 25.0%
!!! TCGTGTTGTGTTTTTATAAA+TGG - chr1_2:52263706-52263725 Msa0076290:CDS 25.0%
! CAAAAAAAATGGAGAGAAAA+AGG - chr1_2:52264074-52264093 Msa0076290:CDS 25.0%
! AAATAAATACTGGTAGGAAT+TGG + chr1_2:52264364-52264383 None:intergenic 25.0%
! TTACATGGATAAAATTCTAC+GGG - chr1_2:52264912-52264931 Msa0076290:CDS 25.0%
! ACTATAAGCGAAAACAAATT+TGG + chr1_2:52264945-52264964 None:intergenic 25.0%
!!! TTTGTTTTCGCTTATAGTAA+TGG - chr1_2:52264947-52264966 Msa0076290:CDS 25.0%
!! TTGAGTCTTTTTCTTTTTGA+AGG - chr1_2:52265158-52265177 Msa0076290:CDS 25.0%
!! CTGACATATAAATTAGTCTA+AGG - chr1_2:52265292-52265311 Msa0076290:CDS 25.0%
!! TTTAGAGAAAAGTTAGTCTA+AGG - chr1_2:52265351-52265370 Msa0076290:CDS 25.0%
! AACTTTGACTCAATAAATGA+CGG - chr1_2:52265444-52265463 Msa0076290:CDS 25.0%
!!! TAATTAAGTATTGGCCTTTT+GGG - chr1_2:52265537-52265556 Msa0076290:CDS 25.0%
!! AAAAAAGAAAGAGCATAAAC+AGG + chr1_2:52265667-52265686 None:intergenic 25.0%
!!! TTATGCTCTTTCTTTTTTCA+AGG - chr1_2:52265669-52265688 Msa0076290:CDS 25.0%
!!! TTTAATAAATTTTTTGGGGG+GGG - chr1_2:52265727-52265746 Msa0076290:CDS 25.0%
! GGAAAATATATTGGATTGAT+TGG - chr1_2:52265763-52265782 Msa0076290:CDS 25.0%
! ATAGAGATAGTTTATGGTAT+AGG - chr1_2:52265889-52265908 Msa0076290:CDS 25.0%
! TAGAGATAGTTTATGGTATA+GGG - chr1_2:52265890-52265909 Msa0076290:CDS 25.0%
! GTATTTGGTATGTTTACTTT+AGG - chr1_2:52266152-52266171 Msa0076290:CDS 25.0%
! ACAATACTTCAAATATACTC+CGG - chr1_2:52266639-52266658 Msa0076290:CDS 25.0%
! TCTATCTATAAGACACATTT+AGG - chr1_2:52266663-52266682 Msa0076290:CDS 25.0%
! GTATATGTTTCATATGAATC+TGG + chr1_2:52266830-52266849 None:intergenic 25.0%
!!! TTTACTTTGGCTTTTGATTT+TGG + chr1_2:52267191-52267210 None:intergenic 25.0%
! ATGACACTAAATTTCATCAT+AGG - chr1_2:52267317-52267336 Msa0076290:CDS 25.0%
! AACTTAAGATCAAAGTTAAG+TGG + chr1_2:52267463-52267482 None:intergenic 25.0%
!! GTTGATTTACAAAAGTATGA+TGG - chr1_2:52267659-52267678 Msa0076290:CDS 25.0%
!!! CATTAATTTGTCCTATACTA+CGG + chr1_2:52268325-52268344 None:intergenic 25.0%
! ATACCTTAAAAGTTATTGTG+TGG - chr1_2:52268440-52268459 Msa0076290:intron 25.0%
!!! AAGATTTTAGAGTATTCGAA+TGG - chr1_2:52268483-52268502 Msa0076290:intron 25.0%
! AAGTATATTTCATCAATGTC+TGG - chr1_2:52268513-52268532 Msa0076290:intron 25.0%
! GACTTTATTAAGCTGTAATA+TGG - chr1_2:52268620-52268639 Msa0076290:intron 25.0%
!!! AGCATTTTTTTCAAAACTAC+CGG - chr1_2:52268654-52268673 Msa0076290:intron 25.0%
! ACGTAAAAAAAAAAAACACC+CGG + chr1_2:52268676-52268695 None:intergenic 25.0%
! AAATATCGTCATATCTTTCT+CGG + chr1_2:52268924-52268943 None:intergenic 25.0%
!!! AAATGGTTGAAGAGTTTTAT+AGG - chr1_2:52269106-52269125 Msa0076290:CDS 25.0%
!!! AATGGTTGAAGAGTTTTATA+GGG - chr1_2:52269107-52269126 Msa0076290:CDS 25.0%
!! GCTCATTTTATGAAAAGAAA+TGG - chr1_2:52269339-52269358 Msa0076290:intron 25.0%
!! AAATATTTCTTTTGCTCAGA+AGG - chr1_2:52269854-52269873 Msa0076290:intron 25.0%
! GCATTGTTTATATTGAACAA+GGG + chr1_2:52269976-52269995 None:intergenic 25.0%
! AGCATTGTTTATATTGAACA+AGG + chr1_2:52269977-52269996 None:intergenic 25.0%
! TGTTCAATATAAACAATGCT+TGG - chr1_2:52269977-52269996 Msa0076290:intron 25.0%
! TACTAAACTTAATGAAGAGA+AGG - chr1_2:52270112-52270131 Msa0076290:intron 25.0%
! AGAAATTTACTGTCTTAAAG+AGG - chr1_2:52270736-52270755 Msa0076290:intron 25.0%
!! CAAATAGTGAATTTTCCAAA+AGG + chr1_2:52271156-52271175 None:intergenic 25.0%
! ATCAATTTGTAATTCCTTGT+TGG + chr1_2:52271482-52271501 None:intergenic 25.0%
!!! GTTTTTCAGAGATAATATTC+TGG + chr1_2:52272344-52272363 None:intergenic 25.0%
! CAAATTAGAAAGTGAAGAAA+TGG - chr1_2:52272452-52272471 Msa0076290:intron 25.0%
! GAATAAATGAGATTGAACAA+TGG - chr1_2:52272886-52272905 Msa0076290:intron 25.0%
! TGACATATTGTTTCAGTATT+TGG - chr1_2:52273216-52273235 Msa0076290:intron 25.0%
!! TTTTCTTTTAATGTAATGCC+AGG - chr1_2:52273247-52273266 Msa0076290:intron 25.0%
! AAAATCATCAATAAATGACC+TGG + chr1_2:52273268-52273287 None:intergenic 25.0%
! AATCACCAATACAATGAAAA+TGG - chr1_2:52273411-52273430 Msa0076290:intron 25.0%
! ATATCTGAATGTTCATCATA+TGG - chr1_2:52273678-52273697 Msa0076290:intron 25.0%
! AATCTTGTATGGTTATTTGA+AGG + chr1_2:52273986-52274005 None:intergenic 25.0%
! TTTCTTCATCAAATCTTGTA+TGG + chr1_2:52273997-52274016 None:intergenic 25.0%
! TTAAACCAGAAATTAAGGAA+GGG + chr1_2:52274669-52274688 None:intergenic 25.0%
! ATTAAACCAGAAATTAAGGA+AGG + chr1_2:52274670-52274689 None:intergenic 25.0%
! ATGCATTAAACCAGAAATTA+AGG + chr1_2:52274674-52274693 None:intergenic 25.0%
TTCATTCTTATTACAGATGG+TGG - chr1_2:52262552-52262571 Msa0076290:three_prime_UTR 30.0%
!! TTAGGAGTTTTAATCACAGA+TGG - chr1_2:52262612-52262631 Msa0076290:three_prime_UTR 30.0%
TTGTTCTCTTACTAACTTGA+GGG + chr1_2:52262869-52262888 None:intergenic 30.0%
TTTGTTCTCTTACTAACTTG+AGG + chr1_2:52262870-52262889 None:intergenic 30.0%
AGTAAGAGAACAAAAATGGA+AGG - chr1_2:52262876-52262895 Msa0076290:CDS 30.0%
!!! TTTTTTTTACCCAAATGGAG+AGG + chr1_2:52262976-52262995 None:intergenic 30.0%
!!! GCCATTTTTTTTTACCCAAA+TGG + chr1_2:52262981-52263000 None:intergenic 30.0%
ACATGTCATGTTCTTATGAA+TGG + chr1_2:52263015-52263034 None:intergenic 30.0%
ATTCATAAGAACATGACATG+TGG - chr1_2:52263014-52263033 Msa0076290:CDS 30.0%
GTGGAAAAGTAAGATATCAA+TGG - chr1_2:52263033-52263052 Msa0076290:CDS 30.0%
TCAATTTATCCCTTCTTCAT+TGG - chr1_2:52263169-52263188 Msa0076290:CDS 30.0%
AATCTCTTTAAACAAGACAC+TGG - chr1_2:52263242-52263261 Msa0076290:CDS 30.0%
ATCTCTTTAAACAAGACACT+GGG - chr1_2:52263243-52263262 Msa0076290:CDS 30.0%
AAAAGATTCTTAAGTTCGTG+AGG + chr1_2:52263563-52263582 None:intergenic 30.0%
! ACGAACTTAAGAATCTTTTC+AGG - chr1_2:52263564-52263583 Msa0076290:CDS 30.0%
AATTTCTTACCCAAATAGAG+AGG - chr1_2:52263742-52263761 Msa0076290:CDS 30.0%
!! CATAATGGACTAAAATTCGA+TGG + chr1_2:52263851-52263870 None:intergenic 30.0%
!! CATCGAATTTTAGTCCATTA+TGG - chr1_2:52263849-52263868 Msa0076290:CDS 30.0%
!! GAATTTTAGTCCATTATGGA+GGG - chr1_2:52263853-52263872 Msa0076290:CDS 30.0%
! ATTACTCTTTTATGTGTGAC+TGG + chr1_2:52263989-52264008 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr1_2:52264025-52264044 None:intergenic 30.0%
TCCACATAAAAATAGATCAC+CGG - chr1_2:52264182-52264201 Msa0076290:CDS 30.0%
TACCTATTATTAGTCACTGT+TGG + chr1_2:52264252-52264271 None:intergenic 30.0%
AAAATCGATGACACTTGTTT+GGG + chr1_2:52264393-52264412 None:intergenic 30.0%
TCATGATTGAAAATCATGTG+AGG + chr1_2:52264416-52264435 None:intergenic 30.0%
AAAAATAGGGAAATGCTAAC+CGG - chr1_2:52264558-52264577 Msa0076290:CDS 30.0%
GATGCAAAAAGTTAAATGCT+CGG + chr1_2:52264589-52264608 None:intergenic 30.0%
AAAAATAGGGAAATGCTAAC+CGG - chr1_2:52264558-52264577 Msa0076290:CDS 30.0%
TAATATGCTTAACCAATGCT+CGG + chr1_2:52264699-52264718 None:intergenic 30.0%
!!! TCTTTTTTGGTATGCTTAAC+CGG - chr1_2:52264806-52264825 Msa0076290:CDS 30.0%
TACATGGATAAAATTCTACG+GGG - chr1_2:52264913-52264932 Msa0076290:CDS 30.0%
!!! GTAATTAAGTATTGGCCTTT+TGG - chr1_2:52265536-52265555 Msa0076290:CDS 30.0%
AGAGTTTATGCGCTTTATAA+GGG + chr1_2:52265566-52265585 None:intergenic 30.0%
TAGAGTTTATGCGCTTTATA+AGG + chr1_2:52265567-52265586 None:intergenic 30.0%
TAGACCACAGGAAAATATAT+TGG - chr1_2:52265754-52265773 Msa0076290:CDS 30.0%
! CAATCCAATATATTTTCCTG+TGG + chr1_2:52265761-52265780 None:intergenic 30.0%
TTGATTGGCAAACTATTTGT+CGG - chr1_2:52265778-52265797 Msa0076290:CDS 30.0%
ATATTGCATTATTAGGGAAG+TGG - chr1_2:52265847-52265866 Msa0076290:CDS 30.0%
!!! TATTTTTTGGACGGATGTTT+GGG - chr1_2:52266061-52266080 Msa0076290:CDS 30.0%
TTGGTATGTTTACTTTAGGT+TGG - chr1_2:52266156-52266175 Msa0076290:CDS 30.0%
! TGGTATGTTTACTTTAGGTT+GGG - chr1_2:52266157-52266176 Msa0076290:CDS 30.0%
!! TTTGATGATCAGTTTTGTGT+TGG - chr1_2:52266506-52266525 Msa0076290:CDS 30.0%
ATGTGTCTTATAGATAGAAC+CGG + chr1_2:52266661-52266680 None:intergenic 30.0%
TGAATGTATCAGGTTTGTAT+TGG + chr1_2:52266904-52266923 None:intergenic 30.0%
!!! CTTTTTTAGGTGAATGTATC+AGG + chr1_2:52266914-52266933 None:intergenic 30.0%
TTATTTGTGTTAGTTGGACT+TGG + chr1_2:52266943-52266962 None:intergenic 30.0%
AGGTTACAAGTCAAATTCAA+AGG + chr1_2:52267001-52267020 None:intergenic 30.0%
ATTGTATTTATTGGACGATC+AGG - chr1_2:52267735-52267754 Msa0076290:CDS 30.0%
TGAACAAAATTCTGATATGC+TGG + chr1_2:52267776-52267795 None:intergenic 30.0%
! GAATTTTGTTCATTCAGCTT+TGG - chr1_2:52267784-52267803 Msa0076290:CDS 30.0%
TCTCAAATTGATTGATCTGA+AGG + chr1_2:52267868-52267887 None:intergenic 30.0%
TACAACAATAGAACAGAAAG+CGG - chr1_2:52268063-52268082 Msa0076290:CDS 30.0%
! ATTCTAGGAGAATGTATTCT+TGG - chr1_2:52268116-52268135 Msa0076290:CDS 30.0%
! CATTACCTGTAAGATTTTCT+TGG + chr1_2:52268183-52268202 None:intergenic 30.0%
! TGTTTTCTTATCCGTAGTAT+AGG - chr1_2:52268311-52268330 Msa0076290:intron 30.0%
! TTAAGGTATCATAGCAATCT+CGG + chr1_2:52268429-52268448 None:intergenic 30.0%
! CTTCCACACAATAACTTTTA+AGG + chr1_2:52268446-52268465 None:intergenic 30.0%
AATCTGTTTCAGTTTCACTT+TGG - chr1_2:52268562-52268581 Msa0076290:intron 30.0%
!!! GCATTTTTTTCAAAACTACC+GGG - chr1_2:52268655-52268674 Msa0076290:intron 30.0%
TATCATTGAGATAAGTTCAG+AGG + chr1_2:52268966-52268985 None:intergenic 30.0%
ATCATCACAGGAATTTGATT+AGG + chr1_2:52269213-52269232 None:intergenic 30.0%
!! AAATTCTAAGATAGACGATG+AGG - chr1_2:52270226-52270245 Msa0076290:intron 30.0%
AATGCAAATGTTGAAGAGTT+TGG + chr1_2:52270451-52270470 None:intergenic 30.0%
ACAATAAAGTGGAAATCCTA+GGG - chr1_2:52270513-52270532 Msa0076290:intron 30.0%
!!! TTTTGTTTTCCTCATTGACA+CGG + chr1_2:52270580-52270599 None:intergenic 30.0%
TTTGGTAAAATTGGAAACCA+TGG - chr1_2:52270919-52270938 Msa0076290:intron 30.0%
! AAAAGATACTGGACTTTTCA+TGG + chr1_2:52271249-52271268 None:intergenic 30.0%
! TTCTTTCTCTGAAAAGATAC+TGG + chr1_2:52271260-52271279 None:intergenic 30.0%
TGAATTGGAACTAATGCATT+TGG - chr1_2:52271342-52271361 Msa0076290:intron 30.0%
! CTAATGCATTTGGAACTAAA+AGG - chr1_2:52271352-52271371 Msa0076290:intron 30.0%
! ATTTGGAACTAAAAGGAGAA+AGG - chr1_2:52271359-52271378 Msa0076290:intron 30.0%
! TTTGGAACTAAAAGGAGAAA+GGG - chr1_2:52271360-52271379 Msa0076290:intron 30.0%
TATTCAAAAGCAAGATGATG+TGG - chr1_2:52271708-52271727 Msa0076290:intron 30.0%
! CCTTAAGTTTTCCATGTATA+TGG + chr1_2:52271855-52271874 None:intergenic 30.0%
CCATATACATGGAAAACTTA+AGG - chr1_2:52271852-52271871 Msa0076290:intron 30.0%
AATCAGAACTGAATTCTCAA+TGG + chr1_2:52271926-52271945 None:intergenic 30.0%
ATTGCAAATAGAGTTCCAAA+AGG - chr1_2:52272044-52272063 Msa0076290:intron 30.0%
! AATAGAGTTCCAAAAGGTAT+TGG - chr1_2:52272050-52272069 Msa0076290:intron 30.0%
! GATTCTTTTCCAATACCTTT+TGG + chr1_2:52272062-52272081 None:intergenic 30.0%
!! AAAGGTATTGGAAAAGAATC+AGG - chr1_2:52272062-52272081 Msa0076290:intron 30.0%
!!! TTTTTTCCTGTAAGTTGTTG+TGG + chr1_2:52272185-52272204 None:intergenic 30.0%
! ATCTTCAAATTTTCCCAACA+AGG + chr1_2:52272235-52272254 None:intergenic 30.0%
AAAATTTGAAGATCTGAGTG+AGG - chr1_2:52272242-52272261 Msa0076290:intron 30.0%
! TATTATCTCTGAAAAACTCC+AGG - chr1_2:52272347-52272366 Msa0076290:intron 30.0%
TTCAGAAAATAATAACCTGG+AGG - chr1_2:52272407-52272426 Msa0076290:intron 30.0%
!! ATCAATTGACTTGTCAGATT+AGG - chr1_2:52272544-52272563 Msa0076290:intron 30.0%
TTGTCAGATTAGGAATGAAA+GGG - chr1_2:52272554-52272573 Msa0076290:intron 30.0%
!! TCAAAAGGAAAAAGTGCTTT+CGG - chr1_2:52272587-52272606 Msa0076290:intron 30.0%
! TCTTTGCAATTCTGTTTTCT+CGG + chr1_2:52272643-52272662 None:intergenic 30.0%
GAAAACAGAATTGCAAAGAA+CGG - chr1_2:52272644-52272663 Msa0076290:intron 30.0%
! ATTAGATATGATGATGCCAA+GGG - chr1_2:52272681-52272700 Msa0076290:intron 30.0%
AACTTGAAGAAACTAAGCTA+AGG - chr1_2:52272832-52272851 Msa0076290:intron 30.0%
ACTTGAAGAAACTAAGCTAA+GGG - chr1_2:52272833-52272852 Msa0076290:intron 30.0%
CTAAGTTATGAAGTACATGA+AGG - chr1_2:52272864-52272883 Msa0076290:intron 30.0%
GAAAGAATTAGTTAGCAAGT+TGG - chr1_2:52273055-52273074 Msa0076290:intron 30.0%
AAACAATATGTCAATACCTC+TGG + chr1_2:52273209-52273228 None:intergenic 30.0%
!! ATTGATGATTTTGTGACGAA+AGG - chr1_2:52273276-52273295 Msa0076290:intron 30.0%
!! TTGATGATTTTGTGACGAAA+GGG - chr1_2:52273277-52273296 Msa0076290:intron 30.0%
TAGTTGGTTACAAGTAGAAA+AGG + chr1_2:52273316-52273335 None:intergenic 30.0%
! CCAAATTTTTAACCTGGAAA+TGG + chr1_2:52273389-52273408 None:intergenic 30.0%
CCATTTCCAGGTTAAAAATT+TGG - chr1_2:52273386-52273405 Msa0076290:intron 30.0%
! GATTCACCAAATTTTTAACC+TGG + chr1_2:52273395-52273414 None:intergenic 30.0%
! GTTGACCATTTTCATTGTAT+TGG + chr1_2:52273419-52273438 None:intergenic 30.0%
AGATGAAGATCAATCTGTTA+CGG - chr1_2:52273443-52273462 Msa0076290:intron 30.0%
GAGGATCAATGAAATTTCAA+TGG - chr1_2:52273503-52273522 Msa0076290:intron 30.0%
AATCTCTCTCATTTCAACAT+TGG + chr1_2:52273559-52273578 None:intergenic 30.0%
AACAGAAAATGAGGAGTTTA+AGG - chr1_2:52273598-52273617 Msa0076290:intron 30.0%
!! ATGTTTGTTGTATGTTTCCT+TGG + chr1_2:52273823-52273842 None:intergenic 30.0%
ACAAGATTTGATGAAGAAAG+TGG - chr1_2:52273998-52274017 Msa0076290:intron 30.0%
! AACTATTGAGAAGAGTACAA+AGG - chr1_2:52274022-52274041 Msa0076290:intron 30.0%
! ACTATTGAGAAGAGTACAAA+GGG - chr1_2:52274023-52274042 Msa0076290:intron 30.0%
AAAAATAGGACAACTTCAGT+TGG - chr1_2:52274250-52274269 Msa0076290:intron 30.0%
AAGCAAAGAGAAAACCAAAA+TGG - chr1_2:52274322-52274341 Msa0076290:intron 30.0%
!! TTTCTTCTTCTTTTGGTTGT+TGG + chr1_2:52274402-52274421 None:intergenic 30.0%
!! AAGGTGTTTTCTTCTTCTTT+TGG + chr1_2:52274409-52274428 None:intergenic 30.0%
ACAAAAAAGCTAATGTCTCA+TGG + chr1_2:52274490-52274509 None:intergenic 30.0%
! GTCTTAAAGCATCTATAGAA+AGG + chr1_2:52274524-52274543 None:intergenic 30.0%
ATAATCCCTTCCTTAATTTC+TGG - chr1_2:52274661-52274680 Msa0076290:CDS 30.0%
CATCAATCTTGATGAAGGAA+AGG + chr1_2:52262647-52262666 None:intergenic 35.0%
TTCCTTCATCAAGATTGATG+TGG - chr1_2:52262647-52262666 Msa0076290:three_prime_UTR 35.0%
! TGGGGAAATTTTGCTTCTAA+TGG - chr1_2:52262683-52262702 Msa0076290:three_prime_UTR 35.0%
TCAACAATGTAAAGATCGTC+AGG + chr1_2:52262814-52262833 None:intergenic 35.0%
! ACATTGTTGATTGCAAGTTG+AGG - chr1_2:52262824-52262843 Msa0076290:CDS 35.0%
! CATTGTTGATTGCAAGTTGA+GGG - chr1_2:52262825-52262844 Msa0076290:CDS 35.0%
TTACTAACTTGAGGGTCAAA+GGG + chr1_2:52262861-52262880 None:intergenic 35.0%
! CAACAAAATGCCCCTTTTAT+AGG - chr1_2:52262930-52262949 Msa0076290:CDS 35.0%
TTAACCAATTTGAGTGGGTA+TGG - chr1_2:52263388-52263407 Msa0076290:CDS 35.0%
TAACCAATTTGAGTGGGTAT+GGG - chr1_2:52263389-52263408 Msa0076290:CDS 35.0%
GTATGGGTTTAACATGAGAT+GGG - chr1_2:52263405-52263424 Msa0076290:CDS 35.0%
AACAACACTATGACGATGAT+GGG - chr1_2:52263499-52263518 Msa0076290:CDS 35.0%
AGTCAAAATGAGAGAGAAAG+AGG - chr1_2:52263601-52263620 Msa0076290:CDS 35.0%
AAAATGAGAGAGAAAGAGGA+GGG - chr1_2:52263605-52263624 Msa0076290:CDS 35.0%
CGAGGAAAATCAAACATCAA+CGG + chr1_2:52263689-52263708 None:intergenic 35.0%
!! CGAATTTTAGTCCATTATGG+AGG - chr1_2:52263852-52263871 Msa0076290:CDS 35.0%
CACCAACAGTGACTAATAAT+AGG - chr1_2:52264247-52264266 Msa0076290:CDS 35.0%
GAAAATCGATGACACTTGTT+TGG + chr1_2:52264394-52264413 None:intergenic 35.0%
!! TTTTTAAGGGTCATGCTAAC+CGG + chr1_2:52264845-52264864 None:intergenic 35.0%
AACACCATCCCTAATAATCA+CGG - chr1_2:52264986-52265005 Msa0076290:CDS 35.0%
TGCTTGATCCGTGATTATTA+GGG + chr1_2:52264997-52265016 None:intergenic 35.0%
GAGTTTATGCGCTTTATAAG+GGG + chr1_2:52265565-52265584 None:intergenic 35.0%
AACTCGAGATAGTTGTCTTT+CGG - chr1_2:52265601-52265620 Msa0076290:CDS 35.0%
! TGGTGGATAGAGATAGTTTA+TGG - chr1_2:52265883-52265902 Msa0076290:CDS 35.0%
AGATAGTTTATGGTATAGGG+TGG - chr1_2:52265893-52265912 Msa0076290:CDS 35.0%
!!! CTATTTTTTGGACGGATGTT+TGG - chr1_2:52266060-52266079 Msa0076290:CDS 35.0%
CTGAAGAGTGAAACAGTATT+TGG - chr1_2:52266137-52266156 Msa0076290:CDS 35.0%
!! GGTATGTTTACTTTAGGTTG+GGG - chr1_2:52266158-52266177 Msa0076290:CDS 35.0%
!! GTATGTTTACTTTAGGTTGG+GGG - chr1_2:52266159-52266178 Msa0076290:CDS 35.0%
GCTTCAAAATGTTTCTTTGC+AGG - chr1_2:52266259-52266278 Msa0076290:CDS 35.0%
GAATGCTAATGCTTCTATTG+CGG - chr1_2:52266358-52266377 Msa0076290:CDS 35.0%
GCAAAAATCACTACCTTCAA+AGG + chr1_2:52266422-52266441 None:intergenic 35.0%
! TGAAGGTAGTGATTTTTGCT+TGG - chr1_2:52266423-52266442 Msa0076290:CDS 35.0%
!! ATCAGTTTTGTGTTGGATGT+GGG - chr1_2:52266513-52266532 Msa0076290:CDS 35.0%
!! GTATCAGGTTTGTATTGGTT+AGG + chr1_2:52266899-52266918 None:intergenic 35.0%
!!! GACTTGGACTCTTCTTTTTT+AGG + chr1_2:52266927-52266946 None:intergenic 35.0%
!!! GCTTTTGATTTTGGTTAGCT+GGG + chr1_2:52267182-52267201 None:intergenic 35.0%
AAATCCAAGTTCAACCAATC+AGG - chr1_2:52267820-52267839 Msa0076290:CDS 35.0%
AATCCTTGAAAGACATGAAG+AGG + chr1_2:52268032-52268051 None:intergenic 35.0%
TAAGTCCCAAGAACTCAAAA+TGG - chr1_2:52268155-52268174 Msa0076290:CDS 35.0%
ATATTTCATCAATGTCTGGC+TGG - chr1_2:52268517-52268536 Msa0076290:intron 35.0%
!! TTCACTTTGGAATGTTCTTC+TGG - chr1_2:52268575-52268594 Msa0076290:intron 35.0%
! TGGAATGTTCTTCTGGTTAT+AGG - chr1_2:52268582-52268601 Msa0076290:intron 35.0%
GTGTGGTGACATGATTTATT+TGG - chr1_2:52268768-52268787 Msa0076290:intron 35.0%
! AAATTTCAGCTGTTTCCTTC+AGG - chr1_2:52268798-52268817 Msa0076290:intron 35.0%
! AATTTCAGCTGTTTCCTTCA+GGG - chr1_2:52268799-52268818 Msa0076290:intron 35.0%
! TATTTCAGCTGTTTCCTTCA+GGG - chr1_2:52268847-52268866 Msa0076290:intron 35.0%
ATTGAGATAAGTTCAGAGGA+TGG + chr1_2:52268962-52268981 None:intergenic 35.0%
! CAACCATTTTCATAAGCTCT+GGG + chr1_2:52269095-52269114 None:intergenic 35.0%
! TCAACCATTTTCATAAGCTC+TGG + chr1_2:52269096-52269115 None:intergenic 35.0%
AGTTGCATGATCATATCTCT+CGG + chr1_2:52269148-52269167 None:intergenic 35.0%
AAATCGTCTGTAATCATCAC+AGG + chr1_2:52269225-52269244 None:intergenic 35.0%
GATTACAGACGATTTACCAA+TGG - chr1_2:52269230-52269249 Msa0076290:CDS 35.0%
TTTACCAATGGTTACTTCCA+TGG - chr1_2:52269242-52269261 Msa0076290:CDS 35.0%
! GTCTTGTTCAAAGCAGAATT+CGG + chr1_2:52269381-52269400 None:intergenic 35.0%
! AATTCTGCTTTGAACAAGAC+AGG - chr1_2:52269381-52269400 Msa0076290:intron 35.0%
GAGAACATGCAAAGTTTGAA+GGG - chr1_2:52269436-52269455 Msa0076290:intron 35.0%
GAGAATAGTGAGCTAAACAA+TGG - chr1_2:52269498-52269517 Msa0076290:CDS 35.0%
AATAGTGAGCTAAACAATGG+AGG - chr1_2:52269501-52269520 Msa0076290:intron 35.0%
AAAAGCCGAAGCAGAAATTT+CGG - chr1_2:52269569-52269588 Msa0076290:intron 35.0%
! TTCCTTTTCATCCTCCAATT+TGG + chr1_2:52269613-52269632 None:intergenic 35.0%
GAGAATTATCAAAGAGTCGA+TGG - chr1_2:52269705-52269724 Msa0076290:intron 35.0%
TAATCAAAATACAGGCGGAA+AGG - chr1_2:52269775-52269794 Msa0076290:intron 35.0%
AATCAAAATACAGGCGGAAA+GGG - chr1_2:52269776-52269795 Msa0076290:intron 35.0%
! TTATTTTCTCCAAGCATTCC+TGG + chr1_2:52269821-52269840 None:intergenic 35.0%
CTTGGAGAAAATAACAGATC+TGG - chr1_2:52269827-52269846 Msa0076290:intron 35.0%
TTTCAGATTCTACTCGAACA+AGG + chr1_2:52269944-52269963 None:intergenic 35.0%
TGTTCGAGTAGAATCTGAAA+AGG - chr1_2:52269944-52269963 Msa0076290:intron 35.0%
CTTGGAGACATTATCAAAAC+TGG - chr1_2:52269995-52270014 Msa0076290:intron 35.0%
AATCCTTCTAACTTTCTCCT+CGG + chr1_2:52270039-52270058 None:intergenic 35.0%
!! TGAAATCGAAGCTTTGAAGT+TGG - chr1_2:52270085-52270104 Msa0076290:intron 35.0%
TCTTCAATATCAGCAATGCT+TGG - chr1_2:52270145-52270164 Msa0076290:intron 35.0%
!!! TGAACAGAAGTGTCTTCTTT+TGG - chr1_2:52270268-52270287 Msa0076290:intron 35.0%
ACAGTCTGAATTACAGTCTT+TGG - chr1_2:52270310-52270329 Msa0076290:intron 35.0%
AGGAAGAATTGGGTAAACTT+TGG - chr1_2:52270375-52270394 Msa0076290:intron 35.0%
ACATTTGCATTCTCAATCTC+AGG - chr1_2:52270460-52270479 Msa0076290:intron 35.0%
CACTTTATTGTGAAAGTCAG+CGG + chr1_2:52270504-52270523 None:intergenic 35.0%
CACAATAAAGTGGAAATCCT+AGG - chr1_2:52270512-52270531 Msa0076290:intron 35.0%
TTTGTCCATACAAACTTTGC+AGG - chr1_2:52270628-52270647 Msa0076290:intron 35.0%
GACAATAGAGAAACTTGAAC+AGG - chr1_2:52270673-52270692 Msa0076290:intron 35.0%
AATAGAGAAACTTGAACAGG+AGG - chr1_2:52270676-52270695 Msa0076290:intron 35.0%
!! ACTGGCTCTTTTGGTAAAAT+TGG - chr1_2:52270910-52270929 Msa0076290:intron 35.0%
CAGAGGAAAAGTAAATGTGT+TGG - chr1_2:52271012-52271031 Msa0076290:intron 35.0%
GGAAAAGTAAATGTGTTGGA+AGG - chr1_2:52271016-52271035 Msa0076290:intron 35.0%
TTGTAATTGGGAAAACAAGG+TGG + chr1_2:52271092-52271111 None:intergenic 35.0%
! TTCAGTTGTGGCTTGTAATT+GGG + chr1_2:52271104-52271123 None:intergenic 35.0%
! TTTCAGTTGTGGCTTGTAAT+TGG + chr1_2:52271105-52271124 None:intergenic 35.0%
! CTCGGAAAATAACAACCTTT+TGG - chr1_2:52271138-52271157 Msa0076290:intron 35.0%
!! ATCTTTCAGAATTTGCTGAG+TGG + chr1_2:52271305-52271324 None:intergenic 35.0%
TGAAAAGCAACACAGTGAAT+TGG - chr1_2:52271327-52271346 Msa0076290:intron 35.0%
TAAAAAGGTAGAAGAGCTAC+TGG - chr1_2:52271393-52271412 Msa0076290:intron 35.0%
TGGTTTCTCTATATTCCCAA+AGG - chr1_2:52271413-52271432 Msa0076290:intron 35.0%
GGTTTCTCTATATTCCCAAA+GGG - chr1_2:52271414-52271433 Msa0076290:intron 35.0%
GAAGTTGAATGAAGATGAAG+TGG - chr1_2:52271456-52271475 Msa0076290:intron 35.0%
GTATCCAAGATTTGGAGAAA+AGG - chr1_2:52271599-52271618 Msa0076290:intron 35.0%
! AGTTCCTTTTCTCCAAATCT+TGG + chr1_2:52271606-52271625 None:intergenic 35.0%
TTGAAGACTCTTGACATTCA+CGG - chr1_2:52271781-52271800 Msa0076290:intron 35.0%
! GTTTTCCATGTATATGGTTC+AGG + chr1_2:52271849-52271868 None:intergenic 35.0%
! GTCTTTTGACACGATTTTCA+AGG - chr1_2:52271885-52271904 Msa0076290:intron 35.0%
AAAGAATCAGGAGTTGAAGT+TGG - chr1_2:52272074-52272093 Msa0076290:intron 35.0%
TTGAAGTTGGCAATAAGCAA+AGG - chr1_2:52272087-52272106 Msa0076290:intron 35.0%
TGAAGAGAAAAACTCCTTGT+TGG - chr1_2:52272218-52272237 Msa0076290:intron 35.0%
GAAGAGAAAAACTCCTTGTT+GGG - chr1_2:52272219-52272238 Msa0076290:intron 35.0%
CGGTTCAGAAAATAATAACC+TGG - chr1_2:52272404-52272423 Msa0076290:intron 35.0%
CTTGTCAGATTAGGAATGAA+AGG - chr1_2:52272553-52272572 Msa0076290:intron 35.0%
! GATTAGATATGATGATGCCA+AGG - chr1_2:52272680-52272699 Msa0076290:intron 35.0%
! TTAGATATGATGATGCCAAG+GGG - chr1_2:52272682-52272701 Msa0076290:intron 35.0%
! ATCCAAGCTCTTCATTTTGA+CGG + chr1_2:52272758-52272777 None:intergenic 35.0%
!! ATTTCTGGTTCACTTCACTT+AGG + chr1_2:52272782-52272801 None:intergenic 35.0%
AAGTGAAGTGAACCAGAAAT+TGG - chr1_2:52272782-52272801 Msa0076290:intron 35.0%
TCATTTCAGACTCCAATTTC+TGG + chr1_2:52272797-52272816 None:intergenic 35.0%
! TTTCTTCAAGTTCTTGGTGT+AGG + chr1_2:52272824-52272843 None:intergenic 35.0%
! GCTTAGTTTCTTCAAGTTCT+TGG + chr1_2:52272830-52272849 None:intergenic 35.0%
TCAATGAAACACTGCTTCAA+GGG - chr1_2:52272955-52272974 Msa0076290:intron 35.0%
CATAAACTACTCGAAAGACA+TGG - chr1_2:52273019-52273038 Msa0076290:intron 35.0%
! GAATTAGTTAGCAAGTTGGA+AGG - chr1_2:52273059-52273078 Msa0076290:intron 35.0%
GAATGATTGTGTTACATCTC+TGG - chr1_2:52273139-52273158 Msa0076290:intron 35.0%
TCATGACTATGAAAAACCAG+AGG - chr1_2:52273190-52273209 Msa0076290:intron 35.0%
TTGGTTACAAGTAGAAAAGG+AGG + chr1_2:52273313-52273332 None:intergenic 35.0%
GTTCTATAATCACCATTTCC+AGG - chr1_2:52273374-52273393 Msa0076290:intron 35.0%
!! TCTCATTTCAACATTGGCTT+TGG + chr1_2:52273553-52273572 None:intergenic 35.0%
AGGAGATTGAACAGAAAATG+AGG - chr1_2:52273589-52273608 Msa0076290:intron 35.0%
! TGATCAAGCATGATGTCTTT+TGG + chr1_2:52273657-52273676 None:intergenic 35.0%
TTCATCATATGGAGTAAGCA+GGG - chr1_2:52273689-52273708 Msa0076290:intron 35.0%
! ATGATCATATGCTTGAGTTG+TGG - chr1_2:52273730-52273749 Msa0076290:intron 35.0%
! TGATCATATGCTTGAGTTGT+GGG - chr1_2:52273731-52273750 Msa0076290:intron 35.0%
TGATAAGACACAGAAGATTG+CGG - chr1_2:52273761-52273780 Msa0076290:intron 35.0%
ACATACAACAAACATCCTTC+AGG - chr1_2:52273828-52273847 Msa0076290:intron 35.0%
AGATCTCAAGAAGAATGTCA+CGG - chr1_2:52273892-52273911 Msa0076290:intron 35.0%
TGAAGAAGACAACAAGAGTA+GGG - chr1_2:52273920-52273939 Msa0076290:intron 35.0%
CTCTTTAACGGTATCATACT+CGG + chr1_2:52274057-52274076 None:intergenic 35.0%
TCATCAGAATCAGATGAGAT+TGG - chr1_2:52274179-52274198 Msa0076290:intron 35.0%
CAGAGAGGATCAGAAAAAAT+AGG - chr1_2:52274236-52274255 Msa0076290:intron 35.0%
AGAAATCAATCACCCTTAGT+GGG + chr1_2:52274452-52274471 None:intergenic 35.0%
!! TTTCTGGTTTAATGCATGTG+TGG - chr1_2:52274677-52274696 Msa0076290:CDS 35.0%
ATGTGTGGATATACTTACAG+TGG - chr1_2:52274692-52274711 Msa0076290:CDS 35.0%
TGTGTGGATATACTTACAGT+GGG - chr1_2:52274693-52274712 Msa0076290:CDS 35.0%
CACCACATCAATCTTGATGA+AGG + chr1_2:52262652-52262671 None:intergenic 40.0%
! ATGTGGTGAACCATGCTTTT+GGG - chr1_2:52262664-52262683 Msa0076290:three_prime_UTR 40.0%
GCAAAATTTCCCCAAAAGCA+TGG + chr1_2:52262677-52262696 None:intergenic 40.0%
GGAAACTAAATTCCCACAGA+TGG - chr1_2:52262755-52262774 Msa0076290:three_prime_UTR 40.0%
AGAACAATGTTGCCATCTGT+GGG + chr1_2:52262770-52262789 None:intergenic 40.0%
AAGAACAATGTTGCCATCTG+TGG + chr1_2:52262771-52262790 None:intergenic 40.0%
ACAGATGGCAACATTGTTCT+TGG - chr1_2:52262770-52262789 Msa0076290:three_prime_UTR 40.0%
CTTACTAACTTGAGGGTCAA+AGG + chr1_2:52262862-52262881 None:intergenic 40.0%
!! GGGCATTTTGTTGTCCTATT+GGG + chr1_2:52262923-52262942 None:intergenic 40.0%
! AGAAAAGTGTGGTTGTTGAG+CGG + chr1_2:52263146-52263165 None:intergenic 40.0%
TTATCCCTTCTTCATTGGCA+CGG - chr1_2:52263174-52263193 Msa0076290:CDS 40.0%
ACAGTGACAGAAACATGTGA+AGG + chr1_2:52263203-52263222 None:intergenic 40.0%
AAACAAGACACTGGGTTTAC+TGG - chr1_2:52263251-52263270 Msa0076290:CDS 40.0%
TCTACAGCCTCACAACTTTA+TGG - chr1_2:52263338-52263357 Msa0076290:CDS 40.0%
AAACCCATACCCACTCAAAT+TGG + chr1_2:52263395-52263414 None:intergenic 40.0%
GGTATGGGTTTAACATGAGA+TGG - chr1_2:52263404-52263423 Msa0076290:CDS 40.0%
CAACAACACTATGACGATGA+TGG - chr1_2:52263498-52263517 Msa0076290:CDS 40.0%
TGGGTTGTTAACAATGACAG+TGG - chr1_2:52263518-52263537 Msa0076290:CDS 40.0%
!!! GAATCTTTTCAGGTTCTGCA+AGG - chr1_2:52263574-52263593 Msa0076290:CDS 40.0%
CAAAATGAGAGAGAAAGAGG+AGG - chr1_2:52263604-52263623 Msa0076290:CDS 40.0%
GGTGCATATCCTCTCTATTT+GGG + chr1_2:52263754-52263773 None:intergenic 40.0%
AGGTGCATATCCTCTCTATT+TGG + chr1_2:52263755-52263774 None:intergenic 40.0%
GCAAAGCCTCATGAAATCAA+GGG - chr1_2:52263781-52263800 Msa0076290:CDS 40.0%
TTTAGTCCATTATGGAGGGT+AGG - chr1_2:52263857-52263876 Msa0076290:CDS 40.0%
GGAGAGAAAAAGGAAGAGAA+AGG - chr1_2:52264084-52264103 Msa0076290:CDS 40.0%
!!! GCCGGTGATCTATTTTTATG+TGG + chr1_2:52264186-52264205 None:intergenic 40.0%
GTGACTAAAGTCAAATGCTG+TGG + chr1_2:52264208-52264227 None:intergenic 40.0%
! TGTTGGTGTCCTGACTAAAT+TGG + chr1_2:52264235-52264254 None:intergenic 40.0%
!! TAGGAATTGGTCTTTGCTAG+GGG + chr1_2:52264351-52264370 None:intergenic 40.0%
!! GTAGGAATTGGTCTTTGCTA+GGG + chr1_2:52264352-52264371 None:intergenic 40.0%
AGTTAAATGCTCGGAATCAC+CGG + chr1_2:52264580-52264599 None:intergenic 40.0%
! ATTAGGGATGGTGTTGGATA+CGG + chr1_2:52264981-52265000 None:intergenic 40.0%
GTGATTATTAGGGATGGTGT+TGG + chr1_2:52264987-52265006 None:intergenic 40.0%
TGATCCGTGATTATTAGGGA+TGG + chr1_2:52264993-52265012 None:intergenic 40.0%
GTGCTTGATCCGTGATTATT+AGG + chr1_2:52264998-52265017 None:intergenic 40.0%
AATAATCACGGATCAAGCAC+CGG - chr1_2:52264998-52265017 Msa0076290:CDS 40.0%
ATAGCCGCAATTACCAAATC+TGG + chr1_2:52265024-52265043 None:intergenic 40.0%
CTTTATAAGGGGATCCCAAA+AGG + chr1_2:52265554-52265573 None:intergenic 40.0%
TAAACTCTAGACTGTCAGGT+TGG - chr1_2:52265578-52265597 Msa0076290:CDS 40.0%
!!! TCTTTTTTCAAGGCTCCATC+AGG - chr1_2:52265679-52265698 Msa0076290:CDS 40.0%
ATAGAGGATACGATACCTGA+TGG + chr1_2:52265697-52265716 None:intergenic 40.0%
TTTATGGTATAGGGTGGTGT+CGG - chr1_2:52265899-52265918 Msa0076290:CDS 40.0%
! ATGTTTCTTTGCAGGTTGAC+AGG - chr1_2:52266267-52266286 Msa0076290:CDS 40.0%
! TGTTTCTTTGCAGGTTGACA+GGG - chr1_2:52266268-52266287 Msa0076290:CDS 40.0%
TAATGCTTCTATTGCGGATG+CGG - chr1_2:52266364-52266383 Msa0076290:CDS 40.0%
!! GATCAGTTTTGTGTTGGATG+TGG - chr1_2:52266512-52266531 Msa0076290:CDS 40.0%
!! TCAGTTTTGTGTTGGATGTG+GGG - chr1_2:52266514-52266533 Msa0076290:CDS 40.0%
! AATGGCTTCAAAATAGTGGG+TGG + chr1_2:52267131-52267150 None:intergenic 40.0%
GCGAATGGCTTCAAAATAGT+GGG + chr1_2:52267134-52267153 None:intergenic 40.0%
AGCGAATGGCTTCAAAATAG+TGG + chr1_2:52267135-52267154 None:intergenic 40.0%
!!! ACTATTTTGAAGCCATTCGC+TGG - chr1_2:52267134-52267153 Msa0076290:CDS 40.0%
!!! TTGATTTTGGTTAGCTGGGT+TGG + chr1_2:52267178-52267197 None:intergenic 40.0%
!!! GGCTTTTGATTTTGGTTAGC+TGG + chr1_2:52267183-52267202 None:intergenic 40.0%
!! CTGTGTTTTTGCACAACTCA+CGG - chr1_2:52267276-52267295 Msa0076290:CDS 40.0%
TCACGGAGATCTAACTAACA+TGG - chr1_2:52267293-52267312 Msa0076290:CDS 40.0%
CACGGAGATCTAACTAACAT+GGG - chr1_2:52267294-52267313 Msa0076290:CDS 40.0%
! CATACCTGATTGGTTGAACT+TGG + chr1_2:52267827-52267846 None:intergenic 40.0%
CTGCTTCTGTGTGTATTCAT+TGG + chr1_2:52267958-52267977 None:intergenic 40.0%
TTGCCTCTTCATGTCTTTCA+AGG - chr1_2:52268026-52268045 Msa0076290:CDS 40.0%
AATAGAACAGAAAGCGGTGA+TGG - chr1_2:52268069-52268088 Msa0076290:CDS 40.0%
CTAGGAGAATGTATTCTTGG+TGG - chr1_2:52268119-52268138 Msa0076290:CDS 40.0%
! GAGAATGTATTCTTGGTGGT+GGG - chr1_2:52268123-52268142 Msa0076290:CDS 40.0%
TTGAGTTCTTGGGACTTATG+TGG + chr1_2:52268153-52268172 None:intergenic 40.0%
!!! TGGAGCCATTTTGAGTTCTT+GGG + chr1_2:52268163-52268182 None:intergenic 40.0%
!!! TTGGAGCCATTTTGAGTTCT+TGG + chr1_2:52268164-52268183 None:intergenic 40.0%
TGGCTCCAAGAAAATCTTAC+AGG - chr1_2:52268175-52268194 Msa0076290:CDS 40.0%
ACTACCAAAGCCAGAAAGAT+AGG + chr1_2:52268209-52268228 None:intergenic 40.0%
TTCGTGACTTGACACATTCT+TGG - chr1_2:52268260-52268279 Msa0076290:intron 40.0%
! CTTGACACATTCTTGGTTTG+AGG - chr1_2:52268267-52268286 Msa0076290:intron 40.0%
ACTATAGATGTTGAAGCGTG+TGG - chr1_2:52268751-52268770 Msa0076290:intron 40.0%
! GTATTTCAGCTGTTTCCTTC+AGG - chr1_2:52268846-52268865 Msa0076290:intron 40.0%
TATCTCGTGATGCACAGATA+TGG - chr1_2:52268984-52269003 Msa0076290:intron 40.0%
GAGAGATATGATCATGCAAC+TGG - chr1_2:52269147-52269166 Msa0076290:CDS 40.0%
ATTAGGAAATGCTTCAGCCA+TGG + chr1_2:52269196-52269215 None:intergenic 40.0%
AGTCCAGAAATGTACGTGAA+GGG + chr1_2:52269299-52269318 None:intergenic 40.0%
CAAACTTTGCATGTTCTCGA+GGG + chr1_2:52269434-52269453 None:intergenic 40.0%
TCAAACTTTGCATGTTCTCG+AGG + chr1_2:52269435-52269454 None:intergenic 40.0%
CGAGAACATGCAAAGTTTGA+AGG - chr1_2:52269435-52269454 Msa0076290:intron 40.0%
!!! GCTCAATTTTTTAGAGACGC+AGG - chr1_2:52269473-52269492 Msa0076290:CDS 40.0%
!!! CAATTTTTTAGAGACGCAGG+AGG - chr1_2:52269476-52269495 Msa0076290:CDS 40.0%
TAAGGCCGAAATTTCTGCTT+CGG + chr1_2:52269577-52269596 None:intergenic 40.0%
TTTGGCAAGGGCTTTCTTTA+AGG + chr1_2:52269595-52269614 None:intergenic 40.0%
AAAGAAAGCCCTTGCCAAAT+TGG - chr1_2:52269596-52269615 Msa0076290:intron 40.0%
TTCATCCTCCAATTTGGCAA+GGG + chr1_2:52269607-52269626 None:intergenic 40.0%
TTTCATCCTCCAATTTGGCA+AGG + chr1_2:52269608-52269627 None:intergenic 40.0%
TGCCAAATTGGAGGATGAAA+AGG - chr1_2:52269608-52269627 Msa0076290:intron 40.0%
AGCTGAAGTTCAAGACTTGA+AGG - chr1_2:52269746-52269765 Msa0076290:intron 40.0%
AGTTCAAGACTTGAAGGAAG+CGG - chr1_2:52269752-52269771 Msa0076290:intron 40.0%
GGAAGCGGTAATCAAAATAC+AGG - chr1_2:52269767-52269786 Msa0076290:intron 40.0%
AGCGGTAATCAAAATACAGG+CGG - chr1_2:52269770-52269789 Msa0076290:intron 40.0%
!! TGAAGTTGAGTCTTTGAAGC+AGG - chr1_2:52269917-52269936 Msa0076290:intron 40.0%
GGAGACATTATCAAAACTGG+AGG - chr1_2:52269998-52270017 Msa0076290:intron 40.0%
GGAGAGATTAAAAGAATCCG+AGG - chr1_2:52270019-52270038 Msa0076290:intron 40.0%
AATCCGAGGAGAAAGTTAGA+AGG - chr1_2:52270033-52270052 Msa0076290:intron 40.0%
AGAGAGTTTATGTTCCAGAC+TGG + chr1_2:52270180-52270199 None:intergenic 40.0%
TAAACTCTCTTGTGCTGAAG+AGG - chr1_2:52270190-52270209 Msa0076290:intron 40.0%
TGAAGAACTTAACGAGAAGC+AGG - chr1_2:52270355-52270374 Msa0076290:intron 40.0%
TAACGAGAAGCAGGAAGAAT+TGG - chr1_2:52270364-52270383 Msa0076290:intron 40.0%
AACGAGAAGCAGGAAGAATT+GGG - chr1_2:52270365-52270384 Msa0076290:intron 40.0%
!! ACTTTGGAGTTCCTTACAAG+AGG - chr1_2:52270391-52270410 Msa0076290:intron 40.0%
!! CGCTGACTTTCACAATAAAG+TGG - chr1_2:52270502-52270521 Msa0076290:intron 40.0%
TATGTGATTCGACATTCCCT+AGG + chr1_2:52270532-52270551 None:intergenic 40.0%
CTCATCCTGCAAAGTTTGTA+TGG + chr1_2:52270636-52270655 None:intergenic 40.0%
GATTTAGATCCACAGTGCTT+TGG - chr1_2:52270815-52270834 Msa0076290:intron 40.0%
GGCTGAAAAAGATGAGAAAC+TGG - chr1_2:52270892-52270911 Msa0076290:intron 40.0%
!! AGATGAGAAACTGGCTCTTT+TGG - chr1_2:52270901-52270920 Msa0076290:intron 40.0%
CTCAGCATTCAAGTCTGAAA+TGG + chr1_2:52270981-52271000 None:intergenic 40.0%
TTCAGACTTGAATGCTGAGT+TGG - chr1_2:52270982-52271001 Msa0076290:intron 40.0%
GGCTTGTAATTGGGAAAACA+AGG + chr1_2:52271095-52271114 None:intergenic 40.0%
! CTTCTCAAGCTTTTCAGTTG+TGG + chr1_2:52271116-52271135 None:intergenic 40.0%
TGAAAAGCTTGAGAAGCTCT+CGG - chr1_2:52271120-52271139 Msa0076290:intron 40.0%
ACCGAACTTGATGTACTAAG+AGG - chr1_2:52271184-52271203 Msa0076290:intron 40.0%
CCCTCTTAGTACATCAAGTT+CGG + chr1_2:52271188-52271207 None:intergenic 40.0%
CCGAACTTGATGTACTAAGA+GGG - chr1_2:52271185-52271204 Msa0076290:intron 40.0%
! ACTTTTCATGGTCAAGTGAC+TGG + chr1_2:52271237-52271256 None:intergenic 40.0%
!! GGTGTTCAACTCTGAAACTA+AGG + chr1_2:52271284-52271303 None:intergenic 40.0%
AAGGGAGTCGTCACTTAAAA+AGG - chr1_2:52271378-52271397 Msa0076290:intron 40.0%
TGAAAGAAGATGCAAAGTGC+CGG - chr1_2:52271506-52271525 Msa0076290:intron 40.0%
! GCAGAAGTGTATCCAAGATT+TGG - chr1_2:52271591-52271610 Msa0076290:intron 40.0%
GTATATGGTTCAGGAGAGTT+CGG + chr1_2:52271840-52271859 None:intergenic 40.0%
ACTCTCCTGAACCATATACA+TGG - chr1_2:52271841-52271860 Msa0076290:intron 40.0%
AGAAAAACGAGAACTTGACG+AGG - chr1_2:52271990-52272009 Msa0076290:intron 40.0%
GATACAGTCTAAGCAGTTCA+CGG - chr1_2:52272020-52272039 Msa0076290:intron 40.0%
AAGCAAAGGAGAAGAGAGAA+TGG - chr1_2:52272101-52272120 Msa0076290:intron 40.0%
AAAGAGCCACAACAACTTAC+AGG - chr1_2:52272176-52272195 Msa0076290:intron 40.0%
AGATTGAACGAATGTCTCGT+GGG + chr1_2:52272304-52272323 None:intergenic 40.0%
TAGATTGAACGAATGTCTCG+TGG + chr1_2:52272305-52272324 None:intergenic 40.0%
GGTCAAGAACTTGATAAGCT+CGG - chr1_2:52272384-52272403 Msa0076290:intron 40.0%
TTATCTTCAATCTGTCCTCC+AGG + chr1_2:52272425-52272444 None:intergenic 40.0%
GGAGGACAGATTGAAGATAA+TGG - chr1_2:52272425-52272444 Msa0076290:intron 40.0%
AAGGGACATGTTGTGTCAAA+AGG - chr1_2:52272572-52272591 Msa0076290:intron 40.0%
GTGTAAAGCATGAAACGTCT+TGG + chr1_2:52272619-52272638 None:intergenic 40.0%
AACAGAATTGCAAAGAACGG+CGG - chr1_2:52272647-52272666 Msa0076290:intron 40.0%
TTTCCAATTGTCCTCAGACA+AGG - chr1_2:52272731-52272750 Msa0076290:intron 40.0%
GTCAATGAAACACTGCTTCA+AGG - chr1_2:52272954-52272973 Msa0076290:intron 40.0%
ACATGTATCAGCTAGCTCAA+AGG + chr1_2:52272985-52273004 None:intergenic 40.0%
! AGCAAGTTGGAAGGTGAAAA+TGG - chr1_2:52273068-52273087 Msa0076290:intron 40.0%
! GCAAGTTGGAAGGTGAAAAT+GGG - chr1_2:52273069-52273088 Msa0076290:intron 40.0%
!! CATTCAAAGCACTGATAGCT+GGG + chr1_2:52273124-52273143 None:intergenic 40.0%
!! TCATTCAAAGCACTGATAGC+TGG + chr1_2:52273125-52273144 None:intergenic 40.0%
GAGAGAGATTCAAGAAGCAA+AGG - chr1_2:52273569-52273588 Msa0076290:intron 40.0%
ATCTCAGTTGCAGGATTATC+TGG + chr1_2:52273624-52273643 None:intergenic 40.0%
GTTCATCATATGGAGTAAGC+AGG - chr1_2:52273688-52273707 Msa0076290:intron 40.0%
TCATCATATGGAGTAAGCAG+GGG - chr1_2:52273690-52273709 Msa0076290:intron 40.0%
GTGAAGAAGACAACAAGAGT+AGG - chr1_2:52273919-52273938 Msa0076290:intron 40.0%
! AGACAACAAGAGTAGGGTTT+TGG - chr1_2:52273926-52273945 Msa0076290:intron 40.0%
CGCTTCAAACTGCTCTTTAA+CGG + chr1_2:52274069-52274088 None:intergenic 40.0%
CTGGTGAAGAATGTAGAAGA+GGG - chr1_2:52274131-52274150 Msa0076290:intron 40.0%
AATAGGACAACTTCAGTTGG+AGG - chr1_2:52274253-52274272 Msa0076290:intron 40.0%
! CACCTTTTTGTGCATGTGTA+AGG - chr1_2:52274423-52274442 Msa0076290:intron 40.0%
CAGAAATCAATCACCCTTAG+TGG + chr1_2:52274453-52274472 None:intergenic 40.0%
GTCTCATGGAATCGAAACTA+TGG + chr1_2:52274476-52274495 None:intergenic 40.0%
CCTCTTCTTGCAAATACATG+AGG + chr1_2:52274586-52274605 None:intergenic 40.0%
CCTCATGTATTTGCAAGAAG+AGG - chr1_2:52274583-52274602 Msa0076290:CDS 40.0%
TGTATTTGCAAGAAGAGGCT+AGG - chr1_2:52274588-52274607 Msa0076290:CDS 40.0%
!! GAAAAGAGCACCACCTTTGT+CGG + chr1_2:52262589-52262608 None:intergenic 45.0%
! GATGTGGTGAACCATGCTTT+TGG - chr1_2:52262663-52262682 Msa0076290:three_prime_UTR 45.0%
! TGTGGTGAACCATGCTTTTG+GGG - chr1_2:52262665-52262684 Msa0076290:three_prime_UTR 45.0%
!! GGGGCATTTTGTTGTCCTAT+TGG + chr1_2:52262924-52262943 None:intergenic 45.0%
TGCGCTCTCACCTATAAAAG+GGG + chr1_2:52262943-52262962 None:intergenic 45.0%
CTGCGCTCTCACCTATAAAA+GGG + chr1_2:52262944-52262963 None:intergenic 45.0%
!! CTTTTATAGGTGAGAGCGCA+GGG - chr1_2:52262943-52262962 Msa0076290:CDS 45.0%
GTTGTTGAGCGGACAAAGAA+GGG + chr1_2:52263135-52263154 None:intergenic 45.0%
CGCAAAGCCTCATGAAATCA+AGG - chr1_2:52263780-52263799 Msa0076290:CDS 45.0%
TCCTCTCCCTTGATTTCATG+AGG + chr1_2:52263790-52263809 None:intergenic 45.0%
CTAAAGTCAAATGCTGTGGC+CGG + chr1_2:52264204-52264223 None:intergenic 45.0%
GTCACGACACCAATTTAGTC+AGG - chr1_2:52264223-52264242 Msa0076290:CDS 45.0%
!! GGTAGGAATTGGTCTTTGCT+AGG + chr1_2:52264353-52264372 None:intergenic 45.0%
TAACCAATGCTCGGAATCAC+CGG + chr1_2:52264690-52264709 None:intergenic 45.0%
CGCATAAACTCTAGACTGTC+AGG - chr1_2:52265574-52265593 Msa0076290:CDS 45.0%
TCGAGATAGTTGTCTTTCGG+TGG - chr1_2:52265604-52265623 Msa0076290:CDS 45.0%
CGAGATAGTTGTCTTTCGGT+GGG - chr1_2:52265605-52265624 Msa0076290:CDS 45.0%
! AAGAGCATAAACAGGCAACG+AGG + chr1_2:52265659-52265678 None:intergenic 45.0%
GCAAACTATTTGTCGGAGTC+AGG - chr1_2:52265785-52265804 Msa0076290:CDS 45.0%
AACTATTTGTCGGAGTCAGG+AGG - chr1_2:52265788-52265807 Msa0076290:CDS 45.0%
CATTATTAGGGAAGTGGTGC+TGG - chr1_2:52265853-52265872 Msa0076290:CDS 45.0%
! TAGTGGTAATGTTAGTCGCG+TGG - chr1_2:52266019-52266038 Msa0076290:CDS 45.0%
! TTTTGGACGGATGTTTGGGT+AGG - chr1_2:52266065-52266084 Msa0076290:CDS 45.0%
!! TACTTTAGGTTGGGGGTTAG+AGG - chr1_2:52266166-52266185 Msa0076290:CDS 45.0%
!! ACTTTAGGTTGGGGGTTAGA+GGG - chr1_2:52266167-52266186 Msa0076290:CDS 45.0%
TGTGCCTTCTTTGTGGCATA+GGG - chr1_2:52266391-52266410 Msa0076290:CDS 45.0%
ACATCCCTATGCCACAAAGA+AGG + chr1_2:52266398-52266417 None:intergenic 45.0%
GCATAGGGATGTTCCTTTGA+AGG - chr1_2:52266406-52266425 Msa0076290:CDS 45.0%
! AGTGATTTTTGCTTGGCGCT+TGG - chr1_2:52266430-52266449 Msa0076290:CDS 45.0%
CGAAGAAGATTGTCCTTGGT+GGG + chr1_2:52266470-52266489 None:intergenic 45.0%
TCGAAGAAGATTGTCCTTGG+TGG + chr1_2:52266471-52266490 None:intergenic 45.0%
GATCATCAAACCCAATCACG+TGG + chr1_2:52266496-52266515 None:intergenic 45.0%
!! CAAAATAGTGGGTGGAGGAT+TGG + chr1_2:52267123-52267142 None:intergenic 45.0%
!!! ATTTTGGTTAGCTGGGTTGG+TGG + chr1_2:52267175-52267194 None:intergenic 45.0%
AAGCAGAAACTGCGATGACT+TGG - chr1_2:52267972-52267991 Msa0076290:CDS 45.0%
GGAGAATGTATTCTTGGTGG+TGG - chr1_2:52268122-52268141 Msa0076290:CDS 45.0%
GGTAATGCCTCCTATCTTTC+TGG - chr1_2:52268196-52268215 Msa0076290:CDS 45.0%
ACCAAAGCCAGAAAGATAGG+AGG + chr1_2:52268206-52268225 None:intergenic 45.0%
TGCATGTAGAATGTCCCTGA+AGG + chr1_2:52268816-52268835 None:intergenic 45.0%
TGCATGTAGAATGTCCCTGA+AGG + chr1_2:52268816-52268835 None:intergenic 45.0%
ATGCACAGATATGGACGTCA+AGG - chr1_2:52268993-52269012 Msa0076290:intron 45.0%
AAGATGCAGATTCCTTTGCC+AGG - chr1_2:52269043-52269062 Msa0076290:intron 45.0%
ATAGTACATTTCCGCTCTCC+TGG + chr1_2:52269064-52269083 None:intergenic 45.0%
TTATAGGGCATACCGTGCAT+TGG - chr1_2:52269122-52269141 Msa0076290:CDS 45.0%
GTCTCCATGGAAGTAACCAT+TGG + chr1_2:52269249-52269268 None:intergenic 45.0%
GAGTCCAGAAATGTACGTGA+AGG + chr1_2:52269300-52269319 None:intergenic 45.0%
TTGGAGGATGAAAAGGAAGC+TGG - chr1_2:52269615-52269634 Msa0076290:intron 45.0%
AGCTACTCTTCTTCAGTACC+AGG - chr1_2:52269800-52269819 Msa0076290:intron 45.0%
TCTTCAGTACCAGGAATGCT+TGG - chr1_2:52269809-52269828 Msa0076290:intron 45.0%
! TCTTTTGCTCAGAAGGATGC+AGG - chr1_2:52269861-52269880 Msa0076290:intron 45.0%
CTTGGAGATACTTTCCAGTC+TGG - chr1_2:52270163-52270182 Msa0076290:intron 45.0%
ACAGTCTTTGGCACACAAGA+TGG - chr1_2:52270322-52270341 Msa0076290:intron 45.0%
CAGTCTTTGGCACACAAGAT+GGG - chr1_2:52270323-52270342 Msa0076290:intron 45.0%
TCGCAATCTCTCCTCTTGTA+AGG + chr1_2:52270405-52270424 None:intergenic 45.0%
GGAGAGATTGCGATTCATTG+AGG - chr1_2:52270412-52270431 Msa0076290:intron 45.0%
ACATGAAGCTATGATCGACG+AGG - chr1_2:52270781-52270800 Msa0076290:intron 45.0%
AGACGAGAACTCAAAGCTGA+AGG - chr1_2:52270859-52270878 Msa0076290:intron 45.0%
AAAGCTGAAGGAGACATGTG+AGG - chr1_2:52270871-52270890 Msa0076290:intron 45.0%
! GGAAACCATGGAGAAGCTTT+TGG - chr1_2:52270931-52270950 Msa0076290:intron 45.0%
CTTCTCCAAAAGCTTCTCCA+TGG + chr1_2:52270939-52270958 None:intergenic 45.0%
ATTTCTCCACAAGCAGAGAC+TGG + chr1_2:52271048-52271067 None:intergenic 45.0%
ATCAACTCTTGCTGCTGAGA+AGG - chr1_2:52271066-52271085 Msa0076290:intron 45.0%
TCTGCAATGCTCTTCCCTTT+GGG + chr1_2:52271431-52271450 None:intergenic 45.0%
TGAAGATGAAGTGGCCAACA+AGG - chr1_2:52271465-52271484 Msa0076290:intron 45.0%
! GAAAGAAGATGCAAAGTGCC+GGG - chr1_2:52271507-52271526 Msa0076290:intron 45.0%
ACAAGAATACGAGGAGGAAC+TGG - chr1_2:52271531-52271550 Msa0076290:intron 45.0%
AAAGTCTCTGGCACTCAACT+AGG + chr1_2:52271636-52271655 None:intergenic 45.0%
! AGTTGAGTGCCAGAGACTTT+TGG - chr1_2:52271636-52271655 Msa0076290:intron 45.0%
TTTCAAGGAAAGCCACCACT+TGG - chr1_2:52271900-52271919 Msa0076290:intron 45.0%
AATTCTCAATGGCCAAGTGG+TGG + chr1_2:52271915-52271934 None:intergenic 45.0%
CTGAATTCTCAATGGCCAAG+TGG + chr1_2:52271918-52271937 None:intergenic 45.0%
GAACTGCTTAGACTGTATCC+TGG + chr1_2:52272019-52272038 None:intergenic 45.0%
TGAAGATCTGAGTGAGGAGA+AGG - chr1_2:52272248-52272267 Msa0076290:intron 45.0%
GAAGATCTGAGTGAGGAGAA+GGG - chr1_2:52272249-52272268 Msa0076290:intron 45.0%
CTCCAGGAACTTAAACAGCT+TGG - chr1_2:52272363-52272382 Msa0076290:intron 45.0%
! GACCAAGCTGTTTAAGTTCC+TGG + chr1_2:52272368-52272387 None:intergenic 45.0%
! TTGCTCTTCAAGTTTCCCCT+TGG + chr1_2:52272700-52272719 None:intergenic 45.0%
!! ATTTTGACGGTCCTTGTCTG+AGG + chr1_2:52272745-52272764 None:intergenic 45.0%
GACCGTCAAAATGAAGAGCT+TGG - chr1_2:52272753-52272772 Msa0076290:intron 45.0%
GATTGAACAATGGGAAACCC+AGG - chr1_2:52272896-52272915 Msa0076290:intron 45.0%
AGAACTCTTTGCTGAACTGC+AGG - chr1_2:52272923-52272942 Msa0076290:intron 45.0%
TGAAACACTGCTTCAAGGGA+AGG - chr1_2:52272959-52272978 Msa0076290:intron 45.0%
TTTCATTGATCCTCCTCTGC+AGG + chr1_2:52273497-52273516 None:intergenic 45.0%
AGCACTTCAATCTCAGTTGC+AGG + chr1_2:52273633-52273652 None:intergenic 45.0%
!! TCGTCAAAGAAGAGCATCCA+AGG - chr1_2:52273803-52273822 Msa0076290:intron 45.0%
ACATCCTTCAGGAGATTCCT+TGG - chr1_2:52273839-52273858 Msa0076290:intron 45.0%
AGGAGATTCCTTGGTGGAAA+AGG - chr1_2:52273848-52273867 Msa0076290:intron 45.0%
TTCCTTGGTGGAAAAGGAGT+TGG - chr1_2:52273854-52273873 Msa0076290:intron 45.0%
TCCTTGGTGGAAAAGGAGTT+GGG - chr1_2:52273855-52273874 Msa0076290:intron 45.0%
! CTCTTGTTGTCTTCTTCACG+TGG + chr1_2:52273918-52273937 None:intergenic 45.0%
CTACATTCTTCACCAGCTTG+CGG + chr1_2:52274127-52274146 None:intergenic 45.0%
GCTGGTGAAGAATGTAGAAG+AGG - chr1_2:52274130-52274149 Msa0076290:intron 45.0%
!! ATGAGATTGGAAGTGTCAGC+AGG - chr1_2:52274192-52274211 Msa0076290:intron 45.0%
CCAAAATGGCCGATCAAAGT+CGG - chr1_2:52274336-52274355 Msa0076290:intron 45.0%
ACGTACTCTCCGACTTTGAT+CGG + chr1_2:52274348-52274367 None:intergenic 45.0%
! AAAGTCGGAGAGTACGTTTG+CGG - chr1_2:52274351-52274370 Msa0076290:intron 45.0%
CGTTTGCGGGATTATCTCTA+TGG - chr1_2:52274365-52274384 Msa0076290:intron 45.0%
GGCCTTACACATGCACAAAA+AGG + chr1_2:52274428-52274447 None:intergenic 45.0%
AATCAATCACCCTTAGTGGG+TGG + chr1_2:52274449-52274468 None:intergenic 45.0%
GAGGCACAAACATGTACAGA+AGG + chr1_2:52274567-52274586 None:intergenic 45.0%
TTTGCAAGAAGAGGCTAGGA+TGG - chr1_2:52274592-52274611 Msa0076290:CDS 45.0%
!!! ATAAATTTTACATTAAAAAT+AGG - chr1_2:52264544-52264563 Msa0076290:CDS 5.0%
!!! TAAATTTTACATTAAAAATA+GGG - chr1_2:52264545-52264564 Msa0076290:CDS 5.0%
!!! ATAAATTTTACATTAAAAAT+AGG - chr1_2:52264544-52264563 Msa0076290:CDS 5.0%
!!! TAAATTTTACATTAAAAATA+GGG - chr1_2:52264545-52264564 Msa0076290:CDS 5.0%
!!! GTTAAATATTATATTTTTAA+GGG + chr1_2:52264858-52264877 None:intergenic 5.0%
!!! AGTTAAATATTATATTTTTA+AGG + chr1_2:52264859-52264878 None:intergenic 5.0%
!! ATATATAATGAAATTAAAAT+TGG - chr1_2:52265242-52265261 Msa0076290:CDS 5.0%
!!! TCTATTTTTAATAAATTTTT+TGG - chr1_2:52265721-52265740 Msa0076290:CDS 5.0%
!!! CTATTTTTAATAAATTTTTT+GGG - chr1_2:52265722-52265741 Msa0076290:CDS 5.0%
!!! TATTTTTAATAAATTTTTTG+GGG - chr1_2:52265723-52265742 Msa0076290:CDS 5.0%
!!! AAAAAATAATCAAAATTTTA+TGG + chr1_2:52267369-52267388 None:intergenic 5.0%
AGTGAGACTTCCGACAAAGG+TGG - chr1_2:52262576-52262595 Msa0076290:three_prime_UTR 50.0%
! GGTGGTGCTCTTTTCTGCTT+AGG - chr1_2:52262594-52262613 Msa0076290:three_prime_UTR 50.0%
CCTGCGCTCTCACCTATAAA+AGG + chr1_2:52262945-52262964 None:intergenic 50.0%
!! CCTTTTATAGGTGAGAGCGC+AGG - chr1_2:52262942-52262961 Msa0076290:CDS 50.0%
GGTGCAGATCCTCTCCATTT+GGG - chr1_2:52262964-52262983 Msa0076290:CDS 50.0%
GGTTGTTGAGCGGACAAAGA+AGG + chr1_2:52263136-52263155 None:intergenic 50.0%
GTCACCGTGCCAATGAAGAA+GGG + chr1_2:52263181-52263200 None:intergenic 50.0%
AAGATCCCGACCCTCTACTA+CGG - chr1_2:52263448-52263467 Msa0076290:CDS 50.0%
GCCTCATGAAATCAAGGGAG+AGG - chr1_2:52263786-52263805 Msa0076290:CDS 50.0%
CATCCGTAACCGCTTTCCAA+CGG + chr1_2:52263814-52263833 None:intergenic 50.0%
AGTCCATTATGGAGGGTAGG+AGG - chr1_2:52263860-52263879 Msa0076290:CDS 50.0%
TTGCCTCCTACCCTCCATAA+TGG + chr1_2:52263866-52263885 None:intergenic 50.0%
TAACCGGTGATTCCGAGCAT+TGG - chr1_2:52264574-52264593 Msa0076290:CDS 50.0%
CCGCAATTACCAAATCTGGC+CGG + chr1_2:52265020-52265039 None:intergenic 50.0%
! CCGGCCAGATTTGGTAATTG+CGG - chr1_2:52265017-52265036 Msa0076290:CDS 50.0%
CATAAACAGGCAACGAGGAC+AGG + chr1_2:52265654-52265673 None:intergenic 50.0%
ATTTGTCGGAGTCAGGAGGT+TGG - chr1_2:52265792-52265811 Msa0076290:CDS 50.0%
!! AGTCAGGAGGTTGGTGGTTT+GGG - chr1_2:52265801-52265820 Msa0076290:CDS 50.0%
! TATTAGGGAAGTGGTGCTGG+AGG - chr1_2:52265856-52265875 Msa0076290:CDS 50.0%
! TGGTAATGTTAGTCGCGTGG+TGG - chr1_2:52266022-52266041 Msa0076290:CDS 50.0%
GGTAATGTTAGTCGCGTGGT+GGG - chr1_2:52266023-52266042 Msa0076290:CDS 50.0%
!! CTTTAGGTTGGGGGTTAGAG+GGG - chr1_2:52266168-52266187 Msa0076290:CDS 50.0%
!! TTTAGGTTGGGGGTTAGAGG+GGG - chr1_2:52266169-52266188 Msa0076290:CDS 50.0%
AAGAGTTAGTGGGGGAGCTT+AGG - chr1_2:52266231-52266250 Msa0076290:CDS 50.0%
! TGCAGGTTGACAGGGTTGAT+AGG - chr1_2:52266276-52266295 Msa0076290:CDS 50.0%
!! AGGTTGACAGGGTTGATAGG+AGG - chr1_2:52266279-52266298 Msa0076290:CDS 50.0%
!! ACAGGGTTGATAGGAGGCTT+TGG - chr1_2:52266285-52266304 Msa0076290:CDS 50.0%
CTGTGCCTTCTTTGTGGCAT+AGG - chr1_2:52266390-52266409 Msa0076290:CDS 50.0%
GCGTCGAAGAAGATTGTCCT+TGG + chr1_2:52266474-52266493 None:intergenic 50.0%
TTCTTCGACGCCACGTGATT+GGG - chr1_2:52266483-52266502 Msa0076290:CDS 50.0%
! GTTTTGTGTTGGATGTGGGG+AGG - chr1_2:52266517-52266536 Msa0076290:CDS 50.0%
!! GGCTTCAAAATAGTGGGTGG+AGG + chr1_2:52267128-52267147 None:intergenic 50.0%
! TTTGAAGCCATTCGCTGGTG+AGG - chr1_2:52267139-52267158 Msa0076290:CDS 50.0%
TTGAAGCCATTCGCTGGTGA+GGG - chr1_2:52267140-52267159 Msa0076290:CDS 50.0%
CTCGGTCTCATGCAGATTCT+AGG - chr1_2:52268101-52268120 Msa0076290:CDS 50.0%
!! GCCTCCTATCTTTCTGGCTT+TGG - chr1_2:52268202-52268221 Msa0076290:CDS 50.0%
AGATTCCTTTGCCAGGAGAG+CGG - chr1_2:52269050-52269069 Msa0076290:intron 50.0%
GCGCCCAGAGCTTATGAAAA+TGG - chr1_2:52269089-52269108 Msa0076290:CDS 50.0%
CATATCTCTCGGCCAATGCA+CGG + chr1_2:52269137-52269156 None:intergenic 50.0%
GAGTGATCCGTCATGCTCAT+CGG - chr1_2:52269169-52269188 Msa0076290:CDS 50.0%
CCAGAAATGTACGTGAAGGG+TGG + chr1_2:52269296-52269315 None:intergenic 50.0%
CCACCCTTCACGTACATTTC+TGG - chr1_2:52269293-52269312 Msa0076290:intron 50.0%
TTGCATGTTCTCGAGGGATG+AGG + chr1_2:52269428-52269447 None:intergenic 50.0%
! AGTTTGAAGGGCATGCTCGA+AGG - chr1_2:52269448-52269467 Msa0076290:CDS 50.0%
! GTTTGAAGGGCATGCTCGAA+GGG - chr1_2:52269449-52269468 Msa0076290:CDS 50.0%
! TTTGAAGGGCATGCTCGAAG+GGG - chr1_2:52269450-52269469 Msa0076290:CDS 50.0%
AGACATGAGCCTTAGTGCCA+CGG + chr1_2:52269527-52269546 None:intergenic 50.0%
GAAAGCCCTTGCCAAATTGG+AGG - chr1_2:52269599-52269618 Msa0076290:intron 50.0%
ACTCTCTTGTGCTGAAGAGG+AGG - chr1_2:52270193-52270212 Msa0076290:intron 50.0%
TGAAGTGCACCGTGTCAATG+AGG - chr1_2:52270568-52270587 Msa0076290:intron 50.0%
AAGCTATGATCGACGAGGTC+AGG - chr1_2:52270786-52270805 Msa0076290:intron 50.0%
! TCCACAGTGCTTTGGCTCAT+CGG - chr1_2:52270823-52270842 Msa0076290:intron 50.0%
! GCTGAGTTGGATAGTGTCAG+AGG - chr1_2:52270995-52271014 Msa0076290:intron 50.0%
AACATGCCAGTCTCTGCTTG+TGG - chr1_2:52271039-52271058 Msa0076290:intron 50.0%
CTCTGCAATGCTCTTCCCTT+TGG + chr1_2:52271432-52271451 None:intergenic 50.0%
CCTCCTCGTATTCTTGTTCC+CGG + chr1_2:52271528-52271547 None:intergenic 50.0%
TCTCTGGCACTCAACTAGGA+GGG + chr1_2:52271632-52271651 None:intergenic 50.0%
! TGAGTGCCAGAGACTTTTGG+AGG - chr1_2:52271639-52271658 Msa0076290:intron 50.0%
TGGATGCCTCCAAAAGTCTC+TGG + chr1_2:52271648-52271667 None:intergenic 50.0%
GAGTGAGGAGAAGGGTAACT+TGG - chr1_2:52272257-52272276 Msa0076290:intron 50.0%
GGTCCTTGTCTGAGGACAAT+TGG + chr1_2:52272737-52272756 None:intergenic 50.0%
AGCAAAGAGTTCTGCAGCCT+GGG + chr1_2:52272916-52272935 None:intergenic 50.0%
! TCTCTGGAGATGCAGACTCT+TGG - chr1_2:52273155-52273174 Msa0076290:intron 50.0%
TCATATGGAGTAAGCAGGGG+AGG - chr1_2:52273693-52273712 Msa0076290:intron 50.0%
ACAGAAGATTGCGGCAGAAC+CGG - chr1_2:52273770-52273789 Msa0076290:intron 50.0%
CTTTGACGACGATCTTCTGC+CGG + chr1_2:52273792-52273811 None:intergenic 50.0%
TCCTTCAGGAGATTCCTTGG+TGG - chr1_2:52273842-52273861 Msa0076290:intron 50.0%
TCCACCAAGGAATCTCCTGA+AGG + chr1_2:52273846-52273865 None:intergenic 50.0%
CCTTGGTGGAAAAGGAGTTG+GGG - chr1_2:52273856-52273875 Msa0076290:intron 50.0%
CTTGGTGGAAAAGGAGTTGG+GGG - chr1_2:52273857-52273876 Msa0076290:intron 50.0%
! AGAGCAGTTTGAAGCGTCTC+AGG - chr1_2:52274073-52274092 Msa0076290:intron 50.0%
ATTCTTCACCAGCTTGCGGT+TGG + chr1_2:52274123-52274142 None:intergenic 50.0%
!! AGATTGGAAGTGTCAGCAGG+AGG - chr1_2:52274195-52274214 Msa0076290:intron 50.0%
TGTCAGCAGGAGGAGAGTTT+CGG - chr1_2:52274205-52274224 Msa0076290:intron 50.0%
! CCGACTTTGATCGGCCATTT+TGG + chr1_2:52274339-52274358 None:intergenic 50.0%
! AAGTCGGAGAGTACGTTTGC+GGG - chr1_2:52274352-52274371 Msa0076290:intron 50.0%
ATGTGTAAGGCCACCCACTA+AGG - chr1_2:52274436-52274455 Msa0076290:intron 50.0%
TGTGTAAGGCCACCCACTAA+GGG - chr1_2:52274437-52274456 Msa0076290:intron 50.0%
GGCAGTGAGACTTCCGACAA+AGG - chr1_2:52262573-52262592 Msa0076290:three_prime_UTR 55.0%
GGGTGCAGATCCTCTCCATT+TGG - chr1_2:52262963-52262982 Msa0076290:CDS 55.0%
GGTCACCGTGCCAATGAAGA+AGG + chr1_2:52263182-52263201 None:intergenic 55.0%
TCATGAGGCTTTGCGCTCTC+AGG + chr1_2:52263775-52263794 None:intergenic 55.0%
AATCAAGGGAGAGGAGCCGT+TGG - chr1_2:52263795-52263814 Msa0076290:CDS 55.0%
GAGCCGTTGGAAAGCGGTTA+CGG - chr1_2:52263808-52263827 Msa0076290:CDS 55.0%
CGTTGGAAAGCGGTTACGGA+TGG - chr1_2:52263812-52263831 Msa0076290:CDS 55.0%
AACTATCAAGAGCCACCCCC+AGG - chr1_2:52264310-52264329 Msa0076290:CDS 55.0%
ATGACGAGACAGTGACCTGG+GGG + chr1_2:52264328-52264347 None:intergenic 55.0%
GATGACGAGACAGTGACCTG+GGG + chr1_2:52264329-52264348 None:intergenic 55.0%
GGATGACGAGACAGTGACCT+GGG + chr1_2:52264330-52264349 None:intergenic 55.0%
GGTATGCTTAACCGGTGCCT+CGG - chr1_2:52264814-52264833 Msa0076290:CDS 55.0%
CATGCTAACCGGTGTTTCCG+AGG + chr1_2:52264834-52264853 None:intergenic 55.0%
!! GATCAAGCACCGGCCAGATT+TGG - chr1_2:52265008-52265027 Msa0076290:CDS 55.0%
!! GAGTCAGGAGGTTGGTGGTT+TGG - chr1_2:52265800-52265819 Msa0076290:CDS 55.0%
!! GTCAGGAGGTTGGTGGTTTG+GGG - chr1_2:52265802-52265821 Msa0076290:CDS 55.0%
!! TCAGGAGGTTGGTGGTTTGG+GGG - chr1_2:52265803-52265822 Msa0076290:CDS 55.0%
!! AGGTTGGTGGTTTGGGGGTA+AGG - chr1_2:52265808-52265827 Msa0076290:CDS 55.0%
! GAAGTGGTGCTGGAGGTTGT+TGG - chr1_2:52265863-52265882 Msa0076290:CDS 55.0%
TCCACCAGACTGATGCCTCA+CGG + chr1_2:52265965-52265984 None:intergenic 55.0%
! TGAGGCATCAGTCTGGTGGA+GGG - chr1_2:52265965-52265984 Msa0076290:CDS 55.0%
GGAGGGAGATATCCGTGATG+CGG - chr1_2:52265982-52266001 Msa0076290:CDS 55.0%
GGAGATATCCGTGATGCGGT+CGG - chr1_2:52265986-52266005 Msa0076290:CDS 55.0%
CGGTCGGAAGAGTGGTTTAG+TGG - chr1_2:52266002-52266021 Msa0076290:CDS 55.0%
TGGACGGATGTTTGGGTAGG+TGG - chr1_2:52266068-52266087 Msa0076290:CDS 55.0%
TGCGTGGGAGGAAGAGTTAG+TGG - chr1_2:52266220-52266239 Msa0076290:CDS 55.0%
GCGTGGGAGGAAGAGTTAGT+GGG - chr1_2:52266221-52266240 Msa0076290:CDS 55.0%
CGTGGGAGGAAGAGTTAGTG+GGG - chr1_2:52266222-52266241 Msa0076290:CDS 55.0%
GTGGGAGGAAGAGTTAGTGG+GGG - chr1_2:52266223-52266242 Msa0076290:CDS 55.0%
!! GGGTTGATAGGAGGCTTTGG+CGG - chr1_2:52266288-52266307 Msa0076290:CDS 55.0%
! TGATAGGAGGCTTTGGCGGT+TGG - chr1_2:52266292-52266311 Msa0076290:CDS 55.0%
CGGTGTCTGTGCCTTCTTTG+TGG - chr1_2:52266384-52266403 Msa0076290:CDS 55.0%
! CTTGGCGCTTGGTTCGTGAT+AGG - chr1_2:52266441-52266460 Msa0076290:CDS 55.0%
TCGTGATAGGTTGCCCACCA+AGG - chr1_2:52266454-52266473 Msa0076290:CDS 55.0%
CTTCTTCGACGCCACGTGAT+TGG - chr1_2:52266482-52266501 Msa0076290:CDS 55.0%
TTGTGTTGGATGTGGGGAGG+TGG - chr1_2:52266520-52266539 Msa0076290:CDS 55.0%
TGAAGCCATTCGCTGGTGAG+GGG - chr1_2:52267141-52267160 Msa0076290:CDS 55.0%
TTTGTCCCCTCACCAGCGAA+TGG + chr1_2:52267149-52267168 None:intergenic 55.0%
! ACAGAAAGCGGTGATGGCGA+CGG - chr1_2:52268075-52268094 Msa0076290:CDS 55.0%
CATTTCCGCTCTCCTGGCAA+AGG + chr1_2:52269058-52269077 None:intergenic 55.0%
CCATGGTCCGATGAGCATGA+CGG + chr1_2:52269179-52269198 None:intergenic 55.0%
! AGTACGTGGCTCTGTCTCCA+TGG + chr1_2:52269262-52269281 None:intergenic 55.0%
!! TGGCGTGTTTCTGGAGTACG+TGG + chr1_2:52269276-52269295 None:intergenic 55.0%
! TTGAAGGGCATGCTCGAAGG+GGG - chr1_2:52269451-52269470 Msa0076290:CDS 55.0%
GAGCTAAACAATGGAGGCCG+TGG - chr1_2:52269507-52269526 Msa0076290:intron 55.0%
AGTCAGCGGCAAGAGCTCTA+AGG + chr1_2:52270490-52270509 None:intergenic 55.0%
!! ACCGATGAGCCAAAGCACTG+TGG + chr1_2:52270827-52270846 None:intergenic 55.0%
GTGCCGGGAACAAGAATACG+AGG - chr1_2:52271522-52271541 Msa0076290:intron 55.0%
CCGGGAACAAGAATACGAGG+AGG - chr1_2:52271525-52271544 Msa0076290:intron 55.0%
GTCTCTGGCACTCAACTAGG+AGG + chr1_2:52271633-52271652 None:intergenic 55.0%
ACTAAGGGTTGGGCTGCATC+AGG - chr1_2:52271756-52271775 Msa0076290:intron 55.0%
GAGAACTTGACGAGGAGTCC+AGG - chr1_2:52271998-52272017 Msa0076290:intron 55.0%
GAACGAATGTCTCGTGGGAC+AGG + chr1_2:52272299-52272318 None:intergenic 55.0%
CAGCAAAGAGTTCTGCAGCC+TGG + chr1_2:52272917-52272936 None:intergenic 55.0%
TGGAAGTCGAGGAGAGGATC+TGG + chr1_2:52273471-52273490 None:intergenic 55.0%
AGGTCTTGGAAGTCGAGGAG+AGG + chr1_2:52273477-52273496 None:intergenic 55.0%
TCTGCAGGTCTTGGAAGTCG+AGG + chr1_2:52273482-52273501 None:intergenic 55.0%
TCGACTTCCAAGACCTGCAG+AGG - chr1_2:52273481-52273500 Msa0076290:intron 55.0%
ACTTCCAAGACCTGCAGAGG+AGG - chr1_2:52273484-52273503 Msa0076290:intron 55.0%
TGATCCTCCTCTGCAGGTCT+TGG + chr1_2:52273491-52273510 None:intergenic 55.0%
! CCCCAACTCCTTTTCCACCA+AGG + chr1_2:52273859-52273878 None:intergenic 55.0%
AGGGTGCACTGTCTTCAGCT+GGG - chr1_2:52274150-52274169 Msa0076290:intron 55.0%
GTTTCGGAACAAGCGCAGAG+AGG - chr1_2:52274221-52274240 Msa0076290:intron 55.0%
ATCCCGACCCTCTACTACGG+TGG - chr1_2:52263451-52263470 Msa0076290:CDS 60.0%
CATCGCGCCACCGTAGTAGA+GGG + chr1_2:52263461-52263480 None:intergenic 60.0%
TCATCGCGCCACCGTAGTAG+AGG + chr1_2:52263462-52263481 None:intergenic 60.0%
GGAGAGGAGCCGTTGGAAAG+CGG - chr1_2:52263802-52263821 Msa0076290:CDS 60.0%
GAAAGCGGTTACGGATGGCG+TGG - chr1_2:52263817-52263836 Msa0076290:CDS 60.0%
GGGATGACGAGACAGTGACC+TGG + chr1_2:52264331-52264350 None:intergenic 60.0%
AACCGGTGCCTCGGAAACAC+CGG - chr1_2:52264823-52264842 Msa0076290:CDS 60.0%
AACCGGTGTTTCCGAGGCAC+CGG + chr1_2:52264828-52264847 None:intergenic 60.0%
GTTGTCTTTCGGTGGGCGTC+TGG - chr1_2:52265612-52265631 Msa0076290:CDS 60.0%
TGTCGGAGTCAGGAGGTTGG+TGG - chr1_2:52265795-52265814 Msa0076290:CDS 60.0%
! GTGGTGCTGGAGGTTGTTGG+TGG - chr1_2:52265866-52265885 Msa0076290:CDS 60.0%
!! AGGGTGGTGTCGGCTCGTTA+TGG - chr1_2:52265909-52265928 Msa0076290:CDS 60.0%
!! GGGTGGTGTCGGCTCGTTAT+GGG - chr1_2:52265910-52265929 Msa0076290:CDS 60.0%
!! GGTGGTGTCGGCTCGTTATG+GGG - chr1_2:52265911-52265930 Msa0076290:CDS 60.0%
! TCGGCTCGTTATGGGGTGGA+GGG - chr1_2:52265918-52265937 Msa0076290:CDS 60.0%
GGAGGGTGGTCATGTCAGAG+AGG - chr1_2:52265935-52265954 Msa0076290:CDS 60.0%
GGTGGTCATGTCAGAGAGGC+TGG - chr1_2:52265939-52265958 Msa0076290:CDS 60.0%
! GTGAGGCATCAGTCTGGTGG+AGG - chr1_2:52265964-52265983 Msa0076290:CDS 60.0%
CCACTCTTCCGACCGCATCA+CGG + chr1_2:52265997-52266016 None:intergenic 60.0%
! GTTAGTCGCGTGGTGGGAGA+TGG - chr1_2:52266029-52266048 Msa0076290:CDS 60.0%
GAGACGGGGGTTGTTTGCGT+GGG - chr1_2:52266205-52266224 Msa0076290:CDS 60.0%
CCGTCATGCTCATCGGACCA+TGG - chr1_2:52269176-52269195 Msa0076290:CDS 60.0%
CGTGAAGGGTGGCGTGTTTC+TGG + chr1_2:52269285-52269304 None:intergenic 60.0%
CAATGGAGGCCGTGGCACTA+AGG - chr1_2:52269515-52269534 Msa0076290:intron 60.0%
! GTGCTGAAGAGGAGGTGCGT+AGG - chr1_2:52270201-52270220 Msa0076290:intron 60.0%
GGTGGAAAAGGAGTTGGGGG+TGG - chr1_2:52273860-52273879 Msa0076290:intron 60.0%
GTTCGATGCCAACCGCAAGC+TGG - chr1_2:52274112-52274131 Msa0076290:intron 60.0%
! GAGGGTGCACTGTCTTCAGC+TGG - chr1_2:52274149-52274168 Msa0076290:intron 60.0%
CGCCACCGTAGTAGAGGGTC+GGG + chr1_2:52263456-52263475 None:intergenic 65.0%
GCGCCACCGTAGTAGAGGGT+CGG + chr1_2:52263457-52263476 None:intergenic 65.0%
ACGAGACAGTGACCTGGGGG+TGG + chr1_2:52264325-52264344 None:intergenic 65.0%
!! GGTGTCGGCTCGTTATGGGG+TGG - chr1_2:52265914-52265933 Msa0076290:CDS 65.0%
!! GTCGGCTCGTTATGGGGTGG+AGG - chr1_2:52265917-52265936 Msa0076290:CDS 65.0%
GCTCGTTATGGGGTGGAGGG+TGG - chr1_2:52265921-52265940 Msa0076290:CDS 65.0%
! TGTCAGAGAGGCTGGCCGTG+AGG - chr1_2:52265947-52265966 Msa0076290:CDS 65.0%
! CTGGCCGTGAGGCATCAGTC+TGG - chr1_2:52265958-52265977 Msa0076290:CDS 65.0%
! GCCGTGAGGCATCAGTCTGG+TGG - chr1_2:52265961-52265980 Msa0076290:CDS 65.0%
CCGTGATGCGGTCGGAAGAG+TGG - chr1_2:52265994-52266013 Msa0076290:CDS 65.0%
AGGTTGGGGGTTAGAGGGGG+CGG - chr1_2:52266172-52266191 Msa0076290:CDS 65.0%
GGAGACGGGGGTTGTTTGCG+TGG - chr1_2:52266204-52266223 Msa0076290:CDS 65.0%
ACGGGGGTTGTTTGCGTGGG+AGG - chr1_2:52266208-52266227 Msa0076290:CDS 65.0%
! GGGGGGGGAGTGTAGACCAC+AGG - chr1_2:52265742-52265761 Msa0076290:CDS 70.0%
! GGTTAGAGGGGGCGGCTTGG+AGG - chr1_2:52266180-52266199 Msa0076290:CDS 70.0%
! TAGAGGGGGCGGCTTGGAGG+TGG - chr1_2:52266183-52266202 Msa0076290:CDS 70.0%
! GGGCGGCTTGGAGGTGGAGA+CGG - chr1_2:52266189-52266208 Msa0076290:CDS 70.0%
! GGCGGCTTGGAGGTGGAGAC+GGG - chr1_2:52266190-52266209 Msa0076290:CDS 70.0%
! GCGGCTTGGAGGTGGAGACG+GGG - chr1_2:52266191-52266210 Msa0076290:CDS 70.0%
! CGGCTTGGAGGTGGAGACGG+GGG - chr1_2:52266192-52266211 Msa0076290:CDS 70.0%
! CGGTGATGGCGACGGCGACT+CGG - chr1_2:52268083-52268102 Msa0076290:CDS 70.0%
GGGGGTTAGAGGGGGCGGCT+TGG - chr1_2:52266177-52266196 Msa0076290:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 52262543 52274736 52262543 ID=Msa0076290;Name=Msa0076290
chr1_2 mRNA 52262543 52274736 52262543 ID=Msa0076290-mRNA-1;Parent=Msa0076290;Name=Msa0076290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0.4|0.8|1|1|5|270|1904
chr1_2 exon 52262543 52263883 52262543 ID=Msa0076290-mRNA-1:exon:16138;Parent=Msa0076290-mRNA-1
chr1_2 exon 52264068 52268278 52264068 ID=Msa0076290-mRNA-1:exon:16137;Parent=Msa0076290-mRNA-1
chr1_2 exon 52269083 52269272 52269083 ID=Msa0076290-mRNA-1:exon:16136;Parent=Msa0076290-mRNA-1
chr1_2 exon 52269438 52269518 52269438 ID=Msa0076290-mRNA-1:exon:16135;Parent=Msa0076290-mRNA-1
chr1_2 exon 52274575 52274736 52274575 ID=Msa0076290-mRNA-1:exon:16134;Parent=Msa0076290-mRNA-1
chr1_2 CDS 52274575 52274736 52274575 ID=Msa0076290-mRNA-1:cds;Parent=Msa0076290-mRNA-1
chr1_2 CDS 52269438 52269518 52269438 ID=Msa0076290-mRNA-1:cds;Parent=Msa0076290-mRNA-1
chr1_2 CDS 52269083 52269272 52269083 ID=Msa0076290-mRNA-1:cds;Parent=Msa0076290-mRNA-1
chr1_2 CDS 52264068 52268278 52264068 ID=Msa0076290-mRNA-1:cds;Parent=Msa0076290-mRNA-1
chr1_2 CDS 52262813 52263883 52262813 ID=Msa0076290-mRNA-1:cds;Parent=Msa0076290-mRNA-1
chr1_2 three_prime_UTR 52262543 52262812 52262543 ID=Msa0076290-mRNA-1:three_prime_utr;Parent=Msa0076290-mRNA-1
Gene Sequence

>Msa0076290

ATGATATACTTCATTCTTATTACAGATGGTGGCAGTGAGACTTCCGACAAAGGTGGTGCTCTTTTCTGCTTAGGAGTTTTAATCACAGATGGAAAAGCAGTCCTTTCCTTCATCAAGATTGATGTGGTGAACCATGCTTTTGGGGAAATTTTGCTTCTAATGTTTGTATTCATTCCAGCATATCAGAATTTTGTTCATTCAGCTTTGGAATTTGAGAAAGAAAATCCAAGTTCAACCAATCAGTCAAAAGCATATGAAGATTTTGCCTCTTCATGTCTTTCAAGGATTAATAAAGTACTTACAACAATAGAACAGAAAGCGGTGATGGCGACGGCGACTCGGTCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCCAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGATATGGACGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCGGAAATGTACTATAAAAAGCGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGTGCATTGGCCGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCTCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCTGTGATGATTACAGACGATTTACCAATGGTTACTTCCATGGAGACAGAGCCACGTACTCCAGAAACACGCCACCCTTCACGTACATTTCTGGACTCTGATGAATCAGAAAAAGATGCTCATTTTATGAAAAGAAATGGAGCAGATAGTGAAGAACCGAATTCTGCTTTGAACAAGACAGGTTTAAGACAACTCAATGATCTCCTCATCCCTCGAGAACATGCAAAGTTTGAAGGGCATGCTCGAAGGGGGCTCAATTTTTTAGAGACGCAGGAGGAGAATAGTGAGCTAAACAATGGAGGCCGTGGCACTAAGGCTCATGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCCGAAGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTGGAGGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTGAAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTATCAAAGAGTCGATGGACGAGCAAGCAAAGCAGAAGCTGAAGTTCAAGACTTGAAGGAAGCGGTAATCAAAATACAGGCGGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACAGATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAGTTCAACGAACGTGCTACTAGAGCTGAAATTGAAGTTGAGTCTTTGAAGCAGGACCTTGTTCGAGTAGAATCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAATGCTTGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAAAGTTAGAAGGATTAATGAGCAAGCTAATTTAGCTGAAAATGAAATCGAAGCTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTTCAATATCAGCAATGCTTGGAGATACTTTCCAGTCTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGACGATGAGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTCTTCTTTTGGAAACATCAAATCACACTCTACAGTCTGAATTACAGTCTTTGGCACACAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGGAAGAATTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAACATTTGCATTCTCAATCTCAGGAAGACCTTAGAGCTCTTGCCGCTGACTTTCACAATAAAGTGGAAATCCTAGGGAATGTCGAATCACATAAGCAGTCTCTAGAAGATGAAGTGCACCGTGTCAATGAGGAAAACAAAATTCTAAATGAGCTCAAGATTTCTTCATCTTTGTCCATACAAACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATATGAATAAAAAACATGAAGCTATGATCGACGAGGTCAGGTCAGCTGATTTAGATCCACAGTGCTTTGGCTCATCGGTGAAACAATTGCAAGACGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGAAAAAGATGAGAAACTGGCTCTTTTGGTAAAATTGGAAACCATGGAGAAGCTTTTGGAGAAGAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAAGTAAATGTGTTGGAAGGAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCCCAATTACAAGCCACAACTGAAAAGCTTGAGAAGCTCTCGGAAAATAACAACCTTTTGGAAAATTCACTATTTGATGTCAGTACCGAACTTGATGTACTAAGAGGGAAGTCAAAGATCTTAGAAGACGCGTGCCAGTCACTTGACCATGAAAAGTCCAGTATCTTTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACTCAGCAAATTCTGAAAGATCTTGAAAAGCAACACAGTGAATTGGAACTAATGCATTTGGAACTAAAAGGAGAAAGGGAGTCGTCACTTAAAAAGGTAGAAGAGCTACTGGTTTCTCTATATTCCCAAAGGGAAGAGCATTGCAGAGTCTTGAAGTTGAATGAAGATGAAGTGGCCAACAAGGAATTACAAATTGATATTCTGAAAGAAGATGCAAAGTGCCGGGAACAAGAATACGAGGAGGAACTGGATAGATCTCTAAATGCTCAGATTGAAATTTTCATCTTGCAGAAGTGTATCCAAGATTTGGAGAAAAGGAACTTTTCCCTCCTAGTTGAGTGCCAGAGACTTTTGGAGGCATCCAAAATGTCTGACAAAATTATTTCTAAATTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCTGAGAAAATTAAAATACTAAGGGTTGGGCTGCATCAGGTGTTGAAGACTCTTGACATTCACGGCGAGAATTTCTTTGAAGATATGCTTGACGAAGACCGAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAGAAGTCTTTTGACACGATTTTCAAGGAAAGCCACCACTTGGCCATTGAGAATTCAGTTCTGATTACATTTCTTGAGCAGTTGAAACTGACTGTAGAAAATCTTGTGATAGAAAAACGAGAACTTGACGAGGAGTCCAGGATACAGTCTAAGCAGTTCACGGCATTGCAAATAGAGTTCCAAAAGGTATTGGAAAAGAATCAGGAGTTGAAGTTGGCAATAAGCAAAGGAGAAGAGAGAATGGAAGCTATGACAACAGAAATAGTTAATCTACGCAAAGAGCTATCAAACTTTGAAAAGAGCCACAACAACTTACAGGAAAAAAGTTGCACGATACTTGAAGAGAAAAACTCCTTGTTGGGAAAATTTGAAGATCTGAGTGAGGAGAAGGGTAACTTGGAAGAAGAACTTTGTGTCCTGTCCCACGAGACATTCGTTCAATCTAATATTTCTGCGATTTACCAGAATATTATCTCTGAAAAACTCCAGGAACTTAAACAGCTTGGTCAAGAACTTGATAAGCTCGGTTCAGAAAATAATAACCTGGAGGACAGATTGAAGATAATGGCACACAAATTAGAAAGTGAAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTGAAGTCAAATGTTGAATTGAATTTAGTTGAATCTATCAATGATCAATTGACTTGTCAGATTAGGAATGAAAGGGACATGTTGTGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACCGAGAAAACAGAATTGCAAAGAACGGCGGAAGATCTGAAGATTAGATATGATGATGCCAAGGGGAAACTTGAAGAGCAAGCTAATCAAATTTTCCAATTGTCCTCAGACAAGGACCGTCAAAATGAAGAGCTTGGATGCCTAAGTGAAGTGAACCAGAAATTGGAGTCTGAAATGAAGTTCCTACACCAAGAACTTGAAGAAACTAAGCTAAGGGAAGAGAAGCTAAGTTATGAAGTACATGAAGGAATAAATGAGATTGAACAATGGGAAACCCAGGCTGCAGAACTCTTTGCTGAACTGCAGGTTTCTGCTGTCAATGAAACACTGCTTCAAGGGAAGGCCTTTGAGCTAGCTGATACATGTGAGCATCTTGAGAGCATAAACTACTCGAAAGACATGGAAAGAGAACAGCTGAAAGAATTAGTTAGCAAGTTGGAAGGTGAAAATGGGAAAATGTGTGATCAATTAGCTGCATATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTTACATCTCTGGAGATGCAGACTCTTGGAAATGCAAAACATCATGACTATGAAAAACCAGAGGTTAAAAATTTGGTGAATCACCAATACAATGAAAATGGTCAACAAGTAGATGAAGATCAATCTGTTACGGCACCAGATCCTCTCCTCGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAATTTTAACGCAAGTTCCAAAGCCAATGTTGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAAATGAGGAGTTTAAGGCCAGATAATCCTGCAACTGAGATTGAAGTGCTTCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATATGGAGTAAGCAGGGGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACTTCTGATAAGACACAGAAGATTGCGGCAGAACCGGCAGAAGATCGTCGTCAAAGAAGAGCATCCAAGGAAACATACAACAAACATCCTTCAGGAGATTCCTTGGTGGAAAAGGAGTTGGGGGTGGACAAGTTAGAGATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGACAACAAGAGTAGGGTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACGAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTATTGAGAAGAGTACAAAGGGAAAAAGTGCCGAGTATGATACCGTTAAAGAGCAGTTTGAAGCGTCTCAGGAGACTGTAATGAAGTTGTTCGATGCCAACCGCAAGCTGGTGAAGAATGTAGAAGAGGGTGCACTGTCTTCAGCTGGGAGAGCTTCATCAGAATCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCGGAACAAGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAGGTTCAAAGACTTCAGTTTCTTCTTTTGAAACTCAATGATGCAAAAGAAAGCAAAGAGAAAACCAAAATGGCCGATCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGCGACAAAAACCAACAACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGGCCACCCACTAAGGGTGATTGA
Protein sequence

>Msa0076290

MIYFILITDGGSETSDKGGALFCLGVLITDGKAVLSFIKIDVVNHAFGEILLLMFVFIPAYQNFVHSALEFEKENPSSTNQSKAYEDFASSCLSRINKVLTTIEQKAVMATATRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPVMITDDLPMVTSMETEPRTPETRHPSRTFLDSDESEKDAHFMKRNGADSEEPNSALNKTGLRQLNDLLIPREHAKFEGHARRGLNFLETQEENSELNNGGRGTKAHVLSESERVTKAEAEISALKKALAKLEDEKEAGLLQYQQSLKKLSNLELEVSSAQENYQRVDGRASKAEAEVQDLKEAVIKIQAEREATLLQYQECLEKITDLEKNISFAQKDAGEFNERATRAEIEVESLKQDLVRVESEKEAALVQYKQCLETLSKLEERLKESEEKVRRINEQANLAENEIEALKLEVTKLNEEKEDAALQYQQCLEILSSLEHKLSCAEEEVRRLNSKIDDEVEKLHSSEQKCLLLETSNHTLQSELQSLAHKMGSQSEELNEKQEELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEDLRALAADFHNKVEILGNVESHKQSLEDEVHRVNEENKILNELKISSSLSIQTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHEAMIDEVRSADLDPQCFGSSVKQLQDENSKLKETCEAEKDEKLALLVKLETMEKLLEKNSVLENSISDLNAELDSVRGKVNVLEGTCQSLLVEKSTLAAEKATLFSQLQATTEKLEKLSENNNLLENSLFDVSTELDVLRGKSKILEDACQSLDHEKSSIFSEKEALVSELNTTQQILKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVLKLNEDEVANKELQIDILKEDAKCREQEYEEELDRSLNAQIEIFILQKCIQDLEKRNFSLLVECQRLLEASKMSDKIISKLETENIQKQDDVDSLSEKIKILRVGLHQVLKTLDIHGENFFEDMLDEDRTLLNHIHGKLKERKKSFDTIFKESHHLAIENSVLITFLEQLKLTVENLVIEKRELDEESRIQSKQFTALQIEFQKVLEKNQELKLAISKGEERMEAMTTEIVNLRKELSNFEKSHNNLQEKSCTILEEKNSLLGKFEDLSEEKGNLEEELCVLSHETFVQSNISAIYQNIISEKLQELKQLGQELDKLGSENNNLEDRLKIMAHKLESEEMENSHLKELFVKSNVELNLVESINDQLTCQIRNERDMLCQKEKVLSEAAKTFHALHTEKTELQRTAEDLKIRYDDAKGKLEEQANQIFQLSSDKDRQNEELGCLSEVNQKLESEMKFLHQELEETKLREEKLSYEVHEGINEIEQWETQAAELFAELQVSAVNETLLQGKAFELADTCEHLESINYSKDMEREQLKELVSKLEGENGKMCDQLAAYVPAISALNDCVTSLEMQTLGNAKHHDYEKPEVKNLVNHQYNENGQQVDEDQSVTAPDPLLDFQDLQRRINEISMAVKNFNASSKANVEMREIQEAKEIEQKMRSLRPDNPATEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKIAAEPAEDRRQRRASKETYNKHPSGDSLVEKELGVDKLEISRRMSRPREEDNKSRVLERLDSDAQKLTNLQITIQDLMKKVETIEKSTKGKSAEYDTVKEQFEASQETVMKLFDANRKLVKNVEEGALSSAGRASSESDEIGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDAKESKEKTKMADQSRRVRLRDYLYGATKTNNQKKKKTPFCACVRPPTKGD*