AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0464860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0464860 MtrunA17_Chr3g0116631 89.153 295 24 3 1 291 1 291 0.0 523
Msa0464860 MtrunA17_Chr4g0058151 59.091 308 96 7 1 288 1 298 5.75e-110 320
Msa0464860 MtrunA17_Chr1g0181111 42.617 298 126 6 14 288 3 278 2.44e-59 191
Msa0464860 MtrunA17_Chr7g0267571 36.154 260 144 7 39 285 41 291 9.15e-43 149
Msa0464860 MtrunA17_Chr7g0267571 37.079 89 54 1 102 190 207 293 2.28e-11 63.5
Msa0464860 MtrunA17_Chr1g0168601 43.452 168 79 3 121 285 78 232 5.48e-41 142
Msa0464860 MtrunA17_Chr1g0168601 41.860 86 50 0 105 190 149 234 1.43e-13 68.9
Msa0464860 MtrunA17_Chr1g0177101 37.705 183 112 1 104 284 103 285 1.81e-38 137
Msa0464860 MtrunA17_Chr3g0087481 37.696 191 109 2 98 282 49 235 9.83e-34 123
Msa0464860 MtrunA17_Chr3g0087481 44.444 81 44 1 204 283 57 137 9.42e-16 75.1
Msa0464860 MtrunA17_Chr4g0035001 54.545 77 35 0 207 283 7 83 1.43e-25 99.8
Msa0464860 MtrunA17_Chr4g0035001 41.026 78 46 0 108 185 5 82 1.39e-13 67.4
Msa0464860 MtrunA17_Chr4g0058141 45.192 104 55 2 152 254 2 104 1.27e-23 92.8
Msa0464860 MtrunA17_Chr4g0035051 49.351 77 39 0 207 283 9 85 2.24e-23 92.4
Msa0464860 MtrunA17_Chr4g0035051 36.893 103 58 1 108 210 7 102 4.29e-14 67.4
Msa0464860 MtrunA17_Chr5g0411091 38.547 179 105 4 111 287 98 273 1.16e-22 95.5
Msa0464860 MtrunA17_Chr4g0061451 47.619 84 44 0 204 287 40 123 1.56e-22 94.4
Msa0464860 MtrunA17_Chr4g0061451 43.038 79 45 0 110 188 43 121 4.68e-14 70.9
Msa0464860 MtrunA17_Chr3g0132451 32.759 174 108 5 110 280 90 257 1.59e-22 94.7
Msa0464860 MtrunA17_Chr3g0110211 33.152 184 112 2 107 289 23 196 3.22e-22 95.1
Msa0464860 MtrunA17_Chr4g0035031 50.649 77 38 0 207 283 9 85 2.74e-21 89.0
Msa0464860 MtrunA17_Chr4g0035031 41.026 78 46 0 108 185 7 84 2.86e-13 67.0
Msa0464860 MtrunA17_Chr2g0328791 32.967 182 113 4 111 289 17 192 7.83e-21 91.7
Msa0464860 MtrunA17_Chr3g0121631 50.000 80 39 1 207 286 37 115 2.87e-20 85.1
Msa0464860 MtrunA17_Chr3g0121631 37.500 88 54 1 101 188 28 114 5.08e-12 62.8
Msa0464860 MtrunA17_Chr4g0074711 31.579 190 117 5 103 285 64 247 3.32e-20 89.7
Msa0464860 MtrunA17_Chr4g0074711 26.630 184 111 5 111 280 169 342 4.53e-12 65.9
Msa0464860 MtrunA17_Chr4g0045221 34.021 194 113 7 106 290 112 299 3.35e-20 90.1
Msa0464860 MtrunA17_Chr2g0288251 29.949 197 122 5 100 285 44 235 4.07e-20 89.4
Msa0464860 MtrunA17_Chr2g0288251 28.729 181 110 4 111 280 157 329 7.96e-13 68.2
Msa0464860 MtrunA17_Chr3g0086861 45.263 95 50 1 197 289 33 127 5.24e-20 89.4
Msa0464860 MtrunA17_Chr3g0086861 45.455 77 42 0 110 186 45 121 1.02e-13 70.9
Msa0464860 MtrunA17_Chr3g0119311 44.444 81 45 0 207 287 37 117 6.04e-20 84.0
Msa0464860 MtrunA17_Chr4g0070231 32.558 172 104 2 111 282 48 207 1.13e-19 88.2
Msa0464860 MtrunA17_Chr3g0120721 27.222 180 120 3 109 288 18 186 5.57e-19 85.9
Msa0464860 MtrunA17_Chr7g0219021 40.964 83 49 0 207 289 41 123 9.92e-19 83.6
Msa0464860 MtrunA17_Chr7g0219021 42.857 84 47 1 109 192 40 122 5.19e-14 70.5
Msa0464860 MtrunA17_Chr3g0101061 32.222 180 112 4 109 282 40 215 3.07e-18 84.7
Msa0464860 MtrunA17_Chr3g0101061 36.709 79 48 1 207 285 41 117 5.06e-11 63.2
Msa0464860 MtrunA17_Chr2g0278661 47.436 78 41 0 206 283 7 84 5.61e-18 81.3
Msa0464860 MtrunA17_Chr2g0278661 38.095 84 52 0 107 190 5 88 5.04e-13 67.4
Msa0464860 MtrunA17_Chr6g0466451 32.821 195 116 6 106 288 102 293 1.11e-17 82.8
Msa0464860 MtrunA17_Chr6g0466451 28.177 181 121 4 109 288 15 187 5.16e-11 63.2
Msa0464860 MtrunA17_Chr6g0465631 32.821 195 116 6 106 288 102 293 1.21e-17 82.8
Msa0464860 MtrunA17_Chr6g0465631 28.177 181 121 4 109 288 15 187 5.60e-11 62.8
Msa0464860 MtrunA17_Chr6g0466501 30.000 190 111 4 107 290 23 196 1.73e-17 82.4
Msa0464860 MtrunA17_Chr6g0466501 30.052 193 121 6 106 288 197 385 1.15e-15 77.0
Msa0464860 MtrunA17_Chr2g0290191 29.744 195 118 6 109 289 4 193 2.24e-17 82.0
Msa0464860 MtrunA17_Chr3g0133651 29.121 182 121 3 111 289 95 271 2.28e-17 81.6
Msa0464860 MtrunA17_Chr3g0133651 25.275 182 122 3 111 284 189 364 3.71e-12 66.2
Msa0464860 MtrunA17_Chr5g0447761 31.492 181 116 3 107 282 4 181 3.34e-17 81.3
Msa0464860 MtrunA17_Chr4g0050781 45.556 90 47 1 201 290 2 89 4.71e-17 78.2
Msa0464860 MtrunA17_Chr4g0050781 36.585 82 52 0 107 188 5 86 1.31e-11 62.8
Msa0464860 MtrunA17_Chr1g0210241 44.048 84 45 1 207 290 8 89 1.03e-16 78.2
Msa0464860 MtrunA17_Chr1g0210241 34.146 82 54 0 107 188 5 86 4.58e-11 62.0
Msa0464860 MtrunA17_Chr1g0153871 30.526 190 115 4 107 289 95 274 1.23e-16 79.7
Msa0464860 MtrunA17_Chr1g0153871 24.609 256 161 7 42 284 131 367 1.41e-14 73.6
Msa0464860 MtrunA17_Chr3g0139111 29.070 172 110 2 111 282 62 221 1.38e-16 79.3
Msa0464860 MtrunA17_Chr3g0139111 25.510 196 117 2 110 280 146 337 5.65e-13 68.6
Msa0464860 MtrunA17_Chr6g0465751 29.319 191 125 5 106 288 197 385 1.75e-16 79.3
Msa0464860 MtrunA17_Chr6g0465751 28.421 190 114 4 107 290 23 196 5.06e-16 78.2
Msa0464860 MtrunA17_Chr7g0265341 27.222 180 124 4 109 288 158 330 7.06e-16 77.8
Msa0464860 MtrunA17_Chr7g0265341 28.649 185 123 4 111 288 251 433 2.77e-14 73.2
Msa0464860 MtrunA17_Chr7g0265341 27.528 178 115 4 105 279 64 230 1.85e-12 67.4
Msa0464860 MtrunA17_Chr1g0179701 29.282 181 121 3 108 288 149 322 9.35e-16 77.4
Msa0464860 MtrunA17_Chr1g0179701 27.869 183 122 3 97 279 50 222 1.33e-15 76.6
Msa0464860 MtrunA17_Chr1g0179701 29.189 185 119 5 111 287 243 423 2.89e-13 69.7
Msa0464860 MtrunA17_Chr4g0044541 31.250 176 99 4 111 280 36 195 9.47e-16 77.4
Msa0464860 MtrunA17_Chr4g0044541 28.571 189 118 5 111 288 215 397 3.19e-13 69.7
Msa0464860 MtrunA17_Chr4g0044541 26.519 181 126 4 108 288 121 294 8.89e-12 65.5
Msa0464860 MtrunA17_Chr6g0465691 30.052 193 121 6 106 288 115 303 1.25e-15 77.0
Msa0464860 MtrunA17_Chr4g0018581 48.000 75 39 0 208 282 453 527 1.79e-15 76.6
Msa0464860 MtrunA17_Chr0c09g0493511 28.497 193 124 6 106 288 115 303 3.36e-15 75.5
Msa0464860 MtrunA17_Chr3g0134141 28.696 230 147 6 67 288 167 387 3.56e-15 75.5
Msa0464860 MtrunA17_Chr3g0134141 27.429 175 105 4 111 279 26 184 1.51e-13 70.9
Msa0464860 MtrunA17_Chr8g0344491 29.050 179 115 2 104 282 57 223 6.92e-15 74.3
Msa0464860 MtrunA17_Chr7g0219031 39.241 79 43 1 199 272 28 106 1.70e-14 68.6
Msa0464860 MtrunA17_Chr3g0135111 29.082 196 122 5 107 290 8 198 1.75e-14 72.8
Msa0464860 MtrunA17_Chr1g0186351 27.807 187 121 3 107 282 4 187 3.25e-14 72.4
Msa0464860 MtrunA17_Chr1g0153181 27.647 170 111 3 111 279 34 192 5.55e-14 72.0
Msa0464860 MtrunA17_Chr1g0153181 28.421 190 118 5 111 288 213 396 3.27e-13 69.7
Msa0464860 MtrunA17_Chr1g0212611 29.480 173 115 4 110 282 221 386 6.25e-14 71.6
Msa0464860 MtrunA17_Chr6g0449481 23.267 202 141 4 87 288 26 213 8.79e-14 70.9
Msa0464860 MtrunA17_Chr8g0360551 30.058 173 115 4 110 282 74 240 1.00e-13 70.9
Msa0464860 MtrunA17_Chr5g0402191 32.000 150 93 3 107 256 2 142 1.04e-13 70.9
Msa0464860 MtrunA17_Chr4g0045921 26.374 182 117 4 110 287 77 245 1.45e-13 70.1
Msa0464860 MtrunA17_Chr4g0026301 25.767 163 101 4 93 252 93 238 1.88e-13 70.5
Msa0464860 MtrunA17_Chr1g0201151 30.208 192 122 5 106 288 206 394 2.89e-13 70.1
Msa0464860 MtrunA17_Chr1g0201151 25.967 181 112 4 105 279 26 190 3.49e-11 63.5
Msa0464860 MtrunA17_Chr8g0375101 30.872 149 94 3 107 255 2 141 3.05e-13 69.3
Msa0464860 MtrunA17_Chr1g0201001 38.961 77 47 0 208 284 31 107 1.74e-12 67.4
Msa0464860 MtrunA17_Chr4g0068631 29.630 189 114 4 109 289 88 265 2.32e-12 67.4
Msa0464860 MtrunA17_Chr7g0266751 34.146 82 54 0 207 288 33 114 7.15e-12 62.0
Msa0464860 MtrunA17_Chr4g0031091 32.051 78 53 0 207 284 34 111 8.96e-12 60.8
Msa0464860 MtrunA17_Chr4g0013971 24.742 194 121 4 110 279 94 286 1.04e-11 65.1
Msa0464860 MtrunA17_Chr4g0042161 37.931 87 54 0 203 289 48 134 5.71e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0464860 AT5G50250.1 57.947 302 100 8 1 288 1 289 1.17e-106 312
Msa0464860 AT4G24770.1 61.538 273 78 6 41 289 59 328 1.34e-105 310
Msa0464860 AT4G24770.2 61.538 273 78 6 41 289 59 328 1.34e-105 310
Msa0464860 AT2G37220.1 52.607 211 78 2 103 291 79 289 1.47e-65 207
Msa0464860 AT1G60000.1 36.879 282 141 6 15 285 1 256 3.68e-47 159
Msa0464860 AT3G52380.1 35.336 283 159 9 20 287 27 300 1.03e-43 152
Msa0464860 AT3G52150.2 41.711 187 101 4 103 282 68 253 3.36e-36 130
Msa0464860 AT3G52150.2 39.785 93 52 1 195 283 61 153 1.38e-17 80.9
Msa0464860 AT3G52150.1 41.711 187 101 4 103 282 68 253 3.36e-36 130
Msa0464860 AT3G52150.1 39.785 93 52 1 195 283 61 153 1.38e-17 80.9
Msa0464860 AT2G35410.1 32.685 257 153 8 30 277 21 266 4.09e-29 113
Msa0464860 AT3G53460.1 61.176 85 33 0 207 291 258 342 1.68e-28 112
Msa0464860 AT3G53460.1 55.963 109 46 1 92 200 84 190 9.60e-28 110
Msa0464860 AT3G53460.1 45.455 88 48 0 201 288 94 181 3.31e-17 80.9
Msa0464860 AT3G53460.1 42.529 87 47 1 110 196 258 341 3.49e-15 75.1
Msa0464860 AT3G53460.3 61.176 85 33 0 207 291 258 342 1.68e-28 112
Msa0464860 AT3G53460.3 55.963 109 46 1 92 200 84 190 9.60e-28 110
Msa0464860 AT3G53460.3 45.455 88 48 0 201 288 94 181 3.31e-17 80.9
Msa0464860 AT3G53460.3 42.529 87 47 1 110 196 258 341 3.49e-15 75.1
Msa0464860 AT3G53460.2 61.176 85 33 0 207 291 258 342 1.68e-28 112
Msa0464860 AT3G53460.2 55.963 109 46 1 92 200 84 190 9.60e-28 110
Msa0464860 AT3G53460.2 45.455 88 48 0 201 288 94 181 3.31e-17 80.9
Msa0464860 AT3G53460.2 42.529 87 47 1 110 196 258 341 3.49e-15 75.1
Msa0464860 AT1G01080.1 35.233 193 117 4 94 279 93 284 2.22e-28 110
Msa0464860 AT3G53460.4 61.176 85 33 0 207 291 279 363 2.93e-28 112
Msa0464860 AT3G53460.4 46.923 130 46 2 92 200 84 211 3.96e-23 97.8
Msa0464860 AT3G53460.4 42.529 87 47 1 110 196 279 362 4.14e-15 75.1
Msa0464860 AT3G53460.4 36.697 109 48 1 201 288 94 202 1.80e-13 70.5
Msa0464860 AT1G01080.2 35.052 194 117 5 94 279 93 285 1.65e-27 108
Msa0464860 AT1G01080.3 34.426 183 112 4 94 269 93 274 6.33e-26 103
Msa0464860 AT3G16380.1 31.208 298 159 12 25 288 103 388 1.85e-22 97.4
Msa0464860 AT2G21660.2 50.649 77 38 0 207 283 9 85 2.07e-22 91.7
Msa0464860 AT2G21660.2 42.308 78 45 0 108 185 7 84 8.23e-13 65.5
Msa0464860 AT3G23830.2 51.899 79 38 0 207 285 36 114 2.09e-22 90.9
Msa0464860 AT3G23830.2 40.476 84 50 0 109 192 35 118 2.05e-13 66.6
Msa0464860 AT3G23830.1 51.899 79 38 0 207 285 36 114 2.09e-22 90.9
Msa0464860 AT3G23830.1 40.476 84 50 0 109 192 35 118 2.05e-13 66.6
Msa0464860 AT2G21660.1 50.649 77 38 0 207 283 9 85 3.16e-22 91.7
Msa0464860 AT2G21660.1 42.308 78 45 0 108 185 7 84 1.15e-12 65.5
Msa0464860 AT4G13850.4 50.000 80 40 0 207 286 36 115 3.31e-22 90.1
Msa0464860 AT4G13850.3 50.000 80 40 0 207 286 36 115 4.44e-22 90.1
Msa0464860 AT4G13850.3 38.095 84 52 0 110 193 36 119 8.12e-11 59.7
Msa0464860 AT4G13850.2 50.000 80 40 0 207 286 36 115 5.60e-22 90.1
Msa0464860 AT4G13850.2 38.095 84 52 0 110 193 36 119 9.71e-11 59.7
Msa0464860 AT4G13850.1 50.000 80 40 0 207 286 36 115 6.36e-22 90.1
Msa0464860 AT4G39260.3 45.238 84 46 0 207 290 7 90 6.13e-21 85.5
Msa0464860 AT4G39260.3 38.554 83 51 0 108 190 5 87 4.05e-13 64.3
Msa0464860 AT4G39260.2 46.753 77 41 0 207 283 7 83 5.76e-20 84.0
Msa0464860 AT4G39260.2 37.975 79 49 0 108 186 5 83 4.07e-11 60.1
Msa0464860 AT5G19350.1 31.111 180 118 2 111 289 26 200 6.04e-20 89.7
Msa0464860 AT5G19350.2 31.111 180 118 2 111 289 26 200 6.20e-20 89.4
Msa0464860 AT4G39260.1 46.753 77 41 0 207 283 7 83 1.69e-19 84.0
Msa0464860 AT4G39260.1 37.975 79 49 0 108 186 5 83 9.64e-11 60.1
Msa0464860 AT2G18510.1 30.978 184 116 2 107 289 23 196 2.92e-19 87.0
Msa0464860 AT5G61030.2 45.570 79 43 0 207 285 41 119 4.18e-19 85.9
Msa0464860 AT5G61030.2 41.250 80 47 0 109 188 40 119 2.71e-12 66.6
Msa0464860 AT5G61030.1 45.570 79 43 0 207 285 41 119 4.18e-19 85.9
Msa0464860 AT5G61030.1 41.250 80 47 0 109 188 40 119 2.71e-12 66.6
Msa0464860 AT5G54900.1 32.402 179 111 4 111 285 62 234 9.70e-19 85.9
Msa0464860 AT1G22760.1 30.570 193 119 4 106 288 226 413 1.01e-18 86.7
Msa0464860 AT1G17640.2 29.444 180 119 3 109 288 66 237 2.49e-18 84.3
Msa0464860 AT1G17640.1 29.444 180 119 3 109 288 66 237 2.49e-18 84.3
Msa0464860 AT1G17640.3 29.444 180 119 3 109 288 66 237 2.49e-18 84.3
Msa0464860 AT3G19130.1 33.155 187 103 6 111 288 110 283 2.80e-18 84.7
Msa0464860 AT4G09040.1 29.310 174 120 3 108 280 93 264 4.77e-18 82.8
Msa0464860 AT4G09040.2 29.310 174 120 3 108 280 33 204 4.88e-18 81.6
Msa0464860 AT3G08000.1 43.373 83 47 0 207 289 42 124 5.77e-18 79.3
Msa0464860 AT1G34140.1 32.609 184 112 4 111 285 121 301 7.86e-18 83.2
Msa0464860 AT1G71770.1 31.034 203 127 6 94 288 226 423 1.55e-17 83.2
Msa0464860 AT1G71770.1 28.177 181 125 3 108 288 145 320 7.34e-14 72.0
Msa0464860 AT1G71770.2 31.034 203 127 6 94 288 226 423 1.55e-17 83.2
Msa0464860 AT1G71770.2 28.177 181 125 3 108 288 145 320 7.34e-14 72.0
Msa0464860 AT3G14100.1 31.285 179 111 3 104 282 54 220 2.03e-17 82.4
Msa0464860 AT3G26420.1 43.210 81 46 0 203 283 4 84 2.52e-17 79.7
Msa0464860 AT5G40490.1 27.429 175 118 2 109 283 42 207 2.58e-17 82.0
Msa0464860 AT2G36660.1 28.283 198 132 4 99 288 190 385 3.14e-17 82.0
Msa0464860 AT2G36660.1 26.667 180 119 4 111 288 114 282 3.12e-11 64.3
Msa0464860 AT1G11650.1 30.168 179 114 3 111 285 64 235 4.31e-17 80.1
Msa0464860 AT1G49600.3 31.492 181 114 4 111 288 121 294 5.21e-17 81.3
Msa0464860 AT1G49600.2 31.492 181 114 4 111 288 121 294 5.21e-17 81.3
Msa0464860 AT5G55550.2 29.508 183 117 4 109 282 6 185 5.47e-17 81.3
Msa0464860 AT5G55550.3 29.508 183 117 4 109 282 6 185 5.47e-17 81.3
Msa0464860 AT5G55550.6 29.508 183 117 4 109 282 6 185 5.47e-17 81.3
Msa0464860 AT5G55550.11 29.508 183 117 4 109 282 6 185 5.47e-17 81.3
Msa0464860 AT4G26650.1 29.032 186 117 4 109 282 15 197 6.89e-17 80.9
Msa0464860 AT4G26650.2 29.032 186 117 4 109 282 12 194 6.89e-17 80.9
Msa0464860 AT5G55550.5 29.508 183 117 4 109 282 6 185 7.34e-17 80.9
Msa0464860 AT5G55550.4 29.508 183 117 4 109 282 6 185 7.34e-17 80.9
Msa0464860 AT5G55550.9 29.508 183 117 4 109 282 6 185 7.34e-17 80.9
Msa0464860 AT5G55550.7 29.508 183 117 4 109 282 6 185 7.34e-17 80.9
Msa0464860 AT5G55550.1 29.508 183 117 4 109 282 6 185 7.34e-17 80.9
Msa0464860 AT3G13224.1 26.752 157 108 2 109 265 19 168 7.82e-17 78.2
Msa0464860 AT1G47500.2 30.412 194 113 4 107 289 101 283 1.04e-16 79.3
Msa0464860 AT1G11650.2 30.168 179 114 3 111 285 64 235 1.28e-16 79.7
Msa0464860 AT1G11650.2 27.869 183 109 5 111 280 157 329 3.79e-11 63.5
Msa0464860 AT1G49600.1 31.492 181 114 4 111 288 121 294 1.34e-16 80.1
Msa0464860 AT3G07810.1 32.278 158 98 2 107 257 4 159 1.44e-16 80.1
Msa0464860 AT3G07810.2 32.278 158 98 2 107 257 4 159 1.48e-16 80.1
Msa0464860 AT1G74230.1 48.684 76 38 1 207 282 35 109 1.78e-16 78.2
Msa0464860 AT2G23350.1 30.233 172 110 2 109 280 46 207 2.03e-16 79.7
Msa0464860 AT2G23350.1 29.101 189 117 5 111 288 227 409 2.93e-14 73.2
Msa0464860 AT2G23350.1 28.889 180 121 4 109 288 134 306 2.16e-13 70.9
Msa0464860 AT4G34110.1 30.286 175 100 4 111 279 38 196 2.59e-16 79.3
Msa0464860 AT4G34110.1 27.419 186 124 4 111 288 217 399 1.01e-14 74.7
Msa0464860 AT4G36960.1 30.811 185 113 4 108 288 2 175 2.67e-16 78.6
Msa0464860 AT4G36960.2 30.811 185 113 4 108 288 2 175 2.67e-16 78.6
Msa0464860 AT1G47500.1 30.412 194 113 4 107 289 101 283 3.55e-16 78.6
Msa0464860 AT1G47500.1 27.749 191 118 5 111 287 201 385 2.86e-11 63.9
Msa0464860 AT3G13224.3 25.140 179 125 3 110 288 11 180 3.81e-16 78.2
Msa0464860 AT4G27000.1 29.775 178 116 4 111 285 82 253 3.94e-16 78.6
Msa0464860 AT1G17370.1 29.609 179 114 2 104 282 49 215 4.52e-16 78.2
Msa0464860 AT1G17370.2 29.609 179 114 2 104 282 49 215 4.69e-16 78.2
Msa0464860 AT1G17370.2 27.461 193 114 3 110 280 140 328 1.62e-11 64.7
Msa0464860 AT1G47490.2 30.102 196 111 5 107 289 99 281 9.63e-16 76.6
Msa0464860 AT3G13224.2 25.000 180 126 3 109 288 19 189 1.03e-15 77.0
Msa0464860 AT1G54080.1 29.050 179 115 3 104 282 58 224 2.32e-15 76.3
Msa0464860 AT1G54080.1 28.061 196 112 4 110 280 149 340 4.00e-11 63.5
Msa0464860 AT4G14300.1 28.649 185 120 3 107 282 4 185 3.09e-15 75.9
Msa0464860 AT4G14300.2 28.649 185 120 3 107 282 4 185 3.09e-15 75.9
Msa0464860 AT1G47490.1 30.102 196 111 5 107 289 99 281 3.30e-15 75.9
Msa0464860 AT1G47490.1 27.749 191 118 4 111 287 199 383 2.39e-12 67.4
Msa0464860 AT4G39260.4 46.774 62 33 0 207 268 7 68 3.89e-15 70.5
Msa0464860 AT4G13860.1 50.667 75 35 1 207 281 4 76 4.64e-15 69.7
Msa0464860 AT5G47620.1 28.804 184 117 4 107 282 4 181 8.64e-15 74.7
Msa0464860 AT5G47620.2 28.804 184 117 4 107 282 4 181 8.64e-15 74.7
Msa0464860 AT5G47620.5 28.804 184 117 4 107 282 4 181 8.64e-15 74.7
Msa0464860 AT5G40490.2 27.097 155 104 2 129 283 45 190 1.00e-14 74.3
Msa0464860 AT3G15010.1 31.765 170 107 5 108 273 74 238 1.33e-14 73.9
Msa0464860 AT3G15010.2 31.765 170 107 5 108 273 74 238 1.33e-14 73.9
Msa0464860 AT1G60650.2 41.558 77 45 0 207 283 13 89 3.09e-14 72.0
Msa0464860 AT1G60650.2 32.099 81 55 0 108 188 11 91 9.01e-11 62.0
Msa0464860 AT1G60650.1 41.558 77 45 0 207 283 13 89 3.09e-14 72.0
Msa0464860 AT1G60650.1 32.099 81 55 0 108 188 11 91 9.01e-11 62.0
Msa0464860 AT5G47320.1 43.750 80 45 0 207 286 32 111 3.41e-14 70.5
Msa0464860 AT1G54080.2 28.962 183 114 4 104 282 58 228 5.12e-14 72.4
Msa0464860 AT5G06210.1 37.805 82 51 0 109 190 34 115 5.29e-14 68.6
Msa0464860 AT5G06210.1 38.554 83 51 0 207 289 35 117 1.82e-13 67.0
Msa0464860 AT1G49760.1 29.412 170 108 3 111 279 47 205 9.99e-14 71.6
Msa0464860 AT1G49760.1 29.843 191 116 5 111 288 226 411 5.06e-13 69.7
Msa0464860 AT1G49760.2 29.412 170 108 3 111 279 47 205 9.99e-14 71.6
Msa0464860 AT1G49760.2 29.843 191 116 5 111 288 226 411 5.06e-13 69.7
Msa0464860 AT2G33410.1 29.947 187 115 5 107 282 4 185 2.53e-13 70.1
Msa0464860 AT5G04280.1 41.558 77 45 0 207 283 8 84 1.44e-12 67.4
Msa0464860 AT1G18630.1 44.156 77 43 0 207 283 37 113 1.62e-12 64.7
Msa0464860 AT2G21690.1 37.349 83 49 1 209 288 10 92 2.61e-12 63.2
Msa0464860 AT5G51300.1 41.333 75 44 0 208 282 482 556 3.33e-12 67.4
Msa0464860 AT5G51300.1 31.852 135 83 3 57 182 419 553 1.32e-11 65.5
Msa0464860 AT5G51300.2 41.333 75 44 0 208 282 482 556 3.33e-12 67.4
Msa0464860 AT5G51300.2 31.852 135 83 3 57 182 419 553 1.32e-11 65.5
Msa0464860 AT5G51300.3 41.333 75 44 0 208 282 482 556 3.33e-12 67.4
Msa0464860 AT5G51300.3 31.852 135 83 3 57 182 419 553 1.32e-11 65.5
Msa0464860 AT3G46020.1 37.179 78 49 0 207 284 8 85 1.02e-11 60.8
Msa0464860 AT5G59865.1 35.366 82 51 1 207 288 27 106 1.11e-11 61.2
Msa0464860 AT5G09880.1 27.041 196 134 5 93 284 154 344 1.17e-11 65.5
Msa0464860 AT1G71800.1 38.961 77 47 0 208 284 11 87 1.84e-11 64.7
Msa0464860 AT5G11412.1 52.000 50 24 0 207 256 53 102 2.43e-11 61.6
Msa0464860 AT3G18610.2 30.769 182 113 6 111 287 326 499 3.04e-11 64.3
Msa0464860 AT3G18610.3 30.769 182 113 6 111 287 356 529 3.20e-11 64.3
Msa0464860 AT5G19960.1 39.726 73 43 1 208 280 9 80 3.22e-11 63.5
Msa0464860 AT4G00830.4 28.415 183 120 6 110 288 197 372 3.37e-11 63.9
Msa0464860 AT4G13860.2 48.333 60 31 0 222 281 2 61 3.64e-11 58.5
Msa0464860 AT4G00830.2 28.415 183 120 6 110 288 197 372 4.20e-11 63.5
Msa0464860 AT4G00830.1 28.415 183 120 6 110 288 197 372 4.20e-11 63.5
Msa0464860 AT4G00830.6 28.415 183 120 6 110 288 197 372 4.20e-11 63.5
Msa0464860 AT3G18610.1 30.769 182 113 6 111 287 386 559 4.45e-11 63.5

Find 107 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGGACCGGAGTCGTGGTTT+TGG 0.257885 3_3:+65063280 Msa0464860:CDS
GAAGAAGGTGGGTTTGGATT+TGG 0.265654 3_3:-65062831 None:intergenic
TTACATAGGCGTTAAACTTC+TGG 0.269681 3_3:-65063345 None:intergenic
ACAAATAAATAACAGTAAAA+TGG 0.277176 3_3:-65064936 None:intergenic
TACTCAAAAGGAGCCGCGTC+TGG 0.295336 3_3:-65064799 None:intergenic
TGATGTTGATAGTGAGAAAT+TGG 0.320740 3_3:+65063105 Msa0464860:CDS
CTCAGCAATCTCAACGGTTC+CGG 0.324374 3_3:-65063146 None:intergenic
AAGGGAGAAGAAGGTGGGTT+TGG 0.325353 3_3:-65062837 None:intergenic
ACTGGTCGATCACGTGGATT+TGG 0.332826 3_3:+65064479 Msa0464860:CDS
GAGATGGAGATTGAGGGGTT+TGG 0.346796 3_3:-65062864 None:intergenic
GATTGAGGGGTTTGGAGGGA+AGG 0.360326 3_3:-65062856 None:intergenic
GGCAGGAATCGGCCATGGTT+AGG 0.362198 3_3:-65062787 None:intergenic
TAATACTCAAGAAAATTTAA+TGG 0.382724 3_3:-65065086 None:intergenic
AGTTTCAGCGGCGTCGGCAG+TGG 0.389734 3_3:-65062993 None:intergenic
ATGGAGATTGAGGGGTTTGG+AGG 0.396602 3_3:-65062861 None:intergenic
GAGGAAGCAAAATTATTTGT+TGG 0.402885 3_3:+65063070 Msa0464860:CDS
GATGCCATTGCCGCTCTTGA+TGG 0.408798 3_3:+65064536 Msa0464860:CDS
TGATGGAGAGATGGAGATTG+AGG 0.421108 3_3:-65062871 None:intergenic
GCAGGAATCGGCCATGGTTA+GGG 0.422585 3_3:-65062786 None:intergenic
GGAGTAGCCGGTTTCATGCT+AGG 0.428274 3_3:+65064908 Msa0464860:three_prime_UTR
ATAACTCTAGCAGTTGATAT+AGG 0.441480 3_3:-65064838 None:intergenic
TTTGGAGGGAAGGGAGAAGA+AGG 0.441974 3_3:-65062846 None:intergenic
TGGTGATAGAAGGGTTTAGA+AGG 0.443131 3_3:-65062706 None:intergenic
GAGGGAAGGGAGAAGAAGGT+GGG 0.447073 3_3:-65062842 None:intergenic
ATTGAGGGGTTTGGAGGGAA+GGG 0.448793 3_3:-65062855 None:intergenic
GGAGGGAAGGGAGAAGAAGG+TGG 0.449920 3_3:-65062843 None:intergenic
CGCTCGGGTCGAGATCCTTT+AGG 0.452976 3_3:-65064311 None:intergenic
GAAGAGGGATGAGAGGAGGC+AGG 0.455657 3_3:-65062804 None:intergenic
GCCGCGTCTGGGCCTGTCTT+CGG 0.457397 3_3:-65064787 None:intergenic
TGGAGATTGAGGGGTTTGGA+GGG 0.458466 3_3:-65062860 None:intergenic
CATTGCCGCTCTTGATGGTC+AGG 0.460084 3_3:+65064541 Msa0464860:CDS
GGATTTGAAGAGGGGAGTGG+TGG 0.461394 3_3:-65062765 None:intergenic
GATAGACATGGTGGTGGTGG+TGG 0.462517 3_3:-65062738 None:intergenic
TGGTGGTGGTGGTGATAGAA+GGG 0.463434 3_3:-65062715 None:intergenic
ATCATTCATTTCAGTTTCAT+CGG 0.463677 3_3:-65064516 None:intergenic
TTTGGATTTGGAGTGGAAGA+GGG 0.465991 3_3:-65062819 None:intergenic
TTCTCACTATCAACATCAAA+AGG 0.466331 3_3:-65063100 None:intergenic
GTTTCAGCGGCGTCGGCAGT+GGG 0.467592 3_3:-65062992 None:intergenic
GTTTGGATTTGGAGTGGAAG+AGG 0.471089 3_3:-65062820 None:intergenic
GGATAAACCTAGCATGAAAC+CGG 0.474197 3_3:-65064915 None:intergenic
GAGTGAGCGTTGCCGAAGAC+AGG 0.476254 3_3:+65064775 Msa0464860:CDS
GGATGAGAGGAGGCAGGAAT+CGG 0.476652 3_3:-65062798 None:intergenic
AGCTGGATTGAGTCTCGATT+GGG 0.477060 3_3:+65062967 Msa0464860:CDS
GAAGGGTTTAGAAGGAATGA+AGG 0.478258 3_3:-65062698 None:intergenic
GATGGAGAGATGGAGATTGA+GGG 0.487203 3_3:-65062870 None:intergenic
AGTGATAGACATGGTGGTGG+TGG 0.488880 3_3:-65062741 None:intergenic
AGGTGCACGCTCAGTACGCT+CGG 0.489901 3_3:-65064327 None:intergenic
TGGAGTGGAAGAGGGATGAG+AGG 0.490997 3_3:-65062811 None:intergenic
GTTAACAAGGCTTCTCCTAA+AGG 0.492516 3_3:+65064296 Msa0464860:CDS
TTTATGTTGGTAACTTGCCA+TGG 0.495693 3_3:+65064375 Msa0464860:CDS
TAGGGATTTGAAGAGGGGAG+TGG 0.499159 3_3:-65062768 None:intergenic
AAGCTGGATTGAGTCTCGAT+TGG 0.501735 3_3:+65062966 Msa0464860:CDS
CATTGCAGAGTTTGGAGGGT+AGG 0.503587 3_3:+65064745 Msa0464860:intron
AGAAGGAATGAAGGTAGAGA+AGG 0.506906 3_3:-65062689 None:intergenic
CCCTTGTTCGTTGCTCAAGA+AGG 0.508002 3_3:+65062914 Msa0464860:CDS
CATGGGAAGTTGATAATAGT+AGG 0.509813 3_3:+65064393 Msa0464860:CDS
CCAACATAAATTCTTATGAC+AGG 0.511751 3_3:-65064362 None:intergenic
CTTTCATTGCAGAGTTTGGA+GGG 0.518996 3_3:+65064741 Msa0464860:intron
CATGGTTAGGGATTTGAAGA+GGG 0.528817 3_3:-65062774 None:intergenic
ACTCAAAAGGAGCCGCGTCT+GGG 0.529406 3_3:-65064798 None:intergenic
CTGACCATCAAGAGCGGCAA+TGG 0.534062 3_3:-65064540 None:intergenic
GGTTTCAGTTTCAGCGGCGT+CGG 0.536606 3_3:-65062999 None:intergenic
GCTTTCATTGCAGAGTTTGG+AGG 0.537218 3_3:+65064740 Msa0464860:intron
GGTTATTTATAACAGAGAAA+CGG 0.537755 3_3:+65063261 Msa0464860:intron
CAAGGGAGAGAAAGAGCGGT+TGG 0.540997 3_3:-65062897 None:intergenic
AAGATCGTTGGCTGTTAACA+AGG 0.543599 3_3:+65064283 Msa0464860:CDS
AGGTGGGTTTGGATTTGGAG+TGG 0.548878 3_3:-65062826 None:intergenic
GTAGTCTATGATAGAGAGAC+TGG 0.551457 3_3:+65064461 Msa0464860:CDS
ATGGAGAGATGGAGATTGAG+GGG 0.552843 3_3:-65062869 None:intergenic
GCAGAGGTGGAGAGTAGGCA+TGG 0.553538 3_3:+65065028 Msa0464860:three_prime_UTR
GCCGCTGAAACTGAAACCGC+TGG 0.556988 3_3:+65063004 Msa0464860:CDS
AGACTGCAGAGGTGGAGAGT+AGG 0.558940 3_3:+65065023 Msa0464860:three_prime_UTR
GGACTACGATGGAAGATCGT+TGG 0.560144 3_3:+65064271 Msa0464860:intron
GCCTTCTTGAGCAACGAACA+AGG 0.561779 3_3:-65062915 None:intergenic
TACTTGACGAGCTACTCAAA+AGG 0.564061 3_3:-65064811 None:intergenic
ACTTCTCTAGACGAAGAAGC+TGG 0.568501 3_3:+65062950 Msa0464860:CDS
AGCTTCTTCGTCTAGAGAAG+TGG 0.569747 3_3:-65062948 None:intergenic
AGTAGACTCGGCTTCTTCAA+CGG 0.573325 3_3:-65063320 None:intergenic
TTATGTTGGTAACTTGCCAT+GGG 0.577556 3_3:+65064376 Msa0464860:CDS
AGAGAAACGGACCGGAGTCG+TGG 0.578383 3_3:+65063274 Msa0464860:CDS
AGTGGAAGAGGGATGAGAGG+AGG 0.581707 3_3:-65062808 None:intergenic
CCATGGTTAGGGATTTGAAG+AGG 0.582325 3_3:-65062775 None:intergenic
TGCTAGAAGTCTATAAAACT+CGG 0.590668 3_3:+65065062 Msa0464860:three_prime_UTR
GGAAGTGATAGACATGGTGG+TGG 0.592643 3_3:-65062744 None:intergenic
AGAGAGACTGGTCGATCACG+TGG 0.593334 3_3:+65064473 Msa0464860:CDS
CTACTATTATCAACTTCCCA+TGG 0.597561 3_3:-65064392 None:intergenic
GAGGAGGCAGGAATCGGCCA+TGG 0.598795 3_3:-65062792 None:intergenic
AAACTTCTGGACAGTAGACT+CGG 0.599828 3_3:-65063332 None:intergenic
TTTATAACAGAGAAACGGAC+CGG 0.600332 3_3:+65063266 Msa0464860:CDS
CCTGTCATAAGAATTTATGT+TGG 0.603593 3_3:+65064362 Msa0464860:CDS
GGTGCACGCTCAGTACGCTC+GGG 0.609107 3_3:-65064326 None:intergenic
GCCGAAGACAGGCCCAGACG+CGG 0.612716 3_3:+65064786 Msa0464860:CDS
ACCAGCGGTTTCAGTTTCAG+CGG 0.623350 3_3:-65063005 None:intergenic
CAAATCCAAAACCACGACTC+CGG 0.626160 3_3:-65063285 None:intergenic
CAGAGGTGGAGAGTAGGCAT+GGG 0.630670 3_3:+65065029 Msa0464860:three_prime_UTR
TTCAGCAGAATCATCACCAG+CGG 0.638086 3_3:-65063020 None:intergenic
ATGGTTAGGGATTTGAAGAG+GGG 0.642863 3_3:-65062773 None:intergenic
CCTTCTTGAGCAACGAACAA+GGG 0.648260 3_3:-65062914 None:intergenic
TGTTACCTCAGCAATCTCAA+CGG 0.671010 3_3:-65063152 None:intergenic
CCTCTTCAAATCCCTAACCA+TGG 0.678784 3_3:+65062775 Msa0464860:CDS
TTCATGTGACAGGACTACGA+TGG 0.686918 3_3:+65064260 Msa0464860:intron
GGTGGAAGTGATAGACATGG+TGG 0.687740 3_3:-65062747 None:intergenic
CGAACAAGGGAGAGAAAGAG+CGG 0.688910 3_3:-65062901 None:intergenic
CGGAACCGTTGAGATTGCTG+AGG 0.697900 3_3:+65063147 Msa0464860:CDS
AGTGGTGGAAGTGATAGACA+TGG 0.705544 3_3:-65062750 None:intergenic
TTATACCTGACCATCAAGAG+CGG 0.726743 3_3:-65064546 None:intergenic
ATGACAGGTTCAAAACTGCG+AGG 0.748725 3_3:-65064347 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTTGAGAAAATTGAA+TGG + chr3_3:65063650-65063669 Msa0464860:intron 15.0%
!! AATATTACAATTTAGTCATA+CGG - chr3_3:65064002-65064021 None:intergenic 15.0%
!!! TGTTAGATTTCTTATTTATA+TGG + chr3_3:65064063-65064082 Msa0464860:intron 15.0%
!! ACAAATAAATAACAGTAAAA+TGG - chr3_3:65064939-65064958 None:intergenic 15.0%
!! AATAATTTGAGAAAATTGAA+TGG + chr3_3:65063650-65063669 Msa0464860:intron 15.0%
!! AATATTACAATTTAGTCATA+CGG - chr3_3:65064002-65064021 None:intergenic 15.0%
!!! TGTTAGATTTCTTATTTATA+TGG + chr3_3:65064063-65064082 Msa0464860:intron 15.0%
!! ACAAATAAATAACAGTAAAA+TGG - chr3_3:65064939-65064958 None:intergenic 15.0%
!!! TGCTATTTGAGTTTATTTTT+TGG + chr3_3:65063197-65063216 Msa0464860:intron 20.0%
!!! ATTGTTGTTATTGTTGTTTT+AGG + chr3_3:65063240-65063259 Msa0464860:intron 20.0%
!! AATTTCATTTGAACTTACAT+AGG - chr3_3:65063362-65063381 None:intergenic 20.0%
!! TAACACATTCTAAATTATAG+TGG + chr3_3:65063399-65063418 Msa0464860:intron 20.0%
!! CATAATCAATGTAAACTATA+AGG + chr3_3:65063465-65063484 Msa0464860:intron 20.0%
!!! AAAAAAATGGCATTGTTTTA+AGG - chr3_3:65064041-65064060 None:intergenic 20.0%
!! GAAATCTAACAAGAAAAAAA+TGG - chr3_3:65064054-65064073 None:intergenic 20.0%
!!! TTTTTTTTGTTGTGTTTTCT+TGG + chr3_3:65064225-65064244 Msa0464860:intron 20.0%
!!! TATTTGTGTTTTAATAGTTG+AGG + chr3_3:65064858-65064877 Msa0464860:three_prime_UTR 20.0%
!!! ACTCTTATATAATTTTCTTC+TGG + chr3_3:65064887-65064906 Msa0464860:three_prime_UTR 20.0%
!!! TGCTATTTGAGTTTATTTTT+TGG + chr3_3:65063197-65063216 Msa0464860:intron 20.0%
!!! ATTGTTGTTATTGTTGTTTT+AGG + chr3_3:65063240-65063259 Msa0464860:intron 20.0%
!! AATTTCATTTGAACTTACAT+AGG - chr3_3:65063362-65063381 None:intergenic 20.0%
!! TAACACATTCTAAATTATAG+TGG + chr3_3:65063399-65063418 Msa0464860:intron 20.0%
!! CATAATCAATGTAAACTATA+AGG + chr3_3:65063465-65063484 Msa0464860:intron 20.0%
!!! AAAAAAATGGCATTGTTTTA+AGG - chr3_3:65064041-65064060 None:intergenic 20.0%
!! GAAATCTAACAAGAAAAAAA+TGG - chr3_3:65064054-65064073 None:intergenic 20.0%
!!! TTTTTTTTGTTGTGTTTTCT+TGG + chr3_3:65064225-65064244 Msa0464860:intron 20.0%
!!! TATTTGTGTTTTAATAGTTG+AGG + chr3_3:65064858-65064877 Msa0464860:three_prime_UTR 20.0%
!!! ACTCTTATATAATTTTCTTC+TGG + chr3_3:65064887-65064906 Msa0464860:three_prime_UTR 20.0%
! GGTTATTTATAACAGAGAAA+CGG + chr3_3:65063261-65063280 Msa0464860:intron 25.0%
! TATTAGTAGTTTCAATGTGT+CGG - chr3_3:65063634-65063653 None:intergenic 25.0%
! CTTTACTCTTGAATGAAATA+TGG + chr3_3:65063732-65063751 Msa0464860:intron 25.0%
!!! ATTCATTTTTCTTGCTTTCT+TGG + chr3_3:65063798-65063817 Msa0464860:intron 25.0%
!! CCTCATATAATTTTCCAAAT+CGG - chr3_3:65063905-65063924 None:intergenic 25.0%
! ATTTGGAAAATTATATGAGG+TGG + chr3_3:65063905-65063924 Msa0464860:intron 25.0%
! AAAATTATATGAGGTGGTTT+AGG + chr3_3:65063911-65063930 Msa0464860:intron 25.0%
! ATCATTCATTTCAGTTTCAT+CGG - chr3_3:65064519-65064538 None:intergenic 25.0%
!! TGAAGGGAATATGATTTTTA+TGG + chr3_3:65064631-65064650 Msa0464860:intron 25.0%
!! GAAGGGAATATGATTTTTAT+GGG + chr3_3:65064632-65064651 Msa0464860:intron 25.0%
! GGTTATTTATAACAGAGAAA+CGG + chr3_3:65063261-65063280 Msa0464860:intron 25.0%
! TATTAGTAGTTTCAATGTGT+CGG - chr3_3:65063634-65063653 None:intergenic 25.0%
! CTTTACTCTTGAATGAAATA+TGG + chr3_3:65063732-65063751 Msa0464860:intron 25.0%
!!! ATTCATTTTTCTTGCTTTCT+TGG + chr3_3:65063798-65063817 Msa0464860:intron 25.0%
!! CCTCATATAATTTTCCAAAT+CGG - chr3_3:65063905-65063924 None:intergenic 25.0%
! ATTTGGAAAATTATATGAGG+TGG + chr3_3:65063905-65063924 Msa0464860:intron 25.0%
! AAAATTATATGAGGTGGTTT+AGG + chr3_3:65063911-65063930 Msa0464860:intron 25.0%
! ATCATTCATTTCAGTTTCAT+CGG - chr3_3:65064519-65064538 None:intergenic 25.0%
!! TGAAGGGAATATGATTTTTA+TGG + chr3_3:65064631-65064650 Msa0464860:intron 25.0%
!! GAAGGGAATATGATTTTTAT+GGG + chr3_3:65064632-65064651 Msa0464860:intron 25.0%
! ACAAATAATTTTGCTTCCTC+AGG - chr3_3:65063070-65063089 None:intergenic 30.0%
GAGGAAGCAAAATTATTTGT+TGG + chr3_3:65063070-65063089 Msa0464860:CDS 30.0%
TTCTCACTATCAACATCAAA+AGG - chr3_3:65063103-65063122 None:intergenic 30.0%
!! TGATGTTGATAGTGAGAAAT+TGG + chr3_3:65063105-65063124 Msa0464860:CDS 30.0%
AATGTCGATATTTCAAGCTA+TGG + chr3_3:65063423-65063442 Msa0464860:intron 30.0%
! GTGACAACCATTTTGAATTT+TGG + chr3_3:65063682-65063701 Msa0464860:intron 30.0%
AAAGAACTCAAGATAGGATT+AGG - chr3_3:65063716-65063735 None:intergenic 30.0%
AAGAGTAAAGAACTCAAGAT+AGG - chr3_3:65063722-65063741 None:intergenic 30.0%
TTTCCATCTTGAACAAATAG+AGG + chr3_3:65063758-65063777 Msa0464860:intron 30.0%
TTTCCTCTATTTGTTCAAGA+TGG - chr3_3:65063764-65063783 None:intergenic 30.0%
!! AGACACATAAGAAGTATTAC+AGG - chr3_3:65063825-65063844 None:intergenic 30.0%
! TATATAGTATGCGTTCTAAG+GGG - chr3_3:65063872-65063891 None:intergenic 30.0%
CTATATAGTATGCGTTCTAA+GGG - chr3_3:65063873-65063892 None:intergenic 30.0%
ACTATATAGTATGCGTTCTA+AGG - chr3_3:65063874-65063893 None:intergenic 30.0%
!! CCGATTTGGAAAATTATATG+AGG + chr3_3:65063902-65063921 Msa0464860:intron 30.0%
TACAATTTAGTCATACGGAT+TGG - chr3_3:65063997-65064016 None:intergenic 30.0%
! ACATGTTTTACTGTTGTCAT+TGG + chr3_3:65064185-65064204 Msa0464860:intron 30.0%
CCAACATAAATTCTTATGAC+AGG - chr3_3:65064365-65064384 None:intergenic 30.0%
CCTGTCATAAGAATTTATGT+TGG + chr3_3:65064362-65064381 Msa0464860:CDS 30.0%
!!! AGTTTTTAGTGAACATGGTA+AGG + chr3_3:65064424-65064443 Msa0464860:CDS 30.0%
GTACTTTGCTAAATTATCAG+TGG + chr3_3:65064575-65064594 Msa0464860:intron 30.0%
!! GCATTGATAATGACATGTTA+TGG + chr3_3:65064604-65064623 Msa0464860:intron 30.0%
TGACATGTTATGGAAATTGA+AGG + chr3_3:65064614-65064633 Msa0464860:intron 30.0%
GACATGTTATGGAAATTGAA+GGG + chr3_3:65064615-65064634 Msa0464860:intron 30.0%
! ATAACTCTAGCAGTTGATAT+AGG - chr3_3:65064841-65064860 None:intergenic 30.0%
! TTTTATAGACTTCTAGCAAG+AGG - chr3_3:65065060-65065079 None:intergenic 30.0%
TGCTAGAAGTCTATAAAACT+CGG + chr3_3:65065062-65065081 Msa0464860:three_prime_UTR 30.0%
! ACAAATAATTTTGCTTCCTC+AGG - chr3_3:65063070-65063089 None:intergenic 30.0%
GAGGAAGCAAAATTATTTGT+TGG + chr3_3:65063070-65063089 Msa0464860:CDS 30.0%
TTCTCACTATCAACATCAAA+AGG - chr3_3:65063103-65063122 None:intergenic 30.0%
!! TGATGTTGATAGTGAGAAAT+TGG + chr3_3:65063105-65063124 Msa0464860:CDS 30.0%
AATGTCGATATTTCAAGCTA+TGG + chr3_3:65063423-65063442 Msa0464860:intron 30.0%
! GTGACAACCATTTTGAATTT+TGG + chr3_3:65063682-65063701 Msa0464860:intron 30.0%
AAAGAACTCAAGATAGGATT+AGG - chr3_3:65063716-65063735 None:intergenic 30.0%
AAGAGTAAAGAACTCAAGAT+AGG - chr3_3:65063722-65063741 None:intergenic 30.0%
TTTCCATCTTGAACAAATAG+AGG + chr3_3:65063758-65063777 Msa0464860:intron 30.0%
TTTCCTCTATTTGTTCAAGA+TGG - chr3_3:65063764-65063783 None:intergenic 30.0%
!! AGACACATAAGAAGTATTAC+AGG - chr3_3:65063825-65063844 None:intergenic 30.0%
! TATATAGTATGCGTTCTAAG+GGG - chr3_3:65063872-65063891 None:intergenic 30.0%
CTATATAGTATGCGTTCTAA+GGG - chr3_3:65063873-65063892 None:intergenic 30.0%
ACTATATAGTATGCGTTCTA+AGG - chr3_3:65063874-65063893 None:intergenic 30.0%
!! CCGATTTGGAAAATTATATG+AGG + chr3_3:65063902-65063921 Msa0464860:intron 30.0%
TACAATTTAGTCATACGGAT+TGG - chr3_3:65063997-65064016 None:intergenic 30.0%
! ACATGTTTTACTGTTGTCAT+TGG + chr3_3:65064185-65064204 Msa0464860:intron 30.0%
CCAACATAAATTCTTATGAC+AGG - chr3_3:65064365-65064384 None:intergenic 30.0%
CCTGTCATAAGAATTTATGT+TGG + chr3_3:65064362-65064381 Msa0464860:CDS 30.0%
!!! AGTTTTTAGTGAACATGGTA+AGG + chr3_3:65064424-65064443 Msa0464860:CDS 30.0%
GTACTTTGCTAAATTATCAG+TGG + chr3_3:65064575-65064594 Msa0464860:intron 30.0%
!! GCATTGATAATGACATGTTA+TGG + chr3_3:65064604-65064623 Msa0464860:intron 30.0%
TGACATGTTATGGAAATTGA+AGG + chr3_3:65064614-65064633 Msa0464860:intron 30.0%
GACATGTTATGGAAATTGAA+GGG + chr3_3:65064615-65064634 Msa0464860:intron 30.0%
! ATAACTCTAGCAGTTGATAT+AGG - chr3_3:65064841-65064860 None:intergenic 30.0%
! TTTTATAGACTTCTAGCAAG+AGG - chr3_3:65065060-65065079 None:intergenic 30.0%
TGCTAGAAGTCTATAAAACT+CGG + chr3_3:65065062-65065081 Msa0464860:three_prime_UTR 30.0%
! AATAATTTTGCTTCCTCAGG+TGG - chr3_3:65063067-65063086 None:intergenic 35.0%
TTTATAACAGAGAAACGGAC+CGG + chr3_3:65063266-65063285 Msa0464860:CDS 35.0%
TTACATAGGCGTTAAACTTC+TGG - chr3_3:65063348-65063367 None:intergenic 35.0%
AGATAAGATGCAATGAAAGC+TGG + chr3_3:65063508-65063527 Msa0464860:intron 35.0%
! CAACTTTTCAAAGTTTCAGC+AGG + chr3_3:65063554-65063573 Msa0464860:intron 35.0%
!! ACCATTTTGAATTTTGGTGC+TGG + chr3_3:65063688-65063707 Msa0464860:intron 35.0%
ACCAGCACCAAAATTCAAAA+TGG - chr3_3:65063692-65063711 None:intergenic 35.0%
TATAGTTGCAATCTCCGATT+TGG + chr3_3:65063888-65063907 Msa0464860:intron 35.0%
ACATACTTTGTATGAAGCAC+TGG - chr3_3:65063951-65063970 None:intergenic 35.0%
! TTGTTGTGTTTTCTTGGTTC+TGG + chr3_3:65064231-65064250 Msa0464860:intron 35.0%
!! TTTATGTTGGTAACTTGCCA+TGG + chr3_3:65064375-65064394 Msa0464860:CDS 35.0%
!! TTATGTTGGTAACTTGCCAT+GGG + chr3_3:65064376-65064395 Msa0464860:CDS 35.0%
CTACTATTATCAACTTCCCA+TGG - chr3_3:65064395-65064414 None:intergenic 35.0%
!! CATGGGAAGTTGATAATAGT+AGG + chr3_3:65064393-65064412 Msa0464860:CDS 35.0%
!!! GAGCAAGTTTTTAGTGAACA+TGG + chr3_3:65064419-65064438 Msa0464860:CDS 35.0%
!!! TAATTTTCTTCTGGAGTAGC+CGG + chr3_3:65064896-65064915 Msa0464860:three_prime_UTR 35.0%
! AATAATTTTGCTTCCTCAGG+TGG - chr3_3:65063067-65063086 None:intergenic 35.0%
TTTATAACAGAGAAACGGAC+CGG + chr3_3:65063266-65063285 Msa0464860:CDS 35.0%
TTACATAGGCGTTAAACTTC+TGG - chr3_3:65063348-65063367 None:intergenic 35.0%
AGATAAGATGCAATGAAAGC+TGG + chr3_3:65063508-65063527 Msa0464860:intron 35.0%
! CAACTTTTCAAAGTTTCAGC+AGG + chr3_3:65063554-65063573 Msa0464860:intron 35.0%
!! ACCATTTTGAATTTTGGTGC+TGG + chr3_3:65063688-65063707 Msa0464860:intron 35.0%
ACCAGCACCAAAATTCAAAA+TGG - chr3_3:65063692-65063711 None:intergenic 35.0%
TATAGTTGCAATCTCCGATT+TGG + chr3_3:65063888-65063907 Msa0464860:intron 35.0%
ACATACTTTGTATGAAGCAC+TGG - chr3_3:65063951-65063970 None:intergenic 35.0%
! TTGTTGTGTTTTCTTGGTTC+TGG + chr3_3:65064231-65064250 Msa0464860:intron 35.0%
!! TTTATGTTGGTAACTTGCCA+TGG + chr3_3:65064375-65064394 Msa0464860:CDS 35.0%
!! TTATGTTGGTAACTTGCCAT+GGG + chr3_3:65064376-65064395 Msa0464860:CDS 35.0%
CTACTATTATCAACTTCCCA+TGG - chr3_3:65064395-65064414 None:intergenic 35.0%
!! CATGGGAAGTTGATAATAGT+AGG + chr3_3:65064393-65064412 Msa0464860:CDS 35.0%
!!! GAGCAAGTTTTTAGTGAACA+TGG + chr3_3:65064419-65064438 Msa0464860:CDS 35.0%
!!! TAATTTTCTTCTGGAGTAGC+CGG + chr3_3:65064896-65064915 Msa0464860:three_prime_UTR 35.0%
GGTAGAGAAGGAGAAAAATG+AGG - chr3_3:65062680-65062699 None:intergenic 40.0%
AGAAGGAATGAAGGTAGAGA+AGG - chr3_3:65062692-65062711 None:intergenic 40.0%
GAAGGGTTTAGAAGGAATGA+AGG - chr3_3:65062701-65062720 None:intergenic 40.0%
TGGTGATAGAAGGGTTTAGA+AGG - chr3_3:65062709-65062728 None:intergenic 40.0%
ATGGTTAGGGATTTGAAGAG+GGG - chr3_3:65062776-65062795 None:intergenic 40.0%
CATGGTTAGGGATTTGAAGA+GGG - chr3_3:65062777-65062796 None:intergenic 40.0%
! TTTGGATTTGGAGTGGAAGA+GGG - chr3_3:65062822-65062841 None:intergenic 40.0%
! TGATTTTGTTGAACCACCTG+AGG + chr3_3:65063051-65063070 Msa0464860:CDS 40.0%
TGTTACCTCAGCAATCTCAA+CGG - chr3_3:65063155-65063174 None:intergenic 40.0%
AAACTTCTGGACAGTAGACT+CGG - chr3_3:65063335-65063354 None:intergenic 40.0%
GTCGATATTTCAAGCTATGG+TGG + chr3_3:65063426-65063445 Msa0464860:intron 40.0%
!! CATACGGATTGGAGTTTCAA+TGG - chr3_3:65063986-65064005 None:intergenic 40.0%
GTAGTCCTGTCACATGAAAA+TGG - chr3_3:65064258-65064277 None:intergenic 40.0%
! AAGATCGTTGGCTGTTAACA+AGG + chr3_3:65064283-65064302 Msa0464860:CDS 40.0%
GTTAACAAGGCTTCTCCTAA+AGG + chr3_3:65064296-65064315 Msa0464860:CDS 40.0%
GTAGTCTATGATAGAGAGAC+TGG + chr3_3:65064461-65064480 Msa0464860:CDS 40.0%
TTATACCTGACCATCAAGAG+CGG - chr3_3:65064549-65064568 None:intergenic 40.0%
! TTTTATGGGCTCGTGTTGAA+TGG + chr3_3:65064646-65064665 Msa0464860:intron 40.0%
TTTATGGGCTCGTGTTGAAT+GGG + chr3_3:65064647-65064666 Msa0464860:intron 40.0%
TGTGCTTTCATTGCAGAGTT+TGG + chr3_3:65064737-65064756 Msa0464860:intron 40.0%
CTTTCATTGCAGAGTTTGGA+GGG + chr3_3:65064741-65064760 Msa0464860:intron 40.0%
TACTTGACGAGCTACTCAAA+AGG - chr3_3:65064814-65064833 None:intergenic 40.0%
GGATAAACCTAGCATGAAAC+CGG - chr3_3:65064918-65064937 None:intergenic 40.0%
GAAAGAGAAAAAGACTGCAG+AGG + chr3_3:65065012-65065031 Msa0464860:three_prime_UTR 40.0%
GGTAGAGAAGGAGAAAAATG+AGG - chr3_3:65062680-65062699 None:intergenic 40.0%
AGAAGGAATGAAGGTAGAGA+AGG - chr3_3:65062692-65062711 None:intergenic 40.0%
GAAGGGTTTAGAAGGAATGA+AGG - chr3_3:65062701-65062720 None:intergenic 40.0%
TGGTGATAGAAGGGTTTAGA+AGG - chr3_3:65062709-65062728 None:intergenic 40.0%
ATGGTTAGGGATTTGAAGAG+GGG - chr3_3:65062776-65062795 None:intergenic 40.0%
CATGGTTAGGGATTTGAAGA+GGG - chr3_3:65062777-65062796 None:intergenic 40.0%
! TTTGGATTTGGAGTGGAAGA+GGG - chr3_3:65062822-65062841 None:intergenic 40.0%
! TGATTTTGTTGAACCACCTG+AGG + chr3_3:65063051-65063070 Msa0464860:CDS 40.0%
TGTTACCTCAGCAATCTCAA+CGG - chr3_3:65063155-65063174 None:intergenic 40.0%
AAACTTCTGGACAGTAGACT+CGG - chr3_3:65063335-65063354 None:intergenic 40.0%
GTCGATATTTCAAGCTATGG+TGG + chr3_3:65063426-65063445 Msa0464860:intron 40.0%
!! CATACGGATTGGAGTTTCAA+TGG - chr3_3:65063986-65064005 None:intergenic 40.0%
GTAGTCCTGTCACATGAAAA+TGG - chr3_3:65064258-65064277 None:intergenic 40.0%
! AAGATCGTTGGCTGTTAACA+AGG + chr3_3:65064283-65064302 Msa0464860:CDS 40.0%
GTTAACAAGGCTTCTCCTAA+AGG + chr3_3:65064296-65064315 Msa0464860:CDS 40.0%
GTAGTCTATGATAGAGAGAC+TGG + chr3_3:65064461-65064480 Msa0464860:CDS 40.0%
TTATACCTGACCATCAAGAG+CGG - chr3_3:65064549-65064568 None:intergenic 40.0%
! TTTTATGGGCTCGTGTTGAA+TGG + chr3_3:65064646-65064665 Msa0464860:intron 40.0%
TTTATGGGCTCGTGTTGAAT+GGG + chr3_3:65064647-65064666 Msa0464860:intron 40.0%
TGTGCTTTCATTGCAGAGTT+TGG + chr3_3:65064737-65064756 Msa0464860:intron 40.0%
CTTTCATTGCAGAGTTTGGA+GGG + chr3_3:65064741-65064760 Msa0464860:intron 40.0%
TACTTGACGAGCTACTCAAA+AGG - chr3_3:65064814-65064833 None:intergenic 40.0%
GGATAAACCTAGCATGAAAC+CGG - chr3_3:65064918-65064937 None:intergenic 40.0%
GAAAGAGAAAAAGACTGCAG+AGG + chr3_3:65065012-65065031 Msa0464860:three_prime_UTR 40.0%
! AGTGGTGGAAGTGATAGACA+TGG - chr3_3:65062753-65062772 None:intergenic 45.0%
CCATGGTTAGGGATTTGAAG+AGG - chr3_3:65062778-65062797 None:intergenic 45.0%
CCTCTTCAAATCCCTAACCA+TGG + chr3_3:65062775-65062794 Msa0464860:CDS 45.0%
! GTTTGGATTTGGAGTGGAAG+AGG - chr3_3:65062823-65062842 None:intergenic 45.0%
! GAAGAAGGTGGGTTTGGATT+TGG - chr3_3:65062834-65062853 None:intergenic 45.0%
ATGGAGAGATGGAGATTGAG+GGG - chr3_3:65062872-65062891 None:intergenic 45.0%
GATGGAGAGATGGAGATTGA+GGG - chr3_3:65062873-65062892 None:intergenic 45.0%
TGATGGAGAGATGGAGATTG+AGG - chr3_3:65062874-65062893 None:intergenic 45.0%
!!! GGTTGGTTTTGATGGAGAGA+TGG - chr3_3:65062883-65062902 None:intergenic 45.0%
!!! GAAAGAGCGGTTGGTTTTGA+TGG - chr3_3:65062891-65062910 None:intergenic 45.0%
CCTTCTTGAGCAACGAACAA+GGG - chr3_3:65062917-65062936 None:intergenic 45.0%
AGCTTCTTCGTCTAGAGAAG+TGG - chr3_3:65062951-65062970 None:intergenic 45.0%
ACTTCTCTAGACGAAGAAGC+TGG + chr3_3:65062950-65062969 Msa0464860:CDS 45.0%
AAGCTGGATTGAGTCTCGAT+TGG + chr3_3:65062966-65062985 Msa0464860:CDS 45.0%
AGCTGGATTGAGTCTCGATT+GGG + chr3_3:65062967-65062986 Msa0464860:CDS 45.0%
TTCAGCAGAATCATCACCAG+CGG - chr3_3:65063023-65063042 None:intergenic 45.0%
!! GCCATGCTTTTTGAACAAGC+CGG + chr3_3:65063127-65063146 Msa0464860:CDS 45.0%
! TCCGGCTTGTTCAAAAAGCA+TGG - chr3_3:65063131-65063150 None:intergenic 45.0%
CAAATCCAAAACCACGACTC+CGG - chr3_3:65063288-65063307 None:intergenic 45.0%
AGTAGACTCGGCTTCTTCAA+CGG - chr3_3:65063323-65063342 None:intergenic 45.0%
! CTGGTCCATTTTCATGTGAC+AGG + chr3_3:65064250-65064269 Msa0464860:intron 45.0%
TTCATGTGACAGGACTACGA+TGG + chr3_3:65064260-65064279 Msa0464860:intron 45.0%
ATGACAGGTTCAAAACTGCG+AGG - chr3_3:65064350-65064369 None:intergenic 45.0%
GCTTTCATTGCAGAGTTTGG+AGG + chr3_3:65064740-65064759 Msa0464860:intron 45.0%
AGAGAAAAAGACTGCAGAGG+TGG + chr3_3:65065015-65065034 Msa0464860:three_prime_UTR 45.0%
! AGTGGTGGAAGTGATAGACA+TGG - chr3_3:65062753-65062772 None:intergenic 45.0%
CCATGGTTAGGGATTTGAAG+AGG - chr3_3:65062778-65062797 None:intergenic 45.0%
CCTCTTCAAATCCCTAACCA+TGG + chr3_3:65062775-65062794 Msa0464860:CDS 45.0%
! GTTTGGATTTGGAGTGGAAG+AGG - chr3_3:65062823-65062842 None:intergenic 45.0%
! GAAGAAGGTGGGTTTGGATT+TGG - chr3_3:65062834-65062853 None:intergenic 45.0%
ATGGAGAGATGGAGATTGAG+GGG - chr3_3:65062872-65062891 None:intergenic 45.0%
GATGGAGAGATGGAGATTGA+GGG - chr3_3:65062873-65062892 None:intergenic 45.0%
TGATGGAGAGATGGAGATTG+AGG - chr3_3:65062874-65062893 None:intergenic 45.0%
!!! GGTTGGTTTTGATGGAGAGA+TGG - chr3_3:65062883-65062902 None:intergenic 45.0%
!!! GAAAGAGCGGTTGGTTTTGA+TGG - chr3_3:65062891-65062910 None:intergenic 45.0%
CCTTCTTGAGCAACGAACAA+GGG - chr3_3:65062917-65062936 None:intergenic 45.0%
AGCTTCTTCGTCTAGAGAAG+TGG - chr3_3:65062951-65062970 None:intergenic 45.0%
ACTTCTCTAGACGAAGAAGC+TGG + chr3_3:65062950-65062969 Msa0464860:CDS 45.0%
AAGCTGGATTGAGTCTCGAT+TGG + chr3_3:65062966-65062985 Msa0464860:CDS 45.0%
AGCTGGATTGAGTCTCGATT+GGG + chr3_3:65062967-65062986 Msa0464860:CDS 45.0%
TTCAGCAGAATCATCACCAG+CGG - chr3_3:65063023-65063042 None:intergenic 45.0%
!! GCCATGCTTTTTGAACAAGC+CGG + chr3_3:65063127-65063146 Msa0464860:CDS 45.0%
! TCCGGCTTGTTCAAAAAGCA+TGG - chr3_3:65063131-65063150 None:intergenic 45.0%
CAAATCCAAAACCACGACTC+CGG - chr3_3:65063288-65063307 None:intergenic 45.0%
AGTAGACTCGGCTTCTTCAA+CGG - chr3_3:65063323-65063342 None:intergenic 45.0%
! CTGGTCCATTTTCATGTGAC+AGG + chr3_3:65064250-65064269 Msa0464860:intron 45.0%
TTCATGTGACAGGACTACGA+TGG + chr3_3:65064260-65064279 Msa0464860:intron 45.0%
ATGACAGGTTCAAAACTGCG+AGG - chr3_3:65064350-65064369 None:intergenic 45.0%
GCTTTCATTGCAGAGTTTGG+AGG + chr3_3:65064740-65064759 Msa0464860:intron 45.0%
AGAGAAAAAGACTGCAGAGG+TGG + chr3_3:65065015-65065034 Msa0464860:three_prime_UTR 45.0%
!! TGGTGGTGGTGGTGATAGAA+GGG - chr3_3:65062718-65062737 None:intergenic 50.0%
!! AGTGATAGACATGGTGGTGG+TGG - chr3_3:65062744-65062763 None:intergenic 50.0%
GGAAGTGATAGACATGGTGG+TGG - chr3_3:65062747-65062766 None:intergenic 50.0%
GGTGGAAGTGATAGACATGG+TGG - chr3_3:65062750-65062769 None:intergenic 50.0%
TAGGGATTTGAAGAGGGGAG+TGG - chr3_3:65062771-65062790 None:intergenic 50.0%
! AGGTGGGTTTGGATTTGGAG+TGG - chr3_3:65062829-65062848 None:intergenic 50.0%
! AAGGGAGAAGAAGGTGGGTT+TGG - chr3_3:65062840-65062859 None:intergenic 50.0%
TTTGGAGGGAAGGGAGAAGA+AGG - chr3_3:65062849-65062868 None:intergenic 50.0%
ATTGAGGGGTTTGGAGGGAA+GGG - chr3_3:65062858-65062877 None:intergenic 50.0%
TGGAGATTGAGGGGTTTGGA+GGG - chr3_3:65062863-65062882 None:intergenic 50.0%
ATGGAGATTGAGGGGTTTGG+AGG - chr3_3:65062864-65062883 None:intergenic 50.0%
GAGATGGAGATTGAGGGGTT+TGG - chr3_3:65062867-65062886 None:intergenic 50.0%
CGAACAAGGGAGAGAAAGAG+CGG - chr3_3:65062904-65062923 None:intergenic 50.0%
CCCTTGTTCGTTGCTCAAGA+AGG + chr3_3:65062914-65062933 Msa0464860:CDS 50.0%
GCCTTCTTGAGCAACGAACA+AGG - chr3_3:65062918-65062937 None:intergenic 50.0%
ACCAGCGGTTTCAGTTTCAG+CGG - chr3_3:65063008-65063027 None:intergenic 50.0%
CTCAGCAATCTCAACGGTTC+CGG - chr3_3:65063149-65063168 None:intergenic 50.0%
GGACTACGATGGAAGATCGT+TGG + chr3_3:65064271-65064290 Msa0464860:intron 50.0%
ACTGGTCGATCACGTGGATT+TGG + chr3_3:65064479-65064498 Msa0464860:CDS 50.0%
CATTGCAGAGTTTGGAGGGT+AGG + chr3_3:65064745-65064764 Msa0464860:intron 50.0%
!! TGGTGGTGGTGGTGATAGAA+GGG - chr3_3:65062718-65062737 None:intergenic 50.0%
!! AGTGATAGACATGGTGGTGG+TGG - chr3_3:65062744-65062763 None:intergenic 50.0%
GGAAGTGATAGACATGGTGG+TGG - chr3_3:65062747-65062766 None:intergenic 50.0%
GGTGGAAGTGATAGACATGG+TGG - chr3_3:65062750-65062769 None:intergenic 50.0%
TAGGGATTTGAAGAGGGGAG+TGG - chr3_3:65062771-65062790 None:intergenic 50.0%
! AGGTGGGTTTGGATTTGGAG+TGG - chr3_3:65062829-65062848 None:intergenic 50.0%
! AAGGGAGAAGAAGGTGGGTT+TGG - chr3_3:65062840-65062859 None:intergenic 50.0%
TTTGGAGGGAAGGGAGAAGA+AGG - chr3_3:65062849-65062868 None:intergenic 50.0%
ATTGAGGGGTTTGGAGGGAA+GGG - chr3_3:65062858-65062877 None:intergenic 50.0%
TGGAGATTGAGGGGTTTGGA+GGG - chr3_3:65062863-65062882 None:intergenic 50.0%
ATGGAGATTGAGGGGTTTGG+AGG - chr3_3:65062864-65062883 None:intergenic 50.0%
GAGATGGAGATTGAGGGGTT+TGG - chr3_3:65062867-65062886 None:intergenic 50.0%
CGAACAAGGGAGAGAAAGAG+CGG - chr3_3:65062904-65062923 None:intergenic 50.0%
CCCTTGTTCGTTGCTCAAGA+AGG + chr3_3:65062914-65062933 Msa0464860:CDS 50.0%
GCCTTCTTGAGCAACGAACA+AGG - chr3_3:65062918-65062937 None:intergenic 50.0%
ACCAGCGGTTTCAGTTTCAG+CGG - chr3_3:65063008-65063027 None:intergenic 50.0%
CTCAGCAATCTCAACGGTTC+CGG - chr3_3:65063149-65063168 None:intergenic 50.0%
GGACTACGATGGAAGATCGT+TGG + chr3_3:65064271-65064290 Msa0464860:intron 50.0%
ACTGGTCGATCACGTGGATT+TGG + chr3_3:65064479-65064498 Msa0464860:CDS 50.0%
CATTGCAGAGTTTGGAGGGT+AGG + chr3_3:65064745-65064764 Msa0464860:intron 50.0%
!! GTGGTGGTGGTGGTGATAGA+AGG - chr3_3:65062719-65062738 None:intergenic 55.0%
!! GATAGACATGGTGGTGGTGG+TGG - chr3_3:65062741-65062760 None:intergenic 55.0%
GGATTTGAAGAGGGGAGTGG+TGG - chr3_3:65062768-65062787 None:intergenic 55.0%
GCAGGAATCGGCCATGGTTA+GGG - chr3_3:65062789-65062808 None:intergenic 55.0%
GGATGAGAGGAGGCAGGAAT+CGG - chr3_3:65062801-65062820 None:intergenic 55.0%
AGTGGAAGAGGGATGAGAGG+AGG - chr3_3:65062811-65062830 None:intergenic 55.0%
TGGAGTGGAAGAGGGATGAG+AGG - chr3_3:65062814-65062833 None:intergenic 55.0%
GAGGGAAGGGAGAAGAAGGT+GGG - chr3_3:65062845-65062864 None:intergenic 55.0%
GATTGAGGGGTTTGGAGGGA+AGG - chr3_3:65062859-65062878 None:intergenic 55.0%
CAAGGGAGAGAAAGAGCGGT+TGG - chr3_3:65062900-65062919 None:intergenic 55.0%
GGTTTCAGTTTCAGCGGCGT+CGG - chr3_3:65063002-65063021 None:intergenic 55.0%
CGGAACCGTTGAGATTGCTG+AGG + chr3_3:65063147-65063166 Msa0464860:CDS 55.0%
! AGAGAGACTGGTCGATCACG+TGG + chr3_3:65064473-65064492 Msa0464860:CDS 55.0%
GATGCCATTGCCGCTCTTGA+TGG + chr3_3:65064536-65064555 Msa0464860:CDS 55.0%
CTGACCATCAAGAGCGGCAA+TGG - chr3_3:65064543-65064562 None:intergenic 55.0%
! CATTGCCGCTCTTGATGGTC+AGG + chr3_3:65064541-65064560 Msa0464860:CDS 55.0%
ACTCAAAAGGAGCCGCGTCT+GGG - chr3_3:65064801-65064820 None:intergenic 55.0%
TACTCAAAAGGAGCCGCGTC+TGG - chr3_3:65064802-65064821 None:intergenic 55.0%
! GGAGTAGCCGGTTTCATGCT+AGG + chr3_3:65064908-65064927 Msa0464860:three_prime_UTR 55.0%
AGACTGCAGAGGTGGAGAGT+AGG + chr3_3:65065023-65065042 Msa0464860:three_prime_UTR 55.0%
CAGAGGTGGAGAGTAGGCAT+GGG + chr3_3:65065029-65065048 Msa0464860:three_prime_UTR 55.0%
!! GTGGTGGTGGTGGTGATAGA+AGG - chr3_3:65062719-65062738 None:intergenic 55.0%
!! GATAGACATGGTGGTGGTGG+TGG - chr3_3:65062741-65062760 None:intergenic 55.0%
GGATTTGAAGAGGGGAGTGG+TGG - chr3_3:65062768-65062787 None:intergenic 55.0%
GCAGGAATCGGCCATGGTTA+GGG - chr3_3:65062789-65062808 None:intergenic 55.0%
GGATGAGAGGAGGCAGGAAT+CGG - chr3_3:65062801-65062820 None:intergenic 55.0%
AGTGGAAGAGGGATGAGAGG+AGG - chr3_3:65062811-65062830 None:intergenic 55.0%
TGGAGTGGAAGAGGGATGAG+AGG - chr3_3:65062814-65062833 None:intergenic 55.0%
GAGGGAAGGGAGAAGAAGGT+GGG - chr3_3:65062845-65062864 None:intergenic 55.0%
GATTGAGGGGTTTGGAGGGA+AGG - chr3_3:65062859-65062878 None:intergenic 55.0%
CAAGGGAGAGAAAGAGCGGT+TGG - chr3_3:65062900-65062919 None:intergenic 55.0%
GGTTTCAGTTTCAGCGGCGT+CGG - chr3_3:65063002-65063021 None:intergenic 55.0%
CGGAACCGTTGAGATTGCTG+AGG + chr3_3:65063147-65063166 Msa0464860:CDS 55.0%
! AGAGAGACTGGTCGATCACG+TGG + chr3_3:65064473-65064492 Msa0464860:CDS 55.0%
GATGCCATTGCCGCTCTTGA+TGG + chr3_3:65064536-65064555 Msa0464860:CDS 55.0%
CTGACCATCAAGAGCGGCAA+TGG - chr3_3:65064543-65064562 None:intergenic 55.0%
! CATTGCCGCTCTTGATGGTC+AGG + chr3_3:65064541-65064560 Msa0464860:CDS 55.0%
ACTCAAAAGGAGCCGCGTCT+GGG - chr3_3:65064801-65064820 None:intergenic 55.0%
TACTCAAAAGGAGCCGCGTC+TGG - chr3_3:65064802-65064821 None:intergenic 55.0%
! GGAGTAGCCGGTTTCATGCT+AGG + chr3_3:65064908-65064927 Msa0464860:three_prime_UTR 55.0%
AGACTGCAGAGGTGGAGAGT+AGG + chr3_3:65065023-65065042 Msa0464860:three_prime_UTR 55.0%
CAGAGGTGGAGAGTAGGCAT+GGG + chr3_3:65065029-65065048 Msa0464860:three_prime_UTR 55.0%
!! AGACATGGTGGTGGTGGTGG+TGG - chr3_3:65062738-65062757 None:intergenic 60.0%
GGCAGGAATCGGCCATGGTT+AGG - chr3_3:65062790-65062809 None:intergenic 60.0%
GAAGAGGGATGAGAGGAGGC+AGG - chr3_3:65062807-65062826 None:intergenic 60.0%
GGAGGGAAGGGAGAAGAAGG+TGG - chr3_3:65062846-65062865 None:intergenic 60.0%
GCCGCTGAAACTGAAACCGC+TGG + chr3_3:65063004-65063023 Msa0464860:CDS 60.0%
AGAGAAACGGACCGGAGTCG+TGG + chr3_3:65063274-65063293 Msa0464860:CDS 60.0%
! ACGGACCGGAGTCGTGGTTT+TGG + chr3_3:65063280-65063299 Msa0464860:CDS 60.0%
CGCTCGGGTCGAGATCCTTT+AGG - chr3_3:65064314-65064333 None:intergenic 60.0%
AGGTGCACGCTCAGTACGCT+CGG - chr3_3:65064330-65064349 None:intergenic 60.0%
! GAGTGAGCGTTGCCGAAGAC+AGG + chr3_3:65064775-65064794 Msa0464860:CDS 60.0%
GCAGAGGTGGAGAGTAGGCA+TGG + chr3_3:65065028-65065047 Msa0464860:three_prime_UTR 60.0%
!! AGACATGGTGGTGGTGGTGG+TGG - chr3_3:65062738-65062757 None:intergenic 60.0%
GGCAGGAATCGGCCATGGTT+AGG - chr3_3:65062790-65062809 None:intergenic 60.0%
GAAGAGGGATGAGAGGAGGC+AGG - chr3_3:65062807-65062826 None:intergenic 60.0%
GGAGGGAAGGGAGAAGAAGG+TGG - chr3_3:65062846-65062865 None:intergenic 60.0%
GCCGCTGAAACTGAAACCGC+TGG + chr3_3:65063004-65063023 Msa0464860:CDS 60.0%
AGAGAAACGGACCGGAGTCG+TGG + chr3_3:65063274-65063293 Msa0464860:CDS 60.0%
! ACGGACCGGAGTCGTGGTTT+TGG + chr3_3:65063280-65063299 Msa0464860:CDS 60.0%
CGCTCGGGTCGAGATCCTTT+AGG - chr3_3:65064314-65064333 None:intergenic 60.0%
AGGTGCACGCTCAGTACGCT+CGG - chr3_3:65064330-65064349 None:intergenic 60.0%
! GAGTGAGCGTTGCCGAAGAC+AGG + chr3_3:65064775-65064794 Msa0464860:CDS 60.0%
GCAGAGGTGGAGAGTAGGCA+TGG + chr3_3:65065028-65065047 Msa0464860:three_prime_UTR 60.0%
!! CATGGTGGTGGTGGTGGTGG+TGG - chr3_3:65062735-65062754 None:intergenic 65.0%
GAGGAGGCAGGAATCGGCCA+TGG - chr3_3:65062795-65062814 None:intergenic 65.0%
!! GTTTCAGCGGCGTCGGCAGT+GGG - chr3_3:65062995-65063014 None:intergenic 65.0%
!! AGTTTCAGCGGCGTCGGCAG+TGG - chr3_3:65062996-65063015 None:intergenic 65.0%
GGTGCACGCTCAGTACGCTC+GGG - chr3_3:65064329-65064348 None:intergenic 65.0%
!! CATGGTGGTGGTGGTGGTGG+TGG - chr3_3:65062735-65062754 None:intergenic 65.0%
GAGGAGGCAGGAATCGGCCA+TGG - chr3_3:65062795-65062814 None:intergenic 65.0%
!! GTTTCAGCGGCGTCGGCAGT+GGG - chr3_3:65062995-65063014 None:intergenic 65.0%
!! AGTTTCAGCGGCGTCGGCAG+TGG - chr3_3:65062996-65063015 None:intergenic 65.0%
GGTGCACGCTCAGTACGCTC+GGG - chr3_3:65064329-65064348 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:65062726-65062745 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:65062726-65062745 None:intergenic 70.0%
GCCGAAGACAGGCCCAGACG+CGG + chr3_3:65064786-65064805 Msa0464860:CDS 70.0%
GCCGCGTCTGGGCCTGTCTT+CGG - chr3_3:65064790-65064809 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:65062726-65062745 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:65062726-65062745 None:intergenic 70.0%
GCCGAAGACAGGCCCAGACG+CGG + chr3_3:65064786-65064805 Msa0464860:CDS 70.0%
GCCGCGTCTGGGCCTGTCTT+CGG - chr3_3:65064790-65064809 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 65062676 65065100 65062676 ID=Msa0464860;Name=Msa0464860
chr3_3 mRNA 65062676 65065100 65062676 ID=Msa0464860-mRNA-1;Parent=Msa0464860;Name=Msa0464860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=76|1|1|1|1|1|4|282|291
chr3_3 exon 65062676 65063168 65062676 ID=Msa0464860-mRNA-1:exon:14399;Parent=Msa0464860-mRNA-1
chr3_3 exon 65063262 65063363 65063262 ID=Msa0464860-mRNA-1:exon:14400;Parent=Msa0464860-mRNA-1
chr3_3 exon 65064272 65064562 65064272 ID=Msa0464860-mRNA-1:exon:14401;Parent=Msa0464860-mRNA-1
chr3_3 exon 65064753 65065100 65064753 ID=Msa0464860-mRNA-1:exon:14402;Parent=Msa0464860-mRNA-1
chr3_3 five_prime_UTR 65062676 65062751 65062676 ID=Msa0464860-mRNA-1:five_prime_utr;Parent=Msa0464860-mRNA-1
chr3_3 CDS 65062752 65063168 65062752 ID=Msa0464860-mRNA-1:cds;Parent=Msa0464860-mRNA-1
chr3_3 CDS 65063262 65063363 65063262 ID=Msa0464860-mRNA-1:cds;Parent=Msa0464860-mRNA-1
chr3_3 CDS 65064272 65064562 65064272 ID=Msa0464860-mRNA-1:cds;Parent=Msa0464860-mRNA-1
chr3_3 CDS 65064753 65064818 65064753 ID=Msa0464860-mRNA-1:cds;Parent=Msa0464860-mRNA-1
chr3_3 three_prime_UTR 65064819 65065100 65064819 ID=Msa0464860-mRNA-1:three_prime_utr;Parent=Msa0464860-mRNA-1
Gene Sequence

>Msa0464860

ATGTCTATCACTTCCACCACTCCCCTCTTCAAATCCCTAACCATGGCCGATTCCTGCCTCCTCTCATCCCTCTTCCACTCCAAATCCAAACCCACCTTCTTCTCCCTTCCCTCCAAACCCCTCAATCTCCATCTCTCCATCAAAACCAACCGCTCTTTCTCTCCCTTGTTCGTTGCTCAAGAAGGCGACACGCTCACCACTTCTCTAGACGAAGAAGCTGGATTGAGTCTCGATTGGGAGCCCACTGCCGACGCCGCTGAAACTGAAACCGCTGGTGATGATTCTGCTGAAGCTGAAGCTGATTTTGTTGAACCACCTGAGGAAGCAAAATTATTTGTTGGTAATTTGCCTTTTGATGTTGATAGTGAGAAATTGGCCATGCTTTTTGAACAAGCCGGAACCGTTGAGATTGCTGAGGTTATTTATAACAGAGAAACGGACCGGAGTCGTGGTTTTGGATTTGTAACTATGAGTACCGTTGAAGAAGCCGAGTCTACTGTCCAGAAGTTTAACGCCTATGACTACGATGGAAGATCGTTGGCTGTTAACAAGGCTTCTCCTAAAGGATCTCGACCCGAGCGTACTGAGCGTGCACCTCGCAGTTTTGAACCTGTCATAAGAATTTATGTTGGTAACTTGCCATGGGAAGTTGATAATAGTAGGCTAGAGCAAGTTTTTAGTGAACATGGTAAGGTTGTGAGTGCTCGAGTAGTCTATGATAGAGAGACTGGTCGATCACGTGGATTTGGCTTTGTCACAATGTCCGATGAAACTGAAATGAATGATGCCATTGCCGCTCTTGATGGTCAGAGTTTGGAGGGTAGGACAATAAGAGTGAGCGTTGCCGAAGACAGGCCCAGACGCGGCTCCTTTTGA
Protein sequence

>Msa0464860

MSITSTTPLFKSLTMADSCLLSSLFHSKSKPTFFSLPSKPLNLHLSIKTNRSFSPLFVAQEGDTLTTSLDEEAGLSLDWEPTADAAETETAGDDSAEAEADFVEPPEEAKLFVGNLPFDVDSEKLAMLFEQAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAESTVQKFNAYDYDGRSLAVNKASPKGSRPERTERAPRSFEPVIRIYVGNLPWEVDNSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAALDGQSLEGRTIRVSVAEDRPRRGSF*