AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0481570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481570 MtrunA17_Chr6g0467251 83.058 242 40 1 166 406 51 292 1.23e-151 432
Msa0481570 MtrunA17_Chr6g0467251 86.592 179 5 1 6 165 170 348 3.62e-96 291
Msa0481570 MtrunA17_Chr6g0467121 56.017 241 104 1 166 406 89 327 2.97e-94 288
Msa0481570 MtrunA17_Chr6g0467121 50.286 175 67 2 7 161 206 380 1.81e-46 164
Msa0481570 MtrunA17_Chr6g0467161 54.772 241 109 0 166 406 60 300 3.06e-94 286
Msa0481570 MtrunA17_Chr6g0467161 47.799 159 64 1 8 147 180 338 2.64e-40 146
Msa0481570 MtrunA17_Chr2g0279041 41.532 248 134 5 163 403 39 282 5.41e-54 182
Msa0481570 MtrunA17_Chr2g0279041 32.941 170 84 4 6 145 156 325 2.09e-16 79.7
Msa0481570 MtrunA17_Chr2g0292241 42.745 255 128 7 166 406 44 294 1.28e-52 179
Msa0481570 MtrunA17_Chr2g0292241 40.491 163 69 4 7 141 164 326 3.56e-28 114
Msa0481570 MtrunA17_Chr2g0292091 43.590 234 118 6 185 406 58 289 2.63e-52 178
Msa0481570 MtrunA17_Chr2g0292091 38.037 163 73 4 7 141 159 321 9.04e-23 98.6
Msa0481570 MtrunA17_Chr5g0405991 39.357 249 141 4 166 406 38 284 4.06e-52 177
Msa0481570 MtrunA17_Chr5g0405991 34.375 160 75 5 8 141 157 312 1.27e-19 89.0
Msa0481570 MtrunA17_Chr4g0013191 43.265 245 132 5 167 406 62 304 2.02e-51 176
Msa0481570 MtrunA17_Chr4g0013191 39.490 157 72 4 7 141 181 336 1.54e-21 94.7
Msa0481570 MtrunA17_Chr2g0292151 42.688 253 131 6 166 406 44 294 2.67e-50 173
Msa0481570 MtrunA17_Chr2g0292151 36.957 184 86 5 7 160 164 347 1.43e-26 109
Msa0481570 MtrunA17_Chr1g0194151 39.759 249 134 8 166 400 45 291 6.02e-50 171
Msa0481570 MtrunA17_Chr1g0194151 33.529 170 85 4 4 145 164 333 7.78e-19 87.0
Msa0481570 MtrunA17_Chr4g0013201 41.296 247 140 4 163 406 58 302 1.59e-49 171
Msa0481570 MtrunA17_Chr4g0013201 37.821 156 76 3 6 141 180 334 5.63e-21 93.2
Msa0481570 MtrunA17_Chr2g0292211 40.316 253 137 6 166 406 55 305 1.61e-49 171
Msa0481570 MtrunA17_Chr2g0292211 39.286 168 74 4 2 141 170 337 3.52e-26 108
Msa0481570 MtrunA17_Chr4g0053871 41.600 250 134 7 166 406 42 288 1.86e-49 170
Msa0481570 MtrunA17_Chr4g0053871 33.548 155 82 3 8 141 166 320 1.37e-17 83.2
Msa0481570 MtrunA17_Chr1g0197411 38.189 254 138 7 166 404 43 292 2.03e-49 170
Msa0481570 MtrunA17_Chr1g0197411 36.025 161 76 3 8 141 166 326 6.42e-21 92.8
Msa0481570 MtrunA17_Chr1g0188431 38.618 246 138 4 166 406 54 291 2.41e-49 170
Msa0481570 MtrunA17_Chr1g0188431 40.132 152 74 2 7 141 172 323 9.62e-27 109
Msa0481570 MtrunA17_Chr4g0076211 41.102 236 127 4 176 405 66 295 2.92e-49 170
Msa0481570 MtrunA17_Chr4g0076211 32.000 150 74 4 18 141 182 329 2.03e-13 70.9
Msa0481570 MtrunA17_Chr2g0296621 36.437 247 145 4 166 406 65 305 3.04e-49 170
Msa0481570 MtrunA17_Chr2g0296621 31.056 161 86 7 5 141 178 337 7.47e-13 69.3
Msa0481570 MtrunA17_Chr2g0292251 40.316 253 137 6 166 406 43 293 3.46e-49 170
Msa0481570 MtrunA17_Chr2g0292251 34.715 193 93 5 7 166 163 355 7.59e-25 104
Msa0481570 MtrunA17_Chr8g0371381 40.693 231 127 4 184 406 59 287 3.98e-49 169
Msa0481570 MtrunA17_Chr8g0371381 34.375 160 75 5 8 141 160 315 1.44e-18 85.9
Msa0481570 MtrunA17_Chr2g0292101 41.880 234 122 6 185 406 59 290 4.98e-49 169
Msa0481570 MtrunA17_Chr2g0292101 35.057 174 85 3 7 152 160 333 1.88e-22 97.4
Msa0481570 MtrunA17_Chr1g0148021 38.247 251 145 4 166 406 42 292 1.18e-48 168
Msa0481570 MtrunA17_Chr1g0148021 32.317 164 85 3 4 141 161 324 5.19e-20 90.1
Msa0481570 MtrunA17_Chr4g0063671 39.044 251 142 4 163 406 33 279 1.43e-48 167
Msa0481570 MtrunA17_Chr4g0063671 31.977 172 86 4 1 141 145 316 1.62e-14 73.9
Msa0481570 MtrunA17_Chr7g0225221 39.224 232 135 4 179 406 55 284 3.66e-48 166
Msa0481570 MtrunA17_Chr7g0225221 33.758 157 82 2 7 141 160 316 1.04e-19 89.4
Msa0481570 MtrunA17_Chr1g0157051 39.738 229 128 4 184 404 57 283 4.62e-48 166
Msa0481570 MtrunA17_Chr1g0157051 30.625 160 82 4 8 141 158 314 2.01e-14 73.6
Msa0481570 MtrunA17_Chr1g0164891 36.719 256 140 7 162 400 100 350 5.41e-48 168
Msa0481570 MtrunA17_Chr1g0164891 33.333 165 83 2 4 141 224 388 6.55e-21 93.6
Msa0481570 MtrunA17_Chr1g0175561 39.370 254 139 7 166 406 39 290 8.88e-48 166
Msa0481570 MtrunA17_Chr1g0175561 35.976 164 73 5 8 141 161 322 1.01e-19 89.4
Msa0481570 MtrunA17_Chr2g0320091 39.516 248 138 6 166 406 40 282 1.60e-47 164
Msa0481570 MtrunA17_Chr2g0320091 32.903 155 82 3 8 141 161 314 2.03e-15 76.6
Msa0481570 MtrunA17_Chr4g0072091 41.270 252 134 7 166 406 39 287 2.27e-47 164
Msa0481570 MtrunA17_Chr4g0072091 37.500 168 79 3 4 145 156 323 3.60e-22 96.3
Msa0481570 MtrunA17_Chr5g0438021 36.066 244 147 5 167 404 47 287 4.67e-47 164
Msa0481570 MtrunA17_Chr5g0438021 30.247 162 90 2 6 145 165 325 5.44e-16 78.6
Msa0481570 MtrunA17_Chr2g0291751 42.188 256 132 8 164 406 42 294 5.34e-47 164
Msa0481570 MtrunA17_Chr2g0291751 38.150 173 79 4 7 151 164 336 4.42e-26 107
Msa0481570 MtrunA17_Chr4g0046131 38.115 244 139 4 175 406 66 309 5.71e-47 164
Msa0481570 MtrunA17_Chr4g0046131 34.524 168 82 3 2 141 175 342 1.33e-20 92.0
Msa0481570 MtrunA17_Chr2g0320101 37.860 243 148 3 166 406 40 281 1.25e-46 162
Msa0481570 MtrunA17_Chr2g0320101 33.766 154 81 2 8 141 161 313 4.38e-17 81.6
Msa0481570 MtrunA17_Chr2g0320071 37.860 243 148 3 166 406 40 281 2.33e-46 161
Msa0481570 MtrunA17_Chr2g0320071 34.416 154 80 2 8 141 161 313 1.80e-18 85.5
Msa0481570 MtrunA17_Chr5g0404721 39.241 237 128 7 166 390 45 277 2.76e-46 162
Msa0481570 MtrunA17_Chr5g0404721 29.762 168 91 3 6 146 164 331 2.98e-15 76.3
Msa0481570 MtrunA17_Chr3g0114451 37.860 243 148 3 166 406 41 282 2.77e-46 161
Msa0481570 MtrunA17_Chr3g0114451 32.692 156 84 3 6 141 160 314 3.21e-17 82.0
Msa0481570 MtrunA17_Chr5g0402581 37.849 251 144 4 164 404 40 288 4.04e-46 161
Msa0481570 MtrunA17_Chr5g0402581 32.927 164 83 2 5 141 159 322 7.59e-19 86.7
Msa0481570 MtrunA17_Chr8g0364291 35.317 252 151 5 166 406 38 288 4.59e-46 161
Msa0481570 MtrunA17_Chr8g0364291 32.143 168 87 4 6 146 158 325 4.65e-19 87.4
Msa0481570 MtrunA17_Chr5g0401431 38.492 252 144 5 166 406 42 293 5.52e-46 161
Msa0481570 MtrunA17_Chr5g0401431 32.500 160 82 3 8 141 166 325 2.91e-16 79.3
Msa0481570 MtrunA17_Chr4g0013171 38.589 241 143 4 167 403 43 282 7.30e-46 160
Msa0481570 MtrunA17_Chr4g0013171 32.075 159 87 2 7 145 164 321 9.25e-19 86.7
Msa0481570 MtrunA17_Chr2g0292181 37.945 253 143 6 166 406 53 303 8.34e-46 161
Msa0481570 MtrunA17_Chr2g0292181 35.119 168 81 4 2 141 168 335 3.73e-22 97.1
Msa0481570 MtrunA17_Chr7g0254231 36.992 246 149 4 163 406 34 275 1.04e-45 160
Msa0481570 MtrunA17_Chr7g0254231 37.013 154 78 1 7 141 154 307 6.42e-22 95.5
Msa0481570 MtrunA17_Chr3g0106921 37.121 264 144 6 150 406 36 284 1.08e-45 160
Msa0481570 MtrunA17_Chr3g0106921 33.333 156 81 3 8 141 162 316 5.96e-16 78.2
Msa0481570 MtrunA17_Chr2g0292291 41.732 254 133 6 166 406 45 296 1.48e-45 160
Msa0481570 MtrunA17_Chr2g0292291 37.870 169 76 4 2 141 160 328 3.31e-21 94.0
Msa0481570 MtrunA17_Chr8g0372601 37.647 255 142 8 163 404 42 292 1.93e-45 159
Msa0481570 MtrunA17_Chr8g0372601 26.994 163 92 3 6 141 164 326 1.67e-13 71.2
Msa0481570 MtrunA17_Chr3g0129051 37.652 247 145 5 166 406 43 286 2.14e-45 159
Msa0481570 MtrunA17_Chr3g0129051 33.750 160 83 2 8 145 164 322 2.85e-18 85.1
Msa0481570 MtrunA17_Chr2g0292261 40.239 251 140 4 166 406 44 294 2.63e-45 160
Msa0481570 MtrunA17_Chr2g0292261 34.615 182 91 4 7 160 164 345 3.88e-20 90.9
Msa0481570 MtrunA17_Chr1g0194271 37.308 260 140 8 162 400 41 298 3.00e-45 159
Msa0481570 MtrunA17_Chr1g0194271 32.203 177 85 3 4 145 164 340 4.03e-16 79.0
Msa0481570 MtrunA17_Chr5g0402571 37.450 251 145 4 164 404 40 288 5.51e-45 158
Msa0481570 MtrunA17_Chr5g0402571 31.548 168 88 2 5 145 159 326 4.92e-17 81.6
Msa0481570 MtrunA17_Chr4g0068621 37.255 255 145 7 163 406 50 300 5.52e-45 158
Msa0481570 MtrunA17_Chr4g0068621 29.193 161 89 3 6 141 172 332 9.83e-15 74.7
Msa0481570 MtrunA17_Chr2g0292271 39.921 253 138 7 166 406 44 294 5.54e-45 159
Msa0481570 MtrunA17_Chr2g0292271 34.783 184 92 4 2 157 159 342 2.23e-22 97.4
Msa0481570 MtrunA17_Chr6g0477071 35.802 243 149 4 166 406 69 306 6.43e-45 158
Msa0481570 MtrunA17_Chr6g0477071 37.500 152 78 2 7 141 187 338 3.05e-22 97.1
Msa0481570 MtrunA17_Chr2g0292111 40.081 247 134 6 171 405 49 293 7.61e-45 159
Msa0481570 MtrunA17_Chr2g0292111 34.536 194 98 5 2 166 159 352 2.16e-24 103
Msa0481570 MtrunA17_Chr5g0432441 37.826 230 132 5 185 406 64 290 1.33e-44 157
Msa0481570 MtrunA17_Chr5g0432441 31.677 161 86 2 8 145 167 326 3.96e-17 81.6
Msa0481570 MtrunA17_Chr4g0013821 37.008 254 147 7 163 406 40 290 2.54e-44 157
Msa0481570 MtrunA17_Chr4g0013821 30.994 171 91 4 8 153 164 332 5.98e-18 84.3
Msa0481570 MtrunA17_Chr4g0075241 36.290 248 147 5 166 404 44 289 2.55e-44 156
Msa0481570 MtrunA17_Chr4g0075241 31.447 159 84 2 8 141 165 323 2.48e-18 85.5
Msa0481570 MtrunA17_Chr7g0258811 38.976 254 140 7 166 406 84 335 2.92e-44 157
Msa0481570 MtrunA17_Chr7g0258811 31.481 162 83 4 8 141 206 367 5.15e-15 75.9
Msa0481570 MtrunA17_Chr4g0013721 37.302 252 145 7 163 404 112 360 6.16e-44 157
Msa0481570 MtrunA17_Chr4g0013721 30.769 169 89 5 5 147 232 398 4.87e-18 85.5
Msa0481570 MtrunA17_Chr3g0128061 36.328 256 148 7 163 406 38 290 7.50e-44 155
Msa0481570 MtrunA17_Chr3g0128061 33.735 166 83 3 8 146 162 327 9.47e-19 86.7
Msa0481570 MtrunA17_Chr7g0244461 36.626 243 149 5 167 406 36 276 3.46e-43 153
Msa0481570 MtrunA17_Chr7g0244461 33.540 161 86 2 1 141 149 308 4.19e-18 84.3
Msa0481570 MtrunA17_Chr1g0204011 39.565 230 125 6 185 404 61 286 4.19e-43 153
Msa0481570 MtrunA17_Chr1g0204011 29.193 161 86 3 7 141 160 318 3.49e-15 75.9
Msa0481570 MtrunA17_Chr1g0181431 33.068 251 159 5 163 406 39 287 6.29e-43 152
Msa0481570 MtrunA17_Chr1g0181431 29.054 148 81 2 18 141 172 319 3.89e-13 70.1
Msa0481570 MtrunA17_Chr2g0320031 37.885 227 138 3 166 390 41 266 7.94e-43 152
Msa0481570 MtrunA17_Chr4g0038151 35.743 249 147 5 167 406 41 285 1.02e-42 152
Msa0481570 MtrunA17_Chr4g0038151 32.484 157 80 3 15 145 165 321 1.80e-14 73.9
Msa0481570 MtrunA17_Chr2g0322861 36.797 231 135 5 182 403 118 346 1.13e-42 154
Msa0481570 MtrunA17_Chr2g0322861 32.738 168 85 5 7 146 220 387 8.49e-17 81.6
Msa0481570 MtrunA17_Chr4g0024121 36.948 249 143 7 163 400 39 284 2.33e-42 151
Msa0481570 MtrunA17_Chr4g0024121 30.864 162 85 4 7 141 161 322 4.87e-17 81.6
Msa0481570 MtrunA17_Chr4g0038161 36.145 249 146 5 167 406 40 284 5.11e-42 150
Msa0481570 MtrunA17_Chr4g0038161 33.758 157 78 3 15 145 164 320 4.49e-15 75.5
Msa0481570 MtrunA17_Chr7g0244451 38.938 226 131 5 185 406 58 280 1.08e-41 149
Msa0481570 MtrunA17_Chr7g0244451 33.333 159 85 2 7 145 159 316 3.89e-16 79.0
Msa0481570 MtrunA17_Chr2g0299691 37.008 254 145 6 166 406 71 322 1.38e-41 150
Msa0481570 MtrunA17_Chr2g0299691 32.000 175 87 4 4 146 185 359 8.25e-18 84.3
Msa0481570 MtrunA17_Chr5g0421411 36.287 237 139 4 182 406 12 248 2.53e-41 147
Msa0481570 MtrunA17_Chr7g0224371 37.727 220 135 2 182 400 62 280 3.40e-41 148
Msa0481570 MtrunA17_Chr7g0224371 31.818 154 85 4 7 141 166 318 1.07e-15 77.4
Msa0481570 MtrunA17_Chr2g0279061 40.465 215 117 5 196 403 13 223 4.41e-41 146
Msa0481570 MtrunA17_Chr2g0279061 32.353 170 85 4 6 145 97 266 7.48e-16 77.0
Msa0481570 MtrunA17_Chr5g0400331 35.385 260 150 7 163 406 38 295 5.90e-41 147
Msa0481570 MtrunA17_Chr5g0400331 29.885 174 88 4 2 141 154 327 3.73e-17 82.0
Msa0481570 MtrunA17_Chr3g0129061 36.585 246 147 5 167 406 44 286 6.88e-41 147
Msa0481570 MtrunA17_Chr3g0129061 31.875 160 86 2 8 145 164 322 1.32e-18 86.3
Msa0481570 MtrunA17_Chr4g0070951 38.723 235 134 6 166 392 43 275 8.63e-41 147
Msa0481570 MtrunA17_Chr4g0070951 30.769 169 87 3 8 146 162 330 1.72e-15 77.0
Msa0481570 MtrunA17_Chr1g0181481 32.669 251 160 5 163 406 39 287 9.18e-41 147
Msa0481570 MtrunA17_Chr1g0181481 29.054 148 81 2 18 141 172 319 5.32e-13 69.7
Msa0481570 MtrunA17_Chr1g0213061 36.681 229 137 4 167 390 43 268 1.19e-40 147
Msa0481570 MtrunA17_Chr1g0213061 34.375 160 81 3 5 141 159 317 2.91e-17 82.4
Msa0481570 MtrunA17_Chr2g0320051 36.564 227 141 3 166 390 40 265 1.44e-40 146
Msa0481570 MtrunA17_Chr2g0320051 32.903 155 82 4 8 141 161 314 1.01e-12 68.6
Msa0481570 MtrunA17_Chr7g0268501 36.087 230 134 6 185 405 59 284 5.48e-40 145
Msa0481570 MtrunA17_Chr7g0268501 31.515 165 86 4 7 145 157 320 1.51e-19 89.0
Msa0481570 MtrunA17_Chr7g0268521 36.087 230 134 6 185 405 59 284 5.48e-40 145
Msa0481570 MtrunA17_Chr7g0268521 31.515 165 86 4 7 145 157 320 1.51e-19 89.0
Msa0481570 MtrunA17_Chr4g0038171 35.200 250 148 6 167 406 40 285 1.22e-39 144
Msa0481570 MtrunA17_Chr4g0038171 32.911 158 79 4 15 145 164 321 5.45e-13 69.3
Msa0481570 MtrunA17_Chr1g0181511 32.540 252 159 6 163 406 39 287 1.85e-39 143
Msa0481570 MtrunA17_Chr1g0181511 29.730 148 80 2 18 141 172 319 2.30e-14 73.6
Msa0481570 MtrunA17_Chr6g0460711 35.200 250 144 6 166 405 36 277 1.86e-39 143
Msa0481570 MtrunA17_Chr6g0460711 34.161 161 83 3 8 145 154 314 8.19e-17 80.9
Msa0481570 MtrunA17_Chr3g0136751 39.407 236 126 8 183 406 56 286 1.92e-39 143
Msa0481570 MtrunA17_Chr3g0136751 35.443 158 74 3 16 145 165 322 7.14e-16 78.2
Msa0481570 MtrunA17_Chr2g0320061 35.242 227 144 3 166 390 40 265 3.47e-39 142
Msa0481570 MtrunA17_Chr2g0320061 32.258 155 83 4 8 141 161 314 1.00e-13 71.6
Msa0481570 MtrunA17_Chr4g0013181 37.069 232 141 4 176 403 84 314 9.81e-39 142
Msa0481570 MtrunA17_Chr4g0013181 30.435 161 91 3 5 145 194 353 4.15e-16 79.0
Msa0481570 MtrunA17_Chr4g0043391 34.800 250 149 6 167 406 43 288 1.26e-38 141
Msa0481570 MtrunA17_Chr4g0043391 32.911 158 79 4 15 145 167 324 6.59e-13 69.3
Msa0481570 MtrunA17_Chr1g0155611 37.647 255 141 8 163 403 58 308 1.52e-38 142
Msa0481570 MtrunA17_Chr1g0155611 31.288 163 84 4 7 141 181 343 1.78e-14 74.3
Msa0481570 MtrunA17_Chr3g0129041 36.214 243 146 5 167 403 44 283 1.62e-38 141
Msa0481570 MtrunA17_Chr3g0129041 30.625 160 88 2 8 145 164 322 2.01e-13 70.9
Msa0481570 MtrunA17_Chr6g0451571 36.325 234 140 5 182 406 65 298 2.30e-38 140
Msa0481570 MtrunA17_Chr6g0451571 33.939 165 84 4 2 141 166 330 2.31e-17 82.8
Msa0481570 MtrunA17_Chr2g0329641 33.594 256 154 6 163 406 48 299 1.36e-37 139
Msa0481570 MtrunA17_Chr2g0329641 33.133 166 80 3 7 141 166 331 2.12e-18 85.5
Msa0481570 MtrunA17_Chr3g0106901 37.551 245 146 6 166 406 46 287 1.41e-37 138
Msa0481570 MtrunA17_Chr3g0106901 33.974 156 82 3 6 141 165 319 6.41e-19 87.0
Msa0481570 MtrunA17_Chr2g0316481 34.164 281 143 7 166 406 91 369 5.43e-37 139
Msa0481570 MtrunA17_Chr4g0074851 32.549 255 155 6 163 406 44 292 6.26e-37 137
Msa0481570 MtrunA17_Chr4g0074851 30.519 154 83 2 18 147 177 330 1.97e-15 77.0
Msa0481570 MtrunA17_Chr5g0432351 36.111 252 144 9 166 406 40 285 1.03e-36 136
Msa0481570 MtrunA17_Chr5g0432351 32.051 156 84 4 7 141 163 317 4.06e-15 75.9
Msa0481570 MtrunA17_Chr7g0254201 34.137 249 155 5 163 406 32 276 5.85e-36 134
Msa0481570 MtrunA17_Chr7g0254201 32.927 164 86 3 7 147 152 314 1.06e-15 77.4
Msa0481570 MtrunA17_Chr2g0316831 33.808 281 144 7 166 406 127 405 1.03e-35 136
Msa0481570 MtrunA17_Chr2g0316791 34.028 288 140 8 163 406 88 369 1.60e-35 135
Msa0481570 MtrunA17_Chr2g0316191 33.333 282 143 6 167 406 92 370 3.81e-35 134
Msa0481570 MtrunA17_Chr3g0107881 41.284 218 108 9 185 390 61 270 2.54e-34 130
Msa0481570 MtrunA17_Chr3g0107881 33.333 156 81 4 8 141 166 320 8.46e-15 74.7
Msa0481570 MtrunA17_Chr5g0432341 38.197 233 127 9 185 406 59 285 3.90e-34 129
Msa0481570 MtrunA17_Chr5g0432341 32.051 156 84 4 7 141 163 317 7.43e-15 75.1
Msa0481570 MtrunA17_Chr2g0278671 33.617 235 141 4 178 403 51 279 1.37e-33 127
Msa0481570 MtrunA17_Chr5g0432331 34.921 252 147 9 166 406 71 316 4.69e-33 127
Msa0481570 MtrunA17_Chr5g0432331 28.846 156 89 4 7 141 194 348 1.41e-11 65.5
Msa0481570 MtrunA17_Chr5g0423911 81.944 72 13 0 78 149 4 75 8.65e-33 119
Msa0481570 MtrunA17_Chr5g0423911 94.286 35 2 0 372 406 1 35 3.03e-15 71.6
Msa0481570 MtrunA17_Chr2g0311241 29.630 324 146 5 163 406 72 393 1.07e-32 127
Msa0481570 MtrunA17_Chr2g0311251 33.463 257 129 5 190 406 49 303 2.53e-32 125
Msa0481570 MtrunA17_Chr2g0316811 35.874 223 115 6 163 360 62 281 1.05e-26 109
Msa0481570 MtrunA17_Chr2g0292281 39.891 183 90 6 233 406 9 180 3.73e-26 105
Msa0481570 MtrunA17_Chr2g0292281 37.255 153 78 5 7 141 60 212 1.55e-21 92.8
Msa0481570 MtrunA17_Chr5g0413051 30.268 261 163 9 162 406 84 341 1.72e-24 103
Msa0481570 MtrunA17_Chr5g0413051 30.178 169 89 3 6 145 209 377 2.95e-14 73.9
Msa0481570 MtrunA17_Chr4g0004591 30.292 274 119 7 163 406 89 320 1.16e-22 98.2
Msa0481570 MtrunA17_Chr5g0432401 34.156 243 100 11 176 406 56 250 2.17e-22 96.3
Msa0481570 MtrunA17_Chr3g0114461 38.255 149 88 4 261 406 9 156 7.50e-22 92.4
Msa0481570 MtrunA17_Chr3g0114461 32.298 161 87 4 6 145 33 192 4.90e-17 79.0
Msa0481570 MtrunA17_Chr2g0316141 30.488 246 120 7 197 406 11 241 5.69e-19 86.3
Msa0481570 MtrunA17_Chr2g0316181 30.488 246 120 7 197 406 11 241 5.69e-19 86.3
Msa0481570 MtrunA17_Chr1g0181501 31.579 152 97 4 261 406 3 153 4.06e-16 76.3
Msa0481570 MtrunA17_Chr1g0181501 27.879 165 94 3 1 141 22 185 5.73e-13 67.4
Msa0481570 MtrunA17_Chr3g0114491 39.175 97 57 2 166 261 33 128 6.96e-15 71.2
Msa0481570 MtrunA17_Chr6g0468731 44.928 69 34 2 190 258 22 86 4.66e-13 64.7
Msa0481570 MtrunA17_Chr5g0432321 38.136 118 69 3 272 387 17 132 4.47e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481570 AT1G71695.1 47.737 243 123 3 166 404 59 301 7.98e-70 224
Msa0481570 AT1G71695.1 39.227 181 88 3 6 166 180 358 3.87e-31 122
Msa0481570 AT2G41480.1 40.800 250 137 5 163 405 41 286 1.62e-52 178
Msa0481570 AT2G41480.1 32.558 172 85 4 5 145 157 328 2.00e-14 74.3
Msa0481570 AT5G14130.1 38.554 249 146 2 165 406 46 294 9.29e-52 176
Msa0481570 AT5G14130.1 33.728 169 87 3 2 145 162 330 1.08e-20 92.8
Msa0481570 AT5G14130.2 38.095 252 149 2 162 406 84 335 1.96e-51 177
Msa0481570 AT5G14130.2 33.728 169 87 3 2 145 203 371 1.72e-20 92.8
Msa0481570 AT5G06730.1 40.000 255 141 6 163 406 45 298 3.76e-51 176
Msa0481570 AT5G06730.1 34.706 170 83 4 8 149 169 338 1.13e-19 90.1
Msa0481570 AT5G06720.1 38.189 254 147 4 163 406 44 297 6.37e-50 172
Msa0481570 AT5G06720.1 32.099 162 82 4 8 141 168 329 5.53e-16 79.0
Msa0481570 AT3G50990.1 37.102 283 156 10 141 406 28 305 2.02e-49 171
Msa0481570 AT3G50990.1 31.288 163 85 5 6 141 175 337 1.81e-17 83.6
Msa0481570 AT5G42180.1 37.549 253 146 5 163 406 35 284 3.96e-49 169
Msa0481570 AT5G42180.1 31.875 160 80 4 8 141 157 313 2.53e-18 85.5
Msa0481570 AT5G15180.1 35.075 268 164 4 140 400 22 286 5.56e-49 169
Msa0481570 AT5G15180.1 32.727 165 85 3 7 145 165 329 1.37e-20 92.4
Msa0481570 AT1G49570.1 41.634 257 129 8 166 406 63 314 2.04e-48 168
Msa0481570 AT1G49570.1 30.357 168 88 3 7 145 183 350 3.80e-14 73.6
Msa0481570 AT3G32980.1 39.431 246 140 4 166 402 46 291 4.43e-48 167
Msa0481570 AT3G32980.1 29.570 186 96 5 7 162 166 346 6.97e-17 81.6
Msa0481570 AT5G64120.1 39.754 244 137 4 163 400 47 286 5.74e-48 166
Msa0481570 AT5G64120.1 33.133 166 86 3 5 145 163 328 1.72e-17 83.2
Msa0481570 AT4G08770.1 38.281 256 142 6 157 402 35 284 6.08e-48 167
Msa0481570 AT4G08770.1 33.333 195 99 5 1 165 153 346 2.78e-23 100
Msa0481570 AT3G28200.1 38.696 230 135 4 182 406 52 280 8.31e-48 166
Msa0481570 AT3G28200.1 33.333 165 89 2 2 145 152 316 1.19e-20 92.4
Msa0481570 AT1G30870.1 39.676 247 133 6 166 404 66 304 1.08e-47 166
Msa0481570 AT1G30870.1 32.759 174 89 5 2 147 174 347 9.77e-17 81.3
Msa0481570 AT2G18980.1 40.637 251 136 6 166 406 40 287 2.28e-47 165
Msa0481570 AT2G18980.1 36.585 164 78 4 4 141 156 319 7.05e-22 95.9
Msa0481570 AT4G37520.1 36.905 252 148 5 166 406 42 293 2.57e-47 165
Msa0481570 AT4G37520.1 33.333 168 86 3 4 145 162 329 7.83e-22 95.9
Msa0481570 AT4G08780.1 38.281 256 142 6 157 402 35 284 3.55e-47 165
Msa0481570 AT4G08780.1 31.282 195 103 5 1 165 153 346 2.58e-20 91.7
Msa0481570 AT4G37530.1 37.302 252 147 5 166 406 42 293 5.25e-47 164
Msa0481570 AT4G37530.1 32.941 170 88 3 2 145 160 329 2.62e-20 91.7
Msa0481570 AT3G21770.1 36.546 249 145 6 163 401 41 286 6.55e-47 164
Msa0481570 AT3G21770.1 27.439 164 91 3 6 141 161 324 3.91e-13 70.5
Msa0481570 AT3G49120.1 38.211 246 143 4 166 402 47 292 1.75e-46 163
Msa0481570 AT3G49120.1 29.189 185 96 5 7 161 167 346 1.27e-14 75.1
Msa0481570 AT5G05340.1 36.885 244 149 3 167 406 46 288 1.96e-46 162
Msa0481570 AT5G05340.1 31.056 161 88 2 7 145 165 324 4.78e-15 75.9
Msa0481570 AT3G49110.1 38.462 247 141 5 166 402 48 293 5.16e-46 162
Msa0481570 AT3G49110.1 29.570 186 96 5 7 162 168 348 9.20e-15 75.5
Msa0481570 AT2G24800.1 37.354 257 144 6 162 406 42 293 6.89e-46 161
Msa0481570 AT2G24800.1 30.435 161 81 3 15 145 170 329 2.78e-17 82.8
Msa0481570 AT5G24070.1 36.719 256 145 5 163 406 49 299 1.11e-45 160
Msa0481570 AT5G24070.1 30.814 172 88 3 5 145 164 335 6.47e-16 79.0
Msa0481570 AT4G36430.1 37.302 252 145 6 164 404 43 292 1.34e-45 160
Msa0481570 AT4G36430.1 31.902 163 84 4 6 141 164 326 3.35e-18 85.5
Msa0481570 AT5G19890.1 39.442 251 136 7 166 404 45 291 1.84e-45 160
Msa0481570 AT5G19890.1 31.792 173 84 5 5 146 159 328 4.17e-16 79.3
Msa0481570 AT4G37520.2 36.508 252 146 6 166 406 42 290 2.67e-45 159
Msa0481570 AT4G37520.2 33.333 168 86 3 4 145 159 326 6.94e-22 95.9
Msa0481570 AT4G33420.1 37.398 246 147 4 163 406 49 289 2.74e-45 159
Msa0481570 AT4G33420.1 39.103 156 78 3 7 145 170 325 1.24e-24 103
Msa0481570 AT3G49960.1 38.095 252 145 6 166 406 42 293 4.55e-45 159
Msa0481570 AT3G49960.1 33.529 170 87 4 2 145 160 329 2.28e-17 82.8
Msa0481570 AT2G18140.1 37.255 255 143 8 163 404 47 297 5.35e-45 159
Msa0481570 AT2G18140.1 29.940 167 90 4 7 146 170 336 7.04e-17 81.6
Msa0481570 AT5G40150.1 38.158 228 136 4 182 404 63 290 5.96e-45 158
Msa0481570 AT5G40150.1 34.337 166 87 2 2 145 163 328 2.20e-21 94.7
Msa0481570 AT5G58400.1 39.004 241 137 5 167 400 46 283 7.43e-45 158
Msa0481570 AT5G58400.1 32.500 160 85 2 8 145 167 325 1.35e-17 83.6
Msa0481570 AT4G16270.1 38.039 255 145 8 163 406 62 314 7.47e-45 159
Msa0481570 AT4G16270.1 30.675 163 84 6 6 141 184 344 2.82e-13 70.9
Msa0481570 AT4G33420.2 37.398 246 147 4 163 406 96 336 8.09e-45 159
Msa0481570 AT4G33420.2 39.103 156 78 3 7 145 217 372 2.58e-24 103
Msa0481570 AT2G34060.1 38.696 230 129 4 182 399 73 302 1.04e-44 158
Msa0481570 AT2G34060.1 29.518 166 89 4 4 141 177 342 6.71e-14 72.8
Msa0481570 AT5G39580.1 37.500 248 144 5 163 403 37 280 2.07e-44 157
Msa0481570 AT5G39580.1 32.530 166 86 4 6 145 154 319 1.19e-14 74.7
Msa0481570 AT5G67400.1 36.759 253 147 6 166 406 42 293 2.15e-44 157
Msa0481570 AT5G67400.1 33.939 165 83 3 7 145 165 329 3.88e-18 85.1
Msa0481570 AT2G38380.1 39.231 260 142 7 158 406 43 297 2.49e-44 157
Msa0481570 AT2G38380.1 35.503 169 80 6 8 147 167 335 7.12e-18 84.7
Msa0481570 AT5G51890.1 36.797 231 135 4 185 406 60 288 3.29e-44 156
Msa0481570 AT5G51890.1 31.447 159 80 4 7 138 159 315 2.14e-14 73.9
Msa0481570 AT4G37530.2 37.712 236 136 5 166 390 42 277 4.73e-44 155
Msa0481570 AT5G58390.1 38.095 231 129 6 185 406 55 280 5.05e-44 155
Msa0481570 AT5G58390.1 31.250 160 87 3 8 145 158 316 9.98e-16 77.8
Msa0481570 AT4G17690.1 39.216 255 136 7 164 406 39 286 5.87e-44 156
Msa0481570 AT4G17690.1 31.875 160 87 3 4 141 159 318 8.33e-16 78.2
Msa0481570 AT4G30170.1 36.653 251 146 5 166 406 42 289 1.01e-43 155
Msa0481570 AT4G30170.1 34.146 164 82 3 4 141 158 321 7.81e-20 90.1
Msa0481570 AT5G66390.1 36.965 257 145 8 163 406 45 297 1.06e-43 155
Msa0481570 AT5G66390.1 29.448 163 88 3 6 141 167 329 1.95e-15 77.4
Msa0481570 AT5G19880.1 39.216 255 140 6 166 406 40 293 1.11e-43 155
Msa0481570 AT5G19880.1 38.037 163 72 4 8 141 163 325 1.13e-22 98.2
Msa0481570 AT2G38390.1 40.329 243 134 6 175 406 55 297 1.22e-43 155
Msa0481570 AT2G38390.1 34.320 169 82 5 8 147 167 335 4.49e-18 85.5
Msa0481570 AT2G18150.1 34.902 255 149 8 163 404 48 298 1.22e-42 152
Msa0481570 AT2G18150.1 30.357 168 90 4 6 146 170 337 1.05e-18 87.0
Msa0481570 AT1G24110.1 36.864 236 136 7 182 406 53 286 1.36e-42 152
Msa0481570 AT1G24110.1 30.286 175 96 5 1 149 152 326 4.74e-17 82.0
Msa0481570 AT5G47000.1 39.149 235 129 5 182 406 64 294 1.91e-42 152
Msa0481570 AT5G47000.1 30.120 166 93 4 4 146 166 331 2.29e-13 71.2
Msa0481570 AT1G14540.1 36.066 244 151 5 167 406 37 279 1.94e-42 151
Msa0481570 AT1G14540.1 31.707 164 90 3 4 145 152 315 1.55e-15 77.4
Msa0481570 AT2G35380.1 38.400 250 139 7 163 399 42 289 3.00e-42 151
Msa0481570 AT2G35380.1 29.167 168 83 4 8 141 166 331 3.86e-13 70.5
Msa0481570 AT1G05240.1 34.694 245 151 3 163 400 38 280 3.04e-42 151
Msa0481570 AT1G05240.1 34.132 167 82 4 7 145 159 325 2.98e-18 85.5
Msa0481570 AT1G05250.1 34.694 245 151 3 163 400 38 280 3.04e-42 151
Msa0481570 AT1G05250.1 34.132 167 82 4 7 145 159 325 2.98e-18 85.5
Msa0481570 AT3G01190.1 35.270 241 147 3 166 400 41 278 4.81e-42 150
Msa0481570 AT3G01190.1 32.121 165 86 3 7 145 157 321 1.02e-20 92.4
Msa0481570 AT1G14550.1 35.918 245 151 6 167 406 42 285 8.44e-42 150
Msa0481570 AT1G14550.1 32.653 147 78 3 16 141 171 317 8.23e-16 78.2
Msa0481570 AT4G11290.1 35.458 251 145 6 171 406 41 289 8.93e-42 150
Msa0481570 AT4G11290.1 31.098 164 85 5 6 141 159 322 1.76e-17 83.2
Msa0481570 AT1G77100.1 36.885 244 150 3 162 403 35 276 9.12e-42 150
Msa0481570 AT2G22420.1 34.630 257 149 8 163 406 35 285 1.53e-41 149
Msa0481570 AT2G22420.1 31.737 167 87 3 6 147 157 321 1.57e-18 86.3
Msa0481570 AT1G05260.1 36.681 229 134 5 182 401 57 283 3.92e-41 148
Msa0481570 AT1G05260.1 27.976 168 93 5 7 146 159 326 1.34e-14 74.7
Msa0481570 AT5G64100.1 36.260 262 143 7 145 400 43 286 1.53e-40 147
Msa0481570 AT5G64100.1 29.341 167 89 4 7 145 166 331 5.66e-12 67.0
Msa0481570 AT4G21960.1 34.263 251 156 5 163 406 43 291 3.20e-40 146
Msa0481570 AT4G21960.1 29.605 152 83 2 18 145 176 327 3.19e-13 70.5
Msa0481570 AT2G39040.1 34.510 255 153 5 162 403 57 310 9.39e-40 145
Msa0481570 AT2G39040.1 32.738 168 81 7 5 141 180 346 1.31e-15 78.2
Msa0481570 AT5G64110.1 36.059 269 149 7 142 400 30 285 9.62e-40 145
Msa0481570 AT1G44970.1 36.614 254 147 7 163 404 57 308 1.78e-39 144
Msa0481570 AT1G44970.1 30.539 167 88 4 7 145 180 346 1.61e-14 74.7
Msa0481570 AT1G68850.1 33.594 256 153 6 166 406 45 298 3.23e-39 143
Msa0481570 AT5G17820.1 35.200 250 148 5 163 406 36 277 5.19e-39 142
Msa0481570 AT5G17820.1 34.615 156 80 3 8 141 154 309 1.41e-18 86.3
Msa0481570 AT3G03670.1 33.202 253 158 5 163 406 35 285 6.18e-39 142
Msa0481570 AT3G03670.1 35.366 164 80 3 8 145 158 321 2.96e-19 88.2
Msa0481570 AT4G31760.1 38.397 237 127 9 183 406 60 290 2.30e-38 141
Msa0481570 AT4G31760.1 29.747 158 83 4 16 145 169 326 2.90e-14 73.6
Msa0481570 AT5G17820.2 35.200 250 148 5 163 406 89 330 4.29e-38 141
Msa0481570 AT5G17820.2 34.615 156 80 3 8 141 207 362 3.22e-18 85.9
Msa0481570 AT2G43480.1 33.071 254 153 5 163 404 49 297 4.56e-38 140
Msa0481570 AT5G22410.1 31.908 304 167 10 122 404 3 287 7.38e-38 140
Msa0481570 AT5G22410.1 28.402 169 91 5 7 146 159 326 8.94e-12 66.2
Msa0481570 AT3G17070.1 33.597 253 154 5 166 406 53 303 1.16e-37 139
Msa0481570 AT3G17070.1 31.325 166 86 4 4 141 170 335 6.24e-17 81.6
Msa0481570 AT2G37130.2 32.806 253 158 7 163 406 11 260 2.59e-37 137
Msa0481570 AT2G37130.2 28.378 148 82 2 18 141 145 292 9.41e-14 72.0
Msa0481570 AT2G37130.1 32.806 253 158 7 163 406 42 291 5.86e-37 137
Msa0481570 AT2G37130.1 28.378 148 82 2 18 141 176 323 1.45e-13 71.6
Msa0481570 AT4G26010.1 34.400 250 148 8 163 406 34 273 7.56e-34 128
Msa0481570 AT4G26010.1 32.704 159 86 5 7 146 154 310 1.07e-15 77.8
Msa0481570 AT4G26010.2 34.400 250 148 8 163 406 62 301 1.18e-33 129
Msa0481570 AT4G26010.2 32.704 159 86 5 7 146 182 338 1.07e-15 78.2
Msa0481570 AT4G25980.1 33.186 226 141 4 185 403 60 282 2.24e-32 125
Msa0481570 AT4G33870.1 30.556 288 154 6 163 406 80 365 2.34e-32 126
Msa0481570 AT1G34510.1 31.513 238 147 8 175 406 46 273 1.72e-31 122
Msa0481570 AT1G34510.1 32.653 147 78 4 19 146 166 310 5.32e-14 72.8
Msa0481570 AT2G35380.2 37.000 200 112 6 212 399 4 201 3.67e-30 117
Msa0481570 AT2G35380.2 29.167 168 83 4 8 141 78 243 1.40e-13 70.5
Msa0481570 AT5G39580.2 38.922 167 98 2 163 329 37 199 3.82e-29 114
Msa0481570 AT3G17070.2 31.982 222 137 5 197 406 21 240 6.03e-29 114
Msa0481570 AT3G17070.2 31.325 166 86 4 4 141 107 272 1.99e-17 82.4
Msa0481570 AT2G24800.2 40.625 160 88 4 162 319 42 196 1.29e-27 110
Msa0481570 AT4G25980.2 39.259 135 79 2 185 319 105 236 1.61e-22 97.1
Msa0481570 AT4G32320.1 32.292 192 100 8 180 356 112 288 2.43e-12 68.2

Find 91 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATATTTAGTTGCTCTTTC+TGG 0.045980 3_3:-87813436 Msa0481570:CDS
TCGAGTTGTTTCTTGAAATT+TGG 0.098915 3_3:+87813340 None:intergenic
ACCTTAGATTTCCTATTATT+TGG 0.128939 3_3:+87819647 None:intergenic
TCGAGTTGTTTCTTGAAATT+TGG 0.165142 3_3:+87819950 None:intergenic
GTCCCTCAACGCCGTTAATT+TGG 0.208641 3_3:-87819906 Msa0481570:CDS
CTTTCTGGGGCGCACACTTT+TGG 0.229701 3_3:-87813421 Msa0481570:CDS
CTATCTGGTGCCCACACTTT+TGG 0.251851 3_3:-87820031 Msa0481570:CDS
CATATTTAGTTGCTCTTTCT+GGG 0.259697 3_3:-87813435 Msa0481570:CDS
TTCTTGAAATTTGGGTCTAT+TGG 0.284321 3_3:+87813349 None:intergenic
CGAGTTGTTTCTTGAAATTT+GGG 0.292061 3_3:+87813341 None:intergenic
AATATTATGTTACGCAATAA+AGG 0.298757 3_3:+87820207 None:intergenic
TATTGGTGGGTTTGTATCAA+TGG 0.316149 3_3:+87813366 None:intergenic
GAAATCTAAGGTGGCATCTA+TGG 0.324726 3_3:-87819636 Msa0481570:CDS
TTCACAATCTCCTTAGTCTT+AGG 0.327909 3_3:+87813178 None:intergenic
TTCACAATCTCCTTAGTCTT+AGG 0.327909 3_3:+87819788 None:intergenic
TCCCAATGGTACATCAAAAT+CGG 0.361315 3_3:+87813567 None:intergenic
TCCAAATAATAGGAAATCTA+AGG 0.367020 3_3:-87819648 Msa0481570:CDS
TCCTGCCAACTTCGCCTTAA+GGG 0.372726 3_3:-87814511 Msa0481570:CDS
GTGTTCAGTGATTGATCATT+CGG 0.377475 3_3:+87813307 None:intergenic
ATGATTCGGTTGAACATTGT+TGG 0.380602 3_3:+87819995 None:intergenic
ACCGATGTAGTTGCTCTATC+TGG 0.387253 3_3:-87820046 Msa0481570:CDS
TTGAAATTTGGGTCTATTGG+TGG 0.400100 3_3:+87813352 None:intergenic
TTGAATAGCCTCTTCCCTTA+AGG 0.400879 3_3:+87814497 None:intergenic
TCTGTTCGTGCAAATGGTAC+TGG 0.412087 3_3:+87820109 None:intergenic
TCCCTTAAGGCGAAGTTGGC+AGG 0.412132 3_3:+87814510 None:intergenic
AGTTCATCTGTTCGTGCAAA+TGG 0.412175 3_3:+87820103 None:intergenic
TTGAAATTTGGTTCGATTGG+TGG 0.414542 3_3:+87819962 None:intergenic
GTGCAGTTGCATTGAAGGTT+AGG 0.416101 3_3:+87813533 None:intergenic
CCCAATGGTACATCAAAATC+GGG 0.416121 3_3:+87813568 None:intergenic
GTCTGGTGCAGTTGCATTGA+AGG 0.420651 3_3:+87813528 None:intergenic
TCCGTTCTTTCAAATGGTAC+TGG 0.425247 3_3:+87813499 None:intergenic
TGTTCATCCGTTCTTTCAAA+TGG 0.431405 3_3:+87813493 None:intergenic
ATCCTGCCAACTTCGCCTTA+AGG 0.436419 3_3:-87814512 Msa0481570:CDS
TGAAATTTGGGTCTATTGGT+GGG 0.438967 3_3:+87813353 None:intergenic
AGCAAGTCATCCTAAGACTA+AGG 0.441256 3_3:-87813188 Msa0481570:CDS
GTCATGTCCTAAGGATTGTA+AGG 0.443180 3_3:-87815083 Msa0481570:intron
CTCTTCCCTTAAGGCGAAGT+TGG 0.444275 3_3:+87814506 None:intergenic
TGTTCAAACATCCAAATTAA+CGG 0.445931 3_3:+87819895 None:intergenic
ATCCAAATTAACGGCGTTGA+GGG 0.449517 3_3:+87819904 None:intergenic
GTGGGTCGGATTCAATGATT+CGG 0.450356 3_3:+87819981 None:intergenic
TTCTTGAAATTTGGTTCGAT+TGG 0.452274 3_3:+87819959 None:intergenic
TGAAATTTGGTTCGATTGGT+GGG 0.456433 3_3:+87819963 None:intergenic
GGCAAGTCATCCTAAGACTA+AGG 0.457751 3_3:-87819798 Msa0481570:CDS
TTTCAAACACATCTTCAAGA+TGG 0.468035 3_3:+87815058 None:intergenic
AATGGTACTGGAAGATTGTC+TGG 0.471550 3_3:+87813511 None:intergenic
AAAGATAGTGGCCAAGCTCC+TGG 0.486293 3_3:-87815036 Msa0481570:CDS
TTTGAATTTGTACAGCTTGG+AGG 0.486572 3_3:-87813592 Msa0481570:intron
ATTGAATAGTGTAGGACAAT+GGG 0.487933 3_3:+87813393 None:intergenic
ATTTGGTTCGATTGGTGGGT+CGG 0.494826 3_3:+87819967 None:intergenic
GGCACGAGAAGCTGTTCGTC+AGG 0.497284 3_3:-87814397 Msa0481570:intron
ATCACTGAACACAATTAACT+TGG 0.504188 3_3:-87813296 Msa0481570:CDS
TAGTCTTAGGATGACTTGCT+AGG 0.505832 3_3:+87813191 None:intergenic
CTGTTCGTGCAAATGGTACT+GGG 0.511334 3_3:+87820110 None:intergenic
GCCTGAGTATGCCAGGAGCT+TGG 0.511560 3_3:+87815025 None:intergenic
AGGCTGTCTCTTCTTCCCAA+TGG 0.513651 3_3:+87813553 None:intergenic
GCGTTGAGGGACTCCTCATT+CGG 0.514253 3_3:+87819917 None:intergenic
ATCTATGGTGGAAGAGGTGG+TGG 0.516164 3_3:-87819621 Msa0481570:CDS
TCCAGTACCATTTGAAAGAA+CGG 0.520517 3_3:-87813500 Msa0481570:CDS
TACATGTTATCGAATTTCGT+TGG 0.526519 3_3:+87813262 None:intergenic
GGTGGCATCTATGGTGGAAG+AGG 0.527491 3_3:-87819627 Msa0481570:CDS
GGCATCTATGGTGGAAGAGG+TGG 0.536043 3_3:-87819624 Msa0481570:CDS
GCCAAGCTCCTGGCATACTC+AGG 0.544317 3_3:-87815026 Msa0481570:CDS
CTTTCTGGTTAGAAGCAAAG+AGG 0.545522 3_3:+87819765 None:intergenic
GTTTACATCGGATCAAGACT+TGG 0.546163 3_3:-87819819 Msa0481570:CDS
CAACTTCGCCTTAAGGGAAG+AGG 0.550698 3_3:-87814505 Msa0481570:CDS
TATTAATCTCTTGAATCACC+AGG 0.551990 3_3:-87813236 Msa0481570:CDS
CATTCTAGTTAGAAGCAAAG+AGG 0.554926 3_3:+87813155 None:intergenic
TTACCTGGGAAAAGCAGTCA+TGG 0.555689 3_3:+87814995 None:intergenic
CGAAGCAACATGTCCGAATG+AGG 0.556767 3_3:-87819930 Msa0481570:CDS
GAATTGAAACAGGGATGTGA+TGG 0.557716 3_3:-87814579 Msa0481570:intron
CATCCAAATTAACGGCGTTG+AGG 0.565870 3_3:+87819903 None:intergenic
AGAAAGAGCAACTAAATATG+TGG 0.569912 3_3:+87813438 None:intergenic
TAATTCGTAGACAGTGTCCA+CGG 0.571658 3_3:-87814452 Msa0481570:CDS
GATTGAATAGTGTAGGACAA+TGG 0.573662 3_3:+87813392 None:intergenic
ATCTAAGGTGGCATCTATGG+TGG 0.582875 3_3:-87819633 Msa0481570:CDS
ATATTTAGTTGCTCTTTCTG+GGG 0.586133 3_3:-87813434 Msa0481570:CDS
AATTCGTAGACAGTGTCCAC+GGG 0.597781 3_3:-87814451 Msa0481570:CDS
TCCACGGGTTGTCTCGTGTG+CGG 0.607056 3_3:-87814436 Msa0481570:CDS
AATGAGCTTGACCAAAAGTG+TGG 0.611586 3_3:+87820020 None:intergenic
ATGGTTCGATTGAATAGTGT+AGG 0.630958 3_3:+87813385 None:intergenic
TCCGCACACGAGACAACCCG+TGG 0.634908 3_3:+87814435 None:intergenic
AAATAATAGGAAATCTAAGG+TGG 0.648910 3_3:-87819645 Msa0481570:CDS
ATGAGCTTGACCAAAAGTGT+GGG 0.655019 3_3:+87820021 None:intergenic
TCACCAGGGTGTGTTTACAT+CGG 0.667869 3_3:-87819831 Msa0481570:intron
ACCAGATAGAGCAACTACAT+CGG 0.673269 3_3:+87820045 None:intergenic
ATTAATCTCTTGAATCACCA+GGG 0.684393 3_3:-87813235 Msa0481570:CDS
ACTGTCTACGAATTAGAGCA+CGG 0.687392 3_3:+87814460 None:intergenic
GATCAGATGTAAACACACCC+TGG 0.689585 3_3:+87813218 None:intergenic
TGCGGACATACTCGTCCTCG+CGG 0.695282 3_3:-87814418 Msa0481570:CDS
CCAATGGTACATCAAAATCG+GGG 0.716165 3_3:+87813569 None:intergenic
GAACAGCTTCTCGTGCCGCG+AGG 0.721787 3_3:+87814403 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTATTAATTTTAAAACA+TGG + chr3_3:87814954-87814973 None:intergenic 10.0%
!!! TATGTTGATAATATATTTTT+TGG - chr3_3:87815117-87815136 Msa0481570:intron 10.0%
!!! AATTTGGTTTTTTATTTTTA+CGG - chr3_3:87817159-87817178 Msa0481570:intron 10.0%
!! TAAAAAAAATAAAACTATTC+GGG + chr3_3:87817213-87817232 None:intergenic 10.0%
!!! ATTTTAGGATTAAATTATTT+TGG - chr3_3:87817780-87817799 Msa0481570:intron 10.0%
!!! ATTATCTTTATCTTTTAAAT+AGG + chr3_3:87819352-87819371 None:intergenic 10.0%
!!! TATTGTTAATTTTTTAGGTA+AGG + chr3_3:87813888-87813907 None:intergenic 15.0%
!! TAAATCAAGAAGATATATTA+AGG + chr3_3:87814141-87814160 None:intergenic 15.0%
!! ATTCCCTATTAAAAAAATTA+GGG + chr3_3:87814221-87814240 None:intergenic 15.0%
!! AAATTAATAAAAGCTCTATA+TGG - chr3_3:87814961-87814980 Msa0481570:intron 15.0%
!! TATCAATATATCAAATTGAT+TGG + chr3_3:87815088-87815107 None:intergenic 15.0%
!!! TTTAGTCAAATTTTTGTTTA+TGG - chr3_3:87815943-87815962 Msa0481570:intron 15.0%
!!! TTTTGTTTATGGTTTTATTT+CGG - chr3_3:87815954-87815973 Msa0481570:intron 15.0%
!! AACAATAAAAAAAACCAATA+AGG + chr3_3:87816436-87816455 None:intergenic 15.0%
!!! TTTTTTTATTGTTTTCGATT+CGG - chr3_3:87816443-87816462 Msa0481570:intron 15.0%
!!! ATTTTTAAATATGTTTCACA+AGG - chr3_3:87816713-87816732 Msa0481570:intron 15.0%
!! TATGATCACAAAAAAAAAAA+AGG + chr3_3:87817115-87817134 None:intergenic 15.0%
!! TAGCAAAATAAATTATCTAA+AGG - chr3_3:87817350-87817369 Msa0481570:intron 15.0%
!! TTACCAAATAAAAAAATCAT+TGG - chr3_3:87817410-87817429 Msa0481570:intron 15.0%
!!! AATCCAATGATTTTTTTATT+TGG + chr3_3:87817416-87817435 None:intergenic 15.0%
!!! ATGATAGTTTTATTAATGAA+AGG - chr3_3:87817480-87817499 Msa0481570:intron 15.0%
!!! TGATAGTTTTATTAATGAAA+GGG - chr3_3:87817481-87817500 Msa0481570:intron 15.0%
!!! TATTTTATAAAGATGGTAAA+GGG + chr3_3:87818656-87818675 None:intergenic 15.0%
!!! AACTAACTATTTTATAAAGA+TGG + chr3_3:87818663-87818682 None:intergenic 15.0%
!! CGTAAATTATATGTAAATAA+AGG + chr3_3:87818754-87818773 None:intergenic 15.0%
!! AATATTATGTTACGCAATAA+AGG + chr3_3:87813166-87813185 None:intergenic 20.0%
!!! ATTTGTTAAAAAACTCTTTC+TGG + chr3_3:87813623-87813642 None:intergenic 20.0%
!!! TGTTATGTTATGTTATTTCA+CGG - chr3_3:87813806-87813825 Msa0481570:intron 20.0%
!! TCAAAAAAGAGGTTATTAAA+AGG + chr3_3:87814094-87814113 None:intergenic 20.0%
!!! TTTAATAACCTCTTTTTTGA+AGG - chr3_3:87814094-87814113 Msa0481570:intron 20.0%
!!! AACACCCTAATTTTTTTAAT+AGG - chr3_3:87814214-87814233 Msa0481570:intron 20.0%
!!! ACACCCTAATTTTTTTAATA+GGG - chr3_3:87814215-87814234 Msa0481570:intron 20.0%
!! CATTCCCTATTAAAAAAATT+AGG + chr3_3:87814222-87814241 None:intergenic 20.0%
!!! AGATTATGATAATCCTTTTT+TGG + chr3_3:87814341-87814360 None:intergenic 20.0%
!! CTAAGTTTGAAAATAAAGTT+TGG - chr3_3:87814609-87814628 Msa0481570:intron 20.0%
!!! TATCAAATTCATTTTGCATA+AGG + chr3_3:87815179-87815198 None:intergenic 20.0%
!! ACCGTTAGATTAAAAAATTA+TGG - chr3_3:87815531-87815550 Msa0481570:intron 20.0%
!!! CCCATAATTTTTTAATCTAA+CGG + chr3_3:87815535-87815554 None:intergenic 20.0%
!! CCGTTAGATTAAAAAATTAT+GGG - chr3_3:87815532-87815551 Msa0481570:intron 20.0%
!! TATGGGAATCATAAATTAAA+TGG - chr3_3:87815549-87815568 Msa0481570:intron 20.0%
!! TAAACGTAAACAAAAAAGAA+GGG - chr3_3:87815608-87815627 Msa0481570:intron 20.0%
!!! TTTATCATTGATTAAGTTTG+GGG + chr3_3:87816301-87816320 None:intergenic 20.0%
!!! GTTTATCATTGATTAAGTTT+GGG + chr3_3:87816302-87816321 None:intergenic 20.0%
!!! AGTTTATCATTGATTAAGTT+TGG + chr3_3:87816303-87816322 None:intergenic 20.0%
!!! AAGATAATCAGTATTGATAA+GGG + chr3_3:87816544-87816563 None:intergenic 20.0%
!!! TAAGATAATCAGTATTGATA+AGG + chr3_3:87816545-87816564 None:intergenic 20.0%
!! AATAAACAAAAATGAGGAAA+GGG + chr3_3:87817008-87817027 None:intergenic 20.0%
!! AAATAAACAAAAATGAGGAA+AGG + chr3_3:87817009-87817028 None:intergenic 20.0%
!!! TTTCCTCATTTTTGTTTATT+TGG - chr3_3:87817008-87817027 Msa0481570:intron 20.0%
!!! TTTTATTTTTACGGTAAGTA+TGG - chr3_3:87817168-87817187 Msa0481570:intron 20.0%
!!! ACACATTTTATTTTGAAAGA+CGG - chr3_3:87817245-87817264 Msa0481570:intron 20.0%
!! TTATATTTAGTTAACCACAA+CGG + chr3_3:87817304-87817323 None:intergenic 20.0%
!! ATATGATAGAAATGAAAAGA+GGG - chr3_3:87817728-87817747 Msa0481570:intron 20.0%
!!! GAATGAATGTATGAAATTTT+AGG - chr3_3:87817765-87817784 Msa0481570:intron 20.0%
!!! TATTTTGGTTACACAATTTT+TGG - chr3_3:87817795-87817814 Msa0481570:intron 20.0%
!!! CTCAATGATATTTTAAGAAA+AGG - chr3_3:87817899-87817918 Msa0481570:intron 20.0%
!! TTGCGTTAATTATATTATTC+TGG + chr3_3:87817943-87817962 None:intergenic 20.0%
!! TATTTATAGATGGATATTGA+GGG + chr3_3:87818080-87818099 None:intergenic 20.0%
!! ATATTTATAGATGGATATTG+AGG + chr3_3:87818081-87818100 None:intergenic 20.0%
!! TGGATGAAATTCAATAAATA+AGG - chr3_3:87818487-87818506 Msa0481570:intron 20.0%
!! GGATGAAATTCAATAAATAA+GGG - chr3_3:87818488-87818507 Msa0481570:intron 20.0%
!!! TAACATTTTTTCTATATCTC+AGG + chr3_3:87818573-87818592 None:intergenic 20.0%
!!! AAGAAACAATTATTTTGAGA+CGG - chr3_3:87818593-87818612 Msa0481570:intron 20.0%
!!! TTTCAAAAATTAGTCTACAA+TGG - chr3_3:87818629-87818648 Msa0481570:intron 20.0%
!!! CTATTTTATAAAGATGGTAA+AGG + chr3_3:87818657-87818676 None:intergenic 20.0%
!! TTTCCTTATGATAAAATAAG+AGG - chr3_3:87819313-87819332 Msa0481570:intron 20.0%
!!! TTACCTCTTATTTTATCATA+AGG + chr3_3:87819319-87819338 None:intergenic 20.0%
!!! ACATGAGATTAAATTTTTAC+TGG - chr3_3:87819602-87819621 Msa0481570:intron 20.0%
! TTGCGTAACATAATATTTGA+AGG - chr3_3:87813169-87813188 Msa0481570:CDS 25.0%
!!! GAATTTTTTTGATCCGAAAA+CGG + chr3_3:87813298-87813317 None:intergenic 25.0%
! TGTTCAAACATCCAAATTAA+CGG + chr3_3:87813478-87813497 None:intergenic 25.0%
! TACATATTATCGAATGTGTT+TGG + chr3_3:87813501-87813520 None:intergenic 25.0%
!!! ATTTGCTAATGCTTTTGTTA+AGG - chr3_3:87813641-87813660 Msa0481570:intron 25.0%
!!! TTTTGTTAAGGTTAGTCAAT+TGG - chr3_3:87813653-87813672 Msa0481570:intron 25.0%
! TCCAAATAATAGGAAATCTA+AGG - chr3_3:87813722-87813741 Msa0481570:intron 25.0%
! ACCTTAGATTTCCTATTATT+TGG + chr3_3:87813726-87813745 None:intergenic 25.0%
! AAATAATAGGAAATCTAAGG+TGG - chr3_3:87813725-87813744 Msa0481570:intron 25.0%
!!! GTTATGTTATGTTATTTCAC+GGG - chr3_3:87813807-87813826 Msa0481570:intron 25.0%
!!! TTATGTTATGTTATTTCACG+GGG - chr3_3:87813808-87813827 Msa0481570:intron 25.0%
! TGTATGAAATGTGTAATAAG+TGG - chr3_3:87814003-87814022 Msa0481570:intron 25.0%
!!! AAATATGTTCGTTTTTACAG+TGG - chr3_3:87814183-87814202 Msa0481570:intron 25.0%
!! TCGAAAACATTTTCCAAAAA+AGG - chr3_3:87814325-87814344 Msa0481570:intron 25.0%
!! AATCTATCATATAGAGCTTT+TGG + chr3_3:87815000-87815019 None:intergenic 25.0%
!! AGCTCTTTTCTTATTGAAAA+TGG - chr3_3:87815021-87815040 Msa0481570:CDS 25.0%
! AACAAATAAAAAGATGTGCA+AGG - chr3_3:87815143-87815162 Msa0481570:intron 25.0%
!!! GAGAACTTAGATATTTTTTC+TGG - chr3_3:87815211-87815230 Msa0481570:intron 25.0%
!!! CTTAGATATTTTTTCTGGAT+TGG - chr3_3:87815216-87815235 Msa0481570:intron 25.0%
!! ATTTATCTATACGGGTTTTT+CGG + chr3_3:87815381-87815400 None:intergenic 25.0%
! GTTTGCATATTTATCTATAC+GGG + chr3_3:87815389-87815408 None:intergenic 25.0%
! CGTTTGCATATTTATCTATA+CGG + chr3_3:87815390-87815409 None:intergenic 25.0%
! CGTATAGATAAATATGCAAA+CGG - chr3_3:87815388-87815407 Msa0481570:intron 25.0%
! GTATAGATAAATATGCAAAC+GGG - chr3_3:87815389-87815408 Msa0481570:intron 25.0%
! GGAATCATAAATTAAATGGA+TGG - chr3_3:87815553-87815572 Msa0481570:intron 25.0%
! GTAAACGTAAACAAAAAAGA+AGG - chr3_3:87815607-87815626 Msa0481570:intron 25.0%
!! CTAAAGTTGTATTGAGTTTT+GGG + chr3_3:87815854-87815873 None:intergenic 25.0%
!!! TCTAAAGTTGTATTGAGTTT+TGG + chr3_3:87815855-87815874 None:intergenic 25.0%
!! GGTTGAAATAAAATCCTTTT+CGG - chr3_3:87816068-87816087 Msa0481570:intron 25.0%
!! AACTTGTAAAAAGCATAACA+TGG - chr3_3:87816319-87816338 Msa0481570:intron 25.0%
! TTAATAAAAAGAGAACTGCT+TGG - chr3_3:87816513-87816532 Msa0481570:intron 25.0%
!!! AGATAATCAGTATTGATAAG+GGG + chr3_3:87816543-87816562 None:intergenic 25.0%
! CAATAAAATAGTAAGTGTTC+AGG - chr3_3:87816648-87816667 Msa0481570:intron 25.0%
! TAAAACATTAACACTGTGTT+TGG - chr3_3:87816780-87816799 Msa0481570:intron 25.0%
! TGTTTGGTTGAAAAGAAATA+AGG - chr3_3:87816796-87816815 Msa0481570:intron 25.0%
! AAGAGAGAAAAACATTATTG+TGG - chr3_3:87816891-87816910 Msa0481570:intron 25.0%
! AGAGAGAAAAACATTATTGT+GGG - chr3_3:87816892-87816911 Msa0481570:intron 25.0%
! CAATGGAAAGTGAAAATAAA+AGG + chr3_3:87816972-87816991 None:intergenic 25.0%
! TTGCCAAATAAACAAAAATG+AGG + chr3_3:87817014-87817033 None:intergenic 25.0%
! GATATGATAGAAATGAAAAG+AGG - chr3_3:87817727-87817746 Msa0481570:intron 25.0%
! ACTTGCATGATATTTATAGA+TGG + chr3_3:87818090-87818109 None:intergenic 25.0%
! ACCAATTAGTAAACCAAAAA+TGG - chr3_3:87818125-87818144 Msa0481570:intron 25.0%
!!! ACCATTTTTGGTTTACTAAT+TGG + chr3_3:87818129-87818148 None:intergenic 25.0%
! TTAGTAAACCAAAAATGGTA+AGG - chr3_3:87818130-87818149 Msa0481570:intron 25.0%
! TAGTAAACCAAAAATGGTAA+GGG - chr3_3:87818131-87818150 Msa0481570:intron 25.0%
!!! TCCTTGATTTTTTTTTACCT+GGG + chr3_3:87818392-87818411 None:intergenic 25.0%
!!! TTCCTTGATTTTTTTTTACC+TGG + chr3_3:87818393-87818412 None:intergenic 25.0%
!!! ATGTTGATTTGAATTGAAAC+AGG - chr3_3:87818781-87818800 Msa0481570:intron 25.0%
!!! TGTTGATTTGAATTGAAACA+GGG - chr3_3:87818782-87818801 Msa0481570:intron 25.0%
! AATGACTAACTTCAAGTATT+TGG + chr3_3:87819139-87819158 None:intergenic 25.0%
!!! TTCAATGTGTTATTTGATCA+CGG - chr3_3:87819659-87819678 Msa0481570:CDS 25.0%
! AGAAAATGTGAAATAATGCT+AGG + chr3_3:87819737-87819756 None:intergenic 25.0%
! TTATTTGAATTTGTACAGCT+TGG - chr3_3:87819775-87819794 Msa0481570:CDS 25.0%
! GATGAACTATTAACCGTTTT+CGG - chr3_3:87813282-87813301 Msa0481570:CDS 30.0%
! TTCTTGAAATTTGGTTCGAT+TGG + chr3_3:87813414-87813433 None:intergenic 30.0%
!! TCGAGTTGTTTCTTGAAATT+TGG + chr3_3:87813423-87813442 None:intergenic 30.0%
! CATGTTTTGCTCCAAATAAT+AGG - chr3_3:87813712-87813731 Msa0481570:intron 30.0%
!!! GTTAATTTTTTAGGTAAGGC+AGG + chr3_3:87813884-87813903 None:intergenic 30.0%
TAAACCATCATCAAACAAGA+TGG - chr3_3:87814656-87814675 Msa0481570:intron 30.0%
AAACCATCATCAAACAAGAT+GGG - chr3_3:87814657-87814676 Msa0481570:intron 30.0%
!! TTCTTCACCAAACTTGTTTT+TGG + chr3_3:87814685-87814704 None:intergenic 30.0%
! TGAATTTGATAAGAGCATGA+TGG - chr3_3:87815188-87815207 Msa0481570:intron 30.0%
! GAATTTGATAAGAGCATGAT+GGG - chr3_3:87815189-87815208 Msa0481570:intron 30.0%
GAAATCAAGCAACTTTCTAA+TGG - chr3_3:87815238-87815257 Msa0481570:intron 30.0%
!! TCTAATGGTATTTTGAGTGT+AGG - chr3_3:87815253-87815272 Msa0481570:intron 30.0%
! TTTATCTATACGGGTTTTTC+GGG + chr3_3:87815380-87815399 None:intergenic 30.0%
TGAGAGAATAACAGTAGAAA+GGG + chr3_3:87815635-87815654 None:intergenic 30.0%
GAGATGAAAATATGAGAAAG+AGG + chr3_3:87815749-87815768 None:intergenic 30.0%
AAGAGATTGAGAGATACAAT+TGG + chr3_3:87815790-87815809 None:intergenic 30.0%
AATTGTATCTCTCAATCTCT+TGG - chr3_3:87815789-87815808 Msa0481570:intron 30.0%
!!! GGCATATTTTAAAGCAAAAG+GGG + chr3_3:87815833-87815852 None:intergenic 30.0%
!!! GGGCATATTTTAAAGCAAAA+GGG + chr3_3:87815834-87815853 None:intergenic 30.0%
!!! TGGGCATATTTTAAAGCAAA+AGG + chr3_3:87815835-87815854 None:intergenic 30.0%
CTATTGTCTATCTTGCAATT+AGG + chr3_3:87816152-87816171 None:intergenic 30.0%
TGAGAATACAATGGAAATCT+AGG + chr3_3:87816181-87816200 None:intergenic 30.0%
! TTTCTCTCTTCCTTATTTCT+TGG + chr3_3:87816809-87816828 None:intergenic 30.0%
AGAGAAATAGAGTAGATTTG+AGG + chr3_3:87817583-87817602 None:intergenic 30.0%
GAAATTGAGAAGAGAGAAAT+AGG + chr3_3:87817636-87817655 None:intergenic 30.0%
! TTTCCTCTAAGAGATTATCA+AGG - chr3_3:87818223-87818242 Msa0481570:intron 30.0%
GACTAGATTGGAATTACTAT+TGG - chr3_3:87818262-87818281 Msa0481570:intron 30.0%
TTTCAAACACATCTTCAAGA+TGG + chr3_3:87818315-87818334 None:intergenic 30.0%
GATGTGTTTGAAAAAGATAG+TGG - chr3_3:87818322-87818341 Msa0481570:intron 30.0%
TCCCAGGTAAAAAAAAATCA+AGG - chr3_3:87818388-87818407 Msa0481570:intron 30.0%
AGTTAGTGAAGTAGTTAAGT+TGG - chr3_3:87818467-87818486 Msa0481570:intron 30.0%
CTATCCTTAACACAATTATG+AGG - chr3_3:87818713-87818732 Msa0481570:intron 30.0%
TGAACCTCATAATTGTGTTA+AGG + chr3_3:87818720-87818739 None:intergenic 30.0%
! TTTTCGTTTGCCTCATTTTA+AGG - chr3_3:87819049-87819068 Msa0481570:intron 30.0%
! TCTAAGATAAGGATGATCTT+AGG + chr3_3:87819267-87819286 None:intergenic 30.0%
TCTTTATCAGAATTCGAACT+CGG + chr3_3:87819465-87819484 None:intergenic 30.0%
! ATATGTGGCATCAAATTTTC+TGG + chr3_3:87819920-87819939 None:intergenic 30.0%
AGAAAGAGCAACTAAATATG+TGG + chr3_3:87819935-87819954 None:intergenic 30.0%
ACATATTTAGTTGCTCTTTC+TGG - chr3_3:87819934-87819953 Msa0481570:CDS 30.0%
CATATTTAGTTGCTCTTTCT+GGG - chr3_3:87819935-87819954 Msa0481570:CDS 30.0%
ATATTTAGTTGCTCTTTCTG+GGG - chr3_3:87819936-87819955 Msa0481570:CDS 30.0%
ATTGAATAGTGTAGGACAAT+GGG + chr3_3:87819980-87819999 None:intergenic 30.0%
TTCTTGAAATTTGGGTCTAT+TGG + chr3_3:87820024-87820043 None:intergenic 30.0%
!! CGAGTTGTTTCTTGAAATTT+GGG + chr3_3:87813422-87813441 None:intergenic 30.0%
!! TCGAGTTGTTTCTTGAAATT+TGG + chr3_3:87813423-87813442 None:intergenic 30.0%
ATCACTGAACACAATTAACT+TGG - chr3_3:87820074-87820093 Msa0481570:CDS 30.0%
TACATGTTATCGAATTTCGT+TGG + chr3_3:87820111-87820130 None:intergenic 30.0%
TATTAATCTCTTGAATCACC+AGG - chr3_3:87820134-87820153 Msa0481570:intron 30.0%
ATTAATCTCTTGAATCACCA+GGG - chr3_3:87820135-87820154 Msa0481570:intron 30.0%
CTGCATTTACACTGAAGTTT+AGG + chr3_3:87813231-87813250 None:intergenic 35.0%
!! ATGATTCGGTTGAACATTGT+TGG + chr3_3:87813378-87813397 None:intergenic 35.0%
! TGAAATTTGGTTCGATTGGT+GGG + chr3_3:87813410-87813429 None:intergenic 35.0%
! TTGAAATTTGGTTCGATTGG+TGG + chr3_3:87813411-87813430 None:intergenic 35.0%
ATTAACCTCTTGAATCACCA+GGG - chr3_3:87813525-87813544 Msa0481570:CDS 35.0%
! TTCACAATCTCCTTAGTCTT+AGG + chr3_3:87813585-87813604 None:intergenic 35.0%
!!! AGTCAATTGGATGTTTTGAC+TGG - chr3_3:87813666-87813685 Msa0481570:intron 35.0%
!!! GATGTTTTGACTGGAAATCA+AGG - chr3_3:87813675-87813694 Msa0481570:intron 35.0%
! GTAGTTTTTCTCAATGGGAT+TGG + chr3_3:87813917-87813936 None:intergenic 35.0%
ATCCCATTGAGAAAAACTAC+TGG - chr3_3:87813917-87813936 Msa0481570:intron 35.0%
! AGCCAGTAGTTTTTCTCAAT+GGG + chr3_3:87813922-87813941 None:intergenic 35.0%
! AAGCCAGTAGTTTTTCTCAA+TGG + chr3_3:87813923-87813942 None:intergenic 35.0%
!! GAAAAACTACTGGCTTAAGT+AGG - chr3_3:87813927-87813946 Msa0481570:intron 35.0%
! ACTGGCTTAAGTAGGTAATA+AGG - chr3_3:87813935-87813954 Msa0481570:intron 35.0%
CTGGCTTAAGTAGGTAATAA+GGG - chr3_3:87813936-87813955 Msa0481570:intron 35.0%
ATAAGTGGCTAATGAGAGTA+TGG - chr3_3:87814018-87814037 Msa0481570:intron 35.0%
ACTCAAGACCTTCAAAAAAG+AGG + chr3_3:87814105-87814124 None:intergenic 35.0%
ATCGTGAATTCGTTTGTGTA+AGG + chr3_3:87814270-87814289 None:intergenic 35.0%
CATCCACATGAGAAAATCAT+AGG - chr3_3:87814446-87814465 Msa0481570:CDS 35.0%
! CTTCCTATGATTTTCTCATG+TGG + chr3_3:87814452-87814471 None:intergenic 35.0%
ATATGAGTCAAACATGTCCA+TGG - chr3_3:87814508-87814527 Msa0481570:CDS 35.0%
TCATTCTGAACCAAAATCCA+TGG - chr3_3:87814535-87814554 Msa0481570:CDS 35.0%
! ATGACTTCATCCATGGATTT+TGG + chr3_3:87814548-87814567 None:intergenic 35.0%
ATCAATGATGACTTCATCCA+TGG + chr3_3:87814555-87814574 None:intergenic 35.0%
AACTACGAGGATTAGAAACA+AGG + chr3_3:87814637-87814656 None:intergenic 35.0%
!! TTGATGATGGTTTAACTACG+AGG + chr3_3:87814650-87814669 None:intergenic 35.0%
ATCAGAAACAATGCTAGACT+TGG - chr3_3:87814714-87814733 Msa0481570:intron 35.0%
CAAGGCTACAATCAATATGA+TGG - chr3_3:87814739-87814758 Msa0481570:intron 35.0%
! ACACTTTTACACAAGTAGCA+AGG - chr3_3:87814776-87814795 Msa0481570:intron 35.0%
TTCTCTTGATTGATGAATCC+AGG + chr3_3:87814925-87814944 None:intergenic 35.0%
AGATAAATATGCAAACGGGT+AGG - chr3_3:87815393-87815412 Msa0481570:intron 35.0%
CAGTTCTGTGTGGTTTAAAA+TGG - chr3_3:87815452-87815471 Msa0481570:intron 35.0%
! TCTGTGTGGTTTAAAATGGT+CGG - chr3_3:87815456-87815475 Msa0481570:intron 35.0%
TTAATCTAACGGTGCTTGTT+CGG + chr3_3:87815524-87815543 None:intergenic 35.0%
GTGAGAGAATAACAGTAGAA+AGG + chr3_3:87815636-87815655 None:intergenic 35.0%
GAAAATATGAGAAAGAGGAG+CGG + chr3_3:87815744-87815763 None:intergenic 35.0%
!! ATCTAGCCAAGTATTGATGA+AGG - chr3_3:87815874-87815893 Msa0481570:intron 35.0%
!! TCTAGCCAAGTATTGATGAA+GGG - chr3_3:87815875-87815894 Msa0481570:intron 35.0%
AACATCCCTTCATCAATACT+TGG + chr3_3:87815883-87815902 None:intergenic 35.0%
CAAAAACAAGTTAGCAGCTT+TGG + chr3_3:87815923-87815942 None:intergenic 35.0%
!!! TGGTTTTATTTCGGCATTCA+CGG - chr3_3:87815963-87815982 Msa0481570:intron 35.0%
CCTTGCAGATTTGATATCTT+CGG - chr3_3:87816093-87816112 Msa0481570:intron 35.0%
TCCATTGTATTCTCATGATG+CGG - chr3_3:87816186-87816205 Msa0481570:intron 35.0%
AGAAAATGGAGCAAAAACCA+AGG + chr3_3:87816251-87816270 None:intergenic 35.0%
!! TATAGTCATAACGGACATTC+TGG + chr3_3:87816278-87816297 None:intergenic 35.0%
! AGTTTGGGGTATAGTCATAA+CGG + chr3_3:87816287-87816306 None:intergenic 35.0%
AACCAGTAATGCAAACAAGT+GGG + chr3_3:87816485-87816504 None:intergenic 35.0%
TAACCAGTAATGCAAACAAG+TGG + chr3_3:87816486-87816505 None:intergenic 35.0%
! CTTGTTTGCATTACTGGTTA+AGG - chr3_3:87816486-87816505 Msa0481570:intron 35.0%
GATATCAAACTTCTCCTGTT+TGG - chr3_3:87816851-87816870 Msa0481570:intron 35.0%
CGAAGAAAGATAAAAGTGGT+GGG + chr3_3:87816919-87816938 None:intergenic 35.0%
TCAGCGAAGAAAGATAAAAG+TGG + chr3_3:87816923-87816942 None:intergenic 35.0%
AAATAAAAGGACCTTTCTCC+TGG + chr3_3:87816959-87816978 None:intergenic 35.0%
ATTGTATACATCTTCCGTTG+TGG - chr3_3:87817287-87817306 Msa0481570:intron 35.0%
!! AGTAGATTTGAGGTGTTGTT+TGG + chr3_3:87817573-87817592 None:intergenic 35.0%
GAAATAGGTGAGAGAGAATA+TGG + chr3_3:87817621-87817640 None:intergenic 35.0%
TTCTATTTCCTTCTCTCTCA+GGG + chr3_3:87817677-87817696 None:intergenic 35.0%
TTTCTATTTCCTTCTCTCTC+AGG + chr3_3:87817678-87817697 None:intergenic 35.0%
ATGTGTATACATGCACGTTA+TGG - chr3_3:87817853-87817872 Msa0481570:intron 35.0%
ATCTTATCTTGTCTCCTAGT+TGG - chr3_3:87818002-87818021 Msa0481570:intron 35.0%
! CTACTAACCCTTACCATTTT+TGG + chr3_3:87818141-87818160 None:intergenic 35.0%
!! GATGGATCGATTTTGTTGAA+CGG - chr3_3:87818809-87818828 Msa0481570:intron 35.0%
AAAATAGATGTAGAACCCGA+AGG + chr3_3:87819100-87819119 None:intergenic 35.0%
TGATCTTAGGACTAAAAGAG+CGG + chr3_3:87819254-87819273 None:intergenic 35.0%
! TGATGCACAAGTCTAAGATA+AGG + chr3_3:87819278-87819297 None:intergenic 35.0%
TAAAACATCTTTCGTAGCAC+TGG - chr3_3:87819387-87819406 Msa0481570:intron 35.0%
GCTCAAGTAGTTTATGTTGA+AGG - chr3_3:87819419-87819438 Msa0481570:intron 35.0%
GTAGTTTATGTTGAAGGAGT+TGG - chr3_3:87819425-87819444 Msa0481570:intron 35.0%
ATAGAGTAGTTGCTATAGCT+AGG + chr3_3:87819547-87819566 None:intergenic 35.0%
ATAATGCTAGGAATACGTAG+AGG + chr3_3:87819725-87819744 None:intergenic 35.0%
TTTGAATTTGTACAGCTTGG+AGG - chr3_3:87819778-87819797 Msa0481570:CDS 35.0%
TCCCAATGGTACATCAAAAT+CGG + chr3_3:87819806-87819825 None:intergenic 35.0%
TCCAGTACCATTTGAAAGAA+CGG - chr3_3:87819870-87819889 Msa0481570:intron 35.0%
TGTTCATCCGTTCTTTCAAA+TGG + chr3_3:87819880-87819899 None:intergenic 35.0%
GATTGAATAGTGTAGGACAA+TGG + chr3_3:87819981-87820000 None:intergenic 35.0%
ATGGTTCGATTGAATAGTGT+AGG + chr3_3:87819988-87820007 None:intergenic 35.0%
!! TATTGGTGGGTTTGTATCAA+TGG + chr3_3:87820007-87820026 None:intergenic 35.0%
TGAAATTTGGGTCTATTGGT+GGG + chr3_3:87820020-87820039 None:intergenic 35.0%
TTGAAATTTGGGTCTATTGG+TGG + chr3_3:87820021-87820040 None:intergenic 35.0%
GTGTTCAGTGATTGATCATT+CGG + chr3_3:87820066-87820085 None:intergenic 35.0%
! TTCACAATCTCCTTAGTCTT+AGG + chr3_3:87813585-87813604 None:intergenic 35.0%
AGTTCATCTGTTCGTGCAAA+TGG + chr3_3:87813270-87813289 None:intergenic 40.0%
ACCAGATAGAGCAACTACAT+CGG + chr3_3:87813328-87813347 None:intergenic 40.0%
! ATGAGCTTGACCAAAAGTGT+GGG + chr3_3:87813352-87813371 None:intergenic 40.0%
AATGAGCTTGACCAAAAGTG+TGG + chr3_3:87813353-87813372 None:intergenic 40.0%
! ATCCAAATTAACGGCGTTGA+GGG + chr3_3:87813469-87813488 None:intergenic 40.0%
CATTAACCTCTTGAATCACC+AGG - chr3_3:87813524-87813543 Msa0481570:CDS 40.0%
GTTTACATCGGATCAAGACT+TGG - chr3_3:87813551-87813570 Msa0481570:CDS 40.0%
!! CTTTCTGGTTAGAAGCAAAG+AGG + chr3_3:87813608-87813627 None:intergenic 40.0%
! GAAATCTAAGGTGGCATCTA+TGG - chr3_3:87813734-87813753 Msa0481570:intron 40.0%
ATAGACTTGTGTGCACAATG+TGG + chr3_3:87814048-87814067 None:intergenic 40.0%
TCTACCAATCTCCAACTCTT+TGG + chr3_3:87814422-87814441 None:intergenic 40.0%
TGGTTCAGAATGAGATACCA+TGG + chr3_3:87814528-87814547 None:intergenic 40.0%
ATGGGTGCCAAAAACAAGTT+TGG - chr3_3:87814675-87814694 Msa0481570:intron 40.0%
GTTTATGTTCATCAACCACC+TGG - chr3_3:87814904-87814923 Msa0481570:intron 40.0%
TCTTGATTGATGAATCCAGG+TGG + chr3_3:87814922-87814941 None:intergenic 40.0%
!!! TCATATAGAGCTTTTGGAGC+TGG + chr3_3:87814994-87815013 None:intergenic 40.0%
AAATGGTCGGTATCAGTTGT+TGG - chr3_3:87815469-87815488 Msa0481570:intron 40.0%
! TTAGATGCACTCTCTGGAAA+AGG - chr3_3:87815577-87815596 Msa0481570:intron 40.0%
! TAGATGCACTCTCTGGAAAA+GGG - chr3_3:87815578-87815597 Msa0481570:intron 40.0%
AAAAGGGGAGATGATTGATG+CGG + chr3_3:87815818-87815837 None:intergenic 40.0%
AAATCTGCAAGGAACCGAAA+AGG + chr3_3:87816085-87816104 None:intergenic 40.0%
CCGAAGATATCAAATCTGCA+AGG + chr3_3:87816096-87816115 None:intergenic 40.0%
AATTAGGACTGAGCATCAGA+CGG + chr3_3:87816136-87816155 None:intergenic 40.0%
CCATTGTATTCTCATGATGC+GGG - chr3_3:87816187-87816206 Msa0481570:intron 40.0%
CATTGTATTCTCATGATGCG+GGG - chr3_3:87816188-87816207 Msa0481570:intron 40.0%
TACTTCCTACTTCGCATCAT+GGG + chr3_3:87816221-87816240 None:intergenic 40.0%
GACATTCTGGTGAGAGAAAA+TGG + chr3_3:87816265-87816284 None:intergenic 40.0%
! GGTTACTAGTTGTCTAGTTC+AGG - chr3_3:87816340-87816359 Msa0481570:intron 40.0%
! TACTAGTTGTCTAGTTCAGG+TGG - chr3_3:87816343-87816362 Msa0481570:intron 40.0%
! CCTTTTCTCTTGCATGTTCA+TGG + chr3_3:87816373-87816392 None:intergenic 40.0%
CCATGAACATGCAAGAGAAA+AGG - chr3_3:87816370-87816389 Msa0481570:intron 40.0%
TGAACATGCAAGAGAAAAGG+AGG - chr3_3:87816373-87816392 Msa0481570:intron 40.0%
GAACATGCAAGAGAAAAGGA+GGG - chr3_3:87816374-87816393 Msa0481570:intron 40.0%
GAATGAGTCGATCGTACTTA+AGG + chr3_3:87816414-87816433 None:intergenic 40.0%
! ACGATCGACTCATTCCTTAT+TGG - chr3_3:87816419-87816438 Msa0481570:intron 40.0%
GAAACTGCTGAGAGAGAAAT+TGG - chr3_3:87816825-87816844 Msa0481570:intron 40.0%
TCAAACTTCTCCTGTTTGGT+AGG - chr3_3:87816855-87816874 Msa0481570:intron 40.0%
TATTTCTTGGCCTACCAAAC+AGG + chr3_3:87816868-87816887 None:intergenic 40.0%
GTTTGGTAGGCCAAGAAATA+AGG - chr3_3:87816868-87816887 Msa0481570:intron 40.0%
GCGAAGAAAGATAAAAGTGG+TGG + chr3_3:87816920-87816939 None:intergenic 40.0%
AAATGAGGAAAGGGTGACAA+GGG + chr3_3:87816999-87817018 None:intergenic 40.0%
AAAATGAGGAAAGGGTGACA+AGG + chr3_3:87817000-87817019 None:intergenic 40.0%
!! TTCTGGAATGCACAAGTTGA+AGG + chr3_3:87817926-87817945 None:intergenic 40.0%
! GAGATTTGGAACAACCAACT+AGG + chr3_3:87818019-87818038 None:intergenic 40.0%
! GAGCACATGCATTTGAGATT+TGG + chr3_3:87818033-87818052 None:intergenic 40.0%
AGTGGTCTCTTTGCACAATA+TGG + chr3_3:87818055-87818074 None:intergenic 40.0%
! AGGCCTTGATAATCTCTTAG+AGG + chr3_3:87818229-87818248 None:intergenic 40.0%
CAATCTAGTCCCCTCATAAT+GGG + chr3_3:87818252-87818271 None:intergenic 40.0%
! CTATTGGTTGTCATGTCCTA+AGG - chr3_3:87818278-87818297 Msa0481570:intron 40.0%
GTCATGTCCTAAGGATTGTA+AGG - chr3_3:87818287-87818306 Msa0481570:intron 40.0%
GATGGAACCTTACAATCCTT+AGG + chr3_3:87818297-87818316 None:intergenic 40.0%
GAATTGAAACAGGGATGTGA+TGG - chr3_3:87818791-87818810 Msa0481570:intron 40.0%
! TCGATTTTGTTGAACGGTGT+TGG - chr3_3:87818815-87818834 Msa0481570:intron 40.0%
TTGAATAGCCTCTTCCCTTA+AGG + chr3_3:87818876-87818895 None:intergenic 40.0%
! TAGAGCACGGAGATTTTCAA+GGG + chr3_3:87818900-87818919 None:intergenic 40.0%
! TTAGAGCACGGAGATTTTCA+AGG + chr3_3:87818901-87818920 None:intergenic 40.0%
ACTGTCTACGAATTAGAGCA+CGG + chr3_3:87818913-87818932 None:intergenic 40.0%
TAATTCGTAGACAGTGTCCA+CGG - chr3_3:87818918-87818937 Msa0481570:intron 40.0%
!! TGCCTCATTTTAAGGACACT+AGG - chr3_3:87819057-87819076 Msa0481570:intron 40.0%
CTCCTAGTGTCCTTAAAATG+AGG + chr3_3:87819062-87819081 None:intergenic 40.0%
GCATTTGTACACGAAACCTT+CGG - chr3_3:87819081-87819100 Msa0481570:intron 40.0%
CATTTGTACACGAAACCTTC+GGG - chr3_3:87819082-87819101 Msa0481570:intron 40.0%
TTGAAGAGACTAGTAGAGCT+CGG + chr3_3:87819213-87819232 None:intergenic 40.0%
! AGCTCTACTAGTCTCTTCAA+AGG - chr3_3:87819213-87819232 Msa0481570:intron 40.0%
!! ATCTTTCGTAGCACTGGTAT+TGG - chr3_3:87819393-87819412 Msa0481570:intron 40.0%
GAAGGAGTTGGAATAGTCAA+AGG - chr3_3:87819437-87819456 Msa0481570:intron 40.0%
CCAATGGTACATCAAAATCG+GGG + chr3_3:87819804-87819823 None:intergenic 40.0%
CCCAATGGTACATCAAAATC+GGG + chr3_3:87819805-87819824 None:intergenic 40.0%
!! CCCGATTTTGATGTACCATT+GGG - chr3_3:87819802-87819821 Msa0481570:CDS 40.0%
! AATGGTACTGGAAGATTGTC+TGG + chr3_3:87819862-87819881 None:intergenic 40.0%
TCCGTTCTTTCAAATGGTAC+TGG + chr3_3:87819874-87819893 None:intergenic 40.0%
!! TAGTCTTAGGATGACTTGCT+AGG + chr3_3:87820182-87820201 None:intergenic 40.0%
AGCAAGTCATCCTAAGACTA+AGG - chr3_3:87820182-87820201 Msa0481570:intron 40.0%
CCAATGGCACGTCAAAATCT+GGG + chr3_3:87813195-87813214 None:intergenic 45.0%
!! CCAGATTTTGACGTGCCATT+GGG - chr3_3:87813193-87813212 Msa0481570:CDS 45.0%
! AGGCTGTCTTTTCTTCCCAA+TGG + chr3_3:87813211-87813230 None:intergenic 45.0%
CTGTTCGTGCAAATGGTACT+GGG + chr3_3:87813263-87813282 None:intergenic 45.0%
TCTGTTCGTGCAAATGGTAC+TGG + chr3_3:87813264-87813283 None:intergenic 45.0%
ACCGATGTAGTTGCTCTATC+TGG - chr3_3:87813324-87813343 Msa0481570:CDS 45.0%
GTGGGTCGGATTCAATGATT+CGG + chr3_3:87813392-87813411 None:intergenic 45.0%
! ATTTGGTTCGATTGGTGGGT+CGG + chr3_3:87813406-87813425 None:intergenic 45.0%
CATCCAAATTAACGGCGTTG+AGG + chr3_3:87813470-87813489 None:intergenic 45.0%
TCACCAGGGTGTGTTTACAT+CGG - chr3_3:87813539-87813558 Msa0481570:CDS 45.0%
GGCAAGTCATCCTAAGACTA+AGG - chr3_3:87813572-87813591 Msa0481570:CDS 45.0%
! ATCTAAGGTGGCATCTATGG+TGG - chr3_3:87813737-87813756 Msa0481570:intron 45.0%
GAAACAACGACATCCCAACT+AGG + chr3_3:87813840-87813859 None:intergenic 45.0%
!! TTTTAGGTAAGGCAGGAGTG+TGG + chr3_3:87813877-87813896 None:intergenic 45.0%
GTTAGAACCCTCCAAAGAGT+TGG - chr3_3:87814408-87814427 Msa0481570:CDS 45.0%
CCAATCTCCAACTCTTTGGA+GGG + chr3_3:87814418-87814437 None:intergenic 45.0%
ACCAATCTCCAACTCTTTGG+AGG + chr3_3:87814419-87814438 None:intergenic 45.0%
! GCACCCATCTTGTTTGATGA+TGG + chr3_3:87814663-87814682 None:intergenic 45.0%
ACAATGCTAGACTTGGCACA+AGG - chr3_3:87814721-87814740 Msa0481570:intron 45.0%
TCATAGCCTGCATTGCAAGT+AGG - chr3_3:87815324-87815343 Msa0481570:intron 45.0%
!!! ATACGGGTTTTTCGGGTTGT+AGG + chr3_3:87815373-87815392 None:intergenic 45.0%
TGCAAACGGGTAGGTTCAAT+CGG - chr3_3:87815402-87815421 Msa0481570:intron 45.0%
GTAGGTTCAATCGGGTTTGT+CGG - chr3_3:87815411-87815430 Msa0481570:intron 45.0%
AACTGTACCTTTCACCCGAT+GGG + chr3_3:87815437-87815456 None:intergenic 45.0%
! GTGAAAGGTACAGTTCTGTG+TGG - chr3_3:87815442-87815461 Msa0481570:intron 45.0%
GATGGTTTAGATGCACTCTC+TGG - chr3_3:87815571-87815590 Msa0481570:intron 45.0%
ATTAGGACTGAGCATCAGAC+GGG + chr3_3:87816135-87816154 None:intergenic 45.0%
CCCGCATCATGAGAATACAA+TGG + chr3_3:87816190-87816209 None:intergenic 45.0%
CTACTTCCTACTTCGCATCA+TGG + chr3_3:87816222-87816241 None:intergenic 45.0%
ATGCAAGAGAAAAGGAGGGT+GGG - chr3_3:87816378-87816397 Msa0481570:intron 45.0%
CAAGTGGGTGGAAAAGCTAT+TGG + chr3_3:87816470-87816489 None:intergenic 45.0%
CAGTAATGCAAACAAGTGGG+TGG + chr3_3:87816482-87816501 None:intergenic 45.0%
CACCCACTTGTTTGCATTAC+TGG - chr3_3:87816480-87816499 Msa0481570:intron 45.0%
! AGGGTGACAAGGGTATACAA+TGG + chr3_3:87816989-87817008 None:intergenic 45.0%
CTTCTCTCTCAGGGTATGTT+TGG + chr3_3:87817668-87817687 None:intergenic 45.0%
CAAACATACCCTGAGAGAGA+AGG - chr3_3:87817666-87817685 Msa0481570:intron 45.0%
AGATGGATATTGAGGGCTAG+TGG + chr3_3:87818073-87818092 None:intergenic 45.0%
TATCAAGGCCTCCCATTATG+AGG - chr3_3:87818238-87818257 Msa0481570:intron 45.0%
ATCAAGGCCTCCCATTATGA+GGG - chr3_3:87818239-87818258 Msa0481570:intron 45.0%
CCAATCTAGTCCCCTCATAA+TGG + chr3_3:87818253-87818272 None:intergenic 45.0%
CCATTATGAGGGGACTAGAT+TGG - chr3_3:87818250-87818269 Msa0481570:intron 45.0%
AAAAAGAGCCTGAGTATGCC+AGG + chr3_3:87818355-87818374 None:intergenic 45.0%
!! TTTCCATGACTGCTTTTCCC+AGG - chr3_3:87818372-87818391 Msa0481570:intron 45.0%
TTACCTGGGAAAAGCAGTCA+TGG + chr3_3:87818378-87818397 None:intergenic 45.0%
AATTCGTAGACAGTGTCCAC+GGG - chr3_3:87818919-87818938 Msa0481570:intron 45.0%
!! CCCCGATTTTGATGTACCAT+TGG - chr3_3:87819801-87819820 Msa0481570:CDS 45.0%
GTGCAGTTGCATTGAAGGTT+AGG + chr3_3:87819840-87819859 None:intergenic 45.0%
GATCAGATGTAAACACACCC+TGG + chr3_3:87820155-87820174 None:intergenic 45.0%
!!! AAAATTATTGTTAATTTTTT+AGG + chr3_3:87813893-87813912 None:intergenic 5.0%
!! TTAAAAAAAATAAAACTATT+CGG + chr3_3:87817214-87817233 None:intergenic 5.0%
!!! AATAGTTTTATTTTTTTTAA+AGG - chr3_3:87817214-87817233 Msa0481570:intron 5.0%
!! TTATATTAAAAAAATAAAGA+TGG - chr3_3:87818683-87818702 Msa0481570:intron 5.0%
!! CCCAGATTTTGACGTGCCAT+TGG - chr3_3:87813192-87813211 Msa0481570:CDS 50.0%
CCCAATGGCACGTCAAAATC+TGG + chr3_3:87813196-87813215 None:intergenic 50.0%
! CTATCTGGTGCCCACACTTT+TGG - chr3_3:87813339-87813358 Msa0481570:CDS 50.0%
CGAAGCAACATGTCCGAATG+AGG - chr3_3:87813440-87813459 Msa0481570:CDS 50.0%
GTCCCTCAACGCCGTTAATT+TGG - chr3_3:87813464-87813483 Msa0481570:CDS 50.0%
ACACACCCTGGTGATTCAAG+AGG + chr3_3:87813533-87813552 None:intergenic 50.0%
GATCCGATGTAAACACACCC+TGG + chr3_3:87813545-87813564 None:intergenic 50.0%
! ATCTATGGTGGAAGAGGTGG+TGG - chr3_3:87813749-87813768 Msa0481570:intron 50.0%
CAACGACATCCCAACTAGGT+TGG + chr3_3:87813836-87813855 None:intergenic 50.0%
CCCTCCAAAGAGTTGGAGAT+TGG - chr3_3:87814415-87814434 Msa0481570:CDS 50.0%
CATCGCGAGATAGAGCGATA+AGG + chr3_3:87815298-87815317 None:intergenic 50.0%
TATCGCTCTATCTCGCGATG+TGG - chr3_3:87815298-87815317 Msa0481570:intron 50.0%
ATCGCTCTATCTCGCGATGT+GGG - chr3_3:87815299-87815318 Msa0481570:intron 50.0%
CTCAGTCCTACTTGCAATGC+AGG + chr3_3:87815333-87815352 None:intergenic 50.0%
GCAAACGGGTAGGTTCAATC+GGG - chr3_3:87815403-87815422 Msa0481570:intron 50.0%
GAACTGTACCTTTCACCCGA+TGG + chr3_3:87815438-87815457 None:intergenic 50.0%
TCTAACGGTGCTTGTTCGGT+CGG + chr3_3:87815520-87815539 None:intergenic 50.0%
CATAGCCCATGATGCGAAGT+AGG - chr3_3:87816213-87816232 Msa0481570:intron 50.0%
! GTAGGAAGTAGCTGACTCCT+TGG - chr3_3:87816231-87816250 Msa0481570:intron 50.0%
CATGCAAGAGAAAAGGAGGG+TGG - chr3_3:87816377-87816396 Msa0481570:intron 50.0%
TGCGAAGAGATCCAGGAGAA+AGG - chr3_3:87816945-87816964 Msa0481570:intron 50.0%
GAGAACACAATGTCACCACG+AGG + chr3_3:87817882-87817901 None:intergenic 50.0%
TCAAGGCCTCCCATTATGAG+GGG - chr3_3:87818240-87818259 Msa0481570:intron 50.0%
! TCTAGTCCCCTCATAATGGG+AGG + chr3_3:87818249-87818268 None:intergenic 50.0%
! AAAGATAGTGGCCAAGCTCC+TGG - chr3_3:87818334-87818353 Msa0481570:intron 50.0%
ATCCTGCCAACTTCGCCTTA+AGG - chr3_3:87818858-87818877 Msa0481570:intron 50.0%
TCCTGCCAACTTCGCCTTAA+GGG - chr3_3:87818859-87818878 Msa0481570:intron 50.0%
CTCTTCCCTTAAGGCGAAGT+TGG + chr3_3:87818867-87818886 None:intergenic 50.0%
CAACTTCGCCTTAAGGGAAG+AGG - chr3_3:87818865-87818884 Msa0481570:intron 50.0%
AGGCTGTCTCTTCTTCCCAA+TGG + chr3_3:87819820-87819839 None:intergenic 50.0%
GTCTGGTGCAGTTGCATTGA+AGG + chr3_3:87819845-87819864 None:intergenic 50.0%
GCGTTGAGGGACTCCTCATT+CGG + chr3_3:87813456-87813475 None:intergenic 55.0%
! GGTGGCATCTATGGTGGAAG+AGG - chr3_3:87813743-87813762 Msa0481570:intron 55.0%
! GGCATCTATGGTGGAAGAGG+TGG - chr3_3:87813746-87813765 Msa0481570:intron 55.0%
TCGCTCTATCTCGCGATGTG+GGG - chr3_3:87815300-87815319 Msa0481570:intron 55.0%
!! TTTCGGGTTGTAGGCGGGTT+CGG + chr3_3:87815364-87815383 None:intergenic 55.0%
!!! GGGTTTTTCGGGTTGTAGGC+GGG + chr3_3:87815369-87815388 None:intergenic 55.0%
!!! CGGGTTTTTCGGGTTGTAGG+CGG + chr3_3:87815370-87815389 None:intergenic 55.0%
AATCGGGTTTGTCGGCCCAT+CGG - chr3_3:87815419-87815438 Msa0481570:intron 55.0%
CTAACGGTGCTTGTTCGGTC+GGG + chr3_3:87815519-87815538 None:intergenic 55.0%
ACGATTTGAGCGGGCGGTTT+GGG + chr3_3:87815996-87816015 None:intergenic 55.0%
!! GCGTCGGATTAGTCGGATGA+CGG + chr3_3:87816031-87816050 None:intergenic 55.0%
!! GTGTGAGGCGTCGGATTAGT+CGG + chr3_3:87816038-87816057 None:intergenic 55.0%
GACTAATCCGACGCCTCACA+CGG - chr3_3:87816037-87816056 Msa0481570:intron 55.0%
! ACTGAGCATCAGACGGGTTC+GGG + chr3_3:87816129-87816148 None:intergenic 55.0%
! GACTGAGCATCAGACGGGTT+CGG + chr3_3:87816130-87816149 None:intergenic 55.0%
GCTGATGTGCGAAGAGATCC+AGG - chr3_3:87816938-87816957 Msa0481570:intron 55.0%
TGCACGTTATGGAAGCCTCG+TGG - chr3_3:87817864-87817883 Msa0481570:intron 55.0%
TCCCTTAAGGCGAAGTTGGC+AGG + chr3_3:87818863-87818882 None:intergenic 55.0%
!!! CTTTCTGGGGCGCACACTTT+TGG - chr3_3:87819949-87819968 Msa0481570:CDS 55.0%
! TCACGGGGTGCCAACCTAGT+TGG - chr3_3:87813823-87813842 Msa0481570:intron 60.0%
! CACGGGGTGCCAACCTAGTT+GGG - chr3_3:87813824-87813843 Msa0481570:intron 60.0%
ATCGGGTTTGTCGGCCCATC+GGG - chr3_3:87815420-87815439 Msa0481570:intron 60.0%
TTGTCGGCCCATCGGGTGAA+AGG - chr3_3:87815427-87815446 Msa0481570:intron 60.0%
GGTGCTTGTTCGGTCGGGTA+CGG + chr3_3:87815514-87815533 None:intergenic 60.0%
! TTTGAGCGGGCGGTTTGGGT+CGG + chr3_3:87815992-87816011 None:intergenic 60.0%
GACGATTTGAGCGGGCGGTT+TGG + chr3_3:87815997-87816016 None:intergenic 60.0%
! AGTCGGATGACGGTTTGCGC+CGG + chr3_3:87816021-87816040 None:intergenic 60.0%
AATCCGACGCCTCACACGGT+CGG - chr3_3:87816041-87816060 Msa0481570:intron 60.0%
CAACCATCTCCGACCGTGTG+AGG + chr3_3:87816053-87816072 None:intergenic 60.0%
GCCAAGCTCCTGGCATACTC+AGG - chr3_3:87818344-87818363 Msa0481570:intron 60.0%
GCCTGAGTATGCCAGGAGCT+TGG + chr3_3:87818348-87818367 None:intergenic 60.0%
! TCCACGGGTTGTCTCGTGTG+CGG - chr3_3:87818934-87818953 Msa0481570:intron 60.0%
TGCGGACATACTCGTCCTCG+CGG - chr3_3:87818952-87818971 Msa0481570:intron 60.0%
GGCACGAGAAGCTGTTCGTC+AGG - chr3_3:87818973-87818992 Msa0481570:intron 60.0%
! TGCGCCGGCGACGATTTGAG+CGG + chr3_3:87816006-87816025 None:intergenic 65.0%
TCTCCGACCGTGTGAGGCGT+CGG + chr3_3:87816047-87816066 None:intergenic 65.0%
ACGCCTCACACGGTCGGAGA+TGG - chr3_3:87816047-87816066 Msa0481570:intron 65.0%
! AGCATCAGACGGGTTCGGGC+GGG + chr3_3:87816125-87816144 None:intergenic 65.0%
! GAGCATCAGACGGGTTCGGG+CGG + chr3_3:87816126-87816145 None:intergenic 65.0%
TCCGCACACGAGACAACCCG+TGG + chr3_3:87818938-87818957 None:intergenic 65.0%
GAACAGCTTCTCGTGCCGCG+AGG + chr3_3:87818970-87818989 None:intergenic 65.0%
CCGGCGACGATTTGAGCGGG+CGG + chr3_3:87816002-87816021 None:intergenic 70.0%
CCGCCCGCTCAAATCGTCGC+CGG - chr3_3:87815999-87816018 Msa0481570:intron 70.0%
! GCGCCGGCGACGATTTGAGC+GGG + chr3_3:87816005-87816024 None:intergenic 70.0%
! CAGACGGGTTCGGGCGGGAT+CGG + chr3_3:87816120-87816139 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 87813159 87820233 87813159 ID=Msa0481570;Name=Msa0481570
chr3_3 mRNA 87813159 87820233 87813159 ID=Msa0481570-mRNA-1;Parent=Msa0481570;Name=Msa0481570-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|6|0|406
chr3_3 exon 87820220 87820233 87820220 ID=Msa0481570-mRNA-1:exon:25513;Parent=Msa0481570-mRNA-1
chr3_3 exon 87819904 87820141 87819904 ID=Msa0481570-mRNA-1:exon:25512;Parent=Msa0481570-mRNA-1
chr3_3 exon 87819605 87819846 87819605 ID=Msa0481570-mRNA-1:exon:25511;Parent=Msa0481570-mRNA-1
chr3_3 exon 87814999 87815092 87814999 ID=Msa0481570-mRNA-1:exon:25510;Parent=Msa0481570-mRNA-1
chr3_3 exon 87814398 87814589 87814398 ID=Msa0481570-mRNA-1:exon:25509;Parent=Msa0481570-mRNA-1
chr3_3 exon 87813159 87813599 87813159 ID=Msa0481570-mRNA-1:exon:25508;Parent=Msa0481570-mRNA-1
chr3_3 CDS 87820220 87820233 87820220 ID=Msa0481570-mRNA-1:cds;Parent=Msa0481570-mRNA-1
chr3_3 CDS 87819904 87820141 87819904 ID=Msa0481570-mRNA-1:cds;Parent=Msa0481570-mRNA-1
chr3_3 CDS 87819605 87819846 87819605 ID=Msa0481570-mRNA-1:cds;Parent=Msa0481570-mRNA-1
chr3_3 CDS 87814999 87815092 87814999 ID=Msa0481570-mRNA-1:cds;Parent=Msa0481570-mRNA-1
chr3_3 CDS 87814398 87814589 87814398 ID=Msa0481570-mRNA-1:cds;Parent=Msa0481570-mRNA-1
chr3_3 CDS 87813159 87813599 87813159 ID=Msa0481570-mRNA-1:cds;Parent=Msa0481570-mRNA-1
Gene Sequence

>Msa0481570

ATGTCCTTTATTGCAGATAATCTCCCAGTACCATTTGCACGAACAGATGAACTATTAACCGTTTTCGGATCAAAAAAATTCGATGCAACCGATGTAGTTGCTCTATCTGGTGCCCACACTTTTGGTCAAGCTCATTGTCCAACAATGTTCAACCGAATCATTGAATCCGACCCACCAATCGAACCAAATTTCAAGAAACAACTCGAAGCAACATGTCCGAATGAGGAGTCCCTCAACGCCGTTAATTTGGATGGTGTGTTTACATCGGATCAAGACTTGGCAAGTCATCCTAAGACTAAGGAGATTGTGAACCTCTTTGCTTCTAACCAGAAAGAGTTTTTTAACAAATTTGCTAATGCTTTTGTTAAGGTTAGTCAATTGGATGTTTTGACTGGAAATCAAGGAGAAATTCGTAAGTCATGTTTTGCTCCAAATAATAGGAAATCTAAGGTGGCATCTATGGTGGAAGAGGTGGTGGAAATTGCAGCAAACATGATTGTAAGGTTCCATCTTGAAGATGTGTTTGAAAAAGATAGTGGCCAAGCTCCTGGCATACTCAGGCTCTTTTTCCATGACTGCTTTTCCCAGGGATGTGATGGATCGATTTTGTTGAACGGTGTTGGAGAAGATGACGAAAAACAACATCCTGCCAACTTCGCCTTAAGGGAAGAGGCTATTCAAACCCTTGAAAATCTCCGTGCTCTAATTCGTAGACAGTGTCCACGGGTTGTCTCGTGTGCGGACATACTCGTCCTCGCGGCACGAGAAGCTGTTCGTCAGCTTGGAGGCCCCGATTTTGATGTACCATTGGGAAGAAGAGACAGCCTAACCTTCAATGCAACTGCACCAGACAATCTTCCAGTACCATTTGAAAGAACGGATGAACAATTAAGACTTTTTCAATCCAGAAAATTTGATGCCACATATTTAGTTGCTCTTTCTGGGGCGCACACTTTTGGTCGATCCCATTGTCCTACACTATTCAATCGAACCATTGATACAAACCCACCAATAGACCCAAATTTCAAGAAACAACTCGAAGCGACATGTCCGAATGATCAATCACTGAACACAATTAACTTGGATATTAGAACACCAACGAAATTCGATAACATGTACTATATTAATCTCTTGAATCACCAGGGTGTGTTTACATCTGATCAAGACCTAGCAAGTCATCCTAAGACTAAGGAGATTGTGAACCTCTTTGCTTCTAACTAG
Protein sequence

>Msa0481570

MSFIADNLPVPFARTDELLTVFGSKKFDATDVVALSGAHTFGQAHCPTMFNRIIESDPPIEPNFKKQLEATCPNEESLNAVNLDGVFTSDQDLASHPKTKEIVNLFASNQKEFFNKFANAFVKVSQLDVLTGNQGEIRKSCFAPNNRKSKVASMVEEVVEIAANMIVRFHLEDVFEKDSGQAPGILRLFFHDCFSQGCDGSILLNGVGEDDEKQHPANFALREEAIQTLENLRALIRRQCPRVVSCADILVLAAREAVRQLGGPDFDVPLGRRDSLTFNATAPDNLPVPFERTDEQLRLFQSRKFDATYLVALSGAHTFGRSHCPTLFNRTIDTNPPIDPNFKKQLEATCPNDQSLNTINLDIRTPTKFDNMYYINLLNHQGVFTSDQDLASHPKTKEIVNLFASN*