AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0482790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0482790 MtrunA17_Chr6g0467251 83.058 242 40 1 207 447 51 292 1.84e-150 431
Msa0482790 MtrunA17_Chr6g0467251 86.139 202 9 1 24 206 147 348 4.52e-110 328
Msa0482790 MtrunA17_Chr6g0467161 54.772 241 109 0 207 447 60 300 2.27e-93 285
Msa0482790 MtrunA17_Chr6g0467161 47.368 190 79 2 20 188 149 338 4.05e-49 171
Msa0482790 MtrunA17_Chr6g0467121 56.017 241 104 1 207 447 89 327 2.30e-93 287
Msa0482790 MtrunA17_Chr6g0467121 50.761 197 77 2 26 202 184 380 1.57e-55 189
Msa0482790 MtrunA17_Chr2g0279041 41.532 248 134 5 204 444 39 282 1.23e-53 182
Msa0482790 MtrunA17_Chr2g0279041 31.795 195 103 4 22 186 131 325 2.40e-19 88.6
Msa0482790 MtrunA17_Chr2g0292241 41.897 253 133 6 207 447 44 294 3.88e-52 179
Msa0482790 MtrunA17_Chr2g0292241 40.415 193 86 5 19 182 134 326 3.53e-35 134
Msa0482790 MtrunA17_Chr2g0292091 43.590 234 118 6 226 447 58 289 8.95e-52 177
Msa0482790 MtrunA17_Chr2g0292091 37.306 193 92 5 19 182 129 321 1.50e-28 115
Msa0482790 MtrunA17_Chr5g0405991 39.357 249 141 4 207 447 38 284 1.26e-51 176
Msa0482790 MtrunA17_Chr5g0405991 34.426 183 90 5 26 182 134 312 7.65e-25 104
Msa0482790 MtrunA17_Chr4g0013191 43.265 245 132 5 208 447 62 304 7.07e-51 175
Msa0482790 MtrunA17_Chr4g0013191 39.130 184 88 5 22 182 154 336 2.07e-26 109
Msa0482790 MtrunA17_Chr2g0292151 42.688 253 131 6 207 447 44 294 1.25e-49 172
Msa0482790 MtrunA17_Chr2g0292151 36.916 214 104 6 19 201 134 347 4.24e-32 125
Msa0482790 MtrunA17_Chr1g0194151 39.759 249 134 8 207 441 45 291 2.05e-49 171
Msa0482790 MtrunA17_Chr1g0194151 33.511 188 96 5 28 186 146 333 8.36e-21 93.2
Msa0482790 MtrunA17_Chr2g0292211 40.316 253 137 6 207 447 55 305 3.64e-49 171
Msa0482790 MtrunA17_Chr2g0292211 38.249 217 100 6 19 201 145 361 2.46e-33 129
Msa0482790 MtrunA17_Chr4g0053871 41.600 250 134 7 207 447 42 288 5.82e-49 169
Msa0482790 MtrunA17_Chr4g0053871 34.078 179 96 4 26 182 142 320 5.54e-21 93.6
Msa0482790 MtrunA17_Chr4g0013201 41.296 247 140 4 204 447 58 302 6.02e-49 170
Msa0482790 MtrunA17_Chr4g0013201 38.764 178 87 4 26 182 158 334 1.09e-25 107
Msa0482790 MtrunA17_Chr1g0197411 38.189 254 138 7 207 445 43 292 6.65e-49 170
Msa0482790 MtrunA17_Chr1g0197411 36.216 185 90 4 26 182 142 326 3.73e-24 102
Msa0482790 MtrunA17_Chr4g0076211 41.102 236 127 4 217 446 66 295 6.89e-49 170
Msa0482790 MtrunA17_Chr4g0076211 30.851 188 102 4 21 182 144 329 1.01e-17 84.0
Msa0482790 MtrunA17_Chr2g0296621 36.437 247 145 4 207 447 65 305 7.27e-49 170
Msa0482790 MtrunA17_Chr2g0296621 31.492 181 99 7 26 182 158 337 1.93e-16 80.5
Msa0482790 MtrunA17_Chr1g0188431 38.618 246 138 4 207 447 54 291 7.31e-49 169
Msa0482790 MtrunA17_Chr1g0188431 39.080 174 89 2 26 182 150 323 1.49e-31 123
Msa0482790 MtrunA17_Chr2g0292251 40.316 253 137 6 207 447 43 293 9.36e-49 170
Msa0482790 MtrunA17_Chr2g0292251 35.294 221 109 7 21 207 135 355 4.59e-31 122
Msa0482790 MtrunA17_Chr8g0371381 40.693 231 127 4 225 447 59 287 1.25e-48 169
Msa0482790 MtrunA17_Chr8g0371381 34.031 191 94 6 20 182 129 315 1.62e-23 100
Msa0482790 MtrunA17_Chr2g0292101 41.880 234 122 6 226 447 59 290 1.29e-48 169
Msa0482790 MtrunA17_Chr2g0292101 35.294 204 103 4 19 193 130 333 3.84e-29 117
Msa0482790 MtrunA17_Chr1g0148021 38.247 251 145 4 207 447 42 292 2.69e-48 168
Msa0482790 MtrunA17_Chr1g0148021 32.609 184 97 4 26 182 141 324 8.26e-23 98.6
Msa0482790 MtrunA17_Chr4g0063671 39.044 251 142 4 204 447 33 279 3.37e-48 167
Msa0482790 MtrunA17_Chr4g0063671 32.275 189 97 4 25 182 128 316 2.98e-18 85.5
Msa0482790 MtrunA17_Chr7g0225221 39.224 232 135 4 220 447 55 284 9.62e-48 166
Msa0482790 MtrunA17_Chr7g0225221 34.973 183 96 3 23 182 134 316 2.52e-25 105
Msa0482790 MtrunA17_Chr1g0157051 39.738 229 128 4 225 445 57 283 1.48e-47 166
Msa0482790 MtrunA17_Chr1g0157051 31.148 183 97 4 26 182 135 314 6.37e-20 90.1
Msa0482790 MtrunA17_Chr1g0164891 36.719 256 140 7 203 441 100 350 2.25e-47 167
Msa0482790 MtrunA17_Chr1g0164891 33.880 183 93 3 28 182 206 388 5.91e-24 103
Msa0482790 MtrunA17_Chr1g0175561 39.370 254 139 7 207 447 39 290 2.58e-47 165
Msa0482790 MtrunA17_Chr1g0175561 36.170 188 87 6 26 182 137 322 5.37e-24 102
Msa0482790 MtrunA17_Chr2g0320091 39.516 248 138 6 207 447 40 282 5.65e-47 164
Msa0482790 MtrunA17_Chr2g0320091 32.240 183 101 3 22 182 133 314 6.50e-21 93.2
Msa0482790 MtrunA17_Chr4g0072091 41.270 252 134 7 207 447 39 287 7.12e-47 164
Msa0482790 MtrunA17_Chr4g0072091 37.234 188 91 4 26 186 136 323 6.79e-25 104
Msa0482790 MtrunA17_Chr5g0438021 36.066 244 147 5 208 445 47 287 1.15e-46 164
Msa0482790 MtrunA17_Chr5g0438021 32.620 187 102 3 23 186 140 325 3.20e-22 97.1
Msa0482790 MtrunA17_Chr4g0046131 38.115 244 139 4 216 447 66 309 1.70e-46 164
Msa0482790 MtrunA17_Chr4g0046131 34.409 186 93 4 26 182 157 342 1.38e-23 101
Msa0482790 MtrunA17_Chr2g0291751 42.188 256 132 8 205 447 42 294 1.76e-46 164
Msa0482790 MtrunA17_Chr2g0291751 37.931 203 97 5 19 192 134 336 2.70e-32 125
Msa0482790 MtrunA17_Chr2g0320101 37.860 243 148 3 207 447 40 281 2.67e-46 162
Msa0482790 MtrunA17_Chr2g0320101 34.254 181 97 3 23 182 134 313 2.13e-22 97.4
Msa0482790 MtrunA17_Chr2g0320071 37.860 243 148 3 207 447 40 281 6.17e-46 161
Msa0482790 MtrunA17_Chr2g0320071 34.807 181 96 3 23 182 134 313 8.75e-24 101
Msa0482790 MtrunA17_Chr3g0114451 37.860 243 148 3 207 447 41 282 6.87e-46 161
Msa0482790 MtrunA17_Chr3g0114451 34.270 178 95 4 26 182 138 314 1.16e-22 98.2
Msa0482790 MtrunA17_Chr5g0404721 39.241 237 128 7 207 431 45 277 8.03e-46 161
Msa0482790 MtrunA17_Chr5g0404721 31.959 194 104 4 22 187 138 331 3.35e-23 100
Msa0482790 MtrunA17_Chr5g0401431 38.492 252 144 5 207 447 42 293 8.46e-46 161
Msa0482790 MtrunA17_Chr5g0401431 32.609 184 97 4 26 182 142 325 2.79e-19 88.6
Msa0482790 MtrunA17_Chr5g0402581 37.849 251 144 4 205 445 40 288 1.21e-45 161
Msa0482790 MtrunA17_Chr5g0402581 32.812 192 100 3 20 182 131 322 6.39e-24 102
Msa0482790 MtrunA17_Chr8g0364291 35.317 252 151 5 207 447 38 288 1.49e-45 160
Msa0482790 MtrunA17_Chr8g0364291 33.684 190 98 5 26 187 136 325 1.76e-24 103
Msa0482790 MtrunA17_Chr7g0254231 36.992 246 149 4 204 447 34 275 2.23e-45 160
Msa0482790 MtrunA17_Chr7g0254231 37.222 180 93 2 22 182 129 307 2.65e-27 111
Msa0482790 MtrunA17_Chr3g0106921 37.121 264 144 6 191 447 36 284 2.40e-45 160
Msa0482790 MtrunA17_Chr3g0106921 33.514 185 98 4 22 182 133 316 1.28e-20 92.4
Msa0482790 MtrunA17_Chr4g0013171 38.589 241 143 4 208 444 43 282 2.79e-45 160
Msa0482790 MtrunA17_Chr4g0013171 32.620 187 103 3 22 186 136 321 6.37e-23 99.0
Msa0482790 MtrunA17_Chr2g0292181 37.945 253 143 6 207 447 53 303 3.10e-45 161
Msa0482790 MtrunA17_Chr2g0292181 35.751 193 95 5 19 182 143 335 1.27e-28 115
Msa0482790 MtrunA17_Chr2g0292291 41.339 254 134 6 207 447 45 296 4.10e-45 160
Msa0482790 MtrunA17_Chr2g0292291 38.660 194 89 5 19 182 135 328 2.08e-28 115
Msa0482790 MtrunA17_Chr3g0129051 37.652 247 145 5 207 447 43 286 5.57e-45 159
Msa0482790 MtrunA17_Chr3g0129051 34.225 187 99 3 23 186 137 322 5.38e-23 99.4
Msa0482790 MtrunA17_Chr8g0372601 37.647 255 142 8 204 445 42 292 6.09e-45 159
Msa0482790 MtrunA17_Chr8g0372601 29.101 189 106 4 22 182 138 326 1.23e-20 92.4
Msa0482790 MtrunA17_Chr2g0292261 40.239 251 140 4 207 447 44 294 6.47e-45 160
Msa0482790 MtrunA17_Chr2g0292261 35.377 212 108 5 19 201 134 345 1.47e-27 112
Msa0482790 MtrunA17_Chr1g0194271 37.308 260 140 8 203 441 41 298 1.13e-44 159
Msa0482790 MtrunA17_Chr1g0194271 32.308 195 96 4 28 186 146 340 4.88e-18 85.1
Msa0482790 MtrunA17_Chr5g0402571 37.450 251 145 4 205 445 40 288 1.27e-44 158
Msa0482790 MtrunA17_Chr5g0402571 31.633 196 105 3 20 186 131 326 6.30e-22 96.3
Msa0482790 MtrunA17_Chr4g0068621 37.255 255 145 7 204 447 50 300 1.31e-44 158
Msa0482790 MtrunA17_Chr4g0068621 30.481 187 104 4 22 182 146 332 3.02e-20 91.7
Msa0482790 MtrunA17_Chr6g0477071 35.802 243 149 4 207 447 69 306 1.46e-44 159
Msa0482790 MtrunA17_Chr6g0477071 36.782 174 93 2 26 182 165 338 1.37e-26 109
Msa0482790 MtrunA17_Chr2g0292271 39.921 253 138 7 207 447 44 294 1.97e-44 158
Msa0482790 MtrunA17_Chr2g0292271 36.139 202 100 5 26 198 141 342 3.70e-27 111
Msa0482790 MtrunA17_Chr2g0292111 39.919 248 135 6 212 447 49 294 2.29e-44 158
Msa0482790 MtrunA17_Chr2g0292111 35.160 219 112 6 19 207 134 352 8.70e-31 121
Msa0482790 MtrunA17_Chr5g0432441 37.826 230 132 5 226 447 64 290 4.68e-44 157
Msa0482790 MtrunA17_Chr5g0432441 32.796 186 99 3 26 186 142 326 2.22e-21 94.7
Msa0482790 MtrunA17_Chr4g0075241 36.290 248 147 5 207 445 44 289 7.20e-44 156
Msa0482790 MtrunA17_Chr4g0075241 33.333 183 96 3 26 182 141 323 1.34e-23 100
Msa0482790 MtrunA17_Chr4g0013821 37.008 254 147 7 204 447 40 290 7.63e-44 157
Msa0482790 MtrunA17_Chr4g0013821 33.333 195 102 5 26 194 140 332 1.49e-23 101
Msa0482790 MtrunA17_Chr7g0258811 38.976 254 140 7 207 447 84 335 9.47e-44 157
Msa0482790 MtrunA17_Chr7g0258811 33.511 188 92 7 26 182 182 367 5.47e-19 88.2
Msa0482790 MtrunA17_Chr3g0128061 36.328 256 148 7 204 447 38 290 1.54e-43 155
Msa0482790 MtrunA17_Chr3g0128061 33.158 190 99 4 26 187 138 327 2.13e-22 97.4
Msa0482790 MtrunA17_Chr4g0013721 37.302 252 145 7 204 445 112 360 1.86e-43 157
Msa0482790 MtrunA17_Chr4g0013721 33.333 189 98 5 26 188 212 398 4.97e-24 103
Msa0482790 MtrunA17_Chr7g0244461 36.626 243 149 5 208 447 36 276 7.93e-43 153
Msa0482790 MtrunA17_Chr7g0244461 34.615 182 97 3 22 182 128 308 2.89e-23 99.8
Msa0482790 MtrunA17_Chr1g0204011 39.565 230 125 6 226 445 61 286 9.80e-43 153
Msa0482790 MtrunA17_Chr1g0204011 29.508 183 101 3 26 182 138 318 9.51e-18 84.0
Msa0482790 MtrunA17_Chr1g0181431 33.068 251 159 5 204 447 39 287 1.77e-42 152
Msa0482790 MtrunA17_Chr1g0181431 29.121 182 104 3 26 182 138 319 2.00e-16 80.1
Msa0482790 MtrunA17_Chr2g0320031 37.885 227 138 3 207 431 41 266 2.20e-42 152
Msa0482790 MtrunA17_Chr2g0320031 30.769 182 103 5 23 182 135 315 3.16e-16 79.3
Msa0482790 MtrunA17_Chr4g0038151 35.743 249 147 5 208 447 41 285 2.36e-42 152
Msa0482790 MtrunA17_Chr4g0038151 32.432 185 101 3 26 186 137 321 9.80e-19 86.7
Msa0482790 MtrunA17_Chr2g0322861 36.797 231 135 5 223 444 118 346 4.21e-42 153
Msa0482790 MtrunA17_Chr2g0322861 32.984 191 99 6 26 187 197 387 9.06e-21 93.6
Msa0482790 MtrunA17_Chr4g0024121 36.948 249 143 7 204 441 39 284 6.16e-42 151
Msa0482790 MtrunA17_Chr4g0024121 30.811 185 100 5 26 182 138 322 1.16e-20 92.4
Msa0482790 MtrunA17_Chr4g0038161 36.145 249 146 5 208 447 40 284 1.55e-41 150
Msa0482790 MtrunA17_Chr4g0038161 33.514 185 99 3 26 186 136 320 3.14e-19 88.2
Msa0482790 MtrunA17_Chr7g0244451 38.938 226 131 5 226 447 58 280 2.52e-41 149
Msa0482790 MtrunA17_Chr7g0244451 33.333 186 102 3 22 186 132 316 1.52e-19 89.0
Msa0482790 MtrunA17_Chr2g0299691 37.008 254 145 6 207 447 71 322 3.55e-41 150
Msa0482790 MtrunA17_Chr2g0299691 32.474 194 99 4 26 187 166 359 4.85e-21 94.0
Msa0482790 MtrunA17_Chr5g0421411 36.287 237 139 4 223 447 12 248 7.40e-41 147
Msa0482790 MtrunA17_Chr5g0421411 30.570 193 102 7 22 182 89 281 3.74e-16 78.6
Msa0482790 MtrunA17_Chr7g0224371 37.727 220 135 2 223 441 62 280 8.37e-41 148
Msa0482790 MtrunA17_Chr7g0224371 32.597 181 101 5 22 182 139 318 7.53e-22 95.9
Msa0482790 MtrunA17_Chr2g0279061 40.465 215 117 5 237 444 13 223 1.04e-40 146
Msa0482790 MtrunA17_Chr2g0279061 30.769 195 105 4 22 186 72 266 1.61e-17 82.4
Msa0482790 MtrunA17_Chr3g0129061 36.585 246 147 5 208 447 44 286 1.63e-40 147
Msa0482790 MtrunA17_Chr3g0129061 32.620 187 102 3 23 186 137 322 1.03e-23 101
Msa0482790 MtrunA17_Chr5g0400331 35.385 260 150 7 204 447 38 295 1.66e-40 147
Msa0482790 MtrunA17_Chr5g0400331 32.461 191 94 5 26 182 138 327 1.86e-22 97.8
Msa0482790 MtrunA17_Chr1g0181481 32.669 251 160 5 204 447 39 287 2.32e-40 147
Msa0482790 MtrunA17_Chr1g0181481 27.568 185 109 3 23 182 135 319 4.83e-15 75.9
Msa0482790 MtrunA17_Chr1g0213061 36.681 229 137 4 208 431 43 268 2.49e-40 147
Msa0482790 MtrunA17_Chr1g0213061 33.889 180 95 3 26 182 139 317 4.75e-21 93.6
Msa0482790 MtrunA17_Chr4g0070951 38.723 235 134 6 207 433 43 275 2.97e-40 147
Msa0482790 MtrunA17_Chr4g0070951 30.457 197 106 4 22 187 134 330 5.94e-18 84.7
Msa0482790 MtrunA17_Chr2g0320051 36.564 227 141 3 207 431 40 265 3.40e-40 146
Msa0482790 MtrunA17_Chr2g0320051 33.516 182 98 5 23 182 134 314 6.17e-18 84.3
Msa0482790 MtrunA17_Chr7g0268501 36.087 230 134 6 226 446 59 284 1.14e-39 145
Msa0482790 MtrunA17_Chr7g0268501 31.551 187 100 5 27 186 135 320 7.91e-23 98.6
Msa0482790 MtrunA17_Chr7g0268521 36.087 230 134 6 226 446 59 284 1.14e-39 145
Msa0482790 MtrunA17_Chr7g0268521 31.551 187 100 5 27 186 135 320 7.91e-23 98.6
Msa0482790 MtrunA17_Chr4g0038171 35.200 250 148 6 208 447 40 285 3.21e-39 144
Msa0482790 MtrunA17_Chr4g0038171 33.862 189 94 6 26 186 136 321 1.78e-16 80.1
Msa0482790 MtrunA17_Chr1g0181511 32.540 252 159 6 204 447 39 287 3.67e-39 144
Msa0482790 MtrunA17_Chr1g0181511 28.108 185 108 3 23 182 135 319 2.00e-16 80.1
Msa0482790 MtrunA17_Chr6g0460711 35.200 250 144 6 207 446 36 277 4.18e-39 143
Msa0482790 MtrunA17_Chr6g0460711 34.946 186 93 5 26 186 132 314 5.19e-20 90.5
Msa0482790 MtrunA17_Chr3g0136751 39.407 236 126 8 224 447 56 286 5.36e-39 143
Msa0482790 MtrunA17_Chr3g0136751 33.679 193 99 4 23 186 130 322 5.15e-19 87.8
Msa0482790 MtrunA17_Chr2g0320061 35.242 227 144 3 207 431 40 265 6.49e-39 143
Msa0482790 MtrunA17_Chr2g0320061 32.967 182 99 5 23 182 134 314 3.69e-19 88.2
Msa0482790 MtrunA17_Chr4g0013181 37.069 232 141 4 217 444 84 314 2.35e-38 142
Msa0482790 MtrunA17_Chr4g0013181 31.551 187 105 4 22 186 168 353 2.58e-20 92.0
Msa0482790 MtrunA17_Chr1g0155611 37.647 255 141 8 204 444 58 308 3.63e-38 141
Msa0482790 MtrunA17_Chr1g0155611 31.579 190 101 5 22 182 154 343 4.42e-20 91.3
Msa0482790 MtrunA17_Chr4g0043391 34.800 250 149 6 208 447 43 288 3.74e-38 141
Msa0482790 MtrunA17_Chr4g0043391 33.862 189 94 6 26 186 139 324 2.04e-16 80.1
Msa0482790 MtrunA17_Chr3g0129041 36.214 243 146 5 208 444 44 283 4.35e-38 140
Msa0482790 MtrunA17_Chr3g0129041 31.551 187 104 3 23 186 137 322 1.73e-18 86.3
Msa0482790 MtrunA17_Chr6g0451571 36.325 234 140 5 223 447 65 298 7.19e-38 140
Msa0482790 MtrunA17_Chr6g0451571 33.690 187 98 5 22 182 144 330 6.73e-20 90.5
Msa0482790 MtrunA17_Chr3g0106901 37.551 245 146 6 207 447 46 287 2.82e-37 138
Msa0482790 MtrunA17_Chr3g0106901 35.393 178 93 4 26 182 143 319 1.30e-23 100
Msa0482790 MtrunA17_Chr2g0329641 33.594 256 154 6 204 447 48 299 2.87e-37 139
Msa0482790 MtrunA17_Chr2g0329641 33.155 187 93 4 27 182 146 331 1.27e-20 92.4
Msa0482790 MtrunA17_Chr2g0316481 34.155 284 145 7 204 447 88 369 1.06e-36 139
Msa0482790 MtrunA17_Chr4g0074851 32.549 255 155 6 204 447 44 292 1.61e-36 137
Msa0482790 MtrunA17_Chr4g0074851 29.255 188 108 3 26 188 143 330 1.74e-16 80.5
Msa0482790 MtrunA17_Chr5g0432351 36.111 252 144 9 207 447 40 285 2.39e-36 136
Msa0482790 MtrunA17_Chr5g0432351 32.955 176 95 5 29 182 143 317 1.66e-17 83.2
Msa0482790 MtrunA17_Chr7g0254201 34.137 249 155 5 204 447 32 276 1.08e-35 134
Msa0482790 MtrunA17_Chr7g0254201 33.690 187 97 5 26 188 131 314 1.83e-19 89.0
Msa0482790 MtrunA17_Chr2g0316831 33.808 281 144 7 207 447 127 405 2.25e-35 136
Msa0482790 MtrunA17_Chr2g0316791 34.028 288 140 8 204 447 88 369 3.22e-35 135
Msa0482790 MtrunA17_Chr2g0316191 33.333 282 143 6 208 447 92 370 9.38e-35 134
Msa0482790 MtrunA17_Chr3g0107881 41.284 218 108 9 226 431 61 270 6.17e-34 129
Msa0482790 MtrunA17_Chr3g0107881 34.054 185 96 6 23 182 137 320 3.30e-18 85.5
Msa0482790 MtrunA17_Chr5g0432341 38.197 233 127 9 226 447 59 285 8.37e-34 129
Msa0482790 MtrunA17_Chr5g0432341 32.955 176 95 5 29 182 143 317 3.02e-17 82.4
Msa0482790 MtrunA17_Chr2g0278671 33.617 235 141 4 219 444 51 279 2.79e-33 127
Msa0482790 MtrunA17_Chr2g0278671 29.744 195 107 4 22 186 129 323 3.33e-14 73.6
Msa0482790 MtrunA17_Chr5g0432331 34.921 252 147 9 207 447 71 316 9.89e-33 127
Msa0482790 MtrunA17_Chr5g0432331 30.114 176 100 5 29 182 174 348 5.07e-14 73.2
Msa0482790 MtrunA17_Chr5g0423911 81.944 72 13 0 119 190 4 75 1.72e-32 119
Msa0482790 MtrunA17_Chr5g0423911 94.286 35 2 0 413 447 1 35 3.67e-15 71.6
Msa0482790 MtrunA17_Chr2g0311241 29.630 324 146 5 204 447 72 393 2.19e-32 127
Msa0482790 MtrunA17_Chr2g0311251 33.463 257 129 5 231 447 49 303 6.14e-32 124
Msa0482790 MtrunA17_Chr2g0292281 37.705 183 95 6 19 182 30 212 1.09e-29 115
Msa0482790 MtrunA17_Chr2g0292281 40.462 173 85 5 284 447 17 180 7.25e-26 105
Msa0482790 MtrunA17_Chr2g0316811 35.874 223 115 6 204 401 62 281 2.39e-26 108
Msa0482790 MtrunA17_Chr5g0413051 30.268 261 163 9 203 447 84 341 2.41e-24 103
Msa0482790 MtrunA17_Chr5g0413051 30.435 184 97 4 34 186 194 377 1.51e-15 78.2
Msa0482790 MtrunA17_Chr3g0114461 34.225 187 100 5 22 186 7 192 1.26e-23 97.8
Msa0482790 MtrunA17_Chr3g0114461 38.255 149 88 4 302 447 9 156 1.14e-21 92.4
Msa0482790 MtrunA17_Chr4g0004591 30.292 274 119 7 204 447 89 320 1.76e-22 98.2
Msa0482790 MtrunA17_Chr5g0432401 34.156 243 100 11 217 447 56 250 3.52e-22 96.3
Msa0482790 MtrunA17_Chr2g0316141 31.330 233 135 8 238 447 11 241 8.73e-19 86.3
Msa0482790 MtrunA17_Chr2g0316181 31.330 233 135 8 238 447 11 241 8.73e-19 86.3
Msa0482790 MtrunA17_Chr1g0181501 31.579 152 97 4 302 447 3 153 3.99e-16 76.6
Msa0482790 MtrunA17_Chr1g0181501 28.177 181 104 4 27 182 6 185 2.78e-14 71.2
Msa0482790 MtrunA17_Chr3g0114491 39.175 97 57 2 207 302 33 128 9.13e-15 71.2
Msa0482790 MtrunA17_Chr6g0468731 44.928 69 34 2 231 299 22 86 4.67e-13 64.7
Msa0482790 MtrunA17_Chr5g0432321 38.136 118 69 3 313 428 17 132 5.29e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0482790 AT1G71695.1 47.737 243 123 3 207 445 59 301 4.01e-69 224
Msa0482790 AT1G71695.1 39.904 208 101 4 22 207 153 358 1.89e-38 143
Msa0482790 AT2G41480.1 40.800 250 137 5 204 446 41 286 4.62e-52 178
Msa0482790 AT2G41480.1 32.642 193 99 4 25 186 136 328 1.65e-18 86.7
Msa0482790 AT5G14130.1 38.554 249 146 2 206 447 46 294 3.14e-51 176
Msa0482790 AT5G14130.1 34.031 191 100 4 22 186 140 330 8.46e-25 104
Msa0482790 AT5G14130.2 38.095 252 149 2 203 447 84 335 6.23e-51 176
Msa0482790 AT5G14130.2 34.031 191 100 4 22 186 181 371 1.24e-24 105
Msa0482790 AT5G06730.1 40.000 255 141 6 204 447 45 298 1.32e-50 175
Msa0482790 AT5G06730.1 34.694 196 99 5 26 192 145 340 5.55e-24 103
Msa0482790 AT5G06720.1 38.189 254 147 4 204 447 44 297 1.28e-49 172
Msa0482790 AT5G06720.1 33.333 186 95 5 26 182 144 329 5.91e-21 94.0
Msa0482790 AT3G50990.1 37.102 283 156 10 182 447 28 305 5.55e-49 171
Msa0482790 AT3G50990.1 31.746 189 101 6 22 182 149 337 2.64e-22 97.8
Msa0482790 AT5G42180.1 37.549 253 146 5 204 447 35 284 9.62e-49 169
Msa0482790 AT5G42180.1 32.240 183 95 4 26 182 134 313 5.34e-22 96.7
Msa0482790 AT5G15180.1 35.075 268 164 4 181 441 22 286 1.47e-48 169
Msa0482790 AT5G15180.1 32.447 188 100 4 22 182 138 325 4.12e-24 102
Msa0482790 AT1G49570.1 41.634 257 129 8 207 447 63 314 4.45e-48 168
Msa0482790 AT1G49570.1 32.474 194 101 4 22 185 156 349 7.13e-20 90.9
Msa0482790 AT3G32980.1 39.431 246 140 4 207 443 46 291 1.41e-47 167
Msa0482790 AT3G32980.1 32.212 208 105 6 26 202 143 345 4.65e-23 100
Msa0482790 AT5G64120.1 39.754 244 137 4 204 441 47 286 1.51e-47 166
Msa0482790 AT5G64120.1 32.984 191 101 5 22 186 139 328 4.75e-21 94.0
Msa0482790 AT1G30870.1 39.676 247 133 6 207 445 66 304 2.51e-47 166
Msa0482790 AT1G30870.1 32.984 191 98 6 26 188 159 347 1.29e-17 84.3
Msa0482790 AT3G28200.1 38.696 230 135 4 223 447 52 280 2.71e-47 165
Msa0482790 AT3G28200.1 34.759 187 100 3 22 186 130 316 8.62e-24 101
Msa0482790 AT4G08770.1 38.281 256 142 6 198 443 35 284 2.85e-47 166
Msa0482790 AT4G08770.1 34.722 216 109 6 22 206 132 346 5.48e-28 114
Msa0482790 AT2G18980.1 40.637 251 136 6 207 447 40 287 4.53e-47 165
Msa0482790 AT2G18980.1 36.170 188 93 5 22 182 132 319 8.83e-26 107
Msa0482790 AT4G37520.1 36.905 252 148 5 207 447 42 293 6.92e-47 165
Msa0482790 AT4G37520.1 35.106 188 95 4 26 186 142 329 7.05e-27 110
Msa0482790 AT4G08780.1 38.281 256 142 6 198 443 35 284 1.23e-46 164
Msa0482790 AT4G08780.1 32.870 216 113 6 22 206 132 346 6.99e-25 105
Msa0482790 AT4G37530.1 37.008 254 145 6 207 447 42 293 1.28e-46 164
Msa0482790 AT4G37530.1 34.043 188 97 4 26 186 142 329 3.05e-24 103
Msa0482790 AT3G21770.1 36.546 249 145 6 204 442 41 286 1.77e-46 164
Msa0482790 AT3G21770.1 28.495 186 104 4 26 182 139 324 1.13e-17 84.3
Msa0482790 AT3G49120.1 38.211 246 143 4 207 443 47 292 4.34e-46 163
Msa0482790 AT3G49120.1 31.731 208 106 6 26 202 144 346 2.63e-20 92.4
Msa0482790 AT5G05340.1 36.885 244 149 3 208 447 46 288 4.83e-46 162
Msa0482790 AT5G05340.1 30.851 188 106 3 22 186 138 324 1.77e-19 89.4
Msa0482790 AT3G49110.1 38.462 247 141 5 207 443 48 293 1.53e-45 162
Msa0482790 AT3G49110.1 31.250 208 107 6 26 202 145 347 1.84e-20 92.8
Msa0482790 AT2G24800.1 37.354 257 144 6 203 447 42 293 2.21e-45 160
Msa0482790 AT2G24800.1 27.753 227 122 5 1 186 104 329 6.62e-20 90.9
Msa0482790 AT5G24070.1 36.719 256 145 5 204 447 49 299 2.92e-45 160
Msa0482790 AT5G24070.1 30.729 192 101 4 26 186 145 335 3.97e-18 85.9
Msa0482790 AT4G36430.1 37.302 252 145 6 205 445 43 292 3.25e-45 160
Msa0482790 AT4G36430.1 32.632 190 100 5 21 182 137 326 4.87e-24 102
Msa0482790 AT5G19890.1 39.200 250 138 6 207 445 45 291 5.08e-45 160
Msa0482790 AT5G19890.1 32.143 196 101 4 22 187 135 328 6.46e-22 96.7
Msa0482790 AT4G37520.2 36.508 252 146 6 207 447 42 290 7.73e-45 159
Msa0482790 AT4G37520.2 35.106 188 95 4 26 186 139 326 7.77e-27 110
Msa0482790 AT4G33420.1 37.398 246 147 4 204 447 49 289 8.72e-45 159
Msa0482790 AT4G33420.1 37.634 186 97 4 20 186 140 325 5.04e-29 116
Msa0482790 AT3G49960.1 38.095 252 145 6 207 447 42 293 1.20e-44 159
Msa0482790 AT3G49960.1 34.043 188 97 5 26 186 142 329 2.00e-20 92.4
Msa0482790 AT2G18140.1 37.255 255 143 8 204 445 47 297 1.44e-44 159
Msa0482790 AT2G18140.1 30.769 195 107 5 21 187 142 336 4.08e-22 97.4
Msa0482790 AT4G16270.1 38.039 255 145 8 204 447 62 314 1.83e-44 159
Msa0482790 AT4G16270.1 31.746 189 99 6 22 182 158 344 2.10e-18 86.7
Msa0482790 AT5G58400.1 39.004 241 137 5 208 441 46 283 2.20e-44 158
Msa0482790 AT5G58400.1 32.275 189 103 3 22 186 138 325 9.35e-22 95.9
Msa0482790 AT5G40150.1 38.158 228 136 4 223 445 63 290 2.28e-44 158
Msa0482790 AT5G40150.1 34.043 188 101 3 22 186 141 328 6.66e-24 102
Msa0482790 AT4G33420.2 37.398 246 147 4 204 447 96 336 2.44e-44 159
Msa0482790 AT4G33420.2 37.634 186 97 4 20 186 187 372 1.04e-28 116
Msa0482790 AT2G34060.1 38.528 231 130 4 223 441 73 303 2.59e-44 158
Msa0482790 AT2G34060.1 30.108 186 101 5 26 182 157 342 8.71e-16 79.0
Msa0482790 AT5G67400.1 36.759 253 147 6 207 447 42 293 6.33e-44 157
Msa0482790 AT5G67400.1 33.862 189 98 4 25 186 141 329 1.19e-21 95.9
Msa0482790 AT5G39580.1 37.500 248 144 5 204 444 37 280 7.14e-44 156
Msa0482790 AT5G39580.1 33.684 190 94 6 26 186 133 319 2.66e-17 82.8
Msa0482790 AT2G38380.1 39.231 260 142 7 199 447 43 297 7.92e-44 157
Msa0482790 AT2G38380.1 36.788 193 92 7 26 188 143 335 9.92e-23 99.4
Msa0482790 AT5G51890.1 36.797 231 135 4 226 447 60 288 7.93e-44 156
Msa0482790 AT5G51890.1 32.044 181 94 4 26 179 137 315 5.37e-18 85.1
Msa0482790 AT5G58390.1 38.095 231 129 6 226 447 55 280 1.21e-43 155
Msa0482790 AT5G58390.1 31.746 189 104 4 22 186 129 316 7.55e-21 93.2
Msa0482790 AT4G37530.2 37.712 236 136 5 207 431 42 277 1.47e-43 154
Msa0482790 AT4G37530.2 34.559 136 62 4 26 134 142 277 1.17e-13 71.6
Msa0482790 AT4G17690.1 39.216 255 136 7 205 447 39 286 1.81e-43 155
Msa0482790 AT4G17690.1 32.778 180 98 4 26 182 139 318 5.49e-19 88.2
Msa0482790 AT4G30170.1 36.653 251 146 5 207 447 42 289 2.39e-43 155
Msa0482790 AT4G30170.1 33.511 188 98 4 22 182 134 321 1.91e-23 100
Msa0482790 AT5G66390.1 36.965 257 145 8 204 447 45 297 2.71e-43 155
Msa0482790 AT5G66390.1 31.217 189 102 4 22 182 141 329 3.35e-22 97.4
Msa0482790 AT2G38390.1 41.102 236 128 6 223 447 62 297 3.42e-43 155
Msa0482790 AT2G38390.1 35.751 193 94 6 26 188 143 335 4.96e-23 100
Msa0482790 AT5G19880.1 39.216 255 140 6 207 447 40 293 3.70e-43 155
Msa0482790 AT5G19880.1 37.968 187 86 5 26 182 139 325 4.77e-26 108
Msa0482790 AT2G18150.1 34.902 255 149 8 204 445 48 298 2.38e-42 153
Msa0482790 AT2G18150.1 31.282 195 106 5 21 187 143 337 1.43e-24 104
Msa0482790 AT5G47000.1 39.149 235 129 5 223 447 64 294 4.48e-42 152
Msa0482790 AT5G47000.1 32.258 186 102 5 26 187 146 331 1.11e-17 84.3
Msa0482790 AT1G24110.1 36.864 236 136 7 223 447 53 286 5.28e-42 152
Msa0482790 AT1G24110.1 32.461 191 102 6 26 189 135 325 1.21e-20 92.8
Msa0482790 AT1G05240.1 34.694 245 151 3 204 441 38 280 6.54e-42 151
Msa0482790 AT1G05240.1 34.715 193 97 5 23 186 133 325 2.55e-22 97.8
Msa0482790 AT1G05250.1 34.694 245 151 3 204 441 38 280 6.54e-42 151
Msa0482790 AT1G05250.1 34.715 193 97 5 23 186 133 325 2.55e-22 97.8
Msa0482790 AT1G14540.1 36.066 244 151 5 208 447 37 279 6.60e-42 151
Msa0482790 AT1G14540.1 32.787 183 101 3 26 186 133 315 6.96e-21 93.2
Msa0482790 AT2G35380.1 38.400 250 139 7 204 440 42 289 6.67e-42 152
Msa0482790 AT2G35380.1 32.124 193 92 6 26 182 142 331 3.40e-18 85.9
Msa0482790 AT3G01190.1 35.270 241 147 3 207 441 41 278 1.27e-41 150
Msa0482790 AT3G01190.1 31.937 191 103 4 22 186 132 321 9.07e-25 104
Msa0482790 AT1G77100.1 36.885 244 150 3 203 444 35 276 2.63e-41 149
Msa0482790 AT1G77100.1 31.016 187 104 4 25 186 133 319 1.35e-15 77.8
Msa0482790 AT1G14550.1 35.918 245 151 6 208 447 42 285 2.75e-41 149
Msa0482790 AT1G14550.1 32.597 181 97 5 26 182 138 317 1.18e-18 87.0
Msa0482790 AT2G22420.1 34.630 257 149 8 204 447 35 285 2.79e-41 150
Msa0482790 AT2G22420.1 34.392 189 96 4 26 188 135 321 4.50e-25 105
Msa0482790 AT4G11290.1 35.458 251 145 6 212 447 41 289 2.80e-41 150
Msa0482790 AT4G11290.1 31.937 191 99 7 22 182 133 322 1.15e-21 95.9
Msa0482790 AT1G05260.1 36.681 229 134 5 223 442 57 283 9.37e-41 148
Msa0482790 AT1G05260.1 28.796 191 107 6 26 187 136 326 7.71e-19 87.8
Msa0482790 AT5G64100.1 36.694 248 141 6 200 441 49 286 3.90e-40 147
Msa0482790 AT5G64100.1 29.534 193 106 5 22 186 141 331 6.92e-15 75.9
Msa0482790 AT4G21960.1 34.263 251 156 5 204 447 43 291 9.65e-40 145
Msa0482790 AT4G21960.1 28.495 186 108 3 26 186 142 327 1.04e-14 75.5
Msa0482790 AT2G39040.1 34.510 255 153 5 203 444 57 310 1.67e-39 145
Msa0482790 AT2G39040.1 32.461 191 96 8 24 182 157 346 2.87e-18 86.3
Msa0482790 AT5G64110.1 36.059 269 149 7 183 441 30 285 2.73e-39 144
Msa0482790 AT5G64110.1 30.526 190 102 5 26 186 142 330 1.66e-13 71.6
Msa0482790 AT1G44970.1 36.111 252 151 5 204 445 57 308 4.27e-39 144
Msa0482790 AT1G44970.1 32.474 194 102 5 22 186 153 346 3.56e-21 94.7
Msa0482790 AT1G68850.1 33.594 256 153 6 207 447 45 298 6.55e-39 144
Msa0482790 AT1G68850.1 29.231 195 105 6 21 182 137 331 5.69e-15 76.3
Msa0482790 AT5G17820.1 35.200 250 148 5 204 447 36 277 1.28e-38 142
Msa0482790 AT5G17820.1 34.637 179 94 4 26 182 132 309 1.79e-22 97.8
Msa0482790 AT3G03670.1 33.202 253 158 5 204 447 35 285 1.61e-38 142
Msa0482790 AT3G03670.1 34.694 196 99 5 20 186 126 321 1.31e-22 98.6
Msa0482790 AT4G31760.1 38.397 237 127 9 224 447 60 290 4.82e-38 141
Msa0482790 AT4G31760.1 28.947 190 106 5 26 186 137 326 1.28e-16 81.3
Msa0482790 AT5G17820.2 35.200 250 148 5 204 447 89 330 8.94e-38 141
Msa0482790 AT5G17820.2 34.637 179 94 4 26 182 185 362 3.88e-22 97.8
Msa0482790 AT2G43480.1 33.071 254 153 5 204 445 49 297 9.73e-38 140
Msa0482790 AT2G43480.1 27.128 188 105 5 26 182 145 331 1.48e-12 68.9
Msa0482790 AT5G22410.1 31.908 304 167 10 163 445 3 287 1.33e-37 140
Msa0482790 AT5G22410.1 28.191 188 104 6 29 187 141 326 6.19e-13 70.1
Msa0482790 AT3G17070.1 33.597 253 154 5 207 447 53 303 2.48e-37 139
Msa0482790 AT3G17070.1 33.333 186 95 4 26 182 150 335 5.86e-22 97.1
Msa0482790 AT2G37130.2 32.806 253 158 7 204 447 11 260 5.92e-37 137
Msa0482790 AT2G37130.2 26.738 187 111 4 22 182 106 292 5.19e-15 75.9
Msa0482790 AT2G37130.1 32.806 253 158 7 204 447 42 291 1.07e-36 137
Msa0482790 AT2G37130.1 26.738 187 111 4 22 182 137 323 8.17e-15 75.9
Msa0482790 AT4G26010.1 34.400 250 148 8 204 447 34 273 1.70e-33 128
Msa0482790 AT4G26010.1 34.254 181 97 6 26 187 133 310 4.57e-20 90.9
Msa0482790 AT4G26010.2 34.400 250 148 8 204 447 62 301 2.65e-33 128
Msa0482790 AT4G26010.2 34.254 181 97 6 26 187 161 338 4.93e-20 91.3
Msa0482790 AT4G25980.1 33.186 226 141 4 226 444 60 282 3.60e-32 125
Msa0482790 AT4G25980.1 29.534 193 103 5 26 186 135 326 3.38e-14 73.9
Msa0482790 AT4G33870.1 30.556 288 154 6 204 447 80 365 4.33e-32 126
Msa0482790 AT1G34510.1 31.513 238 147 8 216 447 46 273 3.31e-31 122
Msa0482790 AT1G34510.1 32.967 182 98 6 26 187 133 310 6.85e-17 81.6
Msa0482790 AT2G35380.2 37.000 200 112 6 253 440 4 201 5.77e-30 117
Msa0482790 AT2G35380.2 32.124 193 92 6 26 182 54 243 8.55e-19 85.9
Msa0482790 AT5G39580.2 38.922 167 98 2 204 370 37 199 7.45e-29 114
Msa0482790 AT3G17070.2 31.982 222 137 5 238 447 21 240 1.40e-28 114
Msa0482790 AT3G17070.2 33.333 186 95 4 26 182 87 272 2.41e-22 96.7
Msa0482790 AT2G24800.2 40.625 160 88 4 203 360 42 196 3.60e-27 109
Msa0482790 AT4G25980.2 39.259 135 79 2 226 360 105 236 2.71e-22 96.7
Msa0482790 AT4G32320.1 32.292 192 100 8 221 397 112 288 2.99e-12 68.2

Find 98 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATATTTAGTTGCTCTTTC+TGG 0.045980 3_3:-90230993 Msa0482790:CDS
TCGAGTTGTTTCTTGAAATT+TGG 0.098915 3_3:+90230897 None:intergenic
ACCTTAGATTTCCTATTATT+TGG 0.128939 3_3:+90237209 None:intergenic
TCGAGTTGTTTCTTGAAATT+TGG 0.165142 3_3:+90237512 None:intergenic
GTCCCTCAACGCCGTTAATT+TGG 0.208641 3_3:-90237468 Msa0482790:CDS
CTTTCTGGGGCGCACACTTT+TGG 0.229701 3_3:-90230978 Msa0482790:CDS
CTATCTGGTGCCCACACTTT+TGG 0.251851 3_3:-90237593 Msa0482790:CDS
CCCAATGGCACGTCAAAATC+TGG 0.255614 3_3:+90237740 None:intergenic
CATATTTAGTTGCTCTTTCT+GGG 0.259697 3_3:-90230992 Msa0482790:CDS
TTCTTGAAATTTGGGTCTAT+TGG 0.284321 3_3:+90230906 None:intergenic
CGAGTTGTTTCTTGAAATTT+GGG 0.292061 3_3:+90230898 None:intergenic
AATATTATGTTACGCAATAA+AGG 0.298757 3_3:+90237770 None:intergenic
CTGCATTTACACTGAAGTTT+AGG 0.301903 3_3:+90237705 None:intergenic
TATTGGTGGGTTTGTATCAA+TGG 0.316149 3_3:+90230923 None:intergenic
GAAATCTAAGGTGGCATCTA+TGG 0.324726 3_3:-90237198 Msa0482790:CDS
TTCACAATCTCCTTAGTCTT+AGG 0.327909 3_3:+90230735 None:intergenic
TTCACAATCTCCTTAGTCTT+AGG 0.327909 3_3:+90237350 None:intergenic
TCCCAATGGTACATCAAAAT+CGG 0.361315 3_3:+90231124 None:intergenic
TCCAAATAATAGGAAATCTA+AGG 0.367020 3_3:-90237210 Msa0482790:CDS
TCCTGCCAACTTCGCCTTAA+GGG 0.372726 3_3:-90232068 Msa0482790:CDS
GTGTTCAGTGATTGATCATT+CGG 0.377475 3_3:+90230864 None:intergenic
ATGATTCGGTTGAACATTGT+TGG 0.380602 3_3:+90237557 None:intergenic
ACCGATGTAGTTGCTCTATC+TGG 0.387253 3_3:-90237608 Msa0482790:CDS
TTGAAATTTGGGTCTATTGG+TGG 0.400100 3_3:+90230909 None:intergenic
TTGAATAGCCTCTTCCCTTA+AGG 0.400879 3_3:+90232054 None:intergenic
TCTGTTCGTGCAAATGGTAC+TGG 0.412087 3_3:+90237671 None:intergenic
TCCCTTAAGGCGAAGTTGGC+AGG 0.412132 3_3:+90232067 None:intergenic
AGTTCATCTGTTCGTGCAAA+TGG 0.412175 3_3:+90237665 None:intergenic
TTGAAATTTGGTTCGATTGG+TGG 0.414542 3_3:+90237524 None:intergenic
GTGCAGTTGCATTGAAGGTT+AGG 0.416101 3_3:+90231090 None:intergenic
CCCAATGGTACATCAAAATC+GGG 0.416121 3_3:+90231125 None:intergenic
TTGCGTAACATAATATTTGA+AGG 0.420033 3_3:-90237764 Msa0482790:CDS
GTCTGGTGCAGTTGCATTGA+AGG 0.420651 3_3:+90231085 None:intergenic
TCCGTTCTTTCAAATGGTAC+TGG 0.425247 3_3:+90231056 None:intergenic
TGTTCATCCGTTCTTTCAAA+TGG 0.431405 3_3:+90231050 None:intergenic
ATCCTGCCAACTTCGCCTTA+AGG 0.436419 3_3:-90232069 Msa0482790:CDS
TGAAATTTGGGTCTATTGGT+GGG 0.438967 3_3:+90230910 None:intergenic
AGCAAGTCATCCTAAGACTA+AGG 0.441256 3_3:-90230745 Msa0482790:CDS
GTCATGTCCTAAGGATTGTA+AGG 0.443180 3_3:-90232640 Msa0482790:intron
CTCTTCCCTTAAGGCGAAGT+TGG 0.444275 3_3:+90232063 None:intergenic
TGTTCAAACATCCAAATTAA+CGG 0.445931 3_3:+90237457 None:intergenic
ATCCAAATTAACGGCGTTGA+GGG 0.449517 3_3:+90237466 None:intergenic
GTGGGTCGGATTCAATGATT+CGG 0.450356 3_3:+90237543 None:intergenic
TTCTTGAAATTTGGTTCGAT+TGG 0.452274 3_3:+90237521 None:intergenic
TGAAATTTGGTTCGATTGGT+GGG 0.456433 3_3:+90237525 None:intergenic
GGCAAGTCATCCTAAGACTA+AGG 0.457751 3_3:-90237360 Msa0482790:CDS
TTTCAAACACATCTTCAAGA+TGG 0.468035 3_3:+90232615 None:intergenic
AATGGTACTGGAAGATTGTC+TGG 0.471550 3_3:+90231068 None:intergenic
AAAGATAGTGGCCAAGCTCC+TGG 0.486293 3_3:-90232593 Msa0482790:CDS
TTTGAATTTGTACAGCTTGG+AGG 0.486572 3_3:-90231149 Msa0482790:intron
ATTGAATAGTGTAGGACAAT+GGG 0.487933 3_3:+90230950 None:intergenic
ATTTGGTTCGATTGGTGGGT+CGG 0.494826 3_3:+90237529 None:intergenic
GGCACGAGAAGCTGTTCGTC+AGG 0.497284 3_3:-90231954 Msa0482790:intron
ATCACTGAACACAATTAACT+TGG 0.504188 3_3:-90230853 Msa0482790:CDS
TAGTCTTAGGATGACTTGCT+AGG 0.505832 3_3:+90230748 None:intergenic
CCAATGGCACGTCAAAATCT+GGG 0.508698 3_3:+90237741 None:intergenic
CTGTTCGTGCAAATGGTACT+GGG 0.511334 3_3:+90237672 None:intergenic
GCCTGAGTATGCCAGGAGCT+TGG 0.511560 3_3:+90232582 None:intergenic
AGGCTGTCTCTTCTTCCCAA+TGG 0.513651 3_3:+90231110 None:intergenic
GCGTTGAGGGACTCCTCATT+CGG 0.514253 3_3:+90237479 None:intergenic
ATCTATGGTGGAAGAGGTGG+TGG 0.516164 3_3:-90237183 Msa0482790:CDS
TCCAGTACCATTTGAAAGAA+CGG 0.520517 3_3:-90231057 Msa0482790:CDS
TACATGTTATCGAATTTCGT+TGG 0.526519 3_3:+90230819 None:intergenic
GGTGGCATCTATGGTGGAAG+AGG 0.527491 3_3:-90237189 Msa0482790:CDS
CTAAACTTCAGTGTAAATGC+AGG 0.534350 3_3:-90237704 Msa0482790:CDS
GGCATCTATGGTGGAAGAGG+TGG 0.536043 3_3:-90237186 Msa0482790:CDS
GCCAAGCTCCTGGCATACTC+AGG 0.544317 3_3:-90232583 Msa0482790:CDS
CTTTCTGGTTAGAAGCAAAG+AGG 0.545522 3_3:+90237327 None:intergenic
GTTTACATCGGATCAAGACT+TGG 0.546163 3_3:-90237381 Msa0482790:CDS
CAACTTCGCCTTAAGGGAAG+AGG 0.550698 3_3:-90232062 Msa0482790:CDS
TATTAATCTCTTGAATCACC+AGG 0.551990 3_3:-90230793 Msa0482790:CDS
CATTCTAGTTAGAAGCAAAG+AGG 0.554926 3_3:+90230712 None:intergenic
TTACCTGGGAAAAGCAGTCA+TGG 0.555689 3_3:+90232552 None:intergenic
CGAAGCAACATGTCCGAATG+AGG 0.556767 3_3:-90237492 Msa0482790:CDS
GAATTGAAACAGGGATGTGA+TGG 0.557716 3_3:-90232136 Msa0482790:intron
CATCCAAATTAACGGCGTTG+AGG 0.565870 3_3:+90237465 None:intergenic
AGAAAGAGCAACTAAATATG+TGG 0.569912 3_3:+90230995 None:intergenic
TAATTCGTAGACAGTGTCCA+CGG 0.571658 3_3:-90232009 Msa0482790:CDS
GATTGAATAGTGTAGGACAA+TGG 0.573662 3_3:+90230949 None:intergenic
ATCTAAGGTGGCATCTATGG+TGG 0.582875 3_3:-90237195 Msa0482790:CDS
ATATTTAGTTGCTCTTTCTG+GGG 0.586133 3_3:-90230991 Msa0482790:CDS
AATTCGTAGACAGTGTCCAC+GGG 0.597781 3_3:-90232008 Msa0482790:CDS
TCCACGGGTTGTCTCGTGTG+CGG 0.607056 3_3:-90231993 Msa0482790:CDS
AATGAGCTTGACCAAAAGTG+TGG 0.611586 3_3:+90237582 None:intergenic
ATGGTTCGATTGAATAGTGT+AGG 0.630958 3_3:+90230942 None:intergenic
TCCGCACACGAGACAACCCG+TGG 0.634908 3_3:+90231992 None:intergenic
AAATAATAGGAAATCTAAGG+TGG 0.648910 3_3:-90237207 Msa0482790:CDS
ATGAGCTTGACCAAAAGTGT+GGG 0.655019 3_3:+90237583 None:intergenic
TCACCAGGGTGTGTTTACAT+CGG 0.667869 3_3:-90237393 Msa0482790:intron
ACCAGATAGAGCAACTACAT+CGG 0.673269 3_3:+90237607 None:intergenic
ATTAATCTCTTGAATCACCA+GGG 0.684393 3_3:-90230792 Msa0482790:CDS
ACTGTCTACGAATTAGAGCA+CGG 0.687392 3_3:+90232017 None:intergenic
GATCAGATGTAAACACACCC+TGG 0.689585 3_3:+90230775 None:intergenic
TGCGGACATACTCGTCCTCG+CGG 0.695282 3_3:-90231975 Msa0482790:CDS
TACGCAATAAAGGACATCGA+GGG 0.715776 3_3:+90237780 None:intergenic
CCAATGGTACATCAAAATCG+GGG 0.716165 3_3:+90231126 None:intergenic
GAACAGCTTCTCGTGCCGCG+AGG 0.721787 3_3:+90231960 None:intergenic
TTACGCAATAAAGGACATCG+AGG 0.746500 3_3:+90237779 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTATTAATTTTAAAACA+TGG + chr3_3:90232556-90232575 None:intergenic 10.0%
!!! TATGTTGATAATATATTTTT+TGG - chr3_3:90232719-90232738 Msa0482790:intron 10.0%
!!! AATTTGGTTTTTTATTTTTA+CGG - chr3_3:90234766-90234785 Msa0482790:intron 10.0%
!! TAAAAAAAATAAAACTATTC+GGG + chr3_3:90234820-90234839 None:intergenic 10.0%
!!! ATTTTAGGATTAAATTATTT+TGG - chr3_3:90235387-90235406 Msa0482790:intron 10.0%
!!! ATTATCTTTATCTTTTAAAT+AGG + chr3_3:90236959-90236978 None:intergenic 10.0%
!!! TATTGTTAATTTTTTAGGTA+AGG + chr3_3:90231490-90231509 None:intergenic 15.0%
!! TAAATCAAGAAGATATATTA+AGG + chr3_3:90231743-90231762 None:intergenic 15.0%
!! ATTCCCTATTAAAAAAATTA+GGG + chr3_3:90231823-90231842 None:intergenic 15.0%
!! AAATTAATAAAAGCTCTATA+TGG - chr3_3:90232563-90232582 Msa0482790:CDS 15.0%
!! TATCAATATATCAAATTGAT+TGG + chr3_3:90232690-90232709 None:intergenic 15.0%
!!! TTTAGTCAAATTTTTGTTTA+TGG - chr3_3:90233545-90233564 Msa0482790:intron 15.0%
!!! TTTTGTTTATGGTTTTATTT+CGG - chr3_3:90233556-90233575 Msa0482790:intron 15.0%
!! ACAATAAAAAAAAACCAATA+AGG + chr3_3:90234038-90234057 None:intergenic 15.0%
!!! TTTTTTTATTGTTTTCGATT+CGG - chr3_3:90234046-90234065 Msa0482790:intron 15.0%
!!! ATTTTTAAATATGTTTCACA+AGG - chr3_3:90234316-90234335 Msa0482790:intron 15.0%
!! TGATCACAAAAAAAAAAAAA+AGG + chr3_3:90234720-90234739 None:intergenic 15.0%
!! TAGCAAAATAAATTATCTAA+AGG - chr3_3:90234958-90234977 Msa0482790:intron 15.0%
!! TTACCAAATAAAAAAATCAT+TGG - chr3_3:90235018-90235037 Msa0482790:intron 15.0%
!!! AATCCAATGATTTTTTTATT+TGG + chr3_3:90235024-90235043 None:intergenic 15.0%
!!! ATGATAGTTTTATTAATGAA+AGG - chr3_3:90235088-90235107 Msa0482790:intron 15.0%
!!! TGATAGTTTTATTAATGAAA+GGG - chr3_3:90235089-90235108 Msa0482790:intron 15.0%
!!! TATTTTATAAAGATGGTAAA+GGG + chr3_3:90236263-90236282 None:intergenic 15.0%
!!! AACTAACTATTTTATAAAGA+TGG + chr3_3:90236270-90236289 None:intergenic 15.0%
!! CGTAAATTATATGTAAATAA+AGG + chr3_3:90236361-90236380 None:intergenic 15.0%
!! AATATTATGTTACGCAATAA+AGG + chr3_3:90230767-90230786 None:intergenic 20.0%
!!! ATTTGTTAAAAAACTCTTTC+TGG + chr3_3:90231225-90231244 None:intergenic 20.0%
!!! TGTTATGTTATGTTATTTCA+CGG - chr3_3:90231408-90231427 Msa0482790:intron 20.0%
!! TCAAAAAAGAGGTTATTAAA+AGG + chr3_3:90231696-90231715 None:intergenic 20.0%
!!! TTTAATAACCTCTTTTTTGA+AGG - chr3_3:90231696-90231715 Msa0482790:intron 20.0%
!!! AACACCCTAATTTTTTTAAT+AGG - chr3_3:90231816-90231835 Msa0482790:intron 20.0%
!!! ACACCCTAATTTTTTTAATA+GGG - chr3_3:90231817-90231836 Msa0482790:intron 20.0%
!! CATTCCCTATTAAAAAAATT+AGG + chr3_3:90231824-90231843 None:intergenic 20.0%
!!! AGATTATGATAATCCTTTTT+TGG + chr3_3:90231942-90231961 None:intergenic 20.0%
!! CTAAGTTTGAAAATAAAGTT+TGG - chr3_3:90232211-90232230 Msa0482790:intron 20.0%
!!! TATCAAATTCATTTTGCATA+AGG + chr3_3:90232781-90232800 None:intergenic 20.0%
!! ACCGTTAGATTAAAAAATTA+TGG - chr3_3:90233133-90233152 Msa0482790:intron 20.0%
!!! CCCATAATTTTTTAATCTAA+CGG + chr3_3:90233137-90233156 None:intergenic 20.0%
!! CCGTTAGATTAAAAAATTAT+GGG - chr3_3:90233134-90233153 Msa0482790:intron 20.0%
!! TATGGGAATCATAAATTAAA+TGG - chr3_3:90233151-90233170 Msa0482790:intron 20.0%
!! TAAACGTAAACAAAAAAGAA+GGG - chr3_3:90233210-90233229 Msa0482790:intron 20.0%
!!! TTTATCATTGATTAAGTTTG+GGG + chr3_3:90233903-90233922 None:intergenic 20.0%
!!! GTTTATCATTGATTAAGTTT+GGG + chr3_3:90233904-90233923 None:intergenic 20.0%
!!! AGTTTATCATTGATTAAGTT+TGG + chr3_3:90233905-90233924 None:intergenic 20.0%
!!! AAGATAATCAGTATTGATAA+GGG + chr3_3:90234147-90234166 None:intergenic 20.0%
!!! TAAGATAATCAGTATTGATA+AGG + chr3_3:90234148-90234167 None:intergenic 20.0%
!! AATAAACAAAAATGAGGAAA+GGG + chr3_3:90234611-90234630 None:intergenic 20.0%
!! AAATAAACAAAAATGAGGAA+AGG + chr3_3:90234612-90234631 None:intergenic 20.0%
!!! TTTCCTCATTTTTGTTTATT+TGG - chr3_3:90234611-90234630 Msa0482790:intron 20.0%
!! CCAAATTTATGTATGAAAAA+TGG + chr3_3:90234753-90234772 None:intergenic 20.0%
!!! CCATTTTTCATACATAAATT+TGG - chr3_3:90234750-90234769 Msa0482790:intron 20.0%
!!! TTTTATTTTTACGGTAAGTA+TGG - chr3_3:90234775-90234794 Msa0482790:intron 20.0%
!!! ACACATTTTATTTTGAAAGA+CGG - chr3_3:90234852-90234871 Msa0482790:intron 20.0%
!! TAATATTTAGTTAACCACAA+CGG + chr3_3:90234911-90234930 None:intergenic 20.0%
!! ATATGATAGAAATGAAAAGA+GGG - chr3_3:90235336-90235355 Msa0482790:intron 20.0%
!!! GAATGAATGTATGAAATTTT+AGG - chr3_3:90235372-90235391 Msa0482790:intron 20.0%
!!! TATTTTGGTTACACAATTTT+TGG - chr3_3:90235402-90235421 Msa0482790:intron 20.0%
!!! CTCAATGATATTTTAAGAAA+AGG - chr3_3:90235506-90235525 Msa0482790:intron 20.0%
!! TTGCGTTAATTATATTATTC+TGG + chr3_3:90235550-90235569 None:intergenic 20.0%
!! TATTTATAGATGGATATTGA+GGG + chr3_3:90235687-90235706 None:intergenic 20.0%
!! ATATTTATAGATGGATATTG+AGG + chr3_3:90235688-90235707 None:intergenic 20.0%
!! TGGATGAAATTCAATAAATA+AGG - chr3_3:90236094-90236113 Msa0482790:intron 20.0%
!! GGATGAAATTCAATAAATAA+GGG - chr3_3:90236095-90236114 Msa0482790:intron 20.0%
!!! TAACATTTTTTCTATATCTC+AGG + chr3_3:90236180-90236199 None:intergenic 20.0%
!!! AAGAAACAATTATTTTGAGA+CGG - chr3_3:90236200-90236219 Msa0482790:intron 20.0%
!!! TTTCAAAAATTAGTCTACAA+TGG - chr3_3:90236236-90236255 Msa0482790:intron 20.0%
!!! CTATTTTATAAAGATGGTAA+AGG + chr3_3:90236264-90236283 None:intergenic 20.0%
!! TTTCCTTATGATAAAATAAG+AGG - chr3_3:90236920-90236939 Msa0482790:intron 20.0%
!!! TTACCTCTTATTTTATCATA+AGG + chr3_3:90236926-90236945 None:intergenic 20.0%
!!! ACATGAGATTAAATTTTTAC+TGG - chr3_3:90237209-90237228 Msa0482790:CDS 20.0%
! TTGCGTAACATAATATTTGA+AGG - chr3_3:90230770-90230789 Msa0482790:CDS 25.0%
!!! GAATTTTTTTGATCCGAAAA+CGG + chr3_3:90230900-90230919 None:intergenic 25.0%
! TGTTCAAACATCCAAATTAA+CGG + chr3_3:90231080-90231099 None:intergenic 25.0%
! TACATATTATCGAATGTGTT+TGG + chr3_3:90231103-90231122 None:intergenic 25.0%
!!! ATTTGCTAATGCTTTTGTTA+AGG - chr3_3:90231243-90231262 Msa0482790:intron 25.0%
!!! TTTTGTTAAGGTTAGTCAAT+TGG - chr3_3:90231255-90231274 Msa0482790:intron 25.0%
! TCCAAATAATAGGAAATCTA+AGG - chr3_3:90231324-90231343 Msa0482790:intron 25.0%
! ACCTTAGATTTCCTATTATT+TGG + chr3_3:90231328-90231347 None:intergenic 25.0%
! AAATAATAGGAAATCTAAGG+TGG - chr3_3:90231327-90231346 Msa0482790:intron 25.0%
!!! GTTATGTTATGTTATTTCAC+GGG - chr3_3:90231409-90231428 Msa0482790:intron 25.0%
!!! TTATGTTATGTTATTTCACG+GGG - chr3_3:90231410-90231429 Msa0482790:intron 25.0%
! TGTATGAAATGTGTAATAAG+TGG - chr3_3:90231605-90231624 Msa0482790:intron 25.0%
!!! AAATATGTTCGTTTTTACAG+TGG - chr3_3:90231785-90231804 Msa0482790:intron 25.0%
!! TCGAAAACATTTTCCAAAAA+AGG - chr3_3:90231926-90231945 Msa0482790:intron 25.0%
!! AATCTATCATATAGAGCTTT+TGG + chr3_3:90232602-90232621 None:intergenic 25.0%
!! AGCTCTTTTCTTATTGAAAA+TGG - chr3_3:90232623-90232642 Msa0482790:CDS 25.0%
! AACAAATAAAAAGATGTGCA+AGG - chr3_3:90232745-90232764 Msa0482790:intron 25.0%
!!! GAGAACTTAGATATTTTTTC+TGG - chr3_3:90232813-90232832 Msa0482790:intron 25.0%
!!! CTTAGATATTTTTTCTGGAT+TGG - chr3_3:90232818-90232837 Msa0482790:intron 25.0%
!! ATTTATCTATACGGGTTTTT+CGG + chr3_3:90232983-90233002 None:intergenic 25.0%
! GTTTGCATATTTATCTATAC+GGG + chr3_3:90232991-90233010 None:intergenic 25.0%
! CGTTTGCATATTTATCTATA+CGG + chr3_3:90232992-90233011 None:intergenic 25.0%
! CGTATAGATAAATATGCAAA+CGG - chr3_3:90232990-90233009 Msa0482790:intron 25.0%
! GTATAGATAAATATGCAAAC+GGG - chr3_3:90232991-90233010 Msa0482790:intron 25.0%
! GGAATCATAAATTAAATGGA+TGG - chr3_3:90233155-90233174 Msa0482790:intron 25.0%
! GTAAACGTAAACAAAAAAGA+AGG - chr3_3:90233209-90233228 Msa0482790:intron 25.0%
!! CTAAAGTTGTATTGAGTTTT+GGG + chr3_3:90233456-90233475 None:intergenic 25.0%
!!! TCTAAAGTTGTATTGAGTTT+TGG + chr3_3:90233457-90233476 None:intergenic 25.0%
!! GGTTGAAATAAAATCCTTTT+CGG - chr3_3:90233670-90233689 Msa0482790:intron 25.0%
!! AACTTGTAAAAAGCATAACA+TGG - chr3_3:90233921-90233940 Msa0482790:intron 25.0%
! TTAATAAAAAGAGAACTGCT+TGG - chr3_3:90234116-90234135 Msa0482790:intron 25.0%
!!! AGATAATCAGTATTGATAAG+GGG + chr3_3:90234146-90234165 None:intergenic 25.0%
! CAATAAAATAGTAAGTGTTC+AGG - chr3_3:90234251-90234270 Msa0482790:intron 25.0%
! TAAAACATTAACACTGTGTT+TGG - chr3_3:90234383-90234402 Msa0482790:intron 25.0%
! TGTTTGGTTGAAAAGAAATA+AGG - chr3_3:90234399-90234418 Msa0482790:intron 25.0%
! AAGAGAGAAAAACATTATTG+TGG - chr3_3:90234494-90234513 Msa0482790:intron 25.0%
! AGAGAGAAAAACATTATTGT+GGG - chr3_3:90234495-90234514 Msa0482790:intron 25.0%
! CAATGGAAAGTGAAAATAAA+AGG + chr3_3:90234575-90234594 None:intergenic 25.0%
! TTGCCAAATAAACAAAAATG+AGG + chr3_3:90234617-90234636 None:intergenic 25.0%
! GATATGATAGAAATGAAAAG+AGG - chr3_3:90235335-90235354 Msa0482790:intron 25.0%
! ACTTGCATGATATTTATAGA+TGG + chr3_3:90235697-90235716 None:intergenic 25.0%
! ACCAATTAGTAAACCAAAAA+TGG - chr3_3:90235732-90235751 Msa0482790:intron 25.0%
!!! ACCATTTTTGGTTTACTAAT+TGG + chr3_3:90235736-90235755 None:intergenic 25.0%
! TTAGTAAACCAAAAATGGTA+AGG - chr3_3:90235737-90235756 Msa0482790:intron 25.0%
! TAGTAAACCAAAAATGGTAA+GGG - chr3_3:90235738-90235757 Msa0482790:intron 25.0%
!!! TCCTTGATTTTTTTTTACCT+GGG + chr3_3:90235999-90236018 None:intergenic 25.0%
!!! TTCCTTGATTTTTTTTTACC+TGG + chr3_3:90236000-90236019 None:intergenic 25.0%
!!! ATGTTGATTTGAATTGAAAC+AGG - chr3_3:90236388-90236407 Msa0482790:intron 25.0%
!!! TGTTGATTTGAATTGAAACA+GGG - chr3_3:90236389-90236408 Msa0482790:intron 25.0%
! AATGACTAACTTCAAGTATT+TGG + chr3_3:90236746-90236765 None:intergenic 25.0%
!!! TTCAATGTGTTATTTGATCA+CGG - chr3_3:90237266-90237285 Msa0482790:CDS 25.0%
! AGAAAATGTGAAATAATGCT+AGG + chr3_3:90237344-90237363 None:intergenic 25.0%
! TTATTTGAATTTGTACAGCT+TGG - chr3_3:90237382-90237401 Msa0482790:CDS 25.0%
! GATGAACTATTAACCGTTTT+CGG - chr3_3:90230884-90230903 Msa0482790:CDS 30.0%
! TTCTTGAAATTTGGTTCGAT+TGG + chr3_3:90231016-90231035 None:intergenic 30.0%
!! TCGAGTTGTTTCTTGAAATT+TGG + chr3_3:90231025-90231044 None:intergenic 30.0%
! CATGTTTTGCTCCAAATAAT+AGG - chr3_3:90231314-90231333 Msa0482790:intron 30.0%
!!! GTTAATTTTTTAGGTAAGGC+AGG + chr3_3:90231486-90231505 None:intergenic 30.0%
TAAACCATCATCAAACAAGA+TGG - chr3_3:90232258-90232277 Msa0482790:intron 30.0%
AAACCATCATCAAACAAGAT+GGG - chr3_3:90232259-90232278 Msa0482790:intron 30.0%
!! TTCTTCACCAAACTTGTTTT+TGG + chr3_3:90232287-90232306 None:intergenic 30.0%
! TGAATTTGATAAGAGCATGA+TGG - chr3_3:90232790-90232809 Msa0482790:intron 30.0%
! GAATTTGATAAGAGCATGAT+GGG - chr3_3:90232791-90232810 Msa0482790:intron 30.0%
GAAATCAAGCAACTTTCTAA+TGG - chr3_3:90232840-90232859 Msa0482790:intron 30.0%
!! TCTAATGGTATTTTGAGTGT+AGG - chr3_3:90232855-90232874 Msa0482790:intron 30.0%
! TTTATCTATACGGGTTTTTC+GGG + chr3_3:90232982-90233001 None:intergenic 30.0%
TGAGAGAATAACAGTAGAAA+GGG + chr3_3:90233237-90233256 None:intergenic 30.0%
GAGATGAAAATATGAGAAAG+AGG + chr3_3:90233351-90233370 None:intergenic 30.0%
AAGAGATTGAGAGATACAAT+TGG + chr3_3:90233392-90233411 None:intergenic 30.0%
AATTGTATCTCTCAATCTCT+TGG - chr3_3:90233391-90233410 Msa0482790:intron 30.0%
!!! GGCATATTTTAAAGCAAAAG+GGG + chr3_3:90233435-90233454 None:intergenic 30.0%
!!! GGGCATATTTTAAAGCAAAA+GGG + chr3_3:90233436-90233455 None:intergenic 30.0%
!!! TGGGCATATTTTAAAGCAAA+AGG + chr3_3:90233437-90233456 None:intergenic 30.0%
CTATTGTCTATCTTGCAATT+AGG + chr3_3:90233754-90233773 None:intergenic 30.0%
TGAGAATACAATGGAAATCT+AGG + chr3_3:90233783-90233802 None:intergenic 30.0%
! TTTCTCTCTTCCTTATTTCT+TGG + chr3_3:90234412-90234431 None:intergenic 30.0%
AGAGAAATAGAGTAGATTTG+AGG + chr3_3:90235191-90235210 None:intergenic 30.0%
GAAATTGAGAAGAGAGAAAT+AGG + chr3_3:90235244-90235263 None:intergenic 30.0%
! TTTCCTCTAAGAGATTATCA+AGG - chr3_3:90235830-90235849 Msa0482790:intron 30.0%
GACTAGATTGGAATTACTAT+TGG - chr3_3:90235869-90235888 Msa0482790:intron 30.0%
TTTCAAACACATCTTCAAGA+TGG + chr3_3:90235922-90235941 None:intergenic 30.0%
GATGTGTTTGAAAAAGATAG+TGG - chr3_3:90235929-90235948 Msa0482790:intron 30.0%
TCCCAGGTAAAAAAAAATCA+AGG - chr3_3:90235995-90236014 Msa0482790:intron 30.0%
AGTTAGTGAAGTAGTTAAGT+TGG - chr3_3:90236074-90236093 Msa0482790:intron 30.0%
CTATCCTTAACACAATTATG+AGG - chr3_3:90236320-90236339 Msa0482790:intron 30.0%
TGAACCTCATAATTGTGTTA+AGG + chr3_3:90236327-90236346 None:intergenic 30.0%
! TTTTCGTTTGCCTCATTTTA+AGG - chr3_3:90236656-90236675 Msa0482790:intron 30.0%
! TCTAAGATAAGGATGATCTT+AGG + chr3_3:90236874-90236893 None:intergenic 30.0%
TCTTTATCAGAATTCGAACT+CGG + chr3_3:90237072-90237091 None:intergenic 30.0%
! ATATGTGGCATCAAATTTTC+TGG + chr3_3:90237527-90237546 None:intergenic 30.0%
AGAAAGAGCAACTAAATATG+TGG + chr3_3:90237542-90237561 None:intergenic 30.0%
ACATATTTAGTTGCTCTTTC+TGG - chr3_3:90237541-90237560 Msa0482790:CDS 30.0%
CATATTTAGTTGCTCTTTCT+GGG - chr3_3:90237542-90237561 Msa0482790:CDS 30.0%
ATATTTAGTTGCTCTTTCTG+GGG - chr3_3:90237543-90237562 Msa0482790:CDS 30.0%
ATTGAATAGTGTAGGACAAT+GGG + chr3_3:90237587-90237606 None:intergenic 30.0%
TTCTTGAAATTTGGGTCTAT+TGG + chr3_3:90237631-90237650 None:intergenic 30.0%
!! CGAGTTGTTTCTTGAAATTT+GGG + chr3_3:90231024-90231043 None:intergenic 30.0%
!! TCGAGTTGTTTCTTGAAATT+TGG + chr3_3:90231025-90231044 None:intergenic 30.0%
ATCACTGAACACAATTAACT+TGG - chr3_3:90237681-90237700 Msa0482790:CDS 30.0%
TACATGTTATCGAATTTCGT+TGG + chr3_3:90237718-90237737 None:intergenic 30.0%
TATTAATCTCTTGAATCACC+AGG - chr3_3:90237741-90237760 Msa0482790:CDS 30.0%
ATTAATCTCTTGAATCACCA+GGG - chr3_3:90237742-90237761 Msa0482790:CDS 30.0%
CTGCATTTACACTGAAGTTT+AGG + chr3_3:90230832-90230851 None:intergenic 35.0%
CTAAACTTCAGTGTAAATGC+AGG - chr3_3:90230830-90230849 Msa0482790:CDS 35.0%
!! ATGATTCGGTTGAACATTGT+TGG + chr3_3:90230980-90230999 None:intergenic 35.0%
! TGAAATTTGGTTCGATTGGT+GGG + chr3_3:90231012-90231031 None:intergenic 35.0%
! TTGAAATTTGGTTCGATTGG+TGG + chr3_3:90231013-90231032 None:intergenic 35.0%
ATTAACCTCTTGAATCACCA+GGG - chr3_3:90231127-90231146 Msa0482790:CDS 35.0%
! TTCACAATCTCCTTAGTCTT+AGG + chr3_3:90231187-90231206 None:intergenic 35.0%
!!! AGTCAATTGGATGTTTTGAC+TGG - chr3_3:90231268-90231287 Msa0482790:intron 35.0%
!!! GATGTTTTGACTGGAAATCA+AGG - chr3_3:90231277-90231296 Msa0482790:intron 35.0%
! GTAGTTTTTCTCAATGGGAT+TGG + chr3_3:90231519-90231538 None:intergenic 35.0%
ATCCCATTGAGAAAAACTAC+TGG - chr3_3:90231519-90231538 Msa0482790:intron 35.0%
! AGCCAGTAGTTTTTCTCAAT+GGG + chr3_3:90231524-90231543 None:intergenic 35.0%
! AAGCCAGTAGTTTTTCTCAA+TGG + chr3_3:90231525-90231544 None:intergenic 35.0%
!! GAAAAACTACTGGCTTAAGT+AGG - chr3_3:90231529-90231548 Msa0482790:intron 35.0%
! ACTGGCTTAAGTAGGTAATA+AGG - chr3_3:90231537-90231556 Msa0482790:intron 35.0%
CTGGCTTAAGTAGGTAATAA+GGG - chr3_3:90231538-90231557 Msa0482790:intron 35.0%
ATAAGTGGCTAATGAGAGTA+TGG - chr3_3:90231620-90231639 Msa0482790:intron 35.0%
ACTCAAGACCTTCAAAAAAG+AGG + chr3_3:90231707-90231726 None:intergenic 35.0%
ATCGTGAATTCGTTTGTGTA+AGG + chr3_3:90231871-90231890 None:intergenic 35.0%
TCTACCAATTTCCAACTCTT+TGG + chr3_3:90232024-90232043 None:intergenic 35.0%
CATCCACATGAGAAAATCAT+AGG - chr3_3:90232048-90232067 Msa0482790:CDS 35.0%
! CTTCCTATGATTTTCTCATG+TGG + chr3_3:90232054-90232073 None:intergenic 35.0%
ATATGAGTCAAACATGTCCA+TGG - chr3_3:90232110-90232129 Msa0482790:CDS 35.0%
TCATTCTGAACCAAAATCCA+TGG - chr3_3:90232137-90232156 Msa0482790:intron 35.0%
! ATGACTTCATCCATGGATTT+TGG + chr3_3:90232150-90232169 None:intergenic 35.0%
ATCAATGATGACTTCATCCA+TGG + chr3_3:90232157-90232176 None:intergenic 35.0%
AACTACGAGGATTAGAAACA+AGG + chr3_3:90232239-90232258 None:intergenic 35.0%
!! TTGATGATGGTTTAACTACG+AGG + chr3_3:90232252-90232271 None:intergenic 35.0%
ATCAGAAACAATGCTAGACT+TGG - chr3_3:90232316-90232335 Msa0482790:intron 35.0%
CAAGGCTACAATCAATATGA+TGG - chr3_3:90232341-90232360 Msa0482790:intron 35.0%
! ACACTTTTACACAAGTAGCA+AGG - chr3_3:90232378-90232397 Msa0482790:intron 35.0%
TTCTCTTGATTGATGAATCC+AGG + chr3_3:90232527-90232546 None:intergenic 35.0%
AGATAAATATGCAAACGGGT+AGG - chr3_3:90232995-90233014 Msa0482790:intron 35.0%
CAGTTCTGTGTGGTTTAAAA+TGG - chr3_3:90233054-90233073 Msa0482790:intron 35.0%
! TCTGTGTGGTTTAAAATGGT+CGG - chr3_3:90233058-90233077 Msa0482790:intron 35.0%
TTAATCTAACGGTGCTTGTT+CGG + chr3_3:90233126-90233145 None:intergenic 35.0%
GTGAGAGAATAACAGTAGAA+AGG + chr3_3:90233238-90233257 None:intergenic 35.0%
GAAAATATGAGAAAGAGGAG+CGG + chr3_3:90233346-90233365 None:intergenic 35.0%
!! ATCTAGCCAAGTATTGATGA+AGG - chr3_3:90233476-90233495 Msa0482790:intron 35.0%
!! TCTAGCCAAGTATTGATGAA+GGG - chr3_3:90233477-90233496 Msa0482790:intron 35.0%
AACATCCCTTCATCAATACT+TGG + chr3_3:90233485-90233504 None:intergenic 35.0%
CAAAAACAAGTTAGCAGCTT+TGG + chr3_3:90233525-90233544 None:intergenic 35.0%
!!! TGGTTTTATTTCGGCATTCA+CGG - chr3_3:90233565-90233584 Msa0482790:intron 35.0%
CCTTGCAGATTTGATATCTT+CGG - chr3_3:90233695-90233714 Msa0482790:intron 35.0%
TCCATTGTATTCTCATGATG+CGG - chr3_3:90233788-90233807 Msa0482790:intron 35.0%
AGAAAATGGAGCAAAAACCA+AGG + chr3_3:90233853-90233872 None:intergenic 35.0%
!! TATAGTCATAACGGACATTC+TGG + chr3_3:90233880-90233899 None:intergenic 35.0%
! AGTTTGGGGTATAGTCATAA+CGG + chr3_3:90233889-90233908 None:intergenic 35.0%
AACCAGTAATGCAAACAAGT+GGG + chr3_3:90234088-90234107 None:intergenic 35.0%
TAACCAGTAATGCAAACAAG+TGG + chr3_3:90234089-90234108 None:intergenic 35.0%
! CTTGTTTGCATTACTGGTTA+AGG - chr3_3:90234089-90234108 Msa0482790:intron 35.0%
GATATCAAACTTCTCCTGTT+TGG - chr3_3:90234454-90234473 Msa0482790:intron 35.0%
CGAAGAAAGATAAAAGTGGT+GGG + chr3_3:90234522-90234541 None:intergenic 35.0%
TCAGCGAAGAAAGATAAAAG+TGG + chr3_3:90234526-90234545 None:intergenic 35.0%
AAATAAAAGGACCTTTCTCC+TGG + chr3_3:90234562-90234581 None:intergenic 35.0%
ATTGTATACATCTTCCGTTG+TGG - chr3_3:90234894-90234913 Msa0482790:intron 35.0%
!! AGTAGATTTGAGGTGTTGTT+TGG + chr3_3:90235181-90235200 None:intergenic 35.0%
GAAATAGGTGAGAGAGAATA+TGG + chr3_3:90235229-90235248 None:intergenic 35.0%
TTCTATTTCCTTCTCTCTCA+GGG + chr3_3:90235285-90235304 None:intergenic 35.0%
TTTCTATTTCCTTCTCTCTC+AGG + chr3_3:90235286-90235305 None:intergenic 35.0%
ATGTGTATACATGCACGTTA+TGG - chr3_3:90235460-90235479 Msa0482790:intron 35.0%
ATCTTATCTTGTCTCCTAGT+TGG - chr3_3:90235609-90235628 Msa0482790:intron 35.0%
! CTACTAACCCTTACCATTTT+TGG + chr3_3:90235748-90235767 None:intergenic 35.0%
!! GATGGATCGATTTTGTTGAA+CGG - chr3_3:90236416-90236435 Msa0482790:intron 35.0%
AAAATAGATGTAGAACCCGA+AGG + chr3_3:90236707-90236726 None:intergenic 35.0%
TGATCTTAGGACTAAAAGAG+CGG + chr3_3:90236861-90236880 None:intergenic 35.0%
! TGATGCACAAGTCTAAGATA+AGG + chr3_3:90236885-90236904 None:intergenic 35.0%
TAAAACATCTTTCGTAGCAC+TGG - chr3_3:90236994-90237013 Msa0482790:intron 35.0%
GCTCAAGTAGTTTATGTTGA+AGG - chr3_3:90237026-90237045 Msa0482790:intron 35.0%
GTAGTTTATGTTGAAGGAGT+TGG - chr3_3:90237032-90237051 Msa0482790:intron 35.0%
ATAGAGTAGTTGCTATAGCT+AGG + chr3_3:90237154-90237173 None:intergenic 35.0%
ATAATGCTAGGAATACGTAG+AGG + chr3_3:90237332-90237351 None:intergenic 35.0%
TTTGAATTTGTACAGCTTGG+AGG - chr3_3:90237385-90237404 Msa0482790:CDS 35.0%
TCCCAATGGTACATCAAAAT+CGG + chr3_3:90237413-90237432 None:intergenic 35.0%
TCCAGTACCATTTGAAAGAA+CGG - chr3_3:90237477-90237496 Msa0482790:CDS 35.0%
TGTTCATCCGTTCTTTCAAA+TGG + chr3_3:90237487-90237506 None:intergenic 35.0%
GATTGAATAGTGTAGGACAA+TGG + chr3_3:90237588-90237607 None:intergenic 35.0%
ATGGTTCGATTGAATAGTGT+AGG + chr3_3:90237595-90237614 None:intergenic 35.0%
!! TATTGGTGGGTTTGTATCAA+TGG + chr3_3:90237614-90237633 None:intergenic 35.0%
TGAAATTTGGGTCTATTGGT+GGG + chr3_3:90237627-90237646 None:intergenic 35.0%
TTGAAATTTGGGTCTATTGG+TGG + chr3_3:90237628-90237647 None:intergenic 35.0%
GTGTTCAGTGATTGATCATT+CGG + chr3_3:90237673-90237692 None:intergenic 35.0%
! TTCACAATCTCCTTAGTCTT+AGG + chr3_3:90231187-90231206 None:intergenic 35.0%
TACGCAATAAAGGACATCGA+GGG + chr3_3:90230757-90230776 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG + chr3_3:90230758-90230777 None:intergenic 40.0%
AGTTCATCTGTTCGTGCAAA+TGG + chr3_3:90230872-90230891 None:intergenic 40.0%
ACCAGATAGAGCAACTACAT+CGG + chr3_3:90230930-90230949 None:intergenic 40.0%
! ATGAGCTTGACCAAAAGTGT+GGG + chr3_3:90230954-90230973 None:intergenic 40.0%
AATGAGCTTGACCAAAAGTG+TGG + chr3_3:90230955-90230974 None:intergenic 40.0%
! ATCCAAATTAACGGCGTTGA+GGG + chr3_3:90231071-90231090 None:intergenic 40.0%
CATTAACCTCTTGAATCACC+AGG - chr3_3:90231126-90231145 Msa0482790:CDS 40.0%
GTTTACATCGGATCAAGACT+TGG - chr3_3:90231153-90231172 Msa0482790:intron 40.0%
!! CTTTCTGGTTAGAAGCAAAG+AGG + chr3_3:90231210-90231229 None:intergenic 40.0%
! GAAATCTAAGGTGGCATCTA+TGG - chr3_3:90231336-90231355 Msa0482790:intron 40.0%
ATAGACTTGTGTGCACAATG+TGG + chr3_3:90231650-90231669 None:intergenic 40.0%
CCAATTTCCAACTCTTTGGA+GGG + chr3_3:90232020-90232039 None:intergenic 40.0%
ACCAATTTCCAACTCTTTGG+AGG + chr3_3:90232021-90232040 None:intergenic 40.0%
TGGTTCAGAATGAGATACCA+TGG + chr3_3:90232130-90232149 None:intergenic 40.0%
ATGGGTGCCAAAAACAAGTT+TGG - chr3_3:90232277-90232296 Msa0482790:intron 40.0%
GTTTATGTTCATCAACCACC+TGG - chr3_3:90232506-90232525 Msa0482790:intron 40.0%
TCTTGATTGATGAATCCAGG+TGG + chr3_3:90232524-90232543 None:intergenic 40.0%
!!! TCATATAGAGCTTTTGGAGC+TGG + chr3_3:90232596-90232615 None:intergenic 40.0%
AAATGGTCGGTATCAGTTGT+TGG - chr3_3:90233071-90233090 Msa0482790:intron 40.0%
! TTAGATGCACTCTCTGGAAA+AGG - chr3_3:90233179-90233198 Msa0482790:intron 40.0%
! TAGATGCACTCTCTGGAAAA+GGG - chr3_3:90233180-90233199 Msa0482790:intron 40.0%
AAAAGGGGAGATGATTGATG+CGG + chr3_3:90233420-90233439 None:intergenic 40.0%
AAATCTGCAAGGAACCGAAA+AGG + chr3_3:90233687-90233706 None:intergenic 40.0%
CCGAAGATATCAAATCTGCA+AGG + chr3_3:90233698-90233717 None:intergenic 40.0%
AATTAGGACTGAGCATCAGA+CGG + chr3_3:90233738-90233757 None:intergenic 40.0%
CCATTGTATTCTCATGATGC+GGG - chr3_3:90233789-90233808 Msa0482790:intron 40.0%
CATTGTATTCTCATGATGCG+GGG - chr3_3:90233790-90233809 Msa0482790:intron 40.0%
TACTTCCTACTTCGCATCAT+GGG + chr3_3:90233823-90233842 None:intergenic 40.0%
GACATTCTGGTGAGAGAAAA+TGG + chr3_3:90233867-90233886 None:intergenic 40.0%
! GGTTACTAGTTGTCTAGTTC+AGG - chr3_3:90233942-90233961 Msa0482790:intron 40.0%
! TACTAGTTGTCTAGTTCAGG+TGG - chr3_3:90233945-90233964 Msa0482790:intron 40.0%
! CCTTTTCTCTTGCATGTTCA+TGG + chr3_3:90233975-90233994 None:intergenic 40.0%
CCATGAACATGCAAGAGAAA+AGG - chr3_3:90233972-90233991 Msa0482790:intron 40.0%
TGAACATGCAAGAGAAAAGG+AGG - chr3_3:90233975-90233994 Msa0482790:intron 40.0%
GAACATGCAAGAGAAAAGGA+GGG - chr3_3:90233976-90233995 Msa0482790:intron 40.0%
GAATGAGTCGATCGTACTTA+AGG + chr3_3:90234016-90234035 None:intergenic 40.0%
! ACGATCGACTCATTCCTTAT+TGG - chr3_3:90234021-90234040 Msa0482790:intron 40.0%
GAAACTGCTGAGAGAGAAAT+TGG - chr3_3:90234428-90234447 Msa0482790:intron 40.0%
TCAAACTTCTCCTGTTTGGT+AGG - chr3_3:90234458-90234477 Msa0482790:intron 40.0%
TATTTCTTGGCCTACCAAAC+AGG + chr3_3:90234471-90234490 None:intergenic 40.0%
GTTTGGTAGGCCAAGAAATA+AGG - chr3_3:90234471-90234490 Msa0482790:intron 40.0%
GCGAAGAAAGATAAAAGTGG+TGG + chr3_3:90234523-90234542 None:intergenic 40.0%
AAATGAGGAAAGGGTGACAA+GGG + chr3_3:90234602-90234621 None:intergenic 40.0%
AAAATGAGGAAAGGGTGACA+AGG + chr3_3:90234603-90234622 None:intergenic 40.0%
!! TTCTGGAATGCACAAGTTGA+AGG + chr3_3:90235533-90235552 None:intergenic 40.0%
! GAGATTTGGAACAACCAACT+AGG + chr3_3:90235626-90235645 None:intergenic 40.0%
! GAGCACATGCATTTGAGATT+TGG + chr3_3:90235640-90235659 None:intergenic 40.0%
AGTGGTCTCTTTGCACAATA+TGG + chr3_3:90235662-90235681 None:intergenic 40.0%
! AGGCCTTGATAATCTCTTAG+AGG + chr3_3:90235836-90235855 None:intergenic 40.0%
CAATCTAGTCCCCTCATAAT+GGG + chr3_3:90235859-90235878 None:intergenic 40.0%
! CTATTGGTTGTCATGTCCTA+AGG - chr3_3:90235885-90235904 Msa0482790:intron 40.0%
GTCATGTCCTAAGGATTGTA+AGG - chr3_3:90235894-90235913 Msa0482790:intron 40.0%
GATGGAACCTTACAATCCTT+AGG + chr3_3:90235904-90235923 None:intergenic 40.0%
GAATTGAAACAGGGATGTGA+TGG - chr3_3:90236398-90236417 Msa0482790:intron 40.0%
! TCGATTTTGTTGAACGGTGT+TGG - chr3_3:90236422-90236441 Msa0482790:intron 40.0%
TTGAATAGCCTCTTCCCTTA+AGG + chr3_3:90236483-90236502 None:intergenic 40.0%
! TAGAGCACGGAGATTTTCAA+GGG + chr3_3:90236507-90236526 None:intergenic 40.0%
! TTAGAGCACGGAGATTTTCA+AGG + chr3_3:90236508-90236527 None:intergenic 40.0%
ACTGTCTACGAATTAGAGCA+CGG + chr3_3:90236520-90236539 None:intergenic 40.0%
TAATTCGTAGACAGTGTCCA+CGG - chr3_3:90236525-90236544 Msa0482790:intron 40.0%
!! TGCCTCATTTTAAGGACACT+AGG - chr3_3:90236664-90236683 Msa0482790:intron 40.0%
CTCCTAGTGTCCTTAAAATG+AGG + chr3_3:90236669-90236688 None:intergenic 40.0%
GCATTTGTACACGAAACCTT+CGG - chr3_3:90236688-90236707 Msa0482790:intron 40.0%
CATTTGTACACGAAACCTTC+GGG - chr3_3:90236689-90236708 Msa0482790:intron 40.0%
TTGAAGAGACTAGTAGAGCT+CGG + chr3_3:90236820-90236839 None:intergenic 40.0%
! AGCTCTACTAGTCTCTTCAA+AGG - chr3_3:90236820-90236839 Msa0482790:intron 40.0%
!! ATCTTTCGTAGCACTGGTAT+TGG - chr3_3:90237000-90237019 Msa0482790:intron 40.0%
GAAGGAGTTGGAATAGTCAA+AGG - chr3_3:90237044-90237063 Msa0482790:intron 40.0%
CCAATGGTACATCAAAATCG+GGG + chr3_3:90237411-90237430 None:intergenic 40.0%
CCCAATGGTACATCAAAATC+GGG + chr3_3:90237412-90237431 None:intergenic 40.0%
!! CCCGATTTTGATGTACCATT+GGG - chr3_3:90237409-90237428 Msa0482790:intron 40.0%
! AATGGTACTGGAAGATTGTC+TGG + chr3_3:90237469-90237488 None:intergenic 40.0%
TCCGTTCTTTCAAATGGTAC+TGG + chr3_3:90237481-90237500 None:intergenic 40.0%
!! TAGTCTTAGGATGACTTGCT+AGG + chr3_3:90237789-90237808 None:intergenic 40.0%
AGCAAGTCATCCTAAGACTA+AGG - chr3_3:90237789-90237808 Msa0482790:CDS 40.0%
CCAATGGCACGTCAAAATCT+GGG + chr3_3:90230796-90230815 None:intergenic 45.0%
!! CCAGATTTTGACGTGCCATT+GGG - chr3_3:90230794-90230813 Msa0482790:CDS 45.0%
! AGGCTGTCTTTTCTTCCCAA+TGG + chr3_3:90230812-90230831 None:intergenic 45.0%
CTGTTCGTGCAAATGGTACT+GGG + chr3_3:90230865-90230884 None:intergenic 45.0%
TCTGTTCGTGCAAATGGTAC+TGG + chr3_3:90230866-90230885 None:intergenic 45.0%
ACCGATGTAGTTGCTCTATC+TGG - chr3_3:90230926-90230945 Msa0482790:CDS 45.0%
GTGGGTCGGATTCAATGATT+CGG + chr3_3:90230994-90231013 None:intergenic 45.0%
! ATTTGGTTCGATTGGTGGGT+CGG + chr3_3:90231008-90231027 None:intergenic 45.0%
CATCCAAATTAACGGCGTTG+AGG + chr3_3:90231072-90231091 None:intergenic 45.0%
TCACCAGGGTGTGTTTACAT+CGG - chr3_3:90231141-90231160 Msa0482790:intron 45.0%
GGCAAGTCATCCTAAGACTA+AGG - chr3_3:90231174-90231193 Msa0482790:intron 45.0%
! ATCTAAGGTGGCATCTATGG+TGG - chr3_3:90231339-90231358 Msa0482790:intron 45.0%
GAAACAACGACATCCCAACT+AGG + chr3_3:90231442-90231461 None:intergenic 45.0%
!! TTTTAGGTAAGGCAGGAGTG+TGG + chr3_3:90231479-90231498 None:intergenic 45.0%
GTTAGAACCCTCCAAAGAGT+TGG - chr3_3:90232010-90232029 Msa0482790:CDS 45.0%
CCCTCCAAAGAGTTGGAAAT+TGG - chr3_3:90232017-90232036 Msa0482790:CDS 45.0%
! GCACCCATCTTGTTTGATGA+TGG + chr3_3:90232265-90232284 None:intergenic 45.0%
ACAATGCTAGACTTGGCACA+AGG - chr3_3:90232323-90232342 Msa0482790:intron 45.0%
TCATAGCCTGCATTGCAAGT+AGG - chr3_3:90232926-90232945 Msa0482790:intron 45.0%
!!! ATACGGGTTTTTCGGGTTGT+AGG + chr3_3:90232975-90232994 None:intergenic 45.0%
TGCAAACGGGTAGGTTCAAT+CGG - chr3_3:90233004-90233023 Msa0482790:intron 45.0%
GTAGGTTCAATCGGGTTTGT+CGG - chr3_3:90233013-90233032 Msa0482790:intron 45.0%
AACTGTACCTTTCACCCGAT+GGG + chr3_3:90233039-90233058 None:intergenic 45.0%
! GTGAAAGGTACAGTTCTGTG+TGG - chr3_3:90233044-90233063 Msa0482790:intron 45.0%
GATGGTTTAGATGCACTCTC+TGG - chr3_3:90233173-90233192 Msa0482790:intron 45.0%
ATTAGGACTGAGCATCAGAC+GGG + chr3_3:90233737-90233756 None:intergenic 45.0%
CCCGCATCATGAGAATACAA+TGG + chr3_3:90233792-90233811 None:intergenic 45.0%
CTACTTCCTACTTCGCATCA+TGG + chr3_3:90233824-90233843 None:intergenic 45.0%
ATGCAAGAGAAAAGGAGGGT+GGG - chr3_3:90233980-90233999 Msa0482790:intron 45.0%
CAAGTGGGTGGAAAAGCTAT+TGG + chr3_3:90234073-90234092 None:intergenic 45.0%
CAGTAATGCAAACAAGTGGG+TGG + chr3_3:90234085-90234104 None:intergenic 45.0%
CACCCACTTGTTTGCATTAC+TGG - chr3_3:90234083-90234102 Msa0482790:intron 45.0%
! AGGGTGACAAGGGTATACAA+TGG + chr3_3:90234592-90234611 None:intergenic 45.0%
CTTCTCTCTCAGGGTATGTT+TGG + chr3_3:90235276-90235295 None:intergenic 45.0%
CAAACATACCCTGAGAGAGA+AGG - chr3_3:90235274-90235293 Msa0482790:intron 45.0%
AGATGGATATTGAGGGCTAG+TGG + chr3_3:90235680-90235699 None:intergenic 45.0%
TATCAAGGCCTCCCATTATG+AGG - chr3_3:90235845-90235864 Msa0482790:intron 45.0%
ATCAAGGCCTCCCATTATGA+GGG - chr3_3:90235846-90235865 Msa0482790:intron 45.0%
CCAATCTAGTCCCCTCATAA+TGG + chr3_3:90235860-90235879 None:intergenic 45.0%
CCATTATGAGGGGACTAGAT+TGG - chr3_3:90235857-90235876 Msa0482790:intron 45.0%
AAAAAGAGCCTGAGTATGCC+AGG + chr3_3:90235962-90235981 None:intergenic 45.0%
!! TTTCCATGACTGCTTTTCCC+AGG - chr3_3:90235979-90235998 Msa0482790:intron 45.0%
TTACCTGGGAAAAGCAGTCA+TGG + chr3_3:90235985-90236004 None:intergenic 45.0%
AATTCGTAGACAGTGTCCAC+GGG - chr3_3:90236526-90236545 Msa0482790:intron 45.0%
!! CCCCGATTTTGATGTACCAT+TGG - chr3_3:90237408-90237427 Msa0482790:intron 45.0%
GTGCAGTTGCATTGAAGGTT+AGG + chr3_3:90237447-90237466 None:intergenic 45.0%
GATCAGATGTAAACACACCC+TGG + chr3_3:90237762-90237781 None:intergenic 45.0%
!!! AAAATTATTGTTAATTTTTT+AGG + chr3_3:90231495-90231514 None:intergenic 5.0%
!! TTAAAAAAAATAAAACTATT+CGG + chr3_3:90234821-90234840 None:intergenic 5.0%
!!! AATAGTTTTATTTTTTTTAA+AGG - chr3_3:90234821-90234840 Msa0482790:intron 5.0%
!! TTATATTAAAAAAATAAAGA+TGG - chr3_3:90236290-90236309 Msa0482790:intron 5.0%
!! CCCAGATTTTGACGTGCCAT+TGG - chr3_3:90230793-90230812 Msa0482790:CDS 50.0%
CCCAATGGCACGTCAAAATC+TGG + chr3_3:90230797-90230816 None:intergenic 50.0%
! CTATCTGGTGCCCACACTTT+TGG - chr3_3:90230941-90230960 Msa0482790:CDS 50.0%
CGAAGCAACATGTCCGAATG+AGG - chr3_3:90231042-90231061 Msa0482790:CDS 50.0%
GTCCCTCAACGCCGTTAATT+TGG - chr3_3:90231066-90231085 Msa0482790:CDS 50.0%
ACACACCCTGGTGATTCAAG+AGG + chr3_3:90231135-90231154 None:intergenic 50.0%
GATCCGATGTAAACACACCC+TGG + chr3_3:90231147-90231166 None:intergenic 50.0%
! ATCTATGGTGGAAGAGGTGG+TGG - chr3_3:90231351-90231370 Msa0482790:intron 50.0%
CAACGACATCCCAACTAGGT+TGG + chr3_3:90231438-90231457 None:intergenic 50.0%
GAGTGTGGACAGACATCAAG+AGG + chr3_3:90231464-90231483 None:intergenic 50.0%
CATCGCGAGATAGAGCGATA+AGG + chr3_3:90232900-90232919 None:intergenic 50.0%
TATCGCTCTATCTCGCGATG+TGG - chr3_3:90232900-90232919 Msa0482790:intron 50.0%
ATCGCTCTATCTCGCGATGT+GGG - chr3_3:90232901-90232920 Msa0482790:intron 50.0%
CTCAGTCCTACTTGCAATGC+AGG + chr3_3:90232935-90232954 None:intergenic 50.0%
GCAAACGGGTAGGTTCAATC+GGG - chr3_3:90233005-90233024 Msa0482790:intron 50.0%
GAACTGTACCTTTCACCCGA+TGG + chr3_3:90233040-90233059 None:intergenic 50.0%
TCTAACGGTGCTTGTTCGGT+CGG + chr3_3:90233122-90233141 None:intergenic 50.0%
CATAGCCCATGATGCGAAGT+AGG - chr3_3:90233815-90233834 Msa0482790:intron 50.0%
! GTAGGAAGTAGCTGACTCCT+TGG - chr3_3:90233833-90233852 Msa0482790:intron 50.0%
CATGCAAGAGAAAAGGAGGG+TGG - chr3_3:90233979-90233998 Msa0482790:intron 50.0%
TGCGAAGAGATCCAGGAGAA+AGG - chr3_3:90234548-90234567 Msa0482790:intron 50.0%
GAGAACACAATGTCACCACG+AGG + chr3_3:90235489-90235508 None:intergenic 50.0%
TCAAGGCCTCCCATTATGAG+GGG - chr3_3:90235847-90235866 Msa0482790:intron 50.0%
! TCTAGTCCCCTCATAATGGG+AGG + chr3_3:90235856-90235875 None:intergenic 50.0%
! AAAGATAGTGGCCAAGCTCC+TGG - chr3_3:90235941-90235960 Msa0482790:intron 50.0%
ATCCTGCCAACTTCGCCTTA+AGG - chr3_3:90236465-90236484 Msa0482790:intron 50.0%
TCCTGCCAACTTCGCCTTAA+GGG - chr3_3:90236466-90236485 Msa0482790:intron 50.0%
CTCTTCCCTTAAGGCGAAGT+TGG + chr3_3:90236474-90236493 None:intergenic 50.0%
CAACTTCGCCTTAAGGGAAG+AGG - chr3_3:90236472-90236491 Msa0482790:intron 50.0%
AGGCTGTCTCTTCTTCCCAA+TGG + chr3_3:90237427-90237446 None:intergenic 50.0%
GTCTGGTGCAGTTGCATTGA+AGG + chr3_3:90237452-90237471 None:intergenic 50.0%
GCGTTGAGGGACTCCTCATT+CGG + chr3_3:90231058-90231077 None:intergenic 55.0%
! GGTGGCATCTATGGTGGAAG+AGG - chr3_3:90231345-90231364 Msa0482790:intron 55.0%
! GGCATCTATGGTGGAAGAGG+TGG - chr3_3:90231348-90231367 Msa0482790:intron 55.0%
TCGCTCTATCTCGCGATGTG+GGG - chr3_3:90232902-90232921 Msa0482790:intron 55.0%
!! TTTCGGGTTGTAGGCGGGTT+CGG + chr3_3:90232966-90232985 None:intergenic 55.0%
!!! GGGTTTTTCGGGTTGTAGGC+GGG + chr3_3:90232971-90232990 None:intergenic 55.0%
!!! CGGGTTTTTCGGGTTGTAGG+CGG + chr3_3:90232972-90232991 None:intergenic 55.0%
AATCGGGTTTGTCGGCCCAT+CGG - chr3_3:90233021-90233040 Msa0482790:intron 55.0%
CTAACGGTGCTTGTTCGGTC+GGG + chr3_3:90233121-90233140 None:intergenic 55.0%
ACGATTTGAGCGGGCGGTTT+GGG + chr3_3:90233598-90233617 None:intergenic 55.0%
!! GCGTCGGATTAGTCGGATGA+CGG + chr3_3:90233633-90233652 None:intergenic 55.0%
!! GTGTGAGGCGTCGGATTAGT+CGG + chr3_3:90233640-90233659 None:intergenic 55.0%
GACTAATCCGACGCCTCACA+CGG - chr3_3:90233639-90233658 Msa0482790:intron 55.0%
! ACTGAGCATCAGACGGGTTC+GGG + chr3_3:90233731-90233750 None:intergenic 55.0%
! GACTGAGCATCAGACGGGTT+CGG + chr3_3:90233732-90233751 None:intergenic 55.0%
GCTGATGTGCGAAGAGATCC+AGG - chr3_3:90234541-90234560 Msa0482790:intron 55.0%
TGCACGTTATGGAAGCCTCG+TGG - chr3_3:90235471-90235490 Msa0482790:intron 55.0%
TCCCTTAAGGCGAAGTTGGC+AGG + chr3_3:90236470-90236489 None:intergenic 55.0%
!!! CTTTCTGGGGCGCACACTTT+TGG - chr3_3:90237556-90237575 Msa0482790:CDS 55.0%
! TCACGGGGTGCCAACCTAGT+TGG - chr3_3:90231425-90231444 Msa0482790:intron 60.0%
! CACGGGGTGCCAACCTAGTT+GGG - chr3_3:90231426-90231445 Msa0482790:intron 60.0%
ATCGGGTTTGTCGGCCCATC+GGG - chr3_3:90233022-90233041 Msa0482790:intron 60.0%
TTGTCGGCCCATCGGGTGAA+AGG - chr3_3:90233029-90233048 Msa0482790:intron 60.0%
GGTGCTTGTTCGGTCGGGTA+CGG + chr3_3:90233116-90233135 None:intergenic 60.0%
! TTTGAGCGGGCGGTTTGGGT+CGG + chr3_3:90233594-90233613 None:intergenic 60.0%
GACGATTTGAGCGGGCGGTT+TGG + chr3_3:90233599-90233618 None:intergenic 60.0%
! AGTCGGATGACGGTTTGCGC+CGG + chr3_3:90233623-90233642 None:intergenic 60.0%
AATCCGACGCCTCACACGGT+CGG - chr3_3:90233643-90233662 Msa0482790:intron 60.0%
CAACCATCTCCGACCGTGTG+AGG + chr3_3:90233655-90233674 None:intergenic 60.0%
GCCAAGCTCCTGGCATACTC+AGG - chr3_3:90235951-90235970 Msa0482790:intron 60.0%
GCCTGAGTATGCCAGGAGCT+TGG + chr3_3:90235955-90235974 None:intergenic 60.0%
! TCCACGGGTTGTCTCGTGTG+CGG - chr3_3:90236541-90236560 Msa0482790:intron 60.0%
TGCGGACATACTCGTCCTCG+CGG - chr3_3:90236559-90236578 Msa0482790:intron 60.0%
GGCACGAGAAGCTGTTCGTC+AGG - chr3_3:90236580-90236599 Msa0482790:intron 60.0%
! TGCGCCGGCGACGATTTGAG+CGG + chr3_3:90233608-90233627 None:intergenic 65.0%
TCTCCGACCGTGTGAGGCGT+CGG + chr3_3:90233649-90233668 None:intergenic 65.0%
ACGCCTCACACGGTCGGAGA+TGG - chr3_3:90233649-90233668 Msa0482790:intron 65.0%
! AGCATCAGACGGGTTCGGGC+GGG + chr3_3:90233727-90233746 None:intergenic 65.0%
! GAGCATCAGACGGGTTCGGG+CGG + chr3_3:90233728-90233747 None:intergenic 65.0%
TCCGCACACGAGACAACCCG+TGG + chr3_3:90236545-90236564 None:intergenic 65.0%
GAACAGCTTCTCGTGCCGCG+AGG + chr3_3:90236577-90236596 None:intergenic 65.0%
CCGGCGACGATTTGAGCGGG+CGG + chr3_3:90233604-90233623 None:intergenic 70.0%
CCGCCCGCTCAAATCGTCGC+CGG - chr3_3:90233601-90233620 Msa0482790:intron 70.0%
! GCGCCGGCGACGATTTGAGC+GGG + chr3_3:90233607-90233626 None:intergenic 70.0%
! CAGACGGGTTCGGGCGGGAT+CGG + chr3_3:90233722-90233741 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 90230716 90237840 90230716 ID=Msa0482790;Name=Msa0482790
chr3_3 mRNA 90230716 90237840 90230716 ID=Msa0482790-mRNA-1;Parent=Msa0482790;Name=Msa0482790-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|1|1|5|0|447
chr3_3 exon 90237466 90237840 90237466 ID=Msa0482790-mRNA-1:exon:26358;Parent=Msa0482790-mRNA-1
chr3_3 exon 90237167 90237408 90237167 ID=Msa0482790-mRNA-1:exon:26357;Parent=Msa0482790-mRNA-1
chr3_3 exon 90232556 90232649 90232556 ID=Msa0482790-mRNA-1:exon:26356;Parent=Msa0482790-mRNA-1
chr3_3 exon 90231955 90232146 90231955 ID=Msa0482790-mRNA-1:exon:26355;Parent=Msa0482790-mRNA-1
chr3_3 exon 90230716 90231156 90230716 ID=Msa0482790-mRNA-1:exon:26354;Parent=Msa0482790-mRNA-1
chr3_3 CDS 90237466 90237840 90237466 ID=Msa0482790-mRNA-1:cds;Parent=Msa0482790-mRNA-1
chr3_3 CDS 90237167 90237408 90237167 ID=Msa0482790-mRNA-1:cds;Parent=Msa0482790-mRNA-1
chr3_3 CDS 90232556 90232649 90232556 ID=Msa0482790-mRNA-1:cds;Parent=Msa0482790-mRNA-1
chr3_3 CDS 90231955 90232146 90231955 ID=Msa0482790-mRNA-1:cds;Parent=Msa0482790-mRNA-1
chr3_3 CDS 90230716 90231156 90230716 ID=Msa0482790-mRNA-1:cds;Parent=Msa0482790-mRNA-1
Gene Sequence

>Msa0482790

ATGGTTAAAAGTTTGAGAAATATTAATGTTGAATTTGTCCCTCGATGTCCTTTATTGCGTAACATAATATTTGAAGGCCCAGATTTTGACGTGCCATTGGGAAGAAAAGACAGCCTAAACTTCAGTGTAAATGCAGGAGATAATCTCCCAGTACCATTTGCACGAACAGATGAACTATTAACCGTTTTCGGATCAAAAAAATTCGATGCAACCGATGTAGTTGCTCTATCTGGTGCCCACACTTTTGGTCAAGCTCATTGTCCAACAATGTTCAACCGAATCATTGAATCCGACCCACCAATCGAACCAAATTTCAAGAAACAACTCGAAGCAACATGTCCGAATGAGGAGTCCCTCAACGCCGTTAATTTGGATGGTGTGTTTACATCGGATCAAGACTTGGCAAGTCATCCTAAGACTAAGGAGATTGTGAACCTCTTTGCTTCTAACCAGAAAGAGTTTTTTAACAAATTTGCTAATGCTTTTGTTAAGGTTAGTCAATTGGATGTTTTGACTGGAAATCAAGGAGAAATTCGTAAGTCATGTTTTGCTCCAAATAATAGGAAATCTAAGGTGGCATCTATGGTGGAAGAGGTGGTGGAAATTGCAGCAAACATGATTGTAAGGTTCCATCTTGAAGATGTGTTTGAAAAAGATAGTGGCCAAGCTCCTGGCATACTCAGGCTCTTTTTCCATGACTGCTTTTCCCAGGGATGTGATGGATCGATTTTGTTGAACGGTGTTGGAGAAGATGACGAAAAACAACATCCTGCCAACTTCGCCTTAAGGGAAGAGGCTATTCAAACCCTTGAAAATCTCCGTGCTCTAATTCGTAGACAGTGTCCACGGGTTGTCTCGTGTGCGGACATACTCGTCCTCGCGGCACGAGAAGCTGTTCGTCAGCTTGGAGGCCCCGATTTTGATGTACCATTGGGAAGAAGAGACAGCCTAACCTTCAATGCAACTGCACCAGACAATCTTCCAGTACCATTTGAAAGAACGGATGAACAATTAAGACTTTTTCAATCCAGAAAATTTGATGCCACATATTTAGTTGCTCTTTCTGGGGCGCACACTTTTGGTCGATCCCATTGTCCTACACTATTCAATCGAACCATTGATACAAACCCACCAATAGACCCAAATTTCAAGAAACAACTCGAAGCGACATGTCCGAATGATCAATCACTGAACACAATTAACTTGGATATTAGAACACCAACGAAATTCGATAACATGTACTATATTAATCTCTTGAATCACCAGGGTGTGTTTACATCTGATCAAGACCTAGCAAGTCATCCTAAGACTAAGGAGATTGTGAACCTCTTTGCTTCTAACTAG
Protein sequence

>Msa0482790

MVKSLRNINVEFVPRCPLLRNIIFEGPDFDVPLGRKDSLNFSVNAGDNLPVPFARTDELLTVFGSKKFDATDVVALSGAHTFGQAHCPTMFNRIIESDPPIEPNFKKQLEATCPNEESLNAVNLDGVFTSDQDLASHPKTKEIVNLFASNQKEFFNKFANAFVKVSQLDVLTGNQGEIRKSCFAPNNRKSKVASMVEEVVEIAANMIVRFHLEDVFEKDSGQAPGILRLFFHDCFSQGCDGSILLNGVGEDDEKQHPANFALREEAIQTLENLRALIRRQCPRVVSCADILVLAAREAVRQLGGPDFDVPLGRRDSLTFNATAPDNLPVPFERTDEQLRLFQSRKFDATYLVALSGAHTFGRSHCPTLFNRTIDTNPPIDPNFKKQLEATCPNDQSLNTINLDIRTPTKFDNMYYINLLNHQGVFTSDQDLASHPKTKEIVNLFASN*