Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483080 | TKY46054.1 | 40.816 | 245 | 81 | 3 | 2 | 184 | 263 | 505 | 1.19e-48 | 179 |
| Msa0483080 | TKY46054.1 | 40.833 | 120 | 51 | 2 | 83 | 184 | 88 | 205 | 5.61e-18 | 93.2 |
| Msa0483080 | TKY46054.1 | 61.446 | 83 | 31 | 1 | 2 | 83 | 563 | 645 | 3.20e-20 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483080 | sp|P84516|PER1_SORBI | 46.739 | 92 | 45 | 1 | 2 | 89 | 268 | 359 | 4.58e-20 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483080 | A0A072U9H8 | 63.636 | 121 | 25 | 2 | 83 | 184 | 81 | 201 | 1.29e-42 | 155 |
| Msa0483080 | A0A072U9H8 | 97.590 | 83 | 2 | 0 | 1 | 83 | 258 | 340 | 1.02e-47 | 169 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022900 | Msa0483080 | 0.827706 | 1.349410e-54 | -8.615850e-47 |
| Msa0439000 | Msa0483080 | 0.857503 | 1.561450e-62 | -8.615850e-47 |
| Msa0439360 | Msa0483080 | 0.808907 | 2.458399e-50 | -8.615850e-47 |
| Msa0439370 | Msa0483080 | 0.943804 | 6.205635e-103 | -8.615850e-47 |
| Msa0481570 | Msa0483080 | 0.861475 | 9.996450e-64 | -8.615850e-47 |
| Msa0326770 | Msa0483080 | 0.824070 | 9.851385e-54 | -8.615850e-47 |
| Msa0482790 | Msa0483080 | 0.821924 | 3.117538e-53 | -8.615850e-47 |
| Msa0483080 | Msa0777260 | 0.833529 | 5.061036e-56 | -8.615850e-47 |
| Msa0483080 | Msa0913550 | 0.802826 | 4.666585e-49 | -8.615850e-47 |
| Msa0483080 | Msa0951150 | 0.843518 | 1.334221e-58 | -8.615850e-47 |
| Msa0483080 | Msa0987640 | 0.802996 | 4.303708e-49 | -8.615850e-47 |
| Msa0483080 | Msa1365450 | 0.878571 | 2.522178e-69 | -8.615850e-47 |
| Msa0483080 | Msa1383560 | 0.813425 | 2.575919e-51 | -8.615850e-47 |
| Msa0483080 | Msa1445890 | 0.823739 | 1.177450e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483080 | MtrunA17_Chr6g0467251 | 97.590 | 83 | 2 | 0 | 1 | 83 | 258 | 340 | 1.96e-51 | 169 |
| Msa0483080 | MtrunA17_Chr6g0467251 | 63.636 | 121 | 25 | 2 | 83 | 184 | 81 | 201 | 2.49e-46 | 155 |
| Msa0483080 | MtrunA17_Chr5g0423911 | 89.333 | 75 | 8 | 0 | 1 | 75 | 1 | 75 | 1.98e-42 | 139 |
| Msa0483080 | MtrunA17_Chr6g0467161 | 42.017 | 119 | 51 | 1 | 84 | 184 | 91 | 209 | 7.93e-27 | 104 |
| Msa0483080 | MtrunA17_Chr6g0467161 | 56.944 | 72 | 31 | 0 | 2 | 73 | 267 | 338 | 8.56e-20 | 85.5 |
| Msa0483080 | MtrunA17_Chr6g0467121 | 59.302 | 86 | 34 | 1 | 2 | 86 | 294 | 379 | 3.59e-25 | 100 |
| Msa0483080 | MtrunA17_Chr6g0467121 | 40.000 | 120 | 52 | 2 | 83 | 184 | 119 | 236 | 5.90e-25 | 100 |
| Msa0483080 | MtrunA17_Chr4g0072091 | 51.429 | 70 | 34 | 0 | 2 | 71 | 254 | 323 | 1.97e-14 | 70.5 |
| Msa0483080 | MtrunA17_Chr2g0292271 | 46.429 | 84 | 43 | 1 | 2 | 83 | 259 | 342 | 3.93e-14 | 70.1 |
| Msa0483080 | MtrunA17_Chr2g0292151 | 41.935 | 93 | 50 | 2 | 2 | 90 | 259 | 351 | 5.13e-14 | 69.7 |
| Msa0483080 | MtrunA17_Chr2g0292211 | 42.553 | 94 | 48 | 2 | 2 | 89 | 270 | 363 | 2.72e-13 | 67.4 |
| Msa0483080 | MtrunA17_Chr2g0292211 | 33.333 | 123 | 59 | 4 | 83 | 184 | 85 | 205 | 4.93e-12 | 63.9 |
| Msa0483080 | MtrunA17_Chr2g0292111 | 44.872 | 78 | 41 | 1 | 2 | 77 | 259 | 336 | 4.80e-13 | 66.6 |
| Msa0483080 | MtrunA17_Chr2g0291751 | 42.553 | 94 | 49 | 3 | 2 | 90 | 259 | 352 | 6.23e-13 | 66.6 |
| Msa0483080 | MtrunA17_Chr2g0292091 | 48.529 | 68 | 33 | 1 | 2 | 67 | 254 | 321 | 1.19e-12 | 65.5 |
| Msa0483080 | MtrunA17_Chr2g0292091 | 34.146 | 123 | 58 | 4 | 83 | 184 | 69 | 189 | 2.66e-11 | 61.6 |
| Msa0483080 | MtrunA17_Chr2g0292241 | 50.000 | 68 | 32 | 1 | 2 | 67 | 259 | 326 | 1.41e-12 | 65.5 |
| Msa0483080 | MtrunA17_Chr2g0292241 | 34.146 | 123 | 58 | 4 | 83 | 184 | 74 | 194 | 2.24e-12 | 64.7 |
| Msa0483080 | MtrunA17_Chr1g0197411 | 48.485 | 66 | 34 | 0 | 2 | 67 | 261 | 326 | 1.46e-12 | 65.5 |
| Msa0483080 | MtrunA17_Chr2g0292281 | 48.529 | 68 | 33 | 1 | 2 | 67 | 145 | 212 | 1.58e-12 | 64.3 |
| Msa0483080 | MtrunA17_Chr3g0129051 | 44.286 | 70 | 39 | 0 | 2 | 71 | 253 | 322 | 1.70e-12 | 65.1 |
| Msa0483080 | MtrunA17_Chr1g0188431 | 46.269 | 67 | 36 | 0 | 1 | 67 | 257 | 323 | 3.23e-12 | 64.3 |
| Msa0483080 | MtrunA17_Chr2g0292261 | 40.659 | 91 | 52 | 1 | 2 | 90 | 259 | 349 | 4.34e-12 | 63.9 |
| Msa0483080 | MtrunA17_Chr2g0292251 | 41.935 | 93 | 47 | 3 | 2 | 87 | 258 | 350 | 4.64e-12 | 63.9 |
| Msa0483080 | MtrunA17_Chr2g0292251 | 33.607 | 122 | 58 | 4 | 84 | 184 | 74 | 193 | 4.60e-11 | 61.2 |
| Msa0483080 | MtrunA17_Chr2g0292291 | 48.529 | 68 | 33 | 1 | 2 | 67 | 261 | 328 | 5.70e-12 | 63.5 |
| Msa0483080 | MtrunA17_Chr3g0128061 | 48.485 | 66 | 34 | 0 | 2 | 67 | 257 | 322 | 5.99e-12 | 63.5 |
| Msa0483080 | MtrunA17_Chr7g0254231 | 46.970 | 66 | 35 | 0 | 2 | 67 | 242 | 307 | 6.15e-12 | 63.5 |
| Msa0483080 | MtrunA17_Chr6g0477071 | 45.455 | 66 | 36 | 0 | 2 | 67 | 273 | 338 | 9.40e-12 | 63.2 |
| Msa0483080 | MtrunA17_Chr2g0322861 | 31.667 | 120 | 61 | 3 | 84 | 184 | 133 | 250 | 1.28e-11 | 62.8 |
| Msa0483080 | MtrunA17_Chr7g0268491 | 41.429 | 70 | 40 | 1 | 2 | 71 | 29 | 97 | 3.24e-11 | 57.8 |
| Msa0483080 | MtrunA17_Chr5g0405991 | 45.455 | 66 | 32 | 2 | 2 | 67 | 251 | 312 | 3.30e-11 | 61.2 |
| Msa0483080 | MtrunA17_Chr1g0175561 | 45.588 | 68 | 35 | 1 | 2 | 67 | 255 | 322 | 3.33e-11 | 61.2 |
| Msa0483080 | MtrunA17_Chr1g0164891 | 46.269 | 67 | 36 | 0 | 1 | 67 | 322 | 388 | 4.10e-11 | 61.2 |
| Msa0483080 | MtrunA17_Chr7g0254201 | 41.667 | 72 | 42 | 0 | 2 | 73 | 243 | 314 | 4.14e-11 | 61.2 |
| Msa0483080 | MtrunA17_Chr2g0292181 | 34.737 | 95 | 60 | 1 | 2 | 94 | 268 | 362 | 4.68e-11 | 61.2 |
| Msa0483080 | MtrunA17_Chr3g0136751 | 41.429 | 70 | 41 | 0 | 2 | 71 | 253 | 322 | 5.25e-11 | 60.8 |
| Msa0483080 | MtrunA17_Chr2g0299691 | 42.254 | 71 | 36 | 1 | 2 | 67 | 284 | 354 | 5.56e-11 | 60.8 |
| Msa0483080 | MtrunA17_Chr1g0181511 | 42.424 | 66 | 38 | 0 | 2 | 67 | 254 | 319 | 6.57e-11 | 60.5 |
| Msa0483080 | MtrunA17_Chr2g0292101 | 32.520 | 123 | 60 | 4 | 83 | 184 | 70 | 190 | 6.62e-11 | 60.5 |
| Msa0483080 | MtrunA17_Chr3g0129061 | 40.000 | 70 | 42 | 0 | 2 | 71 | 253 | 322 | 8.75e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483080 | AT1G71695.1 | 47.727 | 88 | 44 | 1 | 2 | 89 | 270 | 355 | 3.06e-19 | 84.7 |
| Msa0483080 | AT1G71695.1 | 37.398 | 123 | 56 | 3 | 83 | 184 | 89 | 211 | 4.79e-17 | 78.6 |
| Msa0483080 | AT2G24800.1 | 42.857 | 70 | 40 | 0 | 2 | 71 | 260 | 329 | 3.72e-14 | 70.1 |
| Msa0483080 | AT4G08770.1 | 41.860 | 86 | 46 | 2 | 2 | 84 | 255 | 339 | 1.93e-13 | 68.2 |
| Msa0483080 | AT5G15180.1 | 35.000 | 120 | 57 | 3 | 84 | 184 | 78 | 195 | 7.50e-13 | 66.6 |
| Msa0483080 | AT3G21770.1 | 33.058 | 121 | 60 | 3 | 83 | 184 | 74 | 192 | 1.08e-12 | 66.2 |
| Msa0483080 | AT4G08780.1 | 39.535 | 86 | 48 | 2 | 2 | 84 | 255 | 339 | 1.96e-12 | 65.5 |
| Msa0483080 | AT2G18140.1 | 41.667 | 72 | 41 | 1 | 2 | 72 | 265 | 336 | 2.71e-12 | 65.1 |
| Msa0483080 | AT3G28200.1 | 46.479 | 71 | 38 | 0 | 1 | 71 | 246 | 316 | 2.79e-12 | 64.7 |
| Msa0483080 | AT5G19880.1 | 45.588 | 68 | 35 | 1 | 2 | 67 | 258 | 325 | 3.74e-12 | 64.7 |
| Msa0483080 | AT5G40150.1 | 46.479 | 71 | 38 | 0 | 1 | 71 | 258 | 328 | 3.91e-12 | 64.3 |
| Msa0483080 | AT3G17070.2 | 42.424 | 66 | 38 | 0 | 2 | 67 | 207 | 272 | 5.09e-12 | 63.9 |
| Msa0483080 | AT2G38390.1 | 45.946 | 74 | 38 | 1 | 2 | 73 | 262 | 335 | 5.88e-12 | 63.9 |
| Msa0483080 | AT4G36430.1 | 43.284 | 67 | 37 | 1 | 2 | 67 | 260 | 326 | 6.23e-12 | 63.9 |
| Msa0483080 | AT3G17070.1 | 42.424 | 66 | 38 | 0 | 2 | 67 | 270 | 335 | 8.18e-12 | 63.5 |
| Msa0483080 | AT4G31760.1 | 40.000 | 70 | 42 | 0 | 2 | 71 | 257 | 326 | 8.72e-12 | 63.5 |
| Msa0483080 | AT2G18150.1 | 40.278 | 72 | 42 | 1 | 2 | 72 | 266 | 337 | 1.37e-11 | 62.8 |
| Msa0483080 | AT5G58400.1 | 38.571 | 70 | 43 | 0 | 2 | 71 | 256 | 325 | 2.37e-11 | 62.4 |
| Msa0483080 | AT5G14130.1 | 42.857 | 70 | 40 | 0 | 2 | 71 | 261 | 330 | 3.04e-11 | 62.0 |
| Msa0483080 | AT5G14130.2 | 42.857 | 70 | 40 | 0 | 2 | 71 | 302 | 371 | 3.05e-11 | 62.0 |
| Msa0483080 | AT5G66390.1 | 43.284 | 67 | 37 | 1 | 2 | 67 | 263 | 329 | 3.13e-11 | 62.0 |
| Msa0483080 | AT1G30870.1 | 42.667 | 75 | 40 | 2 | 2 | 73 | 273 | 347 | 3.33e-11 | 62.0 |
| Msa0483080 | AT1G24110.1 | 40.541 | 74 | 44 | 0 | 1 | 74 | 252 | 325 | 4.35e-11 | 61.6 |
| Msa0483080 | AT2G38380.1 | 43.243 | 74 | 40 | 1 | 2 | 73 | 262 | 335 | 5.02e-11 | 61.2 |
| Msa0483080 | AT5G06730.1 | 41.026 | 78 | 44 | 1 | 2 | 77 | 263 | 340 | 9.45e-11 | 60.5 |
Find 46 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATATTTAGTTGCTCTTTC+TGG | 0.065830 | 3_3:-90812523 | Msa0483080:CDS |
| ACCTTAGATTTCCTATTATT+TGG | 0.128939 | 3_3:+90818732 | None:intergenic |
| TCTTTCTGGGCGCACACTTT+TGG | 0.278554 | 3_3:-90812509 | Msa0483080:CDS |
| CATATTTAGTTGCTCTTTCT+GGG | 0.293170 | 3_3:-90812522 | Msa0483080:CDS |
| TATTGGTGGGTTTGTATCAA+TGG | 0.316149 | 3_3:+90812454 | None:intergenic |
| GAAATCTAAGGTGGCATCTA+TGG | 0.324726 | 3_3:-90818721 | Msa0483080:CDS |
| TTCACAATCTCCTTAGTCTT+AGG | 0.327909 | 3_3:+90818873 | None:intergenic |
| TCCCAATGGTACATCAAAAT+CGG | 0.361315 | 3_3:+90812654 | None:intergenic |
| TCCAAATAATAGGAAATCTA+AGG | 0.367020 | 3_3:-90818733 | Msa0483080:CDS |
| TCCTGCCAACTTCGCCTTAA+GGG | 0.372726 | 3_3:-90813597 | Msa0483080:CDS |
| TTGAAATTTGGGTCTATTGG+TGG | 0.400100 | 3_3:+90812440 | None:intergenic |
| TTGAATAGCCTCTTCCCTTA+AGG | 0.400879 | 3_3:+90813583 | None:intergenic |
| TCCCTTAAGGCGAAGTTGGC+AGG | 0.412132 | 3_3:+90813596 | None:intergenic |
| GTGCAGTTGCATTGAAGGTT+AGG | 0.416101 | 3_3:+90812620 | None:intergenic |
| CCCAATGGTACATCAAAATC+GGG | 0.416121 | 3_3:+90812655 | None:intergenic |
| GTCTGGTGCAGTTGCATTGA+AGG | 0.420651 | 3_3:+90812615 | None:intergenic |
| TCCGTTCTTTCAAATGGTAC+TGG | 0.425247 | 3_3:+90812586 | None:intergenic |
| TGTTCATCCGTTCTTTCAAA+TGG | 0.431405 | 3_3:+90812580 | None:intergenic |
| ATCCTGCCAACTTCGCCTTA+AGG | 0.436419 | 3_3:-90813598 | Msa0483080:CDS |
| TGAAATTTGGGTCTATTGGT+GGG | 0.438967 | 3_3:+90812441 | None:intergenic |
| CTCTTCCCTTAAGGCGAAGT+TGG | 0.444275 | 3_3:+90813592 | None:intergenic |
| GGCAAGTCATCCTAAGACTA+AGG | 0.457751 | 3_3:-90818883 | Msa0483080:CDS |
| AATGGTACTGGAAGATTGTC+TGG | 0.471550 | 3_3:+90812598 | None:intergenic |
| TTTGAATTTGTACAGCTTGG+AGG | 0.486572 | 3_3:-90812679 | Msa0483080:intron |
| ATTGAATAGTGTAGGACAAT+GGG | 0.487933 | 3_3:+90812481 | None:intergenic |
| AGGCTGTCTCTTCTTCCCAA+TGG | 0.513651 | 3_3:+90812640 | None:intergenic |
| CATTAACCTCTTGAATCACC+AGG | 0.518011 | 3_3:-90818931 | Msa0483080:CDS |
| TCCAGTACCATTTGAAAGAA+CGG | 0.520517 | 3_3:-90812587 | Msa0483080:CDS |
| GGTGGCATCTATGGTGGAAG+AGG | 0.527491 | 3_3:-90818712 | Msa0483080:intron |
| CTTTCTGGTTAGAAGCAAAG+AGG | 0.545522 | 3_3:+90818850 | None:intergenic |
| GTTTACATCGGATCAAGACT+TGG | 0.546163 | 3_3:-90818904 | Msa0483080:CDS |
| CAACTTCGCCTTAAGGGAAG+AGG | 0.550698 | 3_3:-90813591 | Msa0483080:CDS |
| GAATTGAAACAGGGATGTGA+TGG | 0.557716 | 3_3:-90813665 | Msa0483080:intron |
| TAATTCGTAGACAGTGTCCA+CGG | 0.571658 | 3_3:-90813538 | Msa0483080:CDS |
| GATTGAATAGTGTAGGACAA+TGG | 0.573662 | 3_3:+90812480 | None:intergenic |
| AGAAAGAGCAACTAAATATG+TGG | 0.578071 | 3_3:+90812525 | None:intergenic |
| ATCTAAGGTGGCATCTATGG+TGG | 0.582875 | 3_3:-90818718 | Msa0483080:CDS |
| AATTCGTAGACAGTGTCCAC+GGG | 0.597781 | 3_3:-90813537 | Msa0483080:intron |
| ATGGTTCGATTGAATAGTGT+AGG | 0.630958 | 3_3:+90812473 | None:intergenic |
| AAATAATAGGAAATCTAAGG+TGG | 0.648910 | 3_3:-90818730 | Msa0483080:CDS |
| ACACACCCTGGTGATTCAAG+AGG | 0.659078 | 3_3:+90818925 | None:intergenic |
| TCACCAGGGTGTGTTTACAT+CGG | 0.667869 | 3_3:-90818916 | Msa0483080:CDS |
| GATCCGATGTAAACACACCC+TGG | 0.671264 | 3_3:+90818913 | None:intergenic |
| ACTGTCTACGAATTAGAGCA+CGG | 0.687392 | 3_3:+90813546 | None:intergenic |
| ATTAACCTCTTGAATCACCA+GGG | 0.706268 | 3_3:-90818930 | Msa0483080:CDS |
| CCAATGGTACATCAAAATCG+GGG | 0.716165 | 3_3:+90812656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTATTATTAATTTTTT+AGG | + | chr3_3:90812830-90812849 | None:intergenic | 0.0% |
| !!! | TATTATTAATTTTTTAGGTA+AGG | + | chr3_3:90812825-90812844 | None:intergenic | 10.0% |
| !!! | CTTTTATTAATTTTAAAACA+TGG | + | chr3_3:90813887-90813906 | None:intergenic | 10.0% |
| !!! | TATGTTGATAATATATTTTT+TGG | - | chr3_3:90814050-90814069 | Msa0483080:intron | 10.0% |
| !!! | AATTTGGTTTTTTATTTTTA+CGG | - | chr3_3:90816097-90816116 | Msa0483080:intron | 10.0% |
| !! | TTAAAAAAATAAAACTATTC+GGG | + | chr3_3:90816151-90816170 | None:intergenic | 10.0% |
| !!! | GAATAGTTTTATTTTTTTAA+AGG | - | chr3_3:90816151-90816170 | Msa0483080:intron | 10.0% |
| !!! | ATTTTAGGATTAAATTATTT+TGG | - | chr3_3:90816718-90816737 | Msa0483080:intron | 10.0% |
| !!! | ATTATCTTTATCTTTTAAAT+AGG | + | chr3_3:90818287-90818306 | None:intergenic | 10.0% |
| !! | TAAATCAAGAAGATATATTA+AGG | + | chr3_3:90813078-90813097 | None:intergenic | 15.0% |
| !! | ATTCCCTATTAAAAAAATTA+GGG | + | chr3_3:90813158-90813177 | None:intergenic | 15.0% |
| !! | AAATTAATAAAAGCTCTATA+TGG | - | chr3_3:90813894-90813913 | Msa0483080:intron | 15.0% |
| !! | TATCAATATATCAAATTCAT+TGG | + | chr3_3:90814021-90814040 | None:intergenic | 15.0% |
| !!! | TTTAGTCAAATTTTTGTTTA+TGG | - | chr3_3:90814876-90814895 | Msa0483080:intron | 15.0% |
| !!! | TTTTGTTTATGGTTTTATTT+CGG | - | chr3_3:90814887-90814906 | Msa0483080:intron | 15.0% |
| !! | ACAATAAAAAAAAACCAATA+AGG | + | chr3_3:90815369-90815388 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTGTTTTCGATT+CGG | - | chr3_3:90815377-90815396 | Msa0483080:intron | 15.0% |
| !!! | ATTTTTAAATATGTTTCACA+AGG | - | chr3_3:90815647-90815666 | Msa0483080:intron | 15.0% |
| !! | TAGCAAAATAAATTATCTAA+AGG | - | chr3_3:90816288-90816307 | Msa0483080:intron | 15.0% |
| !! | TTACCAAATAAAAAAATCAT+TGG | - | chr3_3:90816348-90816367 | Msa0483080:intron | 15.0% |
| !!! | AATCCAATGATTTTTTTATT+TGG | + | chr3_3:90816354-90816373 | None:intergenic | 15.0% |
| !!! | ATGATAGTTTTATTAATGAA+AGG | - | chr3_3:90816418-90816437 | Msa0483080:intron | 15.0% |
| !!! | TGATAGTTTTATTAATGAAA+GGG | - | chr3_3:90816419-90816438 | Msa0483080:intron | 15.0% |
| !!! | TATTTTATAAAGATGGTAAA+GGG | + | chr3_3:90817592-90817611 | None:intergenic | 15.0% |
| !!! | AACTAACTATTTTATAAAGA+TGG | + | chr3_3:90817599-90817618 | None:intergenic | 15.0% |
| !! | CGTAAATTATATGTAAATAA+AGG | + | chr3_3:90817690-90817709 | None:intergenic | 15.0% |
| !!! | ATTTGTTAAAAAACTCTTTC+TGG | + | chr3_3:90812560-90812579 | None:intergenic | 20.0% |
| !!! | TGTTATGTTATGTTATTTCA+CGG | - | chr3_3:90812743-90812762 | Msa0483080:intron | 20.0% |
| !! | TCAAAAAAGAGGTTATTAAA+AGG | + | chr3_3:90813031-90813050 | None:intergenic | 20.0% |
| !!! | TTTAATAACCTCTTTTTTGA+AGG | - | chr3_3:90813031-90813050 | Msa0483080:intron | 20.0% |
| !!! | AACACCCTAATTTTTTTAAT+AGG | - | chr3_3:90813151-90813170 | Msa0483080:intron | 20.0% |
| !!! | ACACCCTAATTTTTTTAATA+GGG | - | chr3_3:90813152-90813171 | Msa0483080:intron | 20.0% |
| !! | CATTCCCTATTAAAAAAATT+AGG | + | chr3_3:90813159-90813178 | None:intergenic | 20.0% |
| !!! | AGATTATGATAATCCTTTTT+TGG | + | chr3_3:90813278-90813297 | None:intergenic | 20.0% |
| !! | CTAAGTTTGAAAATAAAGTT+TGG | - | chr3_3:90813547-90813566 | Msa0483080:CDS | 20.0% |
| !!! | TATCAAATTCATTTTGCATA+AGG | + | chr3_3:90814112-90814131 | None:intergenic | 20.0% |
| !! | ACCGTTAGATTAAAAAATTA+TGG | - | chr3_3:90814464-90814483 | Msa0483080:intron | 20.0% |
| !!! | CCCATAATTTTTTAATCTAA+CGG | + | chr3_3:90814468-90814487 | None:intergenic | 20.0% |
| !! | CCGTTAGATTAAAAAATTAT+GGG | - | chr3_3:90814465-90814484 | Msa0483080:intron | 20.0% |
| !! | TATGGGAATCATAAATTAAA+TGG | - | chr3_3:90814482-90814501 | Msa0483080:intron | 20.0% |
| !! | TAAACGTAAACAAAAAAGAA+GGG | - | chr3_3:90814541-90814560 | Msa0483080:intron | 20.0% |
| !!! | TTTATCATTGATTAAGTTTG+GGG | + | chr3_3:90815234-90815253 | None:intergenic | 20.0% |
| !!! | GTTTATCATTGATTAAGTTT+GGG | + | chr3_3:90815235-90815254 | None:intergenic | 20.0% |
| !!! | AGTTTATCATTGATTAAGTT+TGG | + | chr3_3:90815236-90815255 | None:intergenic | 20.0% |
| !!! | AAGATAATCAGTATTGATAA+GGG | + | chr3_3:90815478-90815497 | None:intergenic | 20.0% |
| !!! | TAAGATAATCAGTATTGATA+AGG | + | chr3_3:90815479-90815498 | None:intergenic | 20.0% |
| !! | AATAAACAAAAATGAGGAAA+GGG | + | chr3_3:90815941-90815960 | None:intergenic | 20.0% |
| !! | AAATAAACAAAAATGAGGAA+AGG | + | chr3_3:90815942-90815961 | None:intergenic | 20.0% |
| !!! | TTCCTCATTTTTGTTTATTT+TGG | - | chr3_3:90815942-90815961 | Msa0483080:intron | 20.0% |
| !! | CCAAATTTATGTATGAAAAA+TGG | + | chr3_3:90816084-90816103 | None:intergenic | 20.0% |
| !!! | CCATTTTTCATACATAAATT+TGG | - | chr3_3:90816081-90816100 | Msa0483080:intron | 20.0% |
| !!! | TTTTATTTTTACGGTAAGTA+TGG | - | chr3_3:90816106-90816125 | Msa0483080:intron | 20.0% |
| !!! | ACACATTTTATTTTGAAAGA+CGG | - | chr3_3:90816182-90816201 | Msa0483080:intron | 20.0% |
| !! | TAATATTTAGTTAACCACAA+CGG | + | chr3_3:90816241-90816260 | None:intergenic | 20.0% |
| !! | ATATGATAGAAATGAAAAGA+GGG | - | chr3_3:90816666-90816685 | Msa0483080:intron | 20.0% |
| !!! | GAATGAATGTATGAAATTTT+AGG | - | chr3_3:90816703-90816722 | Msa0483080:intron | 20.0% |
| !!! | TATTTTGGTTACACAATTTT+TGG | - | chr3_3:90816733-90816752 | Msa0483080:intron | 20.0% |
| !!! | CTCAATGATATTTTAAGAAA+AGG | - | chr3_3:90816837-90816856 | Msa0483080:intron | 20.0% |
| !! | TTGCGTTAATTATATTATTC+TGG | + | chr3_3:90816881-90816900 | None:intergenic | 20.0% |
| !! | TATTTATAGATGGATATTGA+GGG | + | chr3_3:90817018-90817037 | None:intergenic | 20.0% |
| !! | ATATTTATAGATGGATATTG+AGG | + | chr3_3:90817019-90817038 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr3_3:90817423-90817442 | Msa0483080:intron | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr3_3:90817424-90817443 | Msa0483080:intron | 20.0% |
| !!! | TAACATTTTTTCTATATCTC+AGG | + | chr3_3:90817509-90817528 | None:intergenic | 20.0% |
| !!! | TTTCAAAAATTAGTCTACAA+TGG | - | chr3_3:90817565-90817584 | Msa0483080:intron | 20.0% |
| !!! | CTATTTTATAAAGATGGTAA+AGG | + | chr3_3:90817593-90817612 | None:intergenic | 20.0% |
| !! | TTTCCTTATGATAAAATAAG+AGG | - | chr3_3:90818248-90818267 | Msa0483080:intron | 20.0% |
| !!! | TTACCTCTTATTTTATCATA+AGG | + | chr3_3:90818254-90818273 | None:intergenic | 20.0% |
| !!! | ACATGAGATTAAATTTTTAC+TGG | - | chr3_3:90818537-90818556 | Msa0483080:intron | 20.0% |
| !!! | ATTTGCTAATGCTTTTGTTA+AGG | - | chr3_3:90812578-90812597 | Msa0483080:CDS | 25.0% |
| !!! | TTTTGTTAAGGTTAGTCAAT+TGG | - | chr3_3:90812590-90812609 | Msa0483080:CDS | 25.0% |
| ! | TCCAAATAATAGGAAATCTA+AGG | - | chr3_3:90812659-90812678 | Msa0483080:CDS | 25.0% |
| ! | ACCTTAGATTTCCTATTATT+TGG | + | chr3_3:90812663-90812682 | None:intergenic | 25.0% |
| ! | AAATAATAGGAAATCTAAGG+TGG | - | chr3_3:90812662-90812681 | Msa0483080:CDS | 25.0% |
| !!! | GTTATGTTATGTTATTTCAC+GGG | - | chr3_3:90812744-90812763 | Msa0483080:intron | 25.0% |
| !!! | TTATGTTATGTTATTTCACG+GGG | - | chr3_3:90812745-90812764 | Msa0483080:intron | 25.0% |
| !!! | ATTAATTTTTTAGGTAAGGC+AGG | + | chr3_3:90812821-90812840 | None:intergenic | 25.0% |
| ! | TGTATGAAATGTGTAATAAG+TGG | - | chr3_3:90812940-90812959 | Msa0483080:intron | 25.0% |
| !!! | AAATATGTTCGTTTTTACAG+TGG | - | chr3_3:90813120-90813139 | Msa0483080:intron | 25.0% |
| !! | TCGAAAACATTTTCCAAAAA+AGG | - | chr3_3:90813262-90813281 | Msa0483080:intron | 25.0% |
| ! | TTAAACCATCATCAATAAGA+TGG | - | chr3_3:90813593-90813612 | Msa0483080:CDS | 25.0% |
| ! | TAAACCATCATCAATAAGAT+GGG | - | chr3_3:90813594-90813613 | Msa0483080:CDS | 25.0% |
| !! | AATCTATCATATAGAGCTTT+TGG | + | chr3_3:90813933-90813952 | None:intergenic | 25.0% |
| !! | AGCTCTTTTCTTATTGAAAA+TGG | - | chr3_3:90813954-90813973 | Msa0483080:intron | 25.0% |
| ! | AACAAATAAAAAGATGTGCA+AGG | - | chr3_3:90814076-90814095 | Msa0483080:intron | 25.0% |
| !!! | GAGAACTTAGATATTTTTTC+TGG | - | chr3_3:90814144-90814163 | Msa0483080:intron | 25.0% |
| !!! | CTTAGATATTTTTTCTGGAT+TGG | - | chr3_3:90814149-90814168 | Msa0483080:intron | 25.0% |
| !! | ATTTATCTATACGGGTTTTT+CGG | + | chr3_3:90814314-90814333 | None:intergenic | 25.0% |
| ! | GTTTGCATATTTATCTATAC+GGG | + | chr3_3:90814322-90814341 | None:intergenic | 25.0% |
| ! | CGTTTGCATATTTATCTATA+CGG | + | chr3_3:90814323-90814342 | None:intergenic | 25.0% |
| ! | CGTATAGATAAATATGCAAA+CGG | - | chr3_3:90814321-90814340 | Msa0483080:intron | 25.0% |
| ! | GTATAGATAAATATGCAAAC+GGG | - | chr3_3:90814322-90814341 | Msa0483080:intron | 25.0% |
| ! | GGAATCATAAATTAAATGGA+TGG | - | chr3_3:90814486-90814505 | Msa0483080:intron | 25.0% |
| ! | GTAAACGTAAACAAAAAAGA+AGG | - | chr3_3:90814540-90814559 | Msa0483080:intron | 25.0% |
| !! | CTAAAGTTGTATTGAGTTTT+GGG | + | chr3_3:90814787-90814806 | None:intergenic | 25.0% |
| !!! | TCTAAAGTTGTATTGAGTTT+TGG | + | chr3_3:90814788-90814807 | None:intergenic | 25.0% |
| !! | GGTTGAAATAAAATCCTTTT+CGG | - | chr3_3:90815001-90815020 | Msa0483080:intron | 25.0% |
| !! | AACTTGTAAAAAGCATAACA+TGG | - | chr3_3:90815252-90815271 | Msa0483080:intron | 25.0% |
| ! | TTAATAAAAAGAGAACTGCT+TGG | - | chr3_3:90815447-90815466 | Msa0483080:intron | 25.0% |
| !!! | AGATAATCAGTATTGATAAG+GGG | + | chr3_3:90815477-90815496 | None:intergenic | 25.0% |
| ! | CAATAAAATAGTAAGTGTTC+AGG | - | chr3_3:90815582-90815601 | Msa0483080:intron | 25.0% |
| ! | TAAAACATTAACACTGTGTT+TGG | - | chr3_3:90815714-90815733 | Msa0483080:intron | 25.0% |
| ! | TGTTTGGTTGAAAAGAAATA+AGG | - | chr3_3:90815730-90815749 | Msa0483080:intron | 25.0% |
| !!! | TTTTCTCTCTTCTTATTTCT+TGG | + | chr3_3:90815815-90815834 | None:intergenic | 25.0% |
| ! | AAGAGAGAAAAACATTATTG+TGG | - | chr3_3:90815824-90815843 | Msa0483080:intron | 25.0% |
| ! | AGAGAGAAAAACATTATTGT+GGG | - | chr3_3:90815825-90815844 | Msa0483080:intron | 25.0% |
| ! | CAATGGAAAGTGAAAATAAA+AGG | + | chr3_3:90815905-90815924 | None:intergenic | 25.0% |
| ! | TGCCAAAATAAACAAAAATG+AGG | + | chr3_3:90815947-90815966 | None:intergenic | 25.0% |
| ! | GATATGATAGAAATGAAAAG+AGG | - | chr3_3:90816665-90816684 | Msa0483080:intron | 25.0% |
| ! | ACTTGCATGATATTTATAGA+TGG | + | chr3_3:90817028-90817047 | None:intergenic | 25.0% |
| ! | ACCAATTAGTAAACCAAAAA+TGG | - | chr3_3:90817062-90817081 | Msa0483080:intron | 25.0% |
| !!! | ACCATTTTTGGTTTACTAAT+TGG | + | chr3_3:90817066-90817085 | None:intergenic | 25.0% |
| ! | TTAGTAAACCAAAAATGGTA+AGG | - | chr3_3:90817067-90817086 | Msa0483080:intron | 25.0% |
| ! | TAGTAAACCAAAAATGGTAA+GGG | - | chr3_3:90817068-90817087 | Msa0483080:intron | 25.0% |
| !!! | TCCTTGATTTTTTTTTACCT+GGG | + | chr3_3:90817329-90817348 | None:intergenic | 25.0% |
| !!! | TTCCTTGATTTTTTTTTACC+TGG | + | chr3_3:90817330-90817349 | None:intergenic | 25.0% |
| !!! | ATGTTGATTTGAATTGAAAC+AGG | - | chr3_3:90817717-90817736 | Msa0483080:intron | 25.0% |
| !!! | TGTTGATTTGAATTGAAACA+GGG | - | chr3_3:90817718-90817737 | Msa0483080:intron | 25.0% |
| ! | AATGACTAACTTCAAGTATT+TGG | + | chr3_3:90818074-90818093 | None:intergenic | 25.0% |
| !!! | TTCAATGTGTTATTTGATCA+CGG | - | chr3_3:90818594-90818613 | Msa0483080:intron | 25.0% |
| ! | AGAAAATGTGAAATAATGCT+AGG | + | chr3_3:90818672-90818691 | None:intergenic | 25.0% |
| ! | TTATTTGAATTTGTACAGCT+TGG | - | chr3_3:90818710-90818729 | Msa0483080:intron | 25.0% |
| ! | CATGTTTTGCTCCAAATAAT+AGG | - | chr3_3:90812649-90812668 | Msa0483080:CDS | 30.0% |
| !! | TTCTTCACCAAACTTGTTTT+TGG | + | chr3_3:90813622-90813641 | None:intergenic | 30.0% |
| ! | TGAATTTGATAAGAGCATGA+TGG | - | chr3_3:90814121-90814140 | Msa0483080:intron | 30.0% |
| ! | GAATTTGATAAGAGCATGAT+GGG | - | chr3_3:90814122-90814141 | Msa0483080:intron | 30.0% |
| GAAATCAAGCAACTTTCTAA+TGG | - | chr3_3:90814171-90814190 | Msa0483080:intron | 30.0% | |
| !! | TCTAATGGTATTTTGAGTGT+AGG | - | chr3_3:90814186-90814205 | Msa0483080:intron | 30.0% |
| ! | TTTATCTATACGGGTTTTTC+GGG | + | chr3_3:90814313-90814332 | None:intergenic | 30.0% |
| TGAGAGAATAACAGTAGAAA+GGG | + | chr3_3:90814568-90814587 | None:intergenic | 30.0% | |
| GAGATGAAAATATGAGAAAG+AGG | + | chr3_3:90814682-90814701 | None:intergenic | 30.0% | |
| AAGAGATTGAGAGATACAAT+TGG | + | chr3_3:90814723-90814742 | None:intergenic | 30.0% | |
| AATTGTATCTCTCAATCTCT+TGG | - | chr3_3:90814722-90814741 | Msa0483080:intron | 30.0% | |
| !!! | GGCATATTTTAAAGCAAAAG+GGG | + | chr3_3:90814766-90814785 | None:intergenic | 30.0% |
| !!! | GGGCATATTTTAAAGCAAAA+GGG | + | chr3_3:90814767-90814786 | None:intergenic | 30.0% |
| !!! | TGGGCATATTTTAAAGCAAA+AGG | + | chr3_3:90814768-90814787 | None:intergenic | 30.0% |
| CTATTGTCTATCTTGCAATT+AGG | + | chr3_3:90815085-90815104 | None:intergenic | 30.0% | |
| TGAGAATACAATGGAAATCT+AGG | + | chr3_3:90815114-90815133 | None:intergenic | 30.0% | |
| AGAGAAATAGAGTAGATTTG+AGG | + | chr3_3:90816521-90816540 | None:intergenic | 30.0% | |
| GAAATTGAGAAGAGAGAAAT+AGG | + | chr3_3:90816574-90816593 | None:intergenic | 30.0% | |
| ! | TTTCCTCTAAGAGATTATCA+AGG | - | chr3_3:90817160-90817179 | Msa0483080:intron | 30.0% |
| GACTAGATTGGAATTACTAT+TGG | - | chr3_3:90817199-90817218 | Msa0483080:intron | 30.0% | |
| TTTCAAACACATCTTCAAGA+TGG | + | chr3_3:90817252-90817271 | None:intergenic | 30.0% | |
| GATGTGTTTGAAAAAGATAG+TGG | - | chr3_3:90817259-90817278 | Msa0483080:intron | 30.0% | |
| TCCCAGGTAAAAAAAAATCA+AGG | - | chr3_3:90817325-90817344 | Msa0483080:intron | 30.0% | |
| AGTTAGTGAAGTAGTTAAGT+TGG | - | chr3_3:90817403-90817422 | Msa0483080:intron | 30.0% | |
| CTATCCTTAACACAATTATG+AGG | - | chr3_3:90817649-90817668 | Msa0483080:intron | 30.0% | |
| TGAACCTCATAATTGTGTTA+AGG | + | chr3_3:90817656-90817675 | None:intergenic | 30.0% | |
| ! | TTTTCGTTTGCCTCATTTTA+AGG | - | chr3_3:90817986-90818005 | Msa0483080:intron | 30.0% |
| ! | TCTAAGATAAGGATGATCTT+AGG | + | chr3_3:90818202-90818221 | None:intergenic | 30.0% |
| TCTTTATCAGAATTCGAACT+CGG | + | chr3_3:90818400-90818419 | None:intergenic | 30.0% | |
| ! | ATATGTGGCATCAAATTTTC+TGG | + | chr3_3:90818855-90818874 | None:intergenic | 30.0% |
| AGAAAGAGCAACTAAATATG+TGG | + | chr3_3:90818870-90818889 | None:intergenic | 30.0% | |
| ACATATTTAGTTGCTCTTTC+TGG | - | chr3_3:90818869-90818888 | Msa0483080:CDS | 30.0% | |
| CATATTTAGTTGCTCTTTCT+GGG | - | chr3_3:90818870-90818889 | Msa0483080:CDS | 30.0% | |
| ATTGAATAGTGTAGGACAAT+GGG | + | chr3_3:90818914-90818933 | None:intergenic | 30.0% | |
| ATTAACCTCTTGAATCACCA+GGG | - | chr3_3:90812462-90812481 | Msa0483080:CDS | 35.0% | |
| ! | TTCACAATCTCCTTAGTCTT+AGG | + | chr3_3:90812522-90812541 | None:intergenic | 35.0% |
| !!! | AGTCAATTGGATGTTTTGAC+TGG | - | chr3_3:90812603-90812622 | Msa0483080:CDS | 35.0% |
| !!! | GATGTTTTGACTGGAAATCA+AGG | - | chr3_3:90812612-90812631 | Msa0483080:CDS | 35.0% |
| ! | GTAGTTTTTCTCAATGGGAT+TGG | + | chr3_3:90812854-90812873 | None:intergenic | 35.0% |
| ATCCCATTGAGAAAAACTAC+TGG | - | chr3_3:90812854-90812873 | Msa0483080:intron | 35.0% | |
| ! | AGCCAGTAGTTTTTCTCAAT+GGG | + | chr3_3:90812859-90812878 | None:intergenic | 35.0% |
| ! | AAGCCAGTAGTTTTTCTCAA+TGG | + | chr3_3:90812860-90812879 | None:intergenic | 35.0% |
| !! | GAAAAACTACTGGCTTAAGT+AGG | - | chr3_3:90812864-90812883 | Msa0483080:intron | 35.0% |
| ! | ACTGGCTTAAGTAGGTAATA+AGG | - | chr3_3:90812872-90812891 | Msa0483080:intron | 35.0% |
| CTGGCTTAAGTAGGTAATAA+GGG | - | chr3_3:90812873-90812892 | Msa0483080:intron | 35.0% | |
| ATAAGTGGCTAATGAGAGTA+TGG | - | chr3_3:90812955-90812974 | Msa0483080:intron | 35.0% | |
| ACTCAAGACCTTCAAAAAAG+AGG | + | chr3_3:90813042-90813061 | None:intergenic | 35.0% | |
| ATCGTGAATTCGTTTGTGTA+AGG | + | chr3_3:90813207-90813226 | None:intergenic | 35.0% | |
| CATCCACATGAGAAAATCAT+AGG | - | chr3_3:90813384-90813403 | Msa0483080:intron | 35.0% | |
| ! | CTTCCTATGATTTTCTCATG+TGG | + | chr3_3:90813390-90813409 | None:intergenic | 35.0% |
| ATATGAGTCAAACATGTCCA+TGG | - | chr3_3:90813446-90813465 | Msa0483080:intron | 35.0% | |
| TCATTCTGAACCAAAATCCA+TGG | - | chr3_3:90813473-90813492 | Msa0483080:intron | 35.0% | |
| ! | ATGACTTCATCCATGGATTT+TGG | + | chr3_3:90813486-90813505 | None:intergenic | 35.0% |
| ATCAATGATGACTTCATCCA+TGG | + | chr3_3:90813493-90813512 | None:intergenic | 35.0% | |
| AACTACGAGGATTAGAAACA+AGG | + | chr3_3:90813575-90813594 | None:intergenic | 35.0% | |
| !! | TTGATGATGGTTTAACTACG+AGG | + | chr3_3:90813588-90813607 | None:intergenic | 35.0% |
| ATCAGAAACAATGCTAGACT+TGG | - | chr3_3:90813651-90813670 | Msa0483080:CDS | 35.0% | |
| CAAGGCTACAATCAATATGA+TGG | - | chr3_3:90813676-90813695 | Msa0483080:intron | 35.0% | |
| ! | ACACTTTTACACAAGTAGCA+AGG | - | chr3_3:90813713-90813732 | Msa0483080:intron | 35.0% |
| AGATAAATATGCAAACGGGT+AGG | - | chr3_3:90814326-90814345 | Msa0483080:intron | 35.0% | |
| CAGTTCTGTGTGGTTTAAAA+TGG | - | chr3_3:90814385-90814404 | Msa0483080:intron | 35.0% | |
| ! | TCTGTGTGGTTTAAAATGGT+CGG | - | chr3_3:90814389-90814408 | Msa0483080:intron | 35.0% |
| TTAATCTAACGGTGCTTGTT+CGG | + | chr3_3:90814457-90814476 | None:intergenic | 35.0% | |
| GTGAGAGAATAACAGTAGAA+AGG | + | chr3_3:90814569-90814588 | None:intergenic | 35.0% | |
| GAAAATATGAGAAAGAGGAG+CGG | + | chr3_3:90814677-90814696 | None:intergenic | 35.0% | |
| !! | ATCTAGCCAAGTATTGATGA+AGG | - | chr3_3:90814807-90814826 | Msa0483080:intron | 35.0% |
| !! | TCTAGCCAAGTATTGATGAA+GGG | - | chr3_3:90814808-90814827 | Msa0483080:intron | 35.0% |
| AACATCCCTTCATCAATACT+TGG | + | chr3_3:90814816-90814835 | None:intergenic | 35.0% | |
| CAAAAACAAGTTAGCAGCTT+TGG | + | chr3_3:90814856-90814875 | None:intergenic | 35.0% | |
| !!! | TGGTTTTATTTCGGCATTCA+CGG | - | chr3_3:90814896-90814915 | Msa0483080:intron | 35.0% |
| CCTTGCAGATTTGATATCTT+CGG | - | chr3_3:90815026-90815045 | Msa0483080:intron | 35.0% | |
| TCCATTGTATTCTCATGATG+CGG | - | chr3_3:90815119-90815138 | Msa0483080:intron | 35.0% | |
| AGAAAATGGAGCAAAAACCA+AGG | + | chr3_3:90815184-90815203 | None:intergenic | 35.0% | |
| !! | TATAGTCATAACGGACATTC+TGG | + | chr3_3:90815211-90815230 | None:intergenic | 35.0% |
| ! | AGTTTGGGGTATAGTCATAA+CGG | + | chr3_3:90815220-90815239 | None:intergenic | 35.0% |
| AACCAGTAATGCAAACAAGT+GGG | + | chr3_3:90815419-90815438 | None:intergenic | 35.0% | |
| TAACCAGTAATGCAAACAAG+TGG | + | chr3_3:90815420-90815439 | None:intergenic | 35.0% | |
| ! | CTTGTTTGCATTACTGGTTA+AGG | - | chr3_3:90815420-90815439 | Msa0483080:intron | 35.0% |
| GATATCAAACTTCTCCTGTT+TGG | - | chr3_3:90815785-90815804 | Msa0483080:intron | 35.0% | |
| CGAAGAAAGATAAAAGTGGT+GGG | + | chr3_3:90815852-90815871 | None:intergenic | 35.0% | |
| TCAGCGAAGAAAGATAAAAG+TGG | + | chr3_3:90815856-90815875 | None:intergenic | 35.0% | |
| AAATAAAAGGACCTTTCTCC+TGG | + | chr3_3:90815892-90815911 | None:intergenic | 35.0% | |
| ATTGTATACATCTTCCGTTG+TGG | - | chr3_3:90816224-90816243 | Msa0483080:intron | 35.0% | |
| !! | AGTAGATTTGAGGTGTTGTT+TGG | + | chr3_3:90816511-90816530 | None:intergenic | 35.0% |
| GAAATAGGTGAGAGAGAATA+TGG | + | chr3_3:90816559-90816578 | None:intergenic | 35.0% | |
| TTCTATTTCCTTCTCTCTCA+GGG | + | chr3_3:90816615-90816634 | None:intergenic | 35.0% | |
| TTTCTATTTCCTTCTCTCTC+AGG | + | chr3_3:90816616-90816635 | None:intergenic | 35.0% | |
| ATGTGTATACATGCACGTTA+TGG | - | chr3_3:90816791-90816810 | Msa0483080:intron | 35.0% | |
| ATCTTATCTTGTCTCCTAGT+TGG | - | chr3_3:90816940-90816959 | Msa0483080:intron | 35.0% | |
| ! | CTACTAACCCTTACCATTTT+TGG | + | chr3_3:90817078-90817097 | None:intergenic | 35.0% |
| !! | GATGGATCGATTTTGTTGAA+CGG | - | chr3_3:90817745-90817764 | Msa0483080:intron | 35.0% |
| AAAATAGATGTAGAACCCGA+AGG | + | chr3_3:90818037-90818056 | None:intergenic | 35.0% | |
| TGATCTTAGGACTAAAAGAG+CGG | + | chr3_3:90818189-90818208 | None:intergenic | 35.0% | |
| ! | TGATGCACAAGTCTAAGATA+AGG | + | chr3_3:90818213-90818232 | None:intergenic | 35.0% |
| TAAAACATCTTTCGTAGCAC+TGG | - | chr3_3:90818322-90818341 | Msa0483080:intron | 35.0% | |
| GCTCAAGTAGTTTATGTTGA+AGG | - | chr3_3:90818354-90818373 | Msa0483080:intron | 35.0% | |
| GTAGTTTATGTTGAAGGAGT+TGG | - | chr3_3:90818360-90818379 | Msa0483080:intron | 35.0% | |
| ATAGAGTAGTTGCTATAGCT+AGG | + | chr3_3:90818482-90818501 | None:intergenic | 35.0% | |
| ATAATGCTAGGAATACGTAG+AGG | + | chr3_3:90818660-90818679 | None:intergenic | 35.0% | |
| TTTGAATTTGTACAGCTTGG+AGG | - | chr3_3:90818713-90818732 | Msa0483080:CDS | 35.0% | |
| TCCCAATGGTACATCAAAAT+CGG | + | chr3_3:90818741-90818760 | None:intergenic | 35.0% | |
| TCCAGTACCATTTGAAAGAA+CGG | - | chr3_3:90818805-90818824 | Msa0483080:CDS | 35.0% | |
| TGTTCATCCGTTCTTTCAAA+TGG | + | chr3_3:90818815-90818834 | None:intergenic | 35.0% | |
| GATTGAATAGTGTAGGACAA+TGG | + | chr3_3:90818915-90818934 | None:intergenic | 35.0% | |
| ATGGTTCGATTGAATAGTGT+AGG | + | chr3_3:90818922-90818941 | None:intergenic | 35.0% | |
| !! | TATTGGTGGGTTTGTATCAA+TGG | + | chr3_3:90818941-90818960 | None:intergenic | 35.0% |
| CATTAACCTCTTGAATCACC+AGG | - | chr3_3:90812461-90812480 | Msa0483080:CDS | 40.0% | |
| GTTTACATCGGATCAAGACT+TGG | - | chr3_3:90812488-90812507 | Msa0483080:CDS | 40.0% | |
| !! | CTTTCTGGTTAGAAGCAAAG+AGG | + | chr3_3:90812545-90812564 | None:intergenic | 40.0% |
| ! | GAAATCTAAGGTGGCATCTA+TGG | - | chr3_3:90812671-90812690 | Msa0483080:intron | 40.0% |
| ATAGACTTGTGTGCACAATG+TGG | + | chr3_3:90812985-90813004 | None:intergenic | 40.0% | |
| TCTACCAATCTCCAACTCTT+TGG | + | chr3_3:90813360-90813379 | None:intergenic | 40.0% | |
| TGGTTCAGAATGAGATACCA+TGG | + | chr3_3:90813466-90813485 | None:intergenic | 40.0% | |
| ATGGGTGCCAAAAACAAGTT+TGG | - | chr3_3:90813612-90813631 | Msa0483080:CDS | 40.0% | |
| GTTTATGTTCATCAACCACC+TGG | - | chr3_3:90813841-90813860 | Msa0483080:intron | 40.0% | |
| TTTCTCTTGATGAATCCAGG+TGG | + | chr3_3:90813859-90813878 | None:intergenic | 40.0% | |
| TCGTTTCTCTTGATGAATCC+AGG | + | chr3_3:90813862-90813881 | None:intergenic | 40.0% | |
| !!! | TCATATAGAGCTTTTGGAGC+TGG | + | chr3_3:90813927-90813946 | None:intergenic | 40.0% |
| AAATGGTCGGTATCAGTTGT+TGG | - | chr3_3:90814402-90814421 | Msa0483080:intron | 40.0% | |
| ! | TTAGATGCACTCTCTGGAAA+AGG | - | chr3_3:90814510-90814529 | Msa0483080:intron | 40.0% |
| ! | TAGATGCACTCTCTGGAAAA+GGG | - | chr3_3:90814511-90814530 | Msa0483080:intron | 40.0% |
| AAAAGGGGAGATGATTGATG+CGG | + | chr3_3:90814751-90814770 | None:intergenic | 40.0% | |
| AAATCTGCAAGGAACCGAAA+AGG | + | chr3_3:90815018-90815037 | None:intergenic | 40.0% | |
| CCGAAGATATCAAATCTGCA+AGG | + | chr3_3:90815029-90815048 | None:intergenic | 40.0% | |
| AATTAGGACTGAGCATCAGA+CGG | + | chr3_3:90815069-90815088 | None:intergenic | 40.0% | |
| CCATTGTATTCTCATGATGC+GGG | - | chr3_3:90815120-90815139 | Msa0483080:intron | 40.0% | |
| CATTGTATTCTCATGATGCG+GGG | - | chr3_3:90815121-90815140 | Msa0483080:intron | 40.0% | |
| TACTTCCTACTTCGCATCAT+GGG | + | chr3_3:90815154-90815173 | None:intergenic | 40.0% | |
| GACATTCTGGTGAGAGAAAA+TGG | + | chr3_3:90815198-90815217 | None:intergenic | 40.0% | |
| ! | GGTTACTAGTTGTCTAGTTC+AGG | - | chr3_3:90815273-90815292 | Msa0483080:intron | 40.0% |
| ! | TACTAGTTGTCTAGTTCAGG+TGG | - | chr3_3:90815276-90815295 | Msa0483080:intron | 40.0% |
| ! | CCTTTTCTCTTGCATGTTCA+TGG | + | chr3_3:90815306-90815325 | None:intergenic | 40.0% |
| CCATGAACATGCAAGAGAAA+AGG | - | chr3_3:90815303-90815322 | Msa0483080:intron | 40.0% | |
| TGAACATGCAAGAGAAAAGG+AGG | - | chr3_3:90815306-90815325 | Msa0483080:intron | 40.0% | |
| GAACATGCAAGAGAAAAGGA+GGG | - | chr3_3:90815307-90815326 | Msa0483080:intron | 40.0% | |
| GAATGAGTCGATCGTACTTA+AGG | + | chr3_3:90815347-90815366 | None:intergenic | 40.0% | |
| ! | ACGATCGACTCATTCCTTAT+TGG | - | chr3_3:90815352-90815371 | Msa0483080:intron | 40.0% |
| GAAACTGCTGAGAGAGAAAT+TGG | - | chr3_3:90815759-90815778 | Msa0483080:intron | 40.0% | |
| TCAAACTTCTCCTGTTTGGT+AGG | - | chr3_3:90815789-90815808 | Msa0483080:intron | 40.0% | |
| TATTTCTTGGCCTACCAAAC+AGG | + | chr3_3:90815802-90815821 | None:intergenic | 40.0% | |
| GCGAAGAAAGATAAAAGTGG+TGG | + | chr3_3:90815853-90815872 | None:intergenic | 40.0% | |
| AAATGAGGAAAGGGTGACAA+GGG | + | chr3_3:90815932-90815951 | None:intergenic | 40.0% | |
| AAAATGAGGAAAGGGTGACA+AGG | + | chr3_3:90815933-90815952 | None:intergenic | 40.0% | |
| !! | TTCTGGAATGCACAAGTTGA+AGG | + | chr3_3:90816864-90816883 | None:intergenic | 40.0% |
| ! | GAGATTTGGAACAACCAACT+AGG | + | chr3_3:90816957-90816976 | None:intergenic | 40.0% |
| ! | GAGCACATGCATTTGAGATT+TGG | + | chr3_3:90816971-90816990 | None:intergenic | 40.0% |
| AGTGGTCTCTTTGCACAATA+TGG | + | chr3_3:90816993-90817012 | None:intergenic | 40.0% | |
| ! | AGGCCTTGATAATCTCTTAG+AGG | + | chr3_3:90817166-90817185 | None:intergenic | 40.0% |
| CAATCTAGTCCCCTCATAAT+GGG | + | chr3_3:90817189-90817208 | None:intergenic | 40.0% | |
| ! | CTATTGGTTGTCATGTCCTA+AGG | - | chr3_3:90817215-90817234 | Msa0483080:intron | 40.0% |
| GTCATGTCCTAAGGATTGTA+AGG | - | chr3_3:90817224-90817243 | Msa0483080:intron | 40.0% | |
| GATGGAACCTTACAATCCTT+AGG | + | chr3_3:90817234-90817253 | None:intergenic | 40.0% | |
| GAATTGAAACAGGGATGTGA+TGG | - | chr3_3:90817727-90817746 | Msa0483080:intron | 40.0% | |
| ! | TCGATTTTGTTGAACGGTGT+TGG | - | chr3_3:90817751-90817770 | Msa0483080:intron | 40.0% |
| TTGAATAGCCTCTTCCCTTA+AGG | + | chr3_3:90817812-90817831 | None:intergenic | 40.0% | |
| ! | TAGAGCACGGAGATTTTCAA+GGG | + | chr3_3:90817836-90817855 | None:intergenic | 40.0% |
| ! | TTAGAGCACGGAGATTTTCA+AGG | + | chr3_3:90817837-90817856 | None:intergenic | 40.0% |
| ACTGTCTACGAATTAGAGCA+CGG | + | chr3_3:90817849-90817868 | None:intergenic | 40.0% | |
| TAATTCGTAGACAGTGTCCA+CGG | - | chr3_3:90817854-90817873 | Msa0483080:intron | 40.0% | |
| !! | TGCCTCATTTTAAGGACACT+AGG | - | chr3_3:90817994-90818013 | Msa0483080:intron | 40.0% |
| CTCCTAGTGTCCTTAAAATG+AGG | + | chr3_3:90817999-90818018 | None:intergenic | 40.0% | |
| GCATTTGTACACGAAACCTT+CGG | - | chr3_3:90818018-90818037 | Msa0483080:intron | 40.0% | |
| CATTTGTACACGAAACCTTC+GGG | - | chr3_3:90818019-90818038 | Msa0483080:intron | 40.0% | |
| TTGAAGAGACTAGTAGAGCT+CGG | + | chr3_3:90818148-90818167 | None:intergenic | 40.0% | |
| ! | AGCTCTACTAGTCTCTTCAA+AGG | - | chr3_3:90818148-90818167 | Msa0483080:intron | 40.0% |
| !! | ATCTTTCGTAGCACTGGTAT+TGG | - | chr3_3:90818328-90818347 | Msa0483080:intron | 40.0% |
| GAAGGAGTTGGAATAGTCAA+AGG | - | chr3_3:90818372-90818391 | Msa0483080:intron | 40.0% | |
| CCAATGGTACATCAAAATCG+GGG | + | chr3_3:90818739-90818758 | None:intergenic | 40.0% | |
| CCCAATGGTACATCAAAATC+GGG | + | chr3_3:90818740-90818759 | None:intergenic | 40.0% | |
| !! | CCCGATTTTGATGTACCATT+GGG | - | chr3_3:90818737-90818756 | Msa0483080:CDS | 40.0% |
| ! | AATGGTACTGGAAGATTGTC+TGG | + | chr3_3:90818797-90818816 | None:intergenic | 40.0% |
| TCCGTTCTTTCAAATGGTAC+TGG | + | chr3_3:90818809-90818828 | None:intergenic | 40.0% | |
| TCACCAGGGTGTGTTTACAT+CGG | - | chr3_3:90812476-90812495 | Msa0483080:CDS | 45.0% | |
| GGCAAGTCATCCTAAGACTA+AGG | - | chr3_3:90812509-90812528 | Msa0483080:CDS | 45.0% | |
| ! | ATCTAAGGTGGCATCTATGG+TGG | - | chr3_3:90812674-90812693 | Msa0483080:intron | 45.0% |
| GAAACAACGACATCCCAACT+AGG | + | chr3_3:90812777-90812796 | None:intergenic | 45.0% | |
| !! | TTTTAGGTAAGGCAGGAGTG+TGG | + | chr3_3:90812814-90812833 | None:intergenic | 45.0% |
| GTTAGAACCCTCCAAAGAGT+TGG | - | chr3_3:90813346-90813365 | Msa0483080:intron | 45.0% | |
| CCAATCTCCAACTCTTTGGA+GGG | + | chr3_3:90813356-90813375 | None:intergenic | 45.0% | |
| ACCAATCTCCAACTCTTTGG+AGG | + | chr3_3:90813357-90813376 | None:intergenic | 45.0% | |
| GGCACCCATCTTATTGATGA+TGG | + | chr3_3:90813601-90813620 | None:intergenic | 45.0% | |
| ACAATGCTAGACTTGGCACA+AGG | - | chr3_3:90813658-90813677 | Msa0483080:intron | 45.0% | |
| TCATAGCCTGCATTGCAAGT+AGG | - | chr3_3:90814257-90814276 | Msa0483080:intron | 45.0% | |
| !!! | ATACGGGTTTTTCGGGTTGT+AGG | + | chr3_3:90814306-90814325 | None:intergenic | 45.0% |
| TGCAAACGGGTAGGTTCAAT+CGG | - | chr3_3:90814335-90814354 | Msa0483080:intron | 45.0% | |
| GTAGGTTCAATCGGGTTTGT+CGG | - | chr3_3:90814344-90814363 | Msa0483080:intron | 45.0% | |
| AACTGTACCTTTCACCCGAT+GGG | + | chr3_3:90814370-90814389 | None:intergenic | 45.0% | |
| ! | GTGAAAGGTACAGTTCTGTG+TGG | - | chr3_3:90814375-90814394 | Msa0483080:intron | 45.0% |
| GATGGTTTAGATGCACTCTC+TGG | - | chr3_3:90814504-90814523 | Msa0483080:intron | 45.0% | |
| ATTAGGACTGAGCATCAGAC+GGG | + | chr3_3:90815068-90815087 | None:intergenic | 45.0% | |
| CCCGCATCATGAGAATACAA+TGG | + | chr3_3:90815123-90815142 | None:intergenic | 45.0% | |
| CTACTTCCTACTTCGCATCA+TGG | + | chr3_3:90815155-90815174 | None:intergenic | 45.0% | |
| ATGCAAGAGAAAAGGAGGGT+GGG | - | chr3_3:90815311-90815330 | Msa0483080:intron | 45.0% | |
| CAAGTGGGTGGAAAAGCTAT+TGG | + | chr3_3:90815404-90815423 | None:intergenic | 45.0% | |
| CAGTAATGCAAACAAGTGGG+TGG | + | chr3_3:90815416-90815435 | None:intergenic | 45.0% | |
| CACCCACTTGTTTGCATTAC+TGG | - | chr3_3:90815414-90815433 | Msa0483080:intron | 45.0% | |
| ! | AGGGTGACAAGGGTATACAA+TGG | + | chr3_3:90815922-90815941 | None:intergenic | 45.0% |
| CTTCTCTCTCAGGGTATGTT+TGG | + | chr3_3:90816606-90816625 | None:intergenic | 45.0% | |
| CAAACATACCCTGAGAGAGA+AGG | - | chr3_3:90816604-90816623 | Msa0483080:intron | 45.0% | |
| AGATGGATATTGAGGGCTAG+TGG | + | chr3_3:90817011-90817030 | None:intergenic | 45.0% | |
| TATCAAGGCCTCCCATTATG+AGG | - | chr3_3:90817175-90817194 | Msa0483080:intron | 45.0% | |
| ATCAAGGCCTCCCATTATGA+GGG | - | chr3_3:90817176-90817195 | Msa0483080:intron | 45.0% | |
| CCAATCTAGTCCCCTCATAA+TGG | + | chr3_3:90817190-90817209 | None:intergenic | 45.0% | |
| CCATTATGAGGGGACTAGAT+TGG | - | chr3_3:90817187-90817206 | Msa0483080:intron | 45.0% | |
| AAAAAGAGCCTGAGTATGCC+AGG | + | chr3_3:90817292-90817311 | None:intergenic | 45.0% | |
| !! | TTTCCATGACTGCTTTTCCC+AGG | - | chr3_3:90817309-90817328 | Msa0483080:intron | 45.0% |
| TTACCTGGGAAAAGCAGTCA+TGG | + | chr3_3:90817315-90817334 | None:intergenic | 45.0% | |
| AATTCGTAGACAGTGTCCAC+GGG | - | chr3_3:90817855-90817874 | Msa0483080:intron | 45.0% | |
| !! | CCCCGATTTTGATGTACCAT+TGG | - | chr3_3:90818736-90818755 | Msa0483080:CDS | 45.0% |
| GTGCAGTTGCATTGAAGGTT+AGG | + | chr3_3:90818775-90818794 | None:intergenic | 45.0% | |
| !! | TTTAAAAAAATAAAACTATT+CGG | + | chr3_3:90816152-90816171 | None:intergenic | 5.0% |
| !! | TTATATTAAAAATATAAAGA+TGG | - | chr3_3:90817619-90817638 | Msa0483080:intron | 5.0% |
| ACACACCCTGGTGATTCAAG+AGG | + | chr3_3:90812470-90812489 | None:intergenic | 50.0% | |
| GATCCGATGTAAACACACCC+TGG | + | chr3_3:90812482-90812501 | None:intergenic | 50.0% | |
| ! | ATCTATGGTGGAAGAGGTGG+TGG | - | chr3_3:90812686-90812705 | Msa0483080:intron | 50.0% |
| CAACGACATCCCAACTAGGT+TGG | + | chr3_3:90812773-90812792 | None:intergenic | 50.0% | |
| GAGTGTGGACAGACATCAAG+AGG | + | chr3_3:90812799-90812818 | None:intergenic | 50.0% | |
| CCCTCCAAAGAGTTGGAGAT+TGG | - | chr3_3:90813353-90813372 | Msa0483080:intron | 50.0% | |
| CATCGCGAGATAGAGCGATA+AGG | + | chr3_3:90814231-90814250 | None:intergenic | 50.0% | |
| TATCGCTCTATCTCGCGATG+TGG | - | chr3_3:90814231-90814250 | Msa0483080:intron | 50.0% | |
| ATCGCTCTATCTCGCGATGT+GGG | - | chr3_3:90814232-90814251 | Msa0483080:intron | 50.0% | |
| CTCAGTCCTACTTGCAATGC+AGG | + | chr3_3:90814266-90814285 | None:intergenic | 50.0% | |
| GCAAACGGGTAGGTTCAATC+GGG | - | chr3_3:90814336-90814355 | Msa0483080:intron | 50.0% | |
| GAACTGTACCTTTCACCCGA+TGG | + | chr3_3:90814371-90814390 | None:intergenic | 50.0% | |
| TCTAACGGTGCTTGTTCGGT+CGG | + | chr3_3:90814453-90814472 | None:intergenic | 50.0% | |
| CATAGCCCATGATGCGAAGT+AGG | - | chr3_3:90815146-90815165 | Msa0483080:intron | 50.0% | |
| ! | GTAGGAAGTAGCTGACTCCT+TGG | - | chr3_3:90815164-90815183 | Msa0483080:intron | 50.0% |
| CATGCAAGAGAAAAGGAGGG+TGG | - | chr3_3:90815310-90815329 | Msa0483080:intron | 50.0% | |
| TGCGAAGAGATCCAGGAGAA+AGG | - | chr3_3:90815878-90815897 | Msa0483080:intron | 50.0% | |
| GAGAACACAATGTCACCACG+AGG | + | chr3_3:90816820-90816839 | None:intergenic | 50.0% | |
| TCAAGGCCTCCCATTATGAG+GGG | - | chr3_3:90817177-90817196 | Msa0483080:intron | 50.0% | |
| ! | TCTAGTCCCCTCATAATGGG+AGG | + | chr3_3:90817186-90817205 | None:intergenic | 50.0% |
| ! | AAAGATAGTGGCCAAGCTCC+TGG | - | chr3_3:90817271-90817290 | Msa0483080:intron | 50.0% |
| ATCCTGCCAACTTCGCCTTA+AGG | - | chr3_3:90817794-90817813 | Msa0483080:intron | 50.0% | |
| TCCTGCCAACTTCGCCTTAA+GGG | - | chr3_3:90817795-90817814 | Msa0483080:intron | 50.0% | |
| CTCTTCCCTTAAGGCGAAGT+TGG | + | chr3_3:90817803-90817822 | None:intergenic | 50.0% | |
| CAACTTCGCCTTAAGGGAAG+AGG | - | chr3_3:90817801-90817820 | Msa0483080:intron | 50.0% | |
| AGGCTGTCTCTTCTTCCCAA+TGG | + | chr3_3:90818755-90818774 | None:intergenic | 50.0% | |
| GTCTGGTGCAGTTGCATTGA+AGG | + | chr3_3:90818780-90818799 | None:intergenic | 50.0% | |
| ! | TCTTTCTGGGCGCACACTTT+TGG | - | chr3_3:90818883-90818902 | Msa0483080:CDS | 50.0% |
| ! | GGTGGCATCTATGGTGGAAG+AGG | - | chr3_3:90812680-90812699 | Msa0483080:intron | 55.0% |
| ! | GGCATCTATGGTGGAAGAGG+TGG | - | chr3_3:90812683-90812702 | Msa0483080:intron | 55.0% |
| TCGCTCTATCTCGCGATGTG+GGG | - | chr3_3:90814233-90814252 | Msa0483080:intron | 55.0% | |
| !! | TTTCGGGTTGTAGGCGGGTT+CGG | + | chr3_3:90814297-90814316 | None:intergenic | 55.0% |
| !!! | GGGTTTTTCGGGTTGTAGGC+GGG | + | chr3_3:90814302-90814321 | None:intergenic | 55.0% |
| !!! | CGGGTTTTTCGGGTTGTAGG+CGG | + | chr3_3:90814303-90814322 | None:intergenic | 55.0% |
| AATCGGGTTTGTCGGCCCAT+CGG | - | chr3_3:90814352-90814371 | Msa0483080:intron | 55.0% | |
| CTAACGGTGCTTGTTCGGTC+GGG | + | chr3_3:90814452-90814471 | None:intergenic | 55.0% | |
| ACGATTTGAGCGGGCGGTTT+GGG | + | chr3_3:90814929-90814948 | None:intergenic | 55.0% | |
| !! | GCGTCGGATTAGTCGGATGA+CGG | + | chr3_3:90814964-90814983 | None:intergenic | 55.0% |
| !! | GTGTGAGGCGTCGGATTAGT+CGG | + | chr3_3:90814971-90814990 | None:intergenic | 55.0% |
| GACTAATCCGACGCCTCACA+CGG | - | chr3_3:90814970-90814989 | Msa0483080:intron | 55.0% | |
| ! | ACTGAGCATCAGACGGGTTC+GGG | + | chr3_3:90815062-90815081 | None:intergenic | 55.0% |
| ! | GACTGAGCATCAGACGGGTT+CGG | + | chr3_3:90815063-90815082 | None:intergenic | 55.0% |
| GCTGATGTGCGAAGAGATCC+AGG | - | chr3_3:90815871-90815890 | Msa0483080:intron | 55.0% | |
| TGCACGTTATGGAAGCCTCG+TGG | - | chr3_3:90816802-90816821 | Msa0483080:intron | 55.0% | |
| TCCCTTAAGGCGAAGTTGGC+AGG | + | chr3_3:90817799-90817818 | None:intergenic | 55.0% | |
| ! | TCACGGGGTGCCAACCTAGT+TGG | - | chr3_3:90812760-90812779 | Msa0483080:intron | 60.0% |
| ! | CACGGGGTGCCAACCTAGTT+GGG | - | chr3_3:90812761-90812780 | Msa0483080:intron | 60.0% |
| ATCGGGTTTGTCGGCCCATC+GGG | - | chr3_3:90814353-90814372 | Msa0483080:intron | 60.0% | |
| TTGTCGGCCCATCGGGTGAA+AGG | - | chr3_3:90814360-90814379 | Msa0483080:intron | 60.0% | |
| GGTGCTTGTTCGGTCGGGTA+CGG | + | chr3_3:90814447-90814466 | None:intergenic | 60.0% | |
| ! | TTTGAGCGGGCGGTTTGGGT+CGG | + | chr3_3:90814925-90814944 | None:intergenic | 60.0% |
| GACGATTTGAGCGGGCGGTT+TGG | + | chr3_3:90814930-90814949 | None:intergenic | 60.0% | |
| ! | AGTCGGATGACGGTTTGCGC+CGG | + | chr3_3:90814954-90814973 | None:intergenic | 60.0% |
| AATCCGACGCCTCACACGGT+CGG | - | chr3_3:90814974-90814993 | Msa0483080:intron | 60.0% | |
| CAACCATCTCCGACCGTGTG+AGG | + | chr3_3:90814986-90815005 | None:intergenic | 60.0% | |
| GCCAAGCTCCTGGCATACTC+AGG | - | chr3_3:90817281-90817300 | Msa0483080:intron | 60.0% | |
| GCCTGAGTATGCCAGGAGCT+TGG | + | chr3_3:90817285-90817304 | None:intergenic | 60.0% | |
| ! | TCCACGGGTTGTCTCGTGTG+CGG | - | chr3_3:90817870-90817889 | Msa0483080:intron | 60.0% |
| TGCGGACATACTCGTCCTCG+CGG | - | chr3_3:90817888-90817907 | Msa0483080:intron | 60.0% | |
| GGCACGAGAAGCTGTTCGTC+AGG | - | chr3_3:90817909-90817928 | Msa0483080:intron | 60.0% | |
| ! | TGCGCCGGCGACGATTTGAG+CGG | + | chr3_3:90814939-90814958 | None:intergenic | 65.0% |
| TCTCCGACCGTGTGAGGCGT+CGG | + | chr3_3:90814980-90814999 | None:intergenic | 65.0% | |
| ACGCCTCACACGGTCGGAGA+TGG | - | chr3_3:90814980-90814999 | Msa0483080:intron | 65.0% | |
| ! | AGCATCAGACGGGTTCGGGC+GGG | + | chr3_3:90815058-90815077 | None:intergenic | 65.0% |
| ! | GAGCATCAGACGGGTTCGGG+CGG | + | chr3_3:90815059-90815078 | None:intergenic | 65.0% |
| TCCGCACACGAGACAACCCG+TGG | + | chr3_3:90817874-90817893 | None:intergenic | 65.0% | |
| GAACAGCTTCTCGTGCCGCG+AGG | + | chr3_3:90817906-90817925 | None:intergenic | 65.0% | |
| CCGGCGACGATTTGAGCGGG+CGG | + | chr3_3:90814935-90814954 | None:intergenic | 70.0% | |
| CCGCCCGCTCAAATCGTCGC+CGG | - | chr3_3:90814932-90814951 | Msa0483080:intron | 70.0% | |
| ! | GCGCCGGCGACGATTTGAGC+GGG | + | chr3_3:90814938-90814957 | None:intergenic | 70.0% |
| ! | CAGACGGGTTCGGGCGGGAT+CGG | + | chr3_3:90815053-90815072 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 90812453 | 90818961 | 90812453 | ID=Msa0483080;Name=Msa0483080 |
| chr3_3 | mRNA | 90812453 | 90818961 | 90812453 | ID=Msa0483080-mRNA-1;Parent=Msa0483080;Name=Msa0483080-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|0.5|1|3|0|206 |
| chr3_3 | exon | 90818713 | 90818961 | 90818713 | ID=Msa0483080-mRNA-1:exon:26534;Parent=Msa0483080-mRNA-1 |
| chr3_3 | exon | 90813538 | 90813675 | 90813538 | ID=Msa0483080-mRNA-1:exon:26533;Parent=Msa0483080-mRNA-1 |
| chr3_3 | exon | 90812453 | 90812686 | 90812453 | ID=Msa0483080-mRNA-1:exon:26532;Parent=Msa0483080-mRNA-1 |
| chr3_3 | CDS | 90818713 | 90818961 | 90818713 | ID=Msa0483080-mRNA-1:cds;Parent=Msa0483080-mRNA-1 |
| chr3_3 | CDS | 90813538 | 90813675 | 90813538 | ID=Msa0483080-mRNA-1:cds;Parent=Msa0483080-mRNA-1 |
| chr3_3 | CDS | 90812453 | 90812686 | 90812453 | ID=Msa0483080-mRNA-1:cds;Parent=Msa0483080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
