Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516810 | AES72615.1 | 97.091 | 275 | 2 | 2 | 1 | 271 | 108 | 380 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516810 | sp|A2RVS6|SR34A_ARATH | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.57e-113 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516810 | G7J8Y2 | 97.091 | 275 | 2 | 2 | 1 | 271 | 108 | 380 | 0.0 | 518 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208290 | Msa0516810 | 0.805117 | 1.558452e-49 | -8.615850e-47 |
| Msa0229150 | Msa0516810 | 0.828054 | 1.112654e-54 | -8.615850e-47 |
| Msa0376830 | Msa0516810 | 0.839942 | 1.171642e-57 | -8.615850e-47 |
| Msa0425640 | Msa0516810 | 0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa0516810 | Msa0524110 | 0.829704 | 4.435823e-55 | -8.615850e-47 |
| Msa0516810 | Msa0698780 | 0.802239 | 6.165805e-49 | -8.615850e-47 |
| Msa0516810 | Msa1021470 | 0.807914 | 4.004448e-50 | -8.615850e-47 |
| Msa0516810 | Msa1085420 | 0.850602 | 1.527178e-60 | -8.615850e-47 |
| Msa0516810 | Msa1362210 | 0.824403 | 8.227205e-54 | -8.615850e-47 |
| Msa0516810 | Msa1364480 | 0.813672 | 2.273320e-51 | -8.615850e-47 |
| Msa0516810 | Msa1365140 | 0.835827 | 1.337414e-56 | -8.615850e-47 |
| Msa0516810 | Msa1367890 | 0.808375 | 3.194189e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516810 | MtrunA17_Chr3g0127781 | 97.091 | 275 | 2 | 2 | 1 | 271 | 1 | 273 | 0.0 | 513 |
| Msa0516810 | MtrunA17_Chr1g0192221 | 59.041 | 271 | 98 | 2 | 1 | 270 | 32 | 290 | 1.03e-87 | 263 |
| Msa0516810 | MtrunA17_Chr7g0269331 | 66.667 | 213 | 56 | 3 | 1 | 213 | 1 | 198 | 1.67e-87 | 262 |
| Msa0516810 | MtrunA17_Chr7g0272311 | 61.111 | 234 | 74 | 2 | 1 | 234 | 1 | 217 | 4.44e-86 | 258 |
| Msa0516810 | MtrunA17_Chr1g0195251 | 60.185 | 216 | 73 | 2 | 1 | 215 | 1 | 204 | 3.81e-80 | 248 |
| Msa0516810 | MtrunA17_Chr3g0139061 | 44.737 | 76 | 36 | 2 | 9 | 84 | 4 | 73 | 4.72e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516810 | AT3G49430.5 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.62e-114 | 331 |
| Msa0516810 | AT3G49430.4 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.62e-114 | 331 |
| Msa0516810 | AT3G49430.7 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.62e-114 | 331 |
| Msa0516810 | AT3G49430.1 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.62e-114 | 331 |
| Msa0516810 | AT3G49430.3 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.62e-114 | 331 |
| Msa0516810 | AT3G49430.6 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 2.62e-114 | 331 |
| Msa0516810 | AT3G49430.2 | 85.500 | 200 | 28 | 1 | 1 | 200 | 1 | 199 | 3.62e-114 | 330 |
| Msa0516810 | AT1G02840.1 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 9.55e-87 | 261 |
| Msa0516810 | AT1G02840.4 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 3.01e-86 | 258 |
| Msa0516810 | AT1G02840.5 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 3.01e-86 | 258 |
| Msa0516810 | AT1G02840.3 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 3.01e-86 | 258 |
| Msa0516810 | AT1G02840.2 | 69.194 | 211 | 58 | 2 | 1 | 211 | 1 | 204 | 5.12e-86 | 258 |
| Msa0516810 | AT1G09140.1 | 63.507 | 211 | 60 | 2 | 1 | 211 | 1 | 194 | 6.10e-85 | 255 |
| Msa0516810 | AT1G09140.2 | 63.507 | 211 | 60 | 2 | 1 | 211 | 1 | 194 | 6.89e-85 | 254 |
| Msa0516810 | AT1G09140.3 | 57.143 | 245 | 82 | 2 | 1 | 245 | 1 | 222 | 4.40e-81 | 244 |
| Msa0516810 | AT4G02430.3 | 65.500 | 200 | 63 | 2 | 1 | 200 | 1 | 194 | 9.06e-78 | 237 |
| Msa0516810 | AT4G02430.4 | 65.500 | 200 | 63 | 2 | 1 | 200 | 1 | 194 | 1.85e-77 | 237 |
| Msa0516810 | AT4G02430.1 | 67.039 | 179 | 56 | 1 | 1 | 179 | 1 | 176 | 7.82e-71 | 216 |
| Msa0516810 | AT4G02430.2 | 62.286 | 175 | 60 | 2 | 26 | 200 | 24 | 192 | 6.73e-61 | 194 |
| Msa0516810 | AT3G61860.1 | 26.291 | 213 | 125 | 5 | 7 | 217 | 2 | 184 | 1.80e-12 | 66.2 |
| Msa0516810 | AT2G46610.1 | 29.444 | 180 | 94 | 6 | 7 | 184 | 2 | 150 | 1.55e-11 | 63.2 |
| Msa0516810 | AT2G37340.1 | 41.304 | 92 | 48 | 2 | 9 | 99 | 13 | 99 | 5.63e-11 | 62.0 |
Find 154 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAATTGAATTAAAATTTA+AGG | 0.118594 | 3_4:+68354395 | None:intergenic |
| CTCTTCAAGGATTGCTCTCT+TGG | 0.179428 | 3_4:-68353465 | Msa0516810:intron |
| AGTTGATTTGAATTATTTAA+TGG | 0.187512 | 3_4:-68349643 | Msa0516810:three_prime_UTR |
| TGCTCAAGCTGTAATCTTTC+TGG | 0.210621 | 3_4:-68354446 | Msa0516810:five_prime_UTR |
| ACTTTGATGGTTGTCGATTA+AGG | 0.211961 | 3_4:-68352403 | Msa0516810:CDS |
| TAGACTTGCTGCTACCATTT+TGG | 0.218456 | 3_4:-68349551 | Msa0516810:three_prime_UTR |
| CTAAAGCTCCTGCATTATTC+TGG | 0.228945 | 3_4:-68349685 | Msa0516810:three_prime_UTR |
| TTCATTCTGCAGTAGATCTT+TGG | 0.248661 | 3_4:-68350348 | Msa0516810:intron |
| CCTGCATTATTCTGGGATAT+TGG | 0.260468 | 3_4:-68349677 | Msa0516810:three_prime_UTR |
| TTATAGCTTTGGAGCATCTT+TGG | 0.264980 | 3_4:-68353518 | Msa0516810:five_prime_UTR |
| AGAGTGGGAGTGGGAGAATC+GGG | 0.288409 | 3_4:-68353654 | Msa0516810:five_prime_UTR |
| TTTCGGACTTCTGCTCCTGC+TGG | 0.293656 | 3_4:+68350465 | None:intergenic |
| GACTTCAGTTTCGCTGCGAT+TGG | 0.299037 | 3_4:-68354470 | Msa0516810:five_prime_UTR |
| GGTGGTGGTGGCGGCGGTGG+TGG | 0.302105 | 3_4:-68352252 | Msa0516810:CDS |
| TGACCCACGTTGTTTGCTAT+TGG | 0.309052 | 3_4:-68354252 | Msa0516810:five_prime_UTR |
| CGGCGGTGACGGTGCTGGTG+GGG | 0.314004 | 3_4:-68352220 | Msa0516810:CDS |
| GACCCACGTTGTTTGCTATT+GGG | 0.315856 | 3_4:-68354251 | Msa0516810:five_prime_UTR |
| CTTGATTGGTGATGCTGATC+TGG | 0.325826 | 3_4:+68350283 | None:intergenic |
| TTTCAATATTGTTATAGCTT+TGG | 0.337792 | 3_4:-68353529 | Msa0516810:five_prime_UTR |
| CAAATGCTAATGGTATTTAT+AGG | 0.339046 | 3_4:+68349461 | None:intergenic |
| TATGGTGGTGGTGGCGGCGG+TGG | 0.349227 | 3_4:-68352255 | Msa0516810:CDS |
| GGCGGTGGTGGCAGAGGCGG+CGG | 0.350418 | 3_4:-68352240 | Msa0516810:CDS |
| CTTTGATGGTTGTCGATTAA+GGG | 0.353926 | 3_4:-68352402 | Msa0516810:intron |
| CTTGGGCGAGATCATATATT+CGG | 0.363557 | 3_4:-68350840 | Msa0516810:CDS |
| GGTGGCGGCGGTGGTGGCAG+AGG | 0.366433 | 3_4:-68352246 | Msa0516810:CDS |
| GCCGCAGCAGAAGCCCCAGC+AGG | 0.370082 | 3_4:-68350480 | Msa0516810:CDS |
| GGCGGTGACGGTGCTGGTGG+GGG | 0.372949 | 3_4:-68352219 | Msa0516810:CDS |
| AGATGCTGAAGATGCAATTC+GGG | 0.378655 | 3_4:-68352441 | Msa0516810:CDS |
| TTCGGACTTCTGCTCCTGCT+GGG | 0.379407 | 3_4:+68350466 | None:intergenic |
| GAGATGCTGAAGATGCAATT+CGG | 0.381400 | 3_4:-68352442 | Msa0516810:CDS |
| TATCAGTTTGGTTACTCTGT+AGG | 0.382172 | 3_4:-68349587 | Msa0516810:three_prime_UTR |
| ATATACCTGGCAGGCTTGAT+TGG | 0.384601 | 3_4:+68350269 | None:intergenic |
| ATCAGTTTGGTTACTCTGTA+GGG | 0.386960 | 3_4:-68349586 | Msa0516810:three_prime_UTR |
| TAGAGTGGGAGTGGGAGAAT+CGG | 0.396607 | 3_4:-68353655 | Msa0516810:five_prime_UTR |
| GGCGGCGGTGACGGTGCTGG+TGG | 0.397097 | 3_4:-68352222 | Msa0516810:CDS |
| GGCAGAGGCGGCGGCGGTGA+CGG | 0.399302 | 3_4:-68352231 | Msa0516810:CDS |
| TGCATCCTGGCAGGATTTGA+AGG | 0.403388 | 3_4:-68351691 | Msa0516810:intron |
| GGGTATGGTGGTGGTGGCGG+CGG | 0.404796 | 3_4:-68352258 | Msa0516810:CDS |
| GGCGGCGGTGGTGGCAGAGG+CGG | 0.408001 | 3_4:-68352243 | Msa0516810:CDS |
| GCGGCGGTGACGGTGCTGGT+GGG | 0.412764 | 3_4:-68352221 | Msa0516810:CDS |
| TGGTGATGCTGATCTGGATC+TGG | 0.412986 | 3_4:+68350289 | None:intergenic |
| ATGATGGCCCTCTGCCTCCA+TGG | 0.413987 | 3_4:+68352295 | None:intergenic |
| TTAACAGTATGGCCGCATAA+TGG | 0.418415 | 3_4:-68352619 | Msa0516810:intron |
| AAAATGTCTCCAAATGCTAA+TGG | 0.420292 | 3_4:+68349451 | None:intergenic |
| TACTCTTGATGCTGTTCTCA+TGG | 0.421071 | 3_4:-68349299 | Msa0516810:three_prime_UTR |
| TTTACTACAGTTATTGTTCG+TGG | 0.425107 | 3_4:-68351726 | Msa0516810:intron |
| GAGCTTGCCCATGGAGGCAG+AGG | 0.428432 | 3_4:-68352303 | Msa0516810:CDS |
| GTGGAGCACGGCTCTCTTCA+AGG | 0.429609 | 3_4:-68353478 | Msa0516810:five_prime_UTR |
| CTATAAATACCATTAGCATT+TGG | 0.435182 | 3_4:-68349460 | Msa0516810:three_prime_UTR |
| GCTGAACGTGATGGTGATCT+TGG | 0.439286 | 3_4:+68350164 | None:intergenic |
| CTCAAAACCCTAATTCAAAA+CGG | 0.439522 | 3_4:+68354348 | None:intergenic |
| CATAATGGAAATTGAATTGA+AGG | 0.441407 | 3_4:-68352604 | Msa0516810:CDS |
| CGTGGGTATGGTGGTGGTGG+CGG | 0.441938 | 3_4:-68352261 | Msa0516810:CDS |
| GGCGGCGGCGGTGACGGTGC+TGG | 0.443757 | 3_4:-68352225 | Msa0516810:CDS |
| CGTGATGGTTACAACTTTGA+TGG | 0.445163 | 3_4:-68352416 | Msa0516810:CDS |
| CCCATCTTCTGCATCCTGGC+AGG | 0.446763 | 3_4:-68351700 | Msa0516810:CDS |
| TGCTGATCTGGATCTGGATC+TGG | 0.447648 | 3_4:+68350295 | None:intergenic |
| GCAGGAGCAGAAGTCCGAAA+AGG | 0.447779 | 3_4:-68350462 | Msa0516810:CDS |
| AAGCGTTTGTTTAGAGTGGT+TGG | 0.451223 | 3_4:-68349406 | Msa0516810:three_prime_UTR |
| GGTGGTGGCAGAGGCGGCGG+CGG | 0.454844 | 3_4:-68352237 | Msa0516810:CDS |
| TGAATTAAAATTTAAGGAGA+AGG | 0.455354 | 3_4:+68354401 | None:intergenic |
| TAGGGAATATAGAGTGGGAG+TGG | 0.456391 | 3_4:-68353664 | Msa0516810:five_prime_UTR |
| CAAGAACAGTCTAATAAAGC+AGG | 0.456970 | 3_4:+68349358 | None:intergenic |
| TCAAAACCCTAATTCAAAAC+GGG | 0.462516 | 3_4:+68354349 | None:intergenic |
| TCCTGCCAGGATGCAGAAGA+TGG | 0.465406 | 3_4:+68351699 | None:intergenic |
| CACCGAGTTTAGAAATCCTT+GGG | 0.466660 | 3_4:-68350857 | Msa0516810:CDS |
| CAGGAGCAGAAGTCCGAAAA+GGG | 0.468055 | 3_4:-68350461 | Msa0516810:CDS |
| TAAAGCTCCTGCATTATTCT+GGG | 0.469332 | 3_4:-68349684 | Msa0516810:three_prime_UTR |
| TGAGCTTTGCTATCAAACAT+AGG | 0.469789 | 3_4:-68353683 | Msa0516810:five_prime_UTR |
| TCTCGCCATTCTGAATTTCG+AGG | 0.470048 | 3_4:-68352183 | Msa0516810:intron |
| ACTTCAGTTTCGCTGCGATT+GGG | 0.471440 | 3_4:-68354469 | Msa0516810:five_prime_UTR |
| ATAGACAGAGAAGACCAAAA+TGG | 0.474107 | 3_4:+68349537 | None:intergenic |
| TCCCTCTCTCTCGAATTCGC+AGG | 0.475095 | 3_4:-68354510 | Msa0516810:five_prime_UTR |
| GGAGAATCGGGGTGGAGTTG+TGG | 0.477940 | 3_4:-68353642 | Msa0516810:five_prime_UTR |
| GAATTAAAATTTAAGGAGAA+GGG | 0.478591 | 3_4:+68354402 | None:intergenic |
| GACTCCCATCTTCTGCATCC+TGG | 0.479983 | 3_4:-68351704 | Msa0516810:CDS |
| ACACCGAGTTTAGAAATCCT+TGG | 0.480051 | 3_4:-68350858 | Msa0516810:CDS |
| TGATGGCCCTCTGCCTCCAT+GGG | 0.481565 | 3_4:+68352296 | None:intergenic |
| GAGCTTTGCTATCAAACATA+GGG | 0.482977 | 3_4:-68353682 | Msa0516810:five_prime_UTR |
| TGTCTATTAAACATGAATGT+TGG | 0.486676 | 3_4:-68349521 | Msa0516810:three_prime_UTR |
| CATCACCAATCAAGCCTGCC+AGG | 0.494990 | 3_4:-68350274 | Msa0516810:intron |
| AGACGTGGGTATGGTGGTGG+TGG | 0.495715 | 3_4:-68352264 | Msa0516810:CDS |
| TTTAATGGATAATTATGTAC+CGG | 0.499518 | 3_4:-68349628 | Msa0516810:three_prime_UTR |
| TGATACCTTCAAATCCTGCC+AGG | 0.500259 | 3_4:+68351686 | None:intergenic |
| AAATAAGCGTTTGTTTAGAG+TGG | 0.502378 | 3_4:-68349410 | Msa0516810:three_prime_UTR |
| AGTATGAGAGCAGTCGTTCA+AGG | 0.508477 | 3_4:-68350504 | Msa0516810:CDS |
| AATAGCAAACAACGTGGGTC+AGG | 0.510396 | 3_4:+68354254 | None:intergenic |
| TCCTGCTGGGGCTTCTGCTG+CGG | 0.520416 | 3_4:+68350479 | None:intergenic |
| CCCTCTCTCTCGAATTCGCA+GGG | 0.523894 | 3_4:-68354509 | Msa0516810:five_prime_UTR |
| TCAAGTGACAGACGTGGGTA+TGG | 0.524129 | 3_4:-68352273 | Msa0516810:CDS |
| TATGATAGATGACAAGCGCT+TGG | 0.525862 | 3_4:-68353713 | Msa0516810:intron |
| ATGAATGTTGGATATTTGCC+TGG | 0.526253 | 3_4:-68349509 | Msa0516810:intron |
| AATTGAAGATCTGTTCTACA+AGG | 0.526628 | 3_4:-68353205 | Msa0516810:intron |
| TTGCAGGTTCTGTCTGGTAG+CGG | 0.530230 | 3_4:-68349733 | Msa0516810:intron |
| CAGGATCATATGCGAAAAGC+TGG | 0.535111 | 3_4:-68351584 | Msa0516810:CDS |
| CCAATATCCCAGAATAATGC+AGG | 0.535632 | 3_4:+68349677 | None:intergenic |
| AGCGAAACTGAAGTCGAAGC+TGG | 0.537136 | 3_4:+68354478 | None:intergenic |
| CTTTGGAGCGATCTGTGTCT+AGG | 0.537173 | 3_4:-68350331 | Msa0516810:CDS |
| AAATTTGATCTCATTTCCAT+CGG | 0.538699 | 3_4:-68354323 | Msa0516810:five_prime_UTR |
| TCTGATTCTCTTATATCAGC+GGG | 0.538836 | 3_4:+68353228 | None:intergenic |
| TCGGACTTCTGCTCCTGCTG+GGG | 0.539897 | 3_4:+68350467 | None:intergenic |
| TTGTAGGTGGAGCTTGCCCA+TGG | 0.543564 | 3_4:-68352312 | Msa0516810:intron |
| CGCCCAAGGATTTCTAAACT+CGG | 0.544119 | 3_4:+68350855 | None:intergenic |
| ATGTGTACCTTCACTGTCAC+GGG | 0.544426 | 3_4:+68351538 | None:intergenic |
| GATTCTTCCTCACTCTCAGA+AGG | 0.544460 | 3_4:-68353598 | Msa0516810:five_prime_UTR |
| CCACGTCTGTCACTTGATGA+TGG | 0.546991 | 3_4:+68352279 | None:intergenic |
| AATAACTTTATATACCTGGC+AGG | 0.549603 | 3_4:+68350260 | None:intergenic |
| TCAATTCAATTTCCATTATG+CGG | 0.550277 | 3_4:+68352607 | None:intergenic |
| GAAGGGGATGATTCTATGTA+CGG | 0.554973 | 3_4:+68354419 | None:intergenic |
| TTGGGCGAGATCATATATTC+GGG | 0.556218 | 3_4:-68350839 | Msa0516810:intron |
| AATTAAAATTTAAGGAGAAG+GGG | 0.558872 | 3_4:+68354403 | None:intergenic |
| TTCTGATTCTCTTATATCAG+CGG | 0.559626 | 3_4:+68353227 | None:intergenic |
| CCTGCCAGGATGCAGAAGAT+GGG | 0.560764 | 3_4:+68351700 | None:intergenic |
| GATGCAATTCGGGGTCGTGA+TGG | 0.566481 | 3_4:-68352431 | Msa0516810:CDS |
| GTCTCCACGATCACCACGCC+AGG | 0.568223 | 3_4:-68350141 | Msa0516810:intron |
| ATTCTCTTATATCAGCGGGC+AGG | 0.571374 | 3_4:+68353232 | None:intergenic |
| GACAGACGTGGGTATGGTGG+TGG | 0.572890 | 3_4:-68352267 | Msa0516810:CDS |
| GAAGTCCGAAAAGGGCCAGA+AGG | 0.575911 | 3_4:-68350453 | Msa0516810:intron |
| AAACAATAACATGGAGGGCG+AGG | 0.577762 | 3_4:+68352576 | None:intergenic |
| AATACCTGGCGTGGTGATCG+TGG | 0.578656 | 3_4:+68350137 | None:intergenic |
| TGGGAGTGGGAGAATCGGGG+TGG | 0.581089 | 3_4:-68353650 | Msa0516810:five_prime_UTR |
| TCCCTGCGAATTCGAGAGAG+AGG | 0.582116 | 3_4:+68354508 | None:intergenic |
| AATGTGTACCTTCACTGTCA+CGG | 0.584101 | 3_4:+68351537 | None:intergenic |
| CAAACATAGGGAATATAGAG+TGG | 0.584846 | 3_4:-68353670 | Msa0516810:five_prime_UTR |
| GAGTGGGAGTGGGAGAATCG+GGG | 0.585350 | 3_4:-68353653 | Msa0516810:five_prime_UTR |
| AGCGATCTGTGTCTAGGTCA+CGG | 0.589459 | 3_4:-68350325 | Msa0516810:CDS |
| CATAATTAGTGTAATCAACA+AGG | 0.593738 | 3_4:+68351010 | None:intergenic |
| CGAATATATGATCTCGCCCA+AGG | 0.595825 | 3_4:+68350841 | None:intergenic |
| TCAAACTTGGAGCTCACCGA+TGG | 0.597241 | 3_4:+68354307 | None:intergenic |
| ATGAGCAATGGAGTGGAGCA+CGG | 0.597948 | 3_4:-68353490 | Msa0516810:five_prime_UTR |
| AGGGAATATAGAGTGGGAGT+GGG | 0.601227 | 3_4:-68353663 | Msa0516810:five_prime_UTR |
| TCTTTGGAGCAAATGAGCAA+TGG | 0.611080 | 3_4:-68353502 | Msa0516810:five_prime_UTR |
| ACCTCAACAAAACAATAACA+TGG | 0.614465 | 3_4:+68352567 | None:intergenic |
| GCATAATCCTTCTGAGAGTG+AGG | 0.616457 | 3_4:+68353591 | None:intergenic |
| GAAGTTTCCCGTGACAGTGA+AGG | 0.619160 | 3_4:-68351545 | Msa0516810:intron |
| TCAGCTTTAAATACCTGGCG+TGG | 0.620343 | 3_4:+68350128 | None:intergenic |
| AAACATAGGGAATATAGAGT+GGG | 0.621440 | 3_4:-68353669 | Msa0516810:five_prime_UTR |
| CCCTGCGAATTCGAGAGAGA+GGG | 0.622597 | 3_4:+68354509 | None:intergenic |
| CAACAAAACAATAACATGGA+GGG | 0.622678 | 3_4:+68352571 | None:intergenic |
| AAGAACAGTCTAATAAAGCA+GGG | 0.626782 | 3_4:+68349359 | None:intergenic |
| CAATAACATGGAGGGCGAGG+AGG | 0.631600 | 3_4:+68352579 | None:intergenic |
| GGAGCAAATGAGCAATGGAG+TGG | 0.639172 | 3_4:-68353497 | Msa0516810:five_prime_UTR |
| AGCTTGCCCATGGAGGCAGA+GGG | 0.639574 | 3_4:-68352302 | Msa0516810:CDS |
| ACACACCTCGAAATTCAGAA+TGG | 0.647364 | 3_4:+68352178 | None:intergenic |
| CCATCATCAAGTGACAGACG+TGG | 0.656324 | 3_4:-68352279 | Msa0516810:CDS |
| TAGGTGGAGCTTGCCCATGG+AGG | 0.659359 | 3_4:-68352309 | Msa0516810:CDS |
| AATGGCGAGAGATACCAAAA+CGG | 0.663145 | 3_4:+68352196 | None:intergenic |
| CGTGGAGACGCTGAACGTGA+TGG | 0.668695 | 3_4:+68350155 | None:intergenic |
| AGTGACAGACGTGGGTATGG+TGG | 0.681415 | 3_4:-68352270 | Msa0516810:CDS |
| TCAACAAAACAATAACATGG+AGG | 0.687199 | 3_4:+68352570 | None:intergenic |
| GATGCTGAAGATGCAATTCG+GGG | 0.704956 | 3_4:-68352440 | Msa0516810:CDS |
| CATCATCAAGTGACAGACGT+GGG | 0.724844 | 3_4:-68352278 | Msa0516810:CDS |
| CACCCAATAGCAAACAACGT+GGG | 0.738524 | 3_4:+68354249 | None:intergenic |
| GCACCCAATAGCAAACAACG+TGG | 0.777486 | 3_4:+68354248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTATTAATATTTTTA+TGG | - | chr3_4:68352408-68352427 | Msa0516810:CDS | 0.0% |
| !!! | TGGTTATTTTTTTAAATAAT+TGG | - | chr3_4:68350154-68350173 | Msa0516810:CDS | 10.0% |
| !!! | TTTTTCATAATAATAAAGAA+TGG | - | chr3_4:68353699-68353718 | Msa0516810:five_prime_UTR | 10.0% |
| !! | GTTAAATCAATATATATTAA+AGG | - | chr3_4:68353750-68353769 | Msa0516810:intron | 10.0% |
| !! | ATTGTAAAAAAATTCAAACT+TGG | + | chr3_4:68349485-68349504 | None:intergenic | 15.0% |
| !! | CTAGTTTAATCAATAAAAAA+GGG | - | chr3_4:68349932-68349951 | Msa0516810:intron | 15.0% |
| !! | TAGTTTAATCAATAAAAAAG+GGG | - | chr3_4:68349933-68349952 | Msa0516810:intron | 15.0% |
| !!! | TTTAATTTTTGTTTAATGAC+TGG | - | chr3_4:68350775-68350794 | Msa0516810:intron | 15.0% |
| !!! | TGCATTTTTATTTTTCATTT+AGG | - | chr3_4:68351701-68351720 | Msa0516810:CDS | 15.0% |
| !!! | ATTAAAATTTTCTGTCAAAA+AGG | - | chr3_4:68351778-68351797 | Msa0516810:intron | 15.0% |
| !! | ATTAATTTAATACAAAACAG+AGG | + | chr3_4:68352393-68352412 | None:intergenic | 15.0% |
| !! | AAAATATGTTAGAAAACATA+TGG | + | chr3_4:68352871-68352890 | None:intergenic | 15.0% |
| !!! | CGTGATAATATTTTTTTTAA+TGG | - | chr3_4:68353039-68353058 | Msa0516810:intron | 15.0% |
| !!! | ATTTCCTTATTTTTTTTTAC+CGG | - | chr3_4:68353914-68353933 | Msa0516810:intron | 15.0% |
| !!! | AGTTGATTTGAATTATTTAA+TGG | - | chr3_4:68354133-68354152 | Msa0516810:intron | 15.0% |
| !! | AATTAAAATTTAAGGAGAAG+GGG | + | chr3_4:68349376-68349395 | None:intergenic | 20.0% |
| !! | GAATTAAAATTTAAGGAGAA+GGG | + | chr3_4:68349377-68349396 | None:intergenic | 20.0% |
| !! | TGAATTAAAATTTAAGGAGA+AGG | + | chr3_4:68349378-68349397 | None:intergenic | 20.0% |
| !! | TCAATAATAACTAAGACATA+CGG | + | chr3_4:68349608-68349627 | None:intergenic | 20.0% |
| !! | TAGTGTGTATAAAATCAATA+AGG | - | chr3_4:68349823-68349842 | Msa0516810:intron | 20.0% |
| !! | AGTGTGTATAAAATCAATAA+GGG | - | chr3_4:68349824-68349843 | Msa0516810:intron | 20.0% |
| !!! | GCTAGTTTAATCAATAAAAA+AGG | - | chr3_4:68349931-68349950 | Msa0516810:intron | 20.0% |
| !! | AGTTTAATCAATAAAAAAGG+GGG | - | chr3_4:68349934-68349953 | Msa0516810:intron | 20.0% |
| !! | TTTCAATATTGTTATAGCTT+TGG | - | chr3_4:68350247-68350266 | Msa0516810:intron | 20.0% |
| !! | TTGTAACCAAATAAAAAACA+TGG | - | chr3_4:68351675-68351694 | Msa0516810:intron | 20.0% |
| !! | ATGATAAACATGATATTAGT+CGG | + | chr3_4:68351745-68351764 | None:intergenic | 20.0% |
| !! | AAAAAAAGACTAAGATACTA+TGG | + | chr3_4:68352027-68352046 | None:intergenic | 20.0% |
| !! | AAACCAAATATTAAAACTGT+AGG | + | chr3_4:68352172-68352191 | None:intergenic | 20.0% |
| !! | CAACAACATAAATATAGAAA+AGG | + | chr3_4:68352306-68352325 | None:intergenic | 20.0% |
| !! | TCTATATTTATGTTGTTGTA+TGG | - | chr3_4:68352308-68352327 | Msa0516810:CDS | 20.0% |
| !!! | ATTAATATTTTTATGGCTTG+AGG | - | chr3_4:68352415-68352434 | Msa0516810:CDS | 20.0% |
| !! | AACGAATATCGTATAAATTT+GGG | + | chr3_4:68352836-68352855 | None:intergenic | 20.0% |
| !! | AAACGAATATCGTATAAATT+TGG | + | chr3_4:68352837-68352856 | None:intergenic | 20.0% |
| !!! | TATTTTCTTTTTCACAGATT+CGG | - | chr3_4:68352885-68352904 | Msa0516810:intron | 20.0% |
| !! | TATAAATGTTATTACAGATC+TGG | + | chr3_4:68352966-68352985 | None:intergenic | 20.0% |
| !! | ATAAGTATGTCTAAACTAAA+AGG | + | chr3_4:68353390-68353409 | None:intergenic | 20.0% |
| !! | GTATATAAAGTTATTAGACA+TGG | - | chr3_4:68353524-68353543 | Msa0516810:five_prime_UTR | 20.0% |
| !!! | TAGTAATATACACAAGTTTT+AGG | - | chr3_4:68353944-68353963 | Msa0516810:intron | 20.0% |
| !! | AACAAATATGCAAAAGAAAT+AGG | + | chr3_4:68353979-68353998 | None:intergenic | 20.0% |
| !!! | TTTAATGGATAATTATGTAC+CGG | - | chr3_4:68354148-68354167 | Msa0516810:intron | 20.0% |
| !!! | TTTATTGGTTTTTATCAGTT+TGG | - | chr3_4:68354177-68354196 | Msa0516810:intron | 20.0% |
| ! | AAATTTGATCTCATTTCCAT+CGG | - | chr3_4:68349453-68349472 | Msa0516810:three_prime_UTR | 25.0% |
| !!! | TTTTTTTACAATTCGCAACT+TGG | - | chr3_4:68349493-68349512 | Msa0516810:intron | 25.0% |
| !!! | TTTTTTACAATTCGCAACTT+GGG | - | chr3_4:68349494-68349513 | Msa0516810:intron | 25.0% |
| ! | TGAAAGATAATCTCCAATTT+AGG | - | chr3_4:68349625-68349644 | Msa0516810:three_prime_UTR | 25.0% |
| ! | GATTTGTGAATTGTATACAT+GGG | - | chr3_4:68349728-68349747 | Msa0516810:exon | 25.0% |
| ! | GTGTGTATAAAATCAATAAG+GGG | - | chr3_4:68349825-68349844 | Msa0516810:intron | 25.0% |
| ! | ATTGATTAAACTAGCACTAA+TGG | + | chr3_4:68349926-68349945 | None:intergenic | 25.0% |
| ! | TGATTATAGTTAGATGTTTC+AGG | - | chr3_4:68350391-68350410 | Msa0516810:intron | 25.0% |
| ! | CAGTTCTTCTACAAAAAAAA+TGG | + | chr3_4:68350466-68350485 | None:intergenic | 25.0% |
| !!! | TTTTCTTGTTTTCCATGTTA+TGG | - | chr3_4:68350608-68350627 | Msa0516810:intron | 25.0% |
| !!! | TGTGTTTTGTTCAATTTGTT+TGG | - | chr3_4:68350652-68350671 | Msa0516810:intron | 25.0% |
| ! | TGATAACAGTTAATGAGAAA+AGG | - | chr3_4:68350858-68350877 | Msa0516810:CDS | 25.0% |
| ! | TTATCTTATATGTAGCTTCA+AGG | - | chr3_4:68351068-68351087 | Msa0516810:intron | 25.0% |
| ! | TATCTTATATGTAGCTTCAA+GGG | - | chr3_4:68351069-68351088 | Msa0516810:intron | 25.0% |
| ! | TCAATTCAATTTCCATTATG+CGG | + | chr3_4:68351172-68351191 | None:intergenic | 25.0% |
| !! | CATAATGGAAATTGAATTGA+AGG | - | chr3_4:68351172-68351191 | Msa0516810:intron | 25.0% |
| ! | TAATCTAGTAGTGAGAAAAA+GGG | + | chr3_4:68351281-68351300 | None:intergenic | 25.0% |
| !! | CTACTAGATTACTTGTATTT+TGG | - | chr3_4:68351290-68351309 | Msa0516810:intron | 25.0% |
| ! | AAAAAGATACATATGCTGAA+TGG | - | chr3_4:68351648-68351667 | Msa0516810:intron | 25.0% |
| !!! | GCAATTCCATGTTTTTTATT+TGG | + | chr3_4:68351684-68351703 | None:intergenic | 25.0% |
| ! | CTTCAATAATTATTGCTGAT+TGG | + | chr3_4:68351966-68351985 | None:intergenic | 25.0% |
| !!! | TCACCTACAGTTTTAATATT+TGG | - | chr3_4:68352166-68352185 | Msa0516810:intron | 25.0% |
| !!! | CAGTTTTAATATTTGGTTTC+AGG | - | chr3_4:68352173-68352192 | Msa0516810:intron | 25.0% |
| ! | GCACAAAAATATAATGCAAA+AGG | + | chr3_4:68352686-68352705 | None:intergenic | 25.0% |
| ! | CATAATTAGTGTAATCAACA+AGG | + | chr3_4:68352769-68352788 | None:intergenic | 25.0% |
| ! | TTATTCATTTATTGTCTGAG+AGG | - | chr3_4:68352990-68353009 | Msa0516810:intron | 25.0% |
| ! | TATTCATTTATTGTCTGAGA+GGG | - | chr3_4:68352991-68353010 | Msa0516810:intron | 25.0% |
| ! | GTCTAATAACTTTATATACC+TGG | + | chr3_4:68353523-68353542 | None:intergenic | 25.0% |
| ! | ACAATTCAAGTGCATAAAAA+TGG | + | chr3_4:68353577-68353596 | None:intergenic | 25.0% |
| ! | TGAATTGTTTATCCAATTAC+AGG | - | chr3_4:68353589-68353608 | Msa0516810:five_prime_UTR | 25.0% |
| !!! | TATAATCAGCTTTAAATACC+TGG | + | chr3_4:68353656-68353675 | None:intergenic | 25.0% |
| !! | GGTATTTAAAGCTGATTATA+TGG | - | chr3_4:68353656-68353675 | Msa0516810:five_prime_UTR | 25.0% |
| !!! | TATGGTTCAGAATTTTAATG+AGG | - | chr3_4:68353674-68353693 | Msa0516810:five_prime_UTR | 25.0% |
| ! | TTCCTACTTTCTGTTAATAT+TGG | + | chr3_4:68353827-68353846 | None:intergenic | 25.0% |
| !! | AGTAGGAACAATTGAAATTT+TGG | - | chr3_4:68353839-68353858 | Msa0516810:intron | 25.0% |
| ! | TGTTCCGGTAAAAAAAAATA+AGG | + | chr3_4:68353921-68353940 | None:intergenic | 25.0% |
| ! | AAAAAAATCCATGCTTCATT+AGG | + | chr3_4:68354023-68354042 | None:intergenic | 25.0% |
| ! | AAAAACCAATAAAACAACTC+CGG | + | chr3_4:68354170-68354189 | None:intergenic | 25.0% |
| ! | TGTCTATTAAACATGAATGT+TGG | - | chr3_4:68354255-68354274 | Msa0516810:five_prime_UTR | 25.0% |
| ! | CAAATGCTAATGGTATTTAT+AGG | + | chr3_4:68354318-68354337 | None:intergenic | 25.0% |
| ! | CTATAAATACCATTAGCATT+TGG | - | chr3_4:68354316-68354335 | Msa0516810:five_prime_UTR | 25.0% |
| !! | AATGTTCCCGTTTTGAATTA+GGG | - | chr3_4:68349421-68349440 | Msa0516810:three_prime_UTR | 30.0% |
| TCAAAACCCTAATTCAAAAC+GGG | + | chr3_4:68349430-68349449 | None:intergenic | 30.0% | |
| CTCAAAACCCTAATTCAAAA+CGG | + | chr3_4:68349431-68349450 | None:intergenic | 30.0% | |
| GGATTTGTGAATTGTATACA+TGG | - | chr3_4:68349727-68349746 | Msa0516810:exon | 30.0% | |
| ATAAAAAAGGGGGTAATGTT+AGG | - | chr3_4:68349944-68349963 | Msa0516810:intron | 30.0% | |
| TAAAAAAGGGGGTAATGTTA+GGG | - | chr3_4:68349945-68349964 | Msa0516810:intron | 30.0% | |
| AAACATAGGGAATATAGAGT+GGG | - | chr3_4:68350107-68350126 | Msa0516810:intron | 30.0% | |
| !! | GATTATGCTTGCTAATTTTC+TGG | - | chr3_4:68350200-68350219 | Msa0516810:intron | 30.0% |
| !! | TAGTTAGATGTTTCAGGTTT+AGG | - | chr3_4:68350397-68350416 | Msa0516810:intron | 30.0% |
| TTCTGATTCTCTTATATCAG+CGG | + | chr3_4:68350552-68350571 | None:intergenic | 30.0% | |
| AATTGAAGATCTGTTCTACA+AGG | - | chr3_4:68350571-68350590 | Msa0516810:intron | 30.0% | |
| CATGGAAAACAAGAAAAGTA+CGG | + | chr3_4:68350605-68350624 | None:intergenic | 30.0% | |
| TACTATATCTTCCTATTGTC+TGG | - | chr3_4:68350676-68350695 | Msa0516810:intron | 30.0% | |
| AAATAGAGAAGTAGAAATGC+AGG | + | chr3_4:68350758-68350777 | None:intergenic | 30.0% | |
| !!! | GTTTACTGGCTTTTACTAAT+CGG | + | chr3_4:68350823-68350842 | None:intergenic | 30.0% |
| CTGAATTCAATCATGTTTAC+TGG | + | chr3_4:68350837-68350856 | None:intergenic | 30.0% | |
| ! | CAGTTAATGAGAAAAGGTTT+TGG | - | chr3_4:68350864-68350883 | Msa0516810:CDS | 30.0% |
| AGGTCAACAGAAAAAATACA+TGG | + | chr3_4:68350962-68350981 | None:intergenic | 30.0% | |
| !! | TTTGCTTAGCTTTGTTATCT+TGG | - | chr3_4:68351006-68351025 | Msa0516810:CDS | 30.0% |
| !! | TAGCTTTGTTATCTTGGATT+TGG | - | chr3_4:68351012-68351031 | Msa0516810:CDS | 30.0% |
| CAACAAAACAATAACATGGA+GGG | + | chr3_4:68351208-68351227 | None:intergenic | 30.0% | |
| TCAACAAAACAATAACATGG+AGG | + | chr3_4:68351209-68351228 | None:intergenic | 30.0% | |
| !! | TCCATGTTATTGTTTTGTTG+AGG | - | chr3_4:68351208-68351227 | Msa0516810:intron | 30.0% |
| ACCTCAACAAAACAATAACA+TGG | + | chr3_4:68351212-68351231 | None:intergenic | 30.0% | |
| GTAATCTAGTAGTGAGAAAA+AGG | + | chr3_4:68351282-68351301 | None:intergenic | 30.0% | |
| !!! | AGATTACTTGTATTTTGGCT+TGG | - | chr3_4:68351295-68351314 | Msa0516810:intron | 30.0% |
| !!! | GTTCCAACTTTTATTTTCTG+AGG | - | chr3_4:68351406-68351425 | Msa0516810:intron | 30.0% |
| TCACCTCAGAAAATAAAAGT+TGG | + | chr3_4:68351412-68351431 | None:intergenic | 30.0% | |
| AAACATGAAGATAAGAGTCA+TGG | + | chr3_4:68351837-68351856 | None:intergenic | 30.0% | |
| TTTACTACAGTTATTGTTCG+TGG | - | chr3_4:68352050-68352069 | Msa0516810:intron | 30.0% | |
| AATTGTGATTTCCATTTGAG+GGG | + | chr3_4:68352443-68352462 | None:intergenic | 30.0% | |
| CAATTGTGATTTCCATTTGA+GGG | + | chr3_4:68352444-68352463 | None:intergenic | 30.0% | |
| TCAATTGTGATTTCCATTTG+AGG | + | chr3_4:68352445-68352464 | None:intergenic | 30.0% | |
| CTGAAACAATTGAGAAGAAA+AGG | + | chr3_4:68352567-68352586 | None:intergenic | 30.0% | |
| !!! | CAAGCTCTCATTTTAGTTTA+GGG | - | chr3_4:68352589-68352608 | Msa0516810:CDS | 30.0% |
| ! | ATGGCTAACTTTCTATTTTC+TGG | - | chr3_4:68352652-68352671 | Msa0516810:intron | 30.0% |
| !!! | CTTTCTATTTTCTGGAGTAT+TGG | - | chr3_4:68352660-68352679 | Msa0516810:intron | 30.0% |
| ! | TTATACGATATTCGTTTTGC+TGG | - | chr3_4:68352840-68352859 | Msa0516810:intron | 30.0% |
| AACAAAGACACGACAAATAA+GGG | + | chr3_4:68353125-68353144 | None:intergenic | 30.0% | |
| AAACAAAGACACGACAAATA+AGG | + | chr3_4:68353126-68353145 | None:intergenic | 30.0% | |
| ATTTCACTGTTTGTATGAGA+AGG | - | chr3_4:68353199-68353218 | Msa0516810:intron | 30.0% | |
| TTTGTATGAGAAGGATTATC+TGG | - | chr3_4:68353208-68353227 | Msa0516810:CDS | 30.0% | |
| ! | GTATTGTGACTTTCTGATTT+TGG | - | chr3_4:68353345-68353364 | Msa0516810:intron | 30.0% |
| AATAACTTTATATACCTGGC+AGG | + | chr3_4:68353519-68353538 | None:intergenic | 30.0% | |
| ATTCAAGTGCATAAAAATGG+TGG | + | chr3_4:68353574-68353593 | None:intergenic | 30.0% | |
| AGCCAATATTAACAGAAAGT+AGG | - | chr3_4:68353822-68353841 | Msa0516810:intron | 30.0% | |
| TACAAAGCAGTTATTAAGTG+AGG | - | chr3_4:68353868-68353887 | Msa0516810:intron | 30.0% | |
| TGTATATTACTACTCTGTTC+CGG | + | chr3_4:68353936-68353955 | None:intergenic | 30.0% | |
| !!! | AAGCATGGATTTTTTTTTGC+AGG | - | chr3_4:68354027-68354046 | Msa0516810:intron | 30.0% |
| AAAATGTCTCCAAATGCTAA+TGG | + | chr3_4:68354328-68354347 | None:intergenic | 30.0% | |
| AAATAAGCGTTTGTTTAGAG+TGG | - | chr3_4:68354366-68354385 | Msa0516810:five_prime_UTR | 30.0% | |
| AAGAACAGTCTAATAAAGCA+GGG | + | chr3_4:68354420-68354439 | None:intergenic | 30.0% | |
| ATGGCTTGATTGTGAAAAAA+AGG | - | chr3_4:68354496-68354515 | Msa0516810:five_prime_UTR | 30.0% | |
| !! | GAATGTTCCCGTTTTGAATT+AGG | - | chr3_4:68349420-68349439 | Msa0516810:three_prime_UTR | 35.0% |
| !! | CGTTTTGAATTAGGGTTTTG+AGG | - | chr3_4:68349429-68349448 | Msa0516810:three_prime_UTR | 35.0% |
| AATCTCCAATTTAGGTGACT+TGG | - | chr3_4:68349633-68349652 | Msa0516810:three_prime_UTR | 35.0% | |
| !! | TGACTTGGTTGTGTATTTCA+CGG | - | chr3_4:68349648-68349667 | Msa0516810:three_prime_UTR | 35.0% |
| !! | AAGGGTAATGGTTCTAGTTA+AGG | - | chr3_4:68349706-68349725 | Msa0516810:three_prime_UTR | 35.0% |
| TAATTCAGATTGTGAGGTGA+GGG | - | chr3_4:68349751-68349770 | Msa0516810:intron | 35.0% | |
| !! | TAGGGTTTGATTTGTCAAAG+CGG | - | chr3_4:68349963-68349982 | Msa0516810:intron | 35.0% |
| ! | TGAGCTTTGCTATCAAACAT+AGG | - | chr3_4:68350093-68350112 | Msa0516810:intron | 35.0% |
| ! | GAGCTTTGCTATCAAACATA+GGG | - | chr3_4:68350094-68350113 | Msa0516810:intron | 35.0% |
| CAAACATAGGGAATATAGAG+TGG | - | chr3_4:68350106-68350125 | Msa0516810:intron | 35.0% | |
| !! | TGCTTGCTAATTTTCTGGAA+AGG | - | chr3_4:68350205-68350224 | Msa0516810:intron | 35.0% |
| !! | CTAATTTTCTGGAAAGGATG+AGG | - | chr3_4:68350211-68350230 | Msa0516810:intron | 35.0% |
| !! | TTATAGCTTTGGAGCATCTT+TGG | - | chr3_4:68350258-68350277 | Msa0516810:intron | 35.0% |
| !!! | CTTGGTTTGCTTCATAGTTT+TGG | - | chr3_4:68350329-68350348 | Msa0516810:CDS | 35.0% |
| ! | TTTTCTCGCACAATCTATGT+TGG | - | chr3_4:68350518-68350537 | Msa0516810:intron | 35.0% |
| TCTGATTCTCTTATATCAGC+GGG | + | chr3_4:68350551-68350570 | None:intergenic | 35.0% | |
| ATTCAGTTCAAAACTCCCAA+TGG | + | chr3_4:68350716-68350735 | None:intergenic | 35.0% | |
| CAGAAAAAATACATGGCTGT+GGG | + | chr3_4:68350955-68350974 | None:intergenic | 35.0% | |
| ACAGAAAAAATACATGGCTG+TGG | + | chr3_4:68350956-68350975 | None:intergenic | 35.0% | |
| TACAGACCATTCAAAGGAAA+AGG | + | chr3_4:68350985-68351004 | None:intergenic | 35.0% | |
| CCATACTGTTAAGAGGATAA+TGG | + | chr3_4:68351149-68351168 | None:intergenic | 35.0% | |
| CCATTATCCTCTTAACAGTA+TGG | - | chr3_4:68351146-68351165 | Msa0516810:intron | 35.0% | |
| TCTCTTCTATACTTCTGTCT+TGG | - | chr3_4:68351243-68351262 | Msa0516810:intron | 35.0% | |
| ! | ACTTTGATGGTTGTCGATTA+AGG | - | chr3_4:68351373-68351392 | Msa0516810:intron | 35.0% |
| ! | CTTTGATGGTTGTCGATTAA+GGG | - | chr3_4:68351374-68351393 | Msa0516810:intron | 35.0% |
| ! | TCTGAGGTGAAAACTTTCTT+CGG | - | chr3_4:68351422-68351441 | Msa0516810:intron | 35.0% |
| GATATTAGTCGGAGCTTAAT+GGG | + | chr3_4:68351734-68351753 | None:intergenic | 35.0% | |
| TGATATTAGTCGGAGCTTAA+TGG | + | chr3_4:68351735-68351754 | None:intergenic | 35.0% | |
| AAGATAAGAGTCATGGACAA+TGG | + | chr3_4:68351830-68351849 | None:intergenic | 35.0% | |
| !! | GTGAAGGTACACATTCATTT+TGG | - | chr3_4:68352247-68352266 | Msa0516810:CDS | 35.0% |
| ! | TATTTTCTGCTCCATATGAG+TGG | - | chr3_4:68352342-68352361 | Msa0516810:intron | 35.0% |
| AGTTATTTACGCCACTCATA+TGG | + | chr3_4:68352356-68352375 | None:intergenic | 35.0% | |
| TATGAGTGGCGTAAATAACT+TGG | - | chr3_4:68352356-68352375 | Msa0516810:intron | 35.0% | |
| ATGAGTGGCGTAAATAACTT+GGG | - | chr3_4:68352357-68352376 | Msa0516810:intron | 35.0% | |
| ATGTCTACTAACATGGTCAT+TGG | + | chr3_4:68352521-68352540 | None:intergenic | 35.0% | |
| !!! | GCAAGCTCTCATTTTAGTTT+AGG | - | chr3_4:68352588-68352607 | Msa0516810:CDS | 35.0% |
| !!! | ATACTGCTCTTTTTTGCTCA+GGG | - | chr3_4:68352735-68352754 | Msa0516810:intron | 35.0% |
| ! | TTTTTCACAGATTCGGAAAC+TGG | - | chr3_4:68352892-68352911 | Msa0516810:intron | 35.0% |
| GCAAAAGTTTGTAAGATCTG+CGG | + | chr3_4:68353084-68353103 | None:intergenic | 35.0% | |
| TTCATTCTGCAGTAGATCTT+TGG | - | chr3_4:68353428-68353447 | Msa0516810:intron | 35.0% | |
| CGAAGGTAAATGTCAAATAC+AGG | + | chr3_4:68353782-68353801 | None:intergenic | 35.0% | |
| AAGTGAAAACATGATTGCGA+AGG | + | chr3_4:68353799-68353818 | None:intergenic | 35.0% | |
| ATTAAGTGAGGATGAACATC+TGG | - | chr3_4:68353880-68353899 | Msa0516810:intron | 35.0% | |
| TTAAGTGAGGATGAACATCT+GGG | - | chr3_4:68353881-68353900 | Msa0516810:intron | 35.0% | |
| !!! | TTTTTTTTGCAGGTTCTGTC+TGG | - | chr3_4:68354037-68354056 | Msa0516810:intron | 35.0% |
| TAAAGCTCCTGCATTATTCT+GGG | - | chr3_4:68354092-68354111 | Msa0516810:intron | 35.0% | |
| !! | ATGTACCGGAGTTGTTTTAT+TGG | - | chr3_4:68354162-68354181 | Msa0516810:intron | 35.0% |
| TATCAGTTTGGTTACTCTGT+AGG | - | chr3_4:68354189-68354208 | Msa0516810:intron | 35.0% | |
| ATCAGTTTGGTTACTCTGTA+GGG | - | chr3_4:68354190-68354209 | Msa0516810:intron | 35.0% | |
| ATAGACAGAGAAGACCAAAA+TGG | + | chr3_4:68354242-68354261 | None:intergenic | 35.0% | |
| ATGAATGTTGGATATTTGCC+TGG | - | chr3_4:68354267-68354286 | Msa0516810:five_prime_UTR | 35.0% | |
| ! | CTATTGTCCTTTTCAACACA+AGG | - | chr3_4:68354290-68354309 | Msa0516810:five_prime_UTR | 35.0% |
| ATAGGTACCTTGTGTTGAAA+AGG | + | chr3_4:68354300-68354319 | None:intergenic | 35.0% | |
| CAAGAACAGTCTAATAAAGC+AGG | + | chr3_4:68354421-68354440 | None:intergenic | 35.0% | |
| TGCTCAAGCTGTAATCTTTC+TGG | - | chr3_4:68349330-68349349 | Msa0516810:three_prime_UTR | 40.0% | |
| GAAGGGGATGATTCTATGTA+CGG | + | chr3_4:68349360-68349379 | None:intergenic | 40.0% | |
| CACAACCAAGTCACCTAAAT+TGG | + | chr3_4:68349641-68349660 | None:intergenic | 40.0% | |
| ! | GACTTGGTTGTGTATTTCAC+GGG | - | chr3_4:68349649-68349668 | Msa0516810:three_prime_UTR | 40.0% |
| AGAAGCTGGTAAAAGGGTAA+TGG | - | chr3_4:68349694-68349713 | Msa0516810:three_prime_UTR | 40.0% | |
| CATGGGTAATTCAGATTGTG+AGG | - | chr3_4:68349745-68349764 | Msa0516810:intron | 40.0% | |
| GTAATTCAGATTGTGAGGTG+AGG | - | chr3_4:68349750-68349769 | Msa0516810:intron | 40.0% | |
| TGTAGTACCAGTACTTGTCT+CGG | - | chr3_4:68349782-68349801 | Msa0516810:intron | 40.0% | |
| TTATTGTCCGAGACAAGTAC+TGG | + | chr3_4:68349792-68349811 | None:intergenic | 40.0% | |
| AGGGGTAATGTTTACACTTG+AGG | - | chr3_4:68349843-68349862 | Msa0516810:intron | 40.0% | |
| !! | AGCTTAGCCTTGTTACCAAT+GGG | - | chr3_4:68349884-68349903 | Msa0516810:intron | 40.0% |
| GGTTAAAAGAGAGATGCGTA+AGG | - | chr3_4:68349984-68350003 | Msa0516810:intron | 40.0% | |
| TATGATAGATGACAAGCGCT+TGG | - | chr3_4:68350063-68350082 | Msa0516810:intron | 40.0% | |
| !! | TCTTTGGAGCAAATGAGCAA+TGG | - | chr3_4:68350274-68350293 | Msa0516810:intron | 40.0% |
| !! | AGATGTTTCAGGTTTAGGTG+CGG | - | chr3_4:68350402-68350421 | Msa0516810:intron | 40.0% |
| !! | GAACTGAAAGCACCATAACA+TGG | + | chr3_4:68350623-68350642 | None:intergenic | 40.0% |
| CAAAACTCCCAATGGTGTAA+AGG | + | chr3_4:68350708-68350727 | None:intergenic | 40.0% | |
| ! | TGACCTCCTTTTCCTTTGAA+TGG | - | chr3_4:68350976-68350995 | Msa0516810:intron | 40.0% |
| AGACCATTCAAAGGAAAAGG+AGG | + | chr3_4:68350982-68351001 | None:intergenic | 40.0% | |
| GCAAACTACAGACCATTCAA+AGG | + | chr3_4:68350991-68351010 | None:intergenic | 40.0% | |
| CAAGCGACAGCTATAACTAA+GGG | + | chr3_4:68351044-68351063 | None:intergenic | 40.0% | |
| TCAAGCGACAGCTATAACTA+AGG | + | chr3_4:68351045-68351064 | None:intergenic | 40.0% | |
| CTAACGCAGTCATGTTTCAA+TGG | - | chr3_4:68351119-68351138 | Msa0516810:intron | 40.0% | |
| TTAACAGTATGGCCGCATAA+TGG | - | chr3_4:68351157-68351176 | Msa0516810:intron | 40.0% | |
| GAGATGCTGAAGATGCAATT+CGG | - | chr3_4:68351334-68351353 | Msa0516810:intron | 40.0% | |
| AGATGCTGAAGATGCAATTC+GGG | - | chr3_4:68351335-68351354 | Msa0516810:intron | 40.0% | |
| CGTGATGGTTACAACTTTGA+TGG | - | chr3_4:68351360-68351379 | Msa0516810:intron | 40.0% | |
| ! | ATGGTTGTCGATTAAGGGTA+TGG | - | chr3_4:68351379-68351398 | Msa0516810:intron | 40.0% |
| ! | TGGTTGTCGATTAAGGGTAT+GGG | - | chr3_4:68351380-68351399 | Msa0516810:intron | 40.0% |
| ACCTACAACAAGAGCAGATT+AGG | + | chr3_4:68351452-68351471 | None:intergenic | 40.0% | |
| ! | TAATCTGCTCTTGTTGTAGG+TGG | - | chr3_4:68351451-68351470 | Msa0516810:intron | 40.0% |
| AATGGCGAGAGATACCAAAA+CGG | + | chr3_4:68351583-68351602 | None:intergenic | 40.0% | |
| ACACACCTCGAAATTCAGAA+TGG | + | chr3_4:68351601-68351620 | None:intergenic | 40.0% | |
| ATTTCGAGGTGTGTCTATTC+AGG | - | chr3_4:68351607-68351626 | Msa0516810:intron | 40.0% | |
| TTTCGAGGTGTGTCTATTCA+GGG | - | chr3_4:68351608-68351627 | Msa0516810:intron | 40.0% | |
| AATGTGTACCTTCACTGTCA+CGG | + | chr3_4:68352242-68352261 | None:intergenic | 40.0% | |
| ACAAGCGATGTCTACTAACA+TGG | + | chr3_4:68352528-68352547 | None:intergenic | 40.0% | |
| TAGTTTAGGGACTAAGTCTG+TGG | - | chr3_4:68352602-68352621 | Msa0516810:CDS | 40.0% | |
| AGTTTAGGGACTAAGTCTGT+GGG | - | chr3_4:68352603-68352622 | Msa0516810:CDS | 40.0% | |
| GCAAAAAAGAGCAGTATGAG+TGG | + | chr3_4:68352732-68352751 | None:intergenic | 40.0% | |
| !!! | CATACTGCTCTTTTTTGCTC+AGG | - | chr3_4:68352734-68352753 | Msa0516810:intron | 40.0% |
| !!! | CTTTTTTGCTCAGGGACTTT+TGG | - | chr3_4:68352743-68352762 | Msa0516810:intron | 40.0% |
| ! | ACGATATTCGTTTTGCTGGA+AGG | - | chr3_4:68352844-68352863 | Msa0516810:intron | 40.0% |
| ! | CGATATTCGTTTTGCTGGAA+GGG | - | chr3_4:68352845-68352864 | Msa0516810:intron | 40.0% |
| ACACCGAGTTTAGAAATCCT+TGG | - | chr3_4:68352918-68352937 | Msa0516810:intron | 40.0% | |
| CACCGAGTTTAGAAATCCTT+GGG | - | chr3_4:68352919-68352938 | Msa0516810:intron | 40.0% | |
| CTTGGGCGAGATCATATATT+CGG | - | chr3_4:68352936-68352955 | Msa0516810:intron | 40.0% | |
| TTGGGCGAGATCATATATTC+GGG | - | chr3_4:68352937-68352956 | Msa0516810:intron | 40.0% | |
| ! | TGTCACTTGATGTTTGAGTG+CGG | - | chr3_4:68353172-68353191 | Msa0516810:intron | 40.0% |
| CAGAAAGTCACAATACCTTC+TGG | + | chr3_4:68353341-68353360 | None:intergenic | 40.0% | |
| ATGTTCGTCCTAATGAAGCA+TGG | - | chr3_4:68354012-68354031 | Msa0516810:intron | 40.0% | |
| CTAAAGCTCCTGCATTATTC+TGG | - | chr3_4:68354091-68354110 | Msa0516810:intron | 40.0% | |
| CCAATATCCCAGAATAATGC+AGG | + | chr3_4:68354102-68354121 | None:intergenic | 40.0% | |
| !! | CCTGCATTATTCTGGGATAT+TGG | - | chr3_4:68354099-68354118 | Msa0516810:intron | 40.0% |
| !!! | TAGACTTGCTGCTACCATTT+TGG | - | chr3_4:68354225-68354244 | Msa0516810:five_prime_UTR | 40.0% |
| TGTTGAAAAGGACAATAGCC+AGG | + | chr3_4:68354288-68354307 | None:intergenic | 40.0% | |
| ! | AAGCGTTTGTTTAGAGTGGT+TGG | - | chr3_4:68354370-68354389 | Msa0516810:five_prime_UTR | 40.0% |
| TACTCTTGATGCTGTTCTCA+TGG | - | chr3_4:68354477-68354496 | Msa0516810:five_prime_UTR | 40.0% | |
| ACTTCAGTTTCGCTGCGATT+GGG | - | chr3_4:68349307-68349326 | Msa0516810:three_prime_UTR | 45.0% | |
| AATAGCAAACAACGTGGGTC+AGG | + | chr3_4:68349525-68349544 | None:intergenic | 45.0% | |
| !! | TGACCCACGTTGTTTGCTAT+TGG | - | chr3_4:68349524-68349543 | Msa0516810:three_prime_UTR | 45.0% |
| !! | GACCCACGTTGTTTGCTATT+GGG | - | chr3_4:68349525-68349544 | Msa0516810:three_prime_UTR | 45.0% |
| CACCCAATAGCAAACAACGT+GGG | + | chr3_4:68349530-68349549 | None:intergenic | 45.0% | |
| AGGTCGAAGAAGCTGGTAAA+AGG | - | chr3_4:68349687-68349706 | Msa0516810:three_prime_UTR | 45.0% | |
| GGTCGAAGAAGCTGGTAAAA+GGG | - | chr3_4:68349688-68349707 | Msa0516810:three_prime_UTR | 45.0% | |
| !! | GAGCTTAGCCTTGTTACCAA+TGG | - | chr3_4:68349883-68349902 | Msa0516810:intron | 45.0% |
| !! | GCTTAGCCTTGTTACCAATG+GGG | - | chr3_4:68349885-68349904 | Msa0516810:intron | 45.0% |
| CATATTACAACCGTCCCCAT+TGG | + | chr3_4:68349902-68349921 | None:intergenic | 45.0% | |
| CAATGGGGACGGTTGTAATA+TGG | - | chr3_4:68349900-68349919 | Msa0516810:intron | 45.0% | |
| TAGGGAATATAGAGTGGGAG+TGG | - | chr3_4:68350112-68350131 | Msa0516810:intron | 45.0% | |
| AGGGAATATAGAGTGGGAGT+GGG | - | chr3_4:68350113-68350132 | Msa0516810:intron | 45.0% | |
| GATTCTTCCTCACTCTCAGA+AGG | - | chr3_4:68350178-68350197 | Msa0516810:intron | 45.0% | |
| ! | GCATAATCCTTCTGAGAGTG+AGG | + | chr3_4:68350188-68350207 | None:intergenic | 45.0% |
| CTCTTCAAGGATTGCTCTCT+TGG | - | chr3_4:68350311-68350330 | Msa0516810:CDS | 45.0% | |
| ATTCTCTTATATCAGCGGGC+AGG | + | chr3_4:68350547-68350566 | None:intergenic | 45.0% | |
| ! | AAAGGTGGGTTCCAGACAAT+AGG | + | chr3_4:68350690-68350709 | None:intergenic | 45.0% |
| GAACCCACCTTTACACCATT+GGG | - | chr3_4:68350698-68350717 | Msa0516810:intron | 45.0% | |
| ACTCCCAATGGTGTAAAGGT+GGG | + | chr3_4:68350704-68350723 | None:intergenic | 45.0% | |
| AACTCCCAATGGTGTAAAGG+TGG | + | chr3_4:68350705-68350724 | None:intergenic | 45.0% | |
| TAGCTTCAAGGGTCAATGTG+TGG | - | chr3_4:68351080-68351099 | Msa0516810:intron | 45.0% | |
| AGCTTCAAGGGTCAATGTGT+GGG | - | chr3_4:68351081-68351100 | Msa0516810:intron | 45.0% | |
| TATGCGGCCATACTGTTAAG+AGG | + | chr3_4:68351156-68351175 | None:intergenic | 45.0% | |
| AAACAATAACATGGAGGGCG+AGG | + | chr3_4:68351203-68351222 | None:intergenic | 45.0% | |
| GATGCTGAAGATGCAATTCG+GGG | - | chr3_4:68351336-68351355 | Msa0516810:intron | 45.0% | |
| ! | GCCTAATCTGCTCTTGTTGT+AGG | - | chr3_4:68351448-68351467 | Msa0516810:intron | 45.0% |
| CATCATCAAGTGACAGACGT+GGG | - | chr3_4:68351498-68351517 | Msa0516810:intron | 45.0% | |
| TCTCGCCATTCTGAATTTCG+AGG | - | chr3_4:68351593-68351612 | Msa0516810:intron | 45.0% | |
| TGATACCTTCAAATCCTGCC+AGG | + | chr3_4:68352093-68352112 | None:intergenic | 45.0% | |
| CAGGATCATATGCGAAAAGC+TGG | - | chr3_4:68352192-68352211 | Msa0516810:CDS | 45.0% | |
| ATGTGTACCTTCACTGTCAC+GGG | + | chr3_4:68352241-68352260 | None:intergenic | 45.0% | |
| GTTTAGGGACTAAGTCTGTG+GGG | - | chr3_4:68352604-68352623 | Msa0516810:CDS | 45.0% | |
| ! | AATAACCCTGTGGTGTCAGA+TGG | - | chr3_4:68352633-68352652 | Msa0516810:intron | 45.0% |
| CGCCCAAGGATTTCTAAACT+CGG | + | chr3_4:68352924-68352943 | None:intergenic | 45.0% | |
| CGAATATATGATCTCGCCCA+AGG | + | chr3_4:68352938-68352957 | None:intergenic | 45.0% | |
| GTCACTTGATGTTTGAGTGC+GGG | - | chr3_4:68353173-68353192 | Msa0516810:intron | 45.0% | |
| AGTATGAGAGCAGTCGTTCA+AGG | - | chr3_4:68353272-68353291 | Msa0516810:CDS | 45.0% | |
| ! | CAATACCTTCTGGCCCTTTT+CGG | + | chr3_4:68353331-68353350 | None:intergenic | 45.0% |
| !! | CTTGATTGGTGATGCTGATC+TGG | + | chr3_4:68353496-68353515 | None:intergenic | 45.0% |
| ATATACCTGGCAGGCTTGAT+TGG | + | chr3_4:68353510-68353529 | None:intergenic | 45.0% | |
| TGGTGATCTTGGCCTGTAAT+TGG | + | chr3_4:68353604-68353623 | None:intergenic | 45.0% | |
| !! | TCAGCTTTAAATACCTGGCG+TGG | + | chr3_4:68353651-68353670 | None:intergenic | 45.0% |
| !! | ATAAATTGAATTAAAATTTA+AGG | + | chr3_4:68349384-68349403 | None:intergenic | 5.0% |
| !!! | TTTAATATATATTGATTTAA+CGG | + | chr3_4:68353751-68353770 | None:intergenic | 5.0% |
| AGCGAAACTGAAGTCGAAGC+TGG | + | chr3_4:68349301-68349320 | None:intergenic | 50.0% | |
| GACTTCAGTTTCGCTGCGAT+TGG | - | chr3_4:68349306-68349325 | Msa0516810:three_prime_UTR | 50.0% | |
| TCAAACTTGGAGCTCACCGA+TGG | + | chr3_4:68349472-68349491 | None:intergenic | 50.0% | |
| GCACCCAATAGCAAACAACG+TGG | + | chr3_4:68349531-68349550 | None:intergenic | 50.0% | |
| ACGGGTGAAATCTGCATACG+AGG | - | chr3_4:68349667-68349686 | Msa0516810:three_prime_UTR | 50.0% | |
| !! | AGCCTTGTTACCAATGGGGA+CGG | - | chr3_4:68349889-68349908 | Msa0516810:intron | 50.0% |
| ! | AACCGTCCCCATTGGTAACA+AGG | + | chr3_4:68349894-68349913 | None:intergenic | 50.0% |
| TAGAGTGGGAGTGGGAGAAT+CGG | - | chr3_4:68350121-68350140 | Msa0516810:intron | 50.0% | |
| GGAGCAAATGAGCAATGGAG+TGG | - | chr3_4:68350279-68350298 | Msa0516810:CDS | 50.0% | |
| ATGAGCAATGGAGTGGAGCA+CGG | - | chr3_4:68350286-68350305 | Msa0516810:CDS | 50.0% | |
| GGAACCCACCTTTACACCAT+TGG | - | chr3_4:68350697-68350716 | Msa0516810:intron | 50.0% | |
| GCTTCAAGGGTCAATGTGTG+GGG | - | chr3_4:68351082-68351101 | Msa0516810:intron | 50.0% | |
| ! | CCACGTCTGTCACTTGATGA+TGG | + | chr3_4:68351500-68351519 | None:intergenic | 50.0% |
| CCATCATCAAGTGACAGACG+TGG | - | chr3_4:68351497-68351516 | Msa0516810:intron | 50.0% | |
| TCAAGTGACAGACGTGGGTA+TGG | - | chr3_4:68351503-68351522 | Msa0516810:intron | 50.0% | |
| TGCATCCTGGCAGGATTTGA+AGG | - | chr3_4:68352085-68352104 | Msa0516810:intron | 50.0% | |
| GAAGTTTCCCGTGACAGTGA+AGG | - | chr3_4:68352231-68352250 | Msa0516810:CDS | 50.0% | |
| AACATGATCAGCCCCACAAC+TGG | - | chr3_4:68352477-68352496 | Msa0516810:intron | 50.0% | |
| ATGCCAGACTGACCAGTTGT+GGG | + | chr3_4:68352492-68352511 | None:intergenic | 50.0% | |
| AATGCCAGACTGACCAGTTG+TGG | + | chr3_4:68352493-68352512 | None:intergenic | 50.0% | |
| ACAACTGGTCAGTCTGGCAT+TGG | - | chr3_4:68352492-68352511 | Msa0516810:intron | 50.0% | |
| CTGACACCACAGGGTTATTC+TGG | + | chr3_4:68352632-68352651 | None:intergenic | 50.0% | |
| GTTAGCCATCTGACACCACA+GGG | + | chr3_4:68352641-68352660 | None:intergenic | 50.0% | |
| AGTTAGCCATCTGACACCAC+AGG | + | chr3_4:68352642-68352661 | None:intergenic | 50.0% | |
| CAGGAGCAGAAGTCCGAAAA+GGG | - | chr3_4:68353315-68353334 | Msa0516810:intron | 50.0% | |
| !! | CTTTGGAGCGATCTGTGTCT+AGG | - | chr3_4:68353445-68353464 | Msa0516810:intron | 50.0% |
| AGCGATCTGTGTCTAGGTCA+CGG | - | chr3_4:68353451-68353470 | Msa0516810:intron | 50.0% | |
| TGCTGATCTGGATCTGGATC+TGG | + | chr3_4:68353484-68353503 | None:intergenic | 50.0% | |
| ! | TGGTGATGCTGATCTGGATC+TGG | + | chr3_4:68353490-68353509 | None:intergenic | 50.0% |
| ! | GCTGAACGTGATGGTGATCT+TGG | + | chr3_4:68353615-68353634 | None:intergenic | 50.0% |
| TTGCAGGTTCTGTCTGGTAG+CGG | - | chr3_4:68354043-68354062 | Msa0516810:intron | 50.0% | |
| TCCCTCTCTCTCGAATTCGC+AGG | - | chr3_4:68349266-68349285 | Msa0516810:three_prime_UTR | 55.0% | |
| CCCTGCGAATTCGAGAGAGA+GGG | + | chr3_4:68349270-68349289 | None:intergenic | 55.0% | |
| CCCTCTCTCTCGAATTCGCA+GGG | - | chr3_4:68349267-68349286 | Msa0516810:three_prime_UTR | 55.0% | |
| TCCCTGCGAATTCGAGAGAG+AGG | + | chr3_4:68349271-68349290 | None:intergenic | 55.0% | |
| GCATACGAGGTCGAAGAAGC+TGG | - | chr3_4:68349680-68349699 | Msa0516810:three_prime_UTR | 55.0% | |
| ! | CACTTGAGGCGTTAGCTCAG+TGG | - | chr3_4:68349857-68349876 | Msa0516810:intron | 55.0% |
| AGAGTGGGAGTGGGAGAATC+GGG | - | chr3_4:68350122-68350141 | Msa0516810:intron | 55.0% | |
| CAATAACATGGAGGGCGAGG+AGG | + | chr3_4:68351200-68351219 | None:intergenic | 55.0% | |
| GATGCAATTCGGGGTCGTGA+TGG | - | chr3_4:68351345-68351364 | Msa0516810:intron | 55.0% | |
| TTGTAGGTGGAGCTTGCCCA+TGG | - | chr3_4:68351464-68351483 | Msa0516810:intron | 55.0% | |
| AGTGACAGACGTGGGTATGG+TGG | - | chr3_4:68351506-68351525 | Msa0516810:intron | 55.0% | |
| GACTCCCATCTTCTGCATCC+TGG | - | chr3_4:68352072-68352091 | Msa0516810:intron | 55.0% | |
| CCTGCCAGGATGCAGAAGAT+GGG | + | chr3_4:68352079-68352098 | None:intergenic | 55.0% | |
| TCCTGCCAGGATGCAGAAGA+TGG | + | chr3_4:68352080-68352099 | None:intergenic | 55.0% | |
| TGCCAGACTGACCAGTTGTG+GGG | + | chr3_4:68352491-68352510 | None:intergenic | 55.0% | |
| ! | GGGGTACCAGAATAACCCTG+TGG | - | chr3_4:68352623-68352642 | Msa0516810:intron | 55.0% |
| TTCGGACTTCTGCTCCTGCT+GGG | + | chr3_4:68353313-68353332 | None:intergenic | 55.0% | |
| TTTCGGACTTCTGCTCCTGC+TGG | + | chr3_4:68353314-68353333 | None:intergenic | 55.0% | |
| GCAGGAGCAGAAGTCCGAAA+AGG | - | chr3_4:68353314-68353333 | Msa0516810:intron | 55.0% | |
| GAAGTCCGAAAAGGGCCAGA+AGG | - | chr3_4:68353323-68353342 | Msa0516810:intron | 55.0% | |
| CATCACCAATCAAGCCTGCC+AGG | - | chr3_4:68353502-68353521 | Msa0516810:five_prime_UTR | 55.0% | |
| AATACCTGGCGTGGTGATCG+TGG | + | chr3_4:68353642-68353661 | None:intergenic | 55.0% | |
| GAGTGGGAGTGGGAGAATCG+GGG | - | chr3_4:68350123-68350142 | Msa0516810:intron | 60.0% | |
| GGAGAATCGGGGTGGAGTTG+TGG | - | chr3_4:68350134-68350153 | Msa0516810:intron | 60.0% | |
| GTGGAGCACGGCTCTCTTCA+AGG | - | chr3_4:68350298-68350317 | Msa0516810:CDS | 60.0% | |
| TAGGTGGAGCTTGCCCATGG+AGG | - | chr3_4:68351467-68351486 | Msa0516810:intron | 60.0% | |
| AGCTTGCCCATGGAGGCAGA+GGG | - | chr3_4:68351474-68351493 | Msa0516810:intron | 60.0% | |
| TGATGGCCCTCTGCCTCCAT+GGG | + | chr3_4:68351483-68351502 | None:intergenic | 60.0% | |
| ATGATGGCCCTCTGCCTCCA+TGG | + | chr3_4:68351484-68351503 | None:intergenic | 60.0% | |
| GACAGACGTGGGTATGGTGG+TGG | - | chr3_4:68351509-68351528 | Msa0516810:intron | 60.0% | |
| !! | AGACGTGGGTATGGTGGTGG+TGG | - | chr3_4:68351512-68351531 | Msa0516810:intron | 60.0% |
| CCCATCTTCTGCATCCTGGC+AGG | - | chr3_4:68352076-68352095 | Msa0516810:intron | 60.0% | |
| GGCTTGAGGCTCCCCTCAAA+TGG | - | chr3_4:68352429-68352448 | Msa0516810:CDS | 60.0% | |
| AGCCCCACAACTGGTCAGTC+TGG | - | chr3_4:68352486-68352505 | Msa0516810:intron | 60.0% | |
| TCGGACTTCTGCTCCTGCTG+GGG | + | chr3_4:68353312-68353331 | None:intergenic | 60.0% | |
| CGTGGAGACGCTGAACGTGA+TGG | + | chr3_4:68353624-68353643 | None:intergenic | 60.0% | |
| TGGGAGTGGGAGAATCGGGG+TGG | - | chr3_4:68350126-68350145 | Msa0516810:intron | 65.0% | |
| GAGCTTGCCCATGGAGGCAG+AGG | - | chr3_4:68351473-68351492 | Msa0516810:intron | 65.0% | |
| !! | CGTGGGTATGGTGGTGGTGG+CGG | - | chr3_4:68351515-68351534 | Msa0516810:intron | 65.0% |
| TCCTGCTGGGGCTTCTGCTG+CGG | + | chr3_4:68353300-68353319 | None:intergenic | 65.0% | |
| GTCTCCACGATCACCACGCC+AGG | - | chr3_4:68353635-68353654 | Msa0516810:five_prime_UTR | 65.0% | |
| !! | GGGTATGGTGGTGGTGGCGG+CGG | - | chr3_4:68351518-68351537 | Msa0516810:intron | 70.0% |
| !! | TATGGTGGTGGTGGCGGCGG+TGG | - | chr3_4:68351521-68351540 | Msa0516810:intron | 70.0% |
| !!! | GGTGCTGGTGGGGGCCGTTT+TGG | - | chr3_4:68351566-68351585 | Msa0516810:CDS | 70.0% |
| !! | GCGGCGGTGACGGTGCTGGT+GGG | - | chr3_4:68351555-68351574 | Msa0516810:CDS | 75.0% |
| !! | CGGCGGTGACGGTGCTGGTG+GGG | - | chr3_4:68351556-68351575 | Msa0516810:CDS | 75.0% |
| !! | GGCGGTGACGGTGCTGGTGG+GGG | - | chr3_4:68351557-68351576 | Msa0516810:CDS | 75.0% |
| GCCGCAGCAGAAGCCCCAGC+AGG | - | chr3_4:68353296-68353315 | Msa0516810:five_prime_UTR | 75.0% | |
| !!! | GGTGGTGGTGGCGGCGGTGG+TGG | - | chr3_4:68351524-68351543 | Msa0516810:intron | 80.0% |
| !! | GGTGGCGGCGGTGGTGGCAG+AGG | - | chr3_4:68351530-68351549 | Msa0516810:intron | 80.0% |
| !! | GGCGGCGGTGGTGGCAGAGG+CGG | - | chr3_4:68351533-68351552 | Msa0516810:intron | 80.0% |
| !! | GGCGGTGGTGGCAGAGGCGG+CGG | - | chr3_4:68351536-68351555 | Msa0516810:intron | 80.0% |
| !! | GGTGGTGGCAGAGGCGGCGG+CGG | - | chr3_4:68351539-68351558 | Msa0516810:intron | 80.0% |
| ! | GGCAGAGGCGGCGGCGGTGA+CGG | - | chr3_4:68351545-68351564 | Msa0516810:intron | 80.0% |
| !! | GGCGGCGGTGACGGTGCTGG+TGG | - | chr3_4:68351554-68351573 | Msa0516810:CDS | 80.0% |
| !! | GGCGGCGGCGGTGACGGTGC+TGG | - | chr3_4:68351551-68351570 | Msa0516810:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 68349266 | 68354532 | 68349266 | ID=Msa0516810;Name=Msa0516810 |
| chr3_4 | mRNA | 68349266 | 68354532 | 68349266 | ID=Msa0516810-mRNA-1;Parent=Msa0516810;Name=Msa0516810-mRNA-1;_AED=0.16;_eAED=0.16;_QI=604|1|1|1|0.78|0.66|15|441|271 |
| chr3_4 | exon | 68349266 | 68349487 | 68349266 | ID=Msa0516810-mRNA-1:exon:18015;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68349510 | 68349749 | 68349510 | ID=Msa0516810-mRNA-1:exon:18014;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68350142 | 68350187 | 68350142 | ID=Msa0516810-mRNA-1:exon:18013;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68350275 | 68350358 | 68350275 | ID=Msa0516810-mRNA-1:exon:18012;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68350454 | 68350533 | 68350454 | ID=Msa0516810-mRNA-1:exon:18011;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68350840 | 68350896 | 68350840 | ID=Msa0516810-mRNA-1:exon:18010;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68350993 | 68351042 | 68350993 | ID=Msa0516810-mRNA-1:exon:18009;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68351546 | 68351603 | 68351546 | ID=Msa0516810-mRNA-1:exon:18008;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68351692 | 68351738 | 68351692 | ID=Msa0516810-mRNA-1:exon:18007;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68352184 | 68352328 | 68352184 | ID=Msa0516810-mRNA-1:exon:18006;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68352403 | 68352477 | 68352403 | ID=Msa0516810-mRNA-1:exon:18005;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68352569 | 68352634 | 68352569 | ID=Msa0516810-mRNA-1:exon:18004;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68353206 | 68353320 | 68353206 | ID=Msa0516810-mRNA-1:exon:18003;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68353466 | 68353727 | 68353466 | ID=Msa0516810-mRNA-1:exon:18002;Parent=Msa0516810-mRNA-1 |
| chr3_4 | exon | 68354219 | 68354532 | 68354219 | ID=Msa0516810-mRNA-1:exon:18001;Parent=Msa0516810-mRNA-1 |
| chr3_4 | five_prime_UTR | 68354219 | 68354532 | 68354219 | ID=Msa0516810-mRNA-1:five_prime_utr;Parent=Msa0516810-mRNA-1 |
| chr3_4 | five_prime_UTR | 68353466 | 68353727 | 68353466 | ID=Msa0516810-mRNA-1:five_prime_utr;Parent=Msa0516810-mRNA-1 |
| chr3_4 | five_prime_UTR | 68353293 | 68353320 | 68353293 | ID=Msa0516810-mRNA-1:five_prime_utr;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68353206 | 68353292 | 68353206 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68352569 | 68352634 | 68352569 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68352403 | 68352477 | 68352403 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68352184 | 68352328 | 68352184 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68351692 | 68351738 | 68351692 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68351546 | 68351603 | 68351546 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68350993 | 68351042 | 68350993 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68350840 | 68350896 | 68350840 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68350454 | 68350533 | 68350454 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68350275 | 68350358 | 68350275 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68350142 | 68350187 | 68350142 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | CDS | 68349729 | 68349749 | 68349729 | ID=Msa0516810-mRNA-1:cds;Parent=Msa0516810-mRNA-1 |
| chr3_4 | three_prime_UTR | 68349510 | 68349728 | 68349510 | ID=Msa0516810-mRNA-1:three_prime_utr;Parent=Msa0516810-mRNA-1 |
| chr3_4 | three_prime_UTR | 68349266 | 68349487 | 68349266 | ID=Msa0516810-mRNA-1:three_prime_utr;Parent=Msa0516810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
