Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021470 | XP_003622978.1 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021470 | G7L2B5 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 648 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032780 | Msa1021470 | 0.832370 | 9.828479e-56 | -8.615850e-47 |
| Msa0056470 | Msa1021470 | 0.814069 | 1.859136e-51 | -8.615850e-47 |
| Msa0072420 | Msa1021470 | 0.810174 | 1.314401e-50 | -8.615850e-47 |
| Msa0105370 | Msa1021470 | 0.824444 | 8.047281e-54 | -8.615850e-47 |
| Msa0628410 | Msa1021470 | 0.802209 | 6.252143e-49 | -8.615850e-47 |
| Msa0661300 | Msa1021470 | 0.815966 | 7.052349e-52 | -8.615850e-47 |
| Msa0698780 | Msa1021470 | 0.882268 | 1.201052e-70 | -8.615850e-47 |
| Msa0140820 | Msa1021470 | 0.806762 | 7.028545e-50 | -8.615850e-47 |
| Msa0140850 | Msa1021470 | 0.819522 | 1.111063e-52 | -8.615850e-47 |
| Msa0150300 | Msa1021470 | 0.803747 | 3.007296e-49 | -8.615850e-47 |
| Msa0183090 | Msa1021470 | 0.813369 | 2.650472e-51 | -8.615850e-47 |
| Msa0189700 | Msa1021470 | 0.812664 | 3.784362e-51 | -8.615850e-47 |
| Msa0229230 | Msa1021470 | 0.812405 | 4.310969e-51 | -8.615850e-47 |
| Msa0230490 | Msa1021470 | 0.841139 | 5.696364e-58 | -8.615850e-47 |
| Msa0232010 | Msa1021470 | 0.816694 | 4.844701e-52 | -8.615850e-47 |
| Msa0232080 | Msa1021470 | 0.819721 | 1.000936e-52 | -8.615850e-47 |
| Msa0375310 | Msa1021470 | 0.830321 | 3.136947e-55 | -8.615850e-47 |
| Msa0386800 | Msa1021470 | 0.813262 | 2.797249e-51 | -8.615850e-47 |
| Msa0421500 | Msa1021470 | 0.827093 | 1.892557e-54 | -8.615850e-47 |
| Msa0427150 | Msa1021470 | 0.813774 | 2.159138e-51 | -8.615850e-47 |
| Msa1021470 | Msa1021520 | 0.802604 | 5.185799e-49 | -8.615850e-47 |
| Msa1021470 | Msa1060230 | 0.905808 | 2.901374e-80 | -8.615850e-47 |
| Msa1021470 | Msa1060260 | 0.813234 | 2.838374e-51 | -8.615850e-47 |
| Msa1021470 | Msa1081930 | 0.833730 | 4.509131e-56 | -8.615850e-47 |
| Msa1021470 | Msa1085420 | 0.834877 | 2.324139e-56 | -8.615850e-47 |
| Msa1021470 | Msa1105460 | 0.885240 | 9.644060e-72 | -8.615850e-47 |
| Msa1021470 | Msa1126830 | 0.850258 | 1.907739e-60 | -8.615850e-47 |
| Msa1021470 | Msa1148910 | 0.925330 | 2.122870e-90 | -8.615850e-47 |
| Msa1021470 | Msa1165780 | 0.804653 | 1.947832e-49 | -8.615850e-47 |
| Msa1021470 | Msa1165940 | 0.839254 | 1.768854e-57 | -8.615850e-47 |
| Msa1021470 | Msa1174780 | 0.814779 | 1.294502e-51 | -8.615850e-47 |
| Msa1021470 | Msa1299590 | 0.806567 | 7.725504e-50 | -8.615850e-47 |
| Msa1021470 | Msa1341060 | 0.806861 | 6.697996e-50 | -8.615850e-47 |
| Msa1021470 | Msa1342410 | 0.814362 | 1.601722e-51 | -8.615850e-47 |
| Msa1021470 | Msa1362210 | 0.807050 | 6.107350e-50 | -8.615850e-47 |
| Msa1021470 | Msa1364480 | 0.859722 | 3.397785e-63 | -8.615850e-47 |
| Msa1021470 | Msa1365140 | 0.832445 | 9.413834e-56 | -8.615850e-47 |
| Msa1021470 | Msa1367890 | 0.800253 | 1.571674e-48 | -8.615850e-47 |
| Msa1021470 | Msa1435390 | 0.802886 | 4.533693e-49 | -8.615850e-47 |
| Msa0258390 | Msa1021470 | 0.815577 | 8.607368e-52 | -8.615850e-47 |
| Msa0317910 | Msa1021470 | 0.834856 | 2.352861e-56 | -8.615850e-47 |
| Msa0335730 | Msa1021470 | 0.813365 | 2.656243e-51 | -8.615850e-47 |
| Msa0336010 | Msa1021470 | 0.805349 | 1.393268e-49 | -8.615850e-47 |
| Msa0513990 | Msa1021470 | 0.842938 | 1.904422e-58 | -8.615850e-47 |
| Msa0516810 | Msa1021470 | 0.807914 | 4.004448e-50 | -8.615850e-47 |
| Msa0524110 | Msa1021470 | 0.834802 | 2.427329e-56 | -8.615850e-47 |
| Msa0556060 | Msa1021470 | 0.810328 | 1.217461e-50 | -8.615850e-47 |
| Msa0581110 | Msa1021470 | 0.850546 | 1.583953e-60 | -8.615850e-47 |
| Msa0588360 | Msa1021470 | 0.830281 | 3.208217e-55 | -8.615850e-47 |
| Msa0881290 | Msa1021470 | 0.811750 | 5.989083e-51 | -8.615850e-47 |
| Msa0944680 | Msa1021470 | 0.809813 | 1.571906e-50 | -8.615850e-47 |
| Msa0953310 | Msa1021470 | 0.804033 | 2.622843e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021470 | MtrunA17_Chr7g0237631 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 648 |
| Msa1021470 | MtrunA17_Chr3g0129471 | 63.158 | 114 | 42 | 0 | 29 | 142 | 1 | 114 | 1.69e-45 | 155 |
| Msa1021470 | MtrunA17_Chr3g0129481 | 62.281 | 114 | 43 | 0 | 29 | 142 | 1 | 114 | 1.88e-45 | 155 |
| Msa1021470 | MtrunA17_Chr3g0129501 | 62.281 | 114 | 43 | 0 | 29 | 142 | 1 | 114 | 2.88e-45 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021470 | AT3G07030.2 | 63.981 | 211 | 65 | 5 | 1 | 209 | 1 | 202 | 6.13e-78 | 245 |
| Msa1021470 | AT3G07030.3 | 63.981 | 211 | 65 | 5 | 1 | 209 | 1 | 202 | 6.13e-78 | 245 |
| Msa1021470 | AT3G07030.4 | 63.981 | 211 | 65 | 5 | 1 | 209 | 1 | 202 | 7.67e-78 | 245 |
| Msa1021470 | AT3G07030.5 | 77.305 | 141 | 32 | 0 | 1 | 141 | 1 | 141 | 9.28e-76 | 241 |
| Msa1021470 | AT3G07030.1 | 74.510 | 153 | 37 | 1 | 1 | 153 | 1 | 151 | 6.67e-75 | 238 |
| Msa1021470 | AT1G20220.1 | 62.222 | 135 | 51 | 0 | 1 | 135 | 1 | 135 | 6.00e-54 | 181 |
Find 200 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTCATGAAACTGATT+TGG | 0.209849 | 7_1:-45871216 | Msa1021470:three_prime_UTR |
| GGAGGCAGAGGTGGAGGATA+TGG | 0.242926 | 7_1:-45871584 | Msa1021470:CDS |
| ATCTGTATCTGGTTTCTATA+TGG | 0.244819 | 7_1:-45871091 | Msa1021470:three_prime_UTR |
| TGGACGGAAGCATAAATAAA+TGG | 0.256574 | 7_1:-45875954 | None:intergenic |
| GGTGGCAGGGGTGGAGGTTA+TGG | 0.269384 | 7_1:-45871653 | Msa1021470:CDS |
| GGCAGGGGAGGCAGGGGATA+TGG | 0.278931 | 7_1:-45871416 | Msa1021470:CDS |
| GGAAGGGGAGAGAAATTAAT+TGG | 0.282017 | 7_1:+45875865 | None:intergenic |
| CAGAGGTTGCTGCTGATAAT+TGG | 0.289288 | 7_1:+45872522 | None:intergenic |
| TAGAGGGAGAGGTAGGAATT+GGG | 0.296049 | 7_1:-45872355 | Msa1021470:CDS |
| AAATGGTTAAATTAAATAAA+AGG | 0.296820 | 7_1:-45875937 | Msa1021470:five_prime_UTR |
| GGAGGGTATGGTGGAGGCAG+AGG | 0.303211 | 7_1:-45871596 | Msa1021470:CDS |
| GGCAGAGGTGGAGGGTATGG+TGG | 0.314076 | 7_1:-45871605 | Msa1021470:CDS |
| TTACGCCACTTCGCTTCTTC+AGG | 0.337074 | 7_1:-45875666 | Msa1021470:intron |
| TCTCTTCATGAAACTGATTT+GGG | 0.337371 | 7_1:-45871215 | Msa1021470:three_prime_UTR |
| GTAGAGGGAGAGGTAGGAAT+TGG | 0.337973 | 7_1:-45872356 | Msa1021470:CDS |
| GGAGGTCGAGGCAGAGGTTG+GGG | 0.340331 | 7_1:-45872116 | Msa1021470:CDS |
| AGGCAGAGGTGGAGGTGGTA+TGG | 0.341830 | 7_1:-45871480 | Msa1021470:CDS |
| GGGTATGGTGGAGGCAGAGG+TGG | 0.347375 | 7_1:-45871593 | Msa1021470:CDS |
| TTGATGGGAGTTTCAGGTTT+GGG | 0.347434 | 7_1:+45875740 | None:intergenic |
| GGAGGATATGGAGGAGGCAG+AGG | 0.356089 | 7_1:-45871572 | Msa1021470:CDS |
| AGGGGATATGGCCGTGGTAG+GGG | 0.356274 | 7_1:-45871404 | Msa1021470:CDS |
| GGAGGCAGAGGTGGAGGAAT+GGG | 0.356302 | 7_1:-45871512 | Msa1021470:CDS |
| GGGAGGTCGAGGCAGAGGTT+GGG | 0.358280 | 7_1:-45872117 | Msa1021470:CDS |
| GGAGGTTATGGAGGCAGAGG+TGG | 0.360488 | 7_1:-45871641 | Msa1021470:CDS |
| ATGGTGTTGGCAACCATAAA+AGG | 0.361711 | 7_1:+45871120 | None:intergenic |
| GGAGGTTATGAAGGTGGCAG+GGG | 0.362253 | 7_1:-45871665 | Msa1021470:CDS |
| AGAAAGAGGTAGAGAGAGAA+GGG | 0.363750 | 7_1:+45875799 | None:intergenic |
| ATCTCAATCACCTTGTCAAC+TGG | 0.366031 | 7_1:-45872780 | Msa1021470:CDS |
| AGAGGTAGGAATTGGGGAAG+GGG | 0.371584 | 7_1:-45872348 | Msa1021470:CDS |
| GGCAGAGGTGGTGGTTATGA+AGG | 0.375366 | 7_1:-45871557 | Msa1021470:CDS |
| GGTTATGAAGGTGGCAGGGG+TGG | 0.377101 | 7_1:-45871662 | Msa1021470:CDS |
| GGTTATGGAGGCAGAGGTGG+AGG | 0.378092 | 7_1:-45871638 | Msa1021470:CDS |
| ATGAAAGAGGCAGGGGAGGC+AGG | 0.389315 | 7_1:-45871424 | Msa1021470:CDS |
| GGCAGAGGTGGAGGTTATGA+AGG | 0.392200 | 7_1:-45871533 | Msa1021470:CDS |
| GGTGGTTACGGTGGCGGCAG+AGG | 0.397117 | 7_1:-45871761 | Msa1021470:CDS |
| AATTGGGGAAGGGGTGGTTA+TGG | 0.397399 | 7_1:-45872339 | Msa1021470:CDS |
| TTTGATTGTTCAGCAGTAGA+TGG | 0.398319 | 7_1:+45872553 | None:intergenic |
| CAGGGGATATGGCCGTGGTA+GGG | 0.401235 | 7_1:-45871405 | Msa1021470:CDS |
| TATGAAGGTGGCAGGGGTGG+AGG | 0.404403 | 7_1:-45871659 | Msa1021470:CDS |
| TATGGTGGAGGCAGAGGTGG+AGG | 0.406225 | 7_1:-45871590 | Msa1021470:CDS |
| CGAGGTCGTGGTCGAGGTAG+AGG | 0.410909 | 7_1:-45872372 | Msa1021470:CDS |
| GGGTATTCTAATCGCGGCCG+AGG | 0.414512 | 7_1:-45872140 | Msa1021470:CDS |
| TACGGTGGCGGCAGAGGTGG+AGG | 0.416974 | 7_1:-45871755 | Msa1021470:CDS |
| TATGTAGGAGGCAGAGGTGG+AGG | 0.417081 | 7_1:-45871488 | Msa1021470:CDS |
| TATGAAGGAGGCAGAGGTGG+AGG | 0.418741 | 7_1:-45871518 | Msa1021470:CDS |
| TATGGAGGAGGCAGAGGTGG+TGG | 0.420030 | 7_1:-45871566 | Msa1021470:CDS |
| TACGAAGGAGGCAGAGGTGG+AGG | 0.420303 | 7_1:-45871614 | Msa1021470:CDS |
| CGGTACAAGACCCTCTTCAA+TGG | 0.422390 | 7_1:+45872924 | None:intergenic |
| GGCAGAGGTGGAGGTGGTAT+GGG | 0.422763 | 7_1:-45871479 | Msa1021470:CDS |
| GAGAGAAGGGGAAAATGAAA+TGG | 0.425648 | 7_1:+45875812 | None:intergenic |
| GGAGGTTATGAAGGAGGCAG+AGG | 0.426160 | 7_1:-45871524 | Msa1021470:CDS |
| GATAATTTGCATATCCACTT+TGG | 0.429974 | 7_1:+45872271 | None:intergenic |
| GGGGAGGTCGAGGCAGAGGT+TGG | 0.431992 | 7_1:-45872118 | Msa1021470:CDS |
| ATGGGTTATGTAGGAGGCAG+AGG | 0.432225 | 7_1:-45871494 | Msa1021470:CDS |
| GGTAGGAATTGGGGAAGGGG+TGG | 0.434417 | 7_1:-45872345 | Msa1021470:CDS |
| GGCAGGGGTGGAGGTTATGG+AGG | 0.435134 | 7_1:-45871650 | Msa1021470:CDS |
| GGAGGTTATGAAGGTGGTAG+AGG | 0.437789 | 7_1:-45871737 | Msa1021470:CDS |
| TATGAAGGTGGTAGAGGTGG+AGG | 0.441657 | 7_1:-45871731 | Msa1021470:CDS |
| GGAGGCAGAGGTGGAGGGTA+TGG | 0.444048 | 7_1:-45871608 | Msa1021470:CDS |
| TGACAAGGTGATTGAGATCA+TGG | 0.445665 | 7_1:+45872785 | None:intergenic |
| GGTTATGAAGGAGGCAGAGG+TGG | 0.447746 | 7_1:-45871521 | Msa1021470:CDS |
| GGTTACGGTGGCGGCAGAGG+TGG | 0.448266 | 7_1:-45871758 | Msa1021470:CDS |
| AACCTTCTGGTACCTGTCCA+TGG | 0.450777 | 7_1:+45875769 | None:intergenic |
| GGCAGAGGTGGAGGATATGG+AGG | 0.452442 | 7_1:-45871581 | Msa1021470:CDS |
| GTTGATGGGAGTTTCAGGTT+TGG | 0.453613 | 7_1:+45875739 | None:intergenic |
| TATGAAGGAGGCAGAGGTGG+AGG | 0.457131 | 7_1:-45871542 | Msa1021470:CDS |
| AGAGGGAGAGGTAGGAATTG+GGG | 0.457224 | 7_1:-45872354 | Msa1021470:CDS |
| AGGAGGCAGAGGTGGAGGAA+TGG | 0.458248 | 7_1:-45871513 | Msa1021470:CDS |
| GAGGTCGAGGCAGAGGTTGG+GGG | 0.460450 | 7_1:-45872115 | Msa1021470:CDS |
| ACACCCATTGCTATCATGCC+TGG | 0.462592 | 7_1:+45871345 | None:intergenic |
| AGAGGTGGAGGTGGTTATGA+AGG | 0.463581 | 7_1:-45871719 | Msa1021470:CDS |
| TGTTCATCTTTAGATTTAGC+TGG | 0.463992 | 7_1:-45871184 | Msa1021470:three_prime_UTR |
| GGAAATTACCAAGGTGGATA+CGG | 0.464107 | 7_1:-45872300 | Msa1021470:CDS |
| TTGCAGTATCTTGGTGCAAA+GGG | 0.465007 | 7_1:+45872980 | None:intergenic |
| AGGAGGCAGAGGTGGAGGTA+TGG | 0.467630 | 7_1:-45871450 | Msa1021470:CDS |
| TATGGCTATCAAGGTGGGTA+TGG | 0.468309 | 7_1:-45872321 | Msa1021470:CDS |
| CTGAGCTGATTGCAGTATCT+TGG | 0.471182 | 7_1:+45872971 | None:intergenic |
| AGCAAAAGAGATTGTCTTGA+AGG | 0.471497 | 7_1:-45873322 | Msa1021470:CDS |
| GGTGGTTATGAAGGTGGCAG+AGG | 0.471529 | 7_1:-45871710 | Msa1021470:CDS |
| GCAGGGGATATGGCCGTGGT+AGG | 0.471829 | 7_1:-45871406 | Msa1021470:CDS |
| GACTCGTATGGCCGAGGTCG+TGG | 0.474535 | 7_1:-45872384 | Msa1021470:CDS |
| GGTATTCTAATCGCGGCCGA+GGG | 0.475354 | 7_1:-45872139 | Msa1021470:CDS |
| GGAGGGTACGAAGGAGGCAG+AGG | 0.475761 | 7_1:-45871620 | Msa1021470:CDS |
| GAGATTGTCTTGAAGGCAAT+GGG | 0.476181 | 7_1:-45873315 | Msa1021470:CDS |
| TGAAAGAGGCAGGGGAGGCA+GGG | 0.477286 | 7_1:-45871423 | Msa1021470:CDS |
| TTTCTCTCTCTGCCATGGAC+AGG | 0.477643 | 7_1:-45875781 | Msa1021470:exon |
| ATGGATGGACGTGGTGGTAG+AGG | 0.477718 | 7_1:-45871377 | Msa1021470:CDS |
| GGTTATGAAGGAGGCAGAGG+TGG | 0.478456 | 7_1:-45871545 | Msa1021470:CDS |
| GGAGGCAGAGGTGGAGGTAT+GGG | 0.480716 | 7_1:-45871449 | Msa1021470:CDS |
| GTGGAGGTTATGAAGGTGGC+AGG | 0.481847 | 7_1:-45871667 | Msa1021470:CDS |
| TCTTATAATGCTGTAAATGA+AGG | 0.481848 | 7_1:-45872484 | Msa1021470:intron |
| GGTGGTTATGAAGGAGGCAG+AGG | 0.483538 | 7_1:-45871548 | Msa1021470:CDS |
| GGAGGCAGGGGATATGGCCG+TGG | 0.483577 | 7_1:-45871410 | Msa1021470:CDS |
| TAACCTTAAAACCCTAGAAA+AGG | 0.486941 | 7_1:+45875844 | None:intergenic |
| GTATGGGTTATGAAAGAGGC+AGG | 0.487261 | 7_1:-45871433 | Msa1021470:CDS |
| GGTGGAGGAATGGGTTATGT+AGG | 0.489046 | 7_1:-45871503 | Msa1021470:CDS |
| ACCTCTTTCTCTCTCTGCCA+TGG | 0.489795 | 7_1:-45875786 | Msa1021470:exon |
| AGAGGTGGAGGGTATGGTGG+AGG | 0.489831 | 7_1:-45871602 | Msa1021470:CDS |
| GAATTGAACACAAATTCTCC+TGG | 0.491912 | 7_1:-45872756 | Msa1021470:CDS |
| GGTCGTGGTGGAGGTTATGA+AGG | 0.492926 | 7_1:-45871674 | Msa1021470:CDS |
| TATGAAGGTGGTCGTGGTGG+AGG | 0.494891 | 7_1:-45871683 | Msa1021470:CDS |
| GGGTACGAAGGAGGCAGAGG+TGG | 0.495025 | 7_1:-45871617 | Msa1021470:CDS |
| GGATATGGAGGAGGCAGAGG+TGG | 0.495944 | 7_1:-45871569 | Msa1021470:CDS |
| GAGAAAGAGGTAGAGAGAGA+AGG | 0.496050 | 7_1:+45875798 | None:intergenic |
| TGGCCGTGGTAGGGGAAGAA+TGG | 0.496897 | 7_1:-45871396 | Msa1021470:CDS |
| TACGAAGGAGGCAGAGGTGG+AGG | 0.500034 | 7_1:-45871455 | Msa1021470:CDS |
| GGTTATGAAGGTGGTAGAGG+TGG | 0.500241 | 7_1:-45871734 | Msa1021470:CDS |
| GGAGGAATGGGTTATGTAGG+AGG | 0.500534 | 7_1:-45871500 | Msa1021470:CDS |
| GGTGGCAGAGGTGGCTATGA+AGG | 0.502655 | 7_1:-45871698 | Msa1021470:CDS |
| GAAAGAGGCAGGGGAGGCAG+GGG | 0.505244 | 7_1:-45871422 | Msa1021470:CDS |
| AGTGGATATGCAAATTATCA+AGG | 0.505245 | 7_1:-45872267 | Msa1021470:intron |
| GAGAGGTAGGAATTGGGGAA+GGG | 0.510893 | 7_1:-45872349 | Msa1021470:CDS |
| GGAGAGAAATTAATTGGAAA+GGG | 0.511517 | 7_1:+45875871 | None:intergenic |
| TGGAGGTTATGAAGGTGGCA+GGG | 0.512822 | 7_1:-45871666 | Msa1021470:CDS |
| GGTGGAGGTTATGGAGGCAG+AGG | 0.517048 | 7_1:-45871644 | Msa1021470:CDS |
| GGCAGAGGTGGAGGTTATGA+AGG | 0.517385 | 7_1:-45871746 | Msa1021470:CDS |
| GGAGAGGTAGGAATTGGGGA+AGG | 0.518873 | 7_1:-45872350 | Msa1021470:CDS |
| TCATGAAACTGATTTGGGCA+AGG | 0.522891 | 7_1:-45871210 | Msa1021470:three_prime_UTR |
| GGAGGTATGGGTTATGAAAG+AGG | 0.523038 | 7_1:-45871437 | Msa1021470:CDS |
| CGTGGTCGAGGTAGAGGGAG+AGG | 0.524222 | 7_1:-45872366 | Msa1021470:CDS |
| AAACCAGGCATGATAGCAAT+GGG | 0.524237 | 7_1:-45871348 | Msa1021470:exon |
| GGTACAAGACCCTCTTCAAT+GGG | 0.524827 | 7_1:+45872925 | None:intergenic |
| GTAGGAGGCAGAGGTGGAGG+TGG | 0.525707 | 7_1:-45871485 | Msa1021470:CDS |
| GCATTATAAGAATCCTGTGC+TGG | 0.525963 | 7_1:+45872496 | None:intergenic |
| ATGGGTTACGAAGGAGGCAG+AGG | 0.532052 | 7_1:-45871461 | Msa1021470:CDS |
| GGTTATGTAGGAGGCAGAGG+TGG | 0.532100 | 7_1:-45871491 | Msa1021470:CDS |
| AAGAAAAGAGAGTGAGAGTG+AGG | 0.532238 | 7_1:-45875911 | Msa1021470:five_prime_UTR |
| GGGAGAGAAATTAATTGGAA+AGG | 0.534134 | 7_1:+45875870 | None:intergenic |
| GGTGGAGGTGGTTATGAAGG+TGG | 0.535779 | 7_1:-45871716 | Msa1021470:CDS |
| ATGGGTTATGAAAGAGGCAG+GGG | 0.536952 | 7_1:-45871431 | Msa1021470:CDS |
| TATGGCCGAGGTCGTGGTCG+AGG | 0.538984 | 7_1:-45872378 | Msa1021470:CDS |
| GAATCCTGTGCTGGTTTCAG+AGG | 0.539391 | 7_1:+45872505 | None:intergenic |
| GGTGGCTATGAAGGTGGTCG+TGG | 0.541622 | 7_1:-45871689 | Msa1021470:CDS |
| GATGGACGTGGTGGTAGAGG+TGG | 0.541630 | 7_1:-45871374 | Msa1021470:CDS |
| GAAAGAGGTAGAGAGAGAAG+GGG | 0.543432 | 7_1:+45875800 | None:intergenic |
| GGCTATGAAGGTGGTCGTGG+TGG | 0.544263 | 7_1:-45871686 | Msa1021470:CDS |
| TCCATGGCAGAGAGAGAAAG+AGG | 0.545152 | 7_1:+45875785 | None:intergenic |
| GGCAGAGGTGGAGGGTACGA+AGG | 0.546349 | 7_1:-45871629 | Msa1021470:CDS |
| AGGGGTGGTTATGGCTATCA+AGG | 0.547547 | 7_1:-45872330 | Msa1021470:CDS |
| ATAACATAACTGCACTGTCA+AGG | 0.550539 | 7_1:+45871296 | None:intergenic |
| AGAGATTGTCTTGAAGGCAA+TGG | 0.551588 | 7_1:-45873316 | Msa1021470:CDS |
| CTTAAAACCCTAGAAAAGGA+AGG | 0.553581 | 7_1:+45875848 | None:intergenic |
| TAACATAACTGCACTGTCAA+GGG | 0.561421 | 7_1:+45871297 | None:intergenic |
| GGTTACGAAGGAGGCAGAGG+TGG | 0.561639 | 7_1:-45871458 | Msa1021470:CDS |
| CGTGGTAGGGGAAGAATGGA+TGG | 0.561990 | 7_1:-45871392 | Msa1021470:CDS |
| TTTCTAGACTCGTATGGCCG+AGG | 0.563458 | 7_1:-45872390 | Msa1021470:intron |
| GTCGAGGTAGAGGGAGAGGT+AGG | 0.564538 | 7_1:-45872362 | Msa1021470:CDS |
| GGTTATGAAGGTGGCAGAGG+TGG | 0.565556 | 7_1:-45871707 | Msa1021470:CDS |
| AGAGGTGGAGGGTACGAAGG+AGG | 0.566762 | 7_1:-45871626 | Msa1021470:CDS |
| TGATAGTATGATGTTGCTCA+TGG | 0.567858 | 7_1:-45871260 | Msa1021470:three_prime_UTR |
| TGGTAGAGGTGGAGAAAACC+AGG | 0.569362 | 7_1:-45871363 | Msa1021470:CDS |
| TTAAAACCCTAGAAAAGGAA+GGG | 0.574652 | 7_1:+45875849 | None:intergenic |
| GAAGGTGGTAGAGGTGGAGG+TGG | 0.574900 | 7_1:-45871728 | Msa1021470:CDS |
| ATTGCAGTATCTTGGTGCAA+AGG | 0.575004 | 7_1:+45872979 | None:intergenic |
| GGTGGTATGGGTTACGAAGG+AGG | 0.575326 | 7_1:-45871467 | Msa1021470:CDS |
| AAAACCAGGCATGATAGCAA+TGG | 0.579456 | 7_1:-45871349 | Msa1021470:exon |
| TACCTTCAGAATCTCTGCAA+TGG | 0.580155 | 7_1:+45873269 | None:intergenic |
| ACGAAGGAGGCAGAGGTGGA+GGG | 0.581836 | 7_1:-45871613 | Msa1021470:CDS |
| GAGATCCGTATCACTACTCA+AGG | 0.583167 | 7_1:-45875710 | Msa1021470:CDS |
| GTGGTTATGGCTATCAAGGT+GGG | 0.583212 | 7_1:-45872326 | Msa1021470:CDS |
| AGTTAGCATAACAGATGTGT+GGG | 0.583306 | 7_1:-45872950 | Msa1021470:CDS |
| GGTAATAGCCGTATCCACCT+TGG | 0.584370 | 7_1:+45872292 | None:intergenic |
| GTTCAATTCTCCAGTTGACA+AGG | 0.584863 | 7_1:+45872770 | None:intergenic |
| TGGCGCCTTGAGTAGTGATA+CGG | 0.584965 | 7_1:+45875705 | None:intergenic |
| GGTTATGAAAGAGGCAGGGG+AGG | 0.585553 | 7_1:-45871428 | Msa1021470:CDS |
| AGAGGTGGAGGATATGGAGG+AGG | 0.586063 | 7_1:-45871578 | Msa1021470:CDS |
| TATGGGTTATGAAAGAGGCA+GGG | 0.586895 | 7_1:-45871432 | Msa1021470:CDS |
| GAGGTCGTGGTCGAGGTAGA+GGG | 0.588127 | 7_1:-45872371 | Msa1021470:CDS |
| TGCTGCTGATAATTGGAGTG+TGG | 0.589124 | 7_1:+45872529 | None:intergenic |
| CTCTACCTCGACCACGACCT+CGG | 0.592109 | 7_1:+45872373 | None:intergenic |
| GGAAGAATGGATGGACGTGG+TGG | 0.593817 | 7_1:-45871383 | Msa1021470:CDS |
| TATTCTAATCGCGGCCGAGG+GGG | 0.597199 | 7_1:-45872137 | Msa1021470:CDS |
| GTGTGGGAGCCCATTGAAGA+GGG | 0.607655 | 7_1:-45872934 | Msa1021470:CDS |
| CGTGGTGGAGGTTATGAAGG+TGG | 0.609599 | 7_1:-45871671 | Msa1021470:CDS |
| CAGTTAGCATAACAGATGTG+TGG | 0.612311 | 7_1:-45872951 | Msa1021470:CDS |
| GTAAGTGATGTAGTTACGAA+TGG | 0.612718 | 7_1:+45875685 | None:intergenic |
| AGAGGTGGTGGTTATGAAGG+AGG | 0.614413 | 7_1:-45871554 | Msa1021470:CDS |
| GGAGGTGGTATGGGTTACGA+AGG | 0.614581 | 7_1:-45871470 | Msa1021470:CDS |
| GGTGGTTATGGCTATCAAGG+TGG | 0.617759 | 7_1:-45872327 | Msa1021470:CDS |
| AATTGAACACAAATTCTCCT+GGG | 0.623115 | 7_1:-45872755 | Msa1021470:intron |
| TAAAACCCTAGAAAAGGAAG+GGG | 0.623768 | 7_1:+45875850 | None:intergenic |
| TGTGTGGGAGCCCATTGAAG+AGG | 0.624055 | 7_1:-45872935 | Msa1021470:CDS |
| TGCCATTGCAGAGATTCTGA+AGG | 0.625612 | 7_1:-45873271 | Msa1021470:intron |
| TGCCATGGACAGGTACCAGA+AGG | 0.626822 | 7_1:-45875771 | Msa1021470:exon |
| GGCAGAGGTGGCTATGAAGG+TGG | 0.627200 | 7_1:-45871695 | Msa1021470:CDS |
| GGTTCCTGACAGATAATGGT+GGG | 0.628649 | 7_1:-45872160 | Msa1021470:intron |
| CATCCATTCTTCCCCTACCA+CGG | 0.628907 | 7_1:+45871393 | None:intergenic |
| GTTATGGAGGCAGAGGTGGA+GGG | 0.630921 | 7_1:-45871637 | Msa1021470:CDS |
| AGAGGTGGAGGTTATGAAGG+AGG | 0.632338 | 7_1:-45871530 | Msa1021470:CDS |
| GCAACCTCTGAAACCAGCAC+AGG | 0.640267 | 7_1:-45872509 | Msa1021470:CDS |
| ATTGACCTGAAGAAGCGAAG+TGG | 0.643111 | 7_1:+45875661 | None:intergenic |
| AGAGGTGGAGGTTATGAAGG+TGG | 0.648731 | 7_1:-45871743 | Msa1021470:CDS |
| AGGGGAAGAATGGATGGACG+TGG | 0.649748 | 7_1:-45871386 | Msa1021470:CDS |
| ATTGCAGTGTGGAAATGACT+CGG | 0.663461 | 7_1:-45872815 | Msa1021470:intron |
| TGCAGTATCTTGGTGCAAAG+GGG | 0.673020 | 7_1:+45872981 | None:intergenic |
| TGGTTCCTGACAGATAATGG+TGG | 0.678431 | 7_1:-45872161 | Msa1021470:intron |
| GGATACGGCTATTACCAAAG+TGG | 0.688906 | 7_1:-45872285 | Msa1021470:CDS |
| AATGGTGGGTATTCTAATCG+CGG | 0.696447 | 7_1:-45872146 | Msa1021470:CDS |
| GGGTATGGAAATTACCAAGG+TGG | 0.696935 | 7_1:-45872306 | Msa1021470:CDS |
| GGTGGGTATGGAAATTACCA+AGG | 0.700461 | 7_1:-45872309 | Msa1021470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGGTTAAATTAAATAAA+AGG | - | chr7_1:45870979-45870998 | Msa1021470:three_prime_UTR | 10.0% |
| !!! | TATTGCTTAATAATATTTTA+GGG | + | chr7_1:45872110-45872129 | None:intergenic | 10.0% |
| !!! | ATATTGCTTAATAATATTTT+AGG | + | chr7_1:45872111-45872130 | None:intergenic | 10.0% |
| !! | AAAATATTATTAAGCAATAT+TGG | - | chr7_1:45872111-45872130 | Msa1021470:CDS | 10.0% |
| !! | AAATATTATTAAGCAATATT+GGG | - | chr7_1:45872112-45872131 | Msa1021470:CDS | 10.0% |
| !!! | TTAAATTTTTATTGAAGTTT+TGG | - | chr7_1:45872225-45872244 | Msa1021470:intron | 10.0% |
| !! | AGATTAAAATTATAAAAACT+TGG | + | chr7_1:45873072-45873091 | None:intergenic | 10.0% |
| !! | AAAAATTTAAAGAACATATA+AGG | + | chr7_1:45873702-45873721 | None:intergenic | 10.0% |
| !! | TAAAAATTCTTAAGCAATAT+TGG | - | chr7_1:45871998-45872017 | Msa1021470:intron | 15.0% |
| !! | AAAAATTCTTAAGCAATATT+GGG | - | chr7_1:45871999-45872018 | Msa1021470:intron | 15.0% |
| !! | ACAATATAATAATAGCTAAA+GGG | + | chr7_1:45872587-45872606 | None:intergenic | 15.0% |
| !! | TACAATATAATAATAGCTAA+AGG | + | chr7_1:45872588-45872607 | None:intergenic | 15.0% |
| !!! | GTTAGTATGATATTTTTTAA+TGG | - | chr7_1:45872631-45872650 | Msa1021470:intron | 15.0% |
| !! | ATATACATTAAACATGTAAA+AGG | + | chr7_1:45873257-45873276 | None:intergenic | 15.0% |
| !!! | GAATAAAAATGTTTTTTGAA+CGG | + | chr7_1:45873353-45873372 | None:intergenic | 15.0% |
| !!! | AAGTTTTTTATTCTAACTTT+TGG | + | chr7_1:45873832-45873851 | None:intergenic | 15.0% |
| !! | AGAATAAAAAACTTAAAATC+TGG | - | chr7_1:45873838-45873857 | Msa1021470:intron | 15.0% |
| !! | AAAATTTCAAACAAAACTTA+CGG | + | chr7_1:45874015-45874034 | None:intergenic | 15.0% |
| !!! | TCCATAATTTTTTTTCTATT+TGG | - | chr7_1:45874050-45874069 | Msa1021470:intron | 15.0% |
| !!! | CCATAATTTTTTTTCTATTT+GGG | - | chr7_1:45874051-45874070 | Msa1021470:intron | 15.0% |
| !! | TATATTAGCTATTCATTAAT+AGG | - | chr7_1:45874472-45874491 | Msa1021470:intron | 15.0% |
| !!! | AAAGAAAGTATAGATATAAT+AGG | + | chr7_1:45874976-45874995 | None:intergenic | 15.0% |
| !!! | TCAAATTTTTCACATTTTTA+AGG | - | chr7_1:45875134-45875153 | Msa1021470:intron | 15.0% |
| !! | GAAAAAAAAAACATAAATGA+TGG | + | chr7_1:45875683-45875702 | None:intergenic | 15.0% |
| !!! | ATTGTTGATTAATGAAATGA+TGG | - | chr7_1:45871448-45871467 | Msa1021470:CDS | 20.0% |
| !!! | TTGTTGATTAATGAAATGAT+GGG | - | chr7_1:45871449-45871468 | Msa1021470:CDS | 20.0% |
| !!! | TTTTGTTGTTTTTGTTTTTG+TGG | - | chr7_1:45871626-45871645 | Msa1021470:CDS | 20.0% |
| !!! | TTTGTTGTTTTTGTTTTTGT+GGG | - | chr7_1:45871627-45871646 | Msa1021470:CDS | 20.0% |
| !! | AAATTGGAGATGTTAAAATT+AGG | - | chr7_1:45872135-45872154 | Msa1021470:CDS | 20.0% |
| !! | TACTGAAATAATAATCCATT+AGG | + | chr7_1:45872287-45872306 | None:intergenic | 20.0% |
| !!! | TTGTAAGTTGAAACAAAATT+TGG | - | chr7_1:45872502-45872521 | Msa1021470:CDS | 20.0% |
| !! | AAAACTACTAAATCACTTTA+AGG | - | chr7_1:45872534-45872553 | Msa1021470:CDS | 20.0% |
| !! | AAACTACTAAATCACTTTAA+GGG | - | chr7_1:45872535-45872554 | Msa1021470:CDS | 20.0% |
| !!! | ATGATATTTTTTAATGGTCT+CGG | - | chr7_1:45872637-45872656 | Msa1021470:intron | 20.0% |
| !! | GTCAGAAAAATTGAAAATTA+TGG | + | chr7_1:45873102-45873121 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGACTTCAATATA+TGG | - | chr7_1:45873111-45873130 | Msa1021470:intron | 20.0% |
| !! | TGAAACTTATGTTTAAATTC+AGG | - | chr7_1:45873162-45873181 | Msa1021470:intron | 20.0% |
| !!! | AAACATTTTTATTCTTACTG+TGG | - | chr7_1:45873359-45873378 | Msa1021470:intron | 20.0% |
| !!! | TAATTTCAGGTAAATGAAAT+AGG | + | chr7_1:45873466-45873485 | None:intergenic | 20.0% |
| !! | AAATACAAAACGTTATAAGA+TGG | + | chr7_1:45873559-45873578 | None:intergenic | 20.0% |
| !! | AATTTAAAGAACATATAAGG+AGG | + | chr7_1:45873699-45873718 | None:intergenic | 20.0% |
| !! | CCCAAATAGAAAAAAAATTA+TGG | + | chr7_1:45874054-45874073 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTCTATTTGGG+TGG | - | chr7_1:45874054-45874073 | Msa1021470:intron | 20.0% |
| !! | TAAGATCATGAAAATAGTTA+CGG | + | chr7_1:45874193-45874212 | None:intergenic | 20.0% |
| !! | TTCATTATCATCAGATAATA+CGG | + | chr7_1:45874863-45874882 | None:intergenic | 20.0% |
| !!! | AATTTTTCACATTTTTAAGG+TGG | - | chr7_1:45875137-45875156 | Msa1021470:intron | 20.0% |
| !!! | TAGGGTTTTAAGGTTATTTA+GGG | - | chr7_1:45871079-45871098 | Msa1021470:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTGTTGTTTTTGTG+TGG | - | chr7_1:45871353-45871372 | Msa1021470:exon | 25.0% |
| !! | TGTTGATGTTATTTAGAACT+TGG | - | chr7_1:45871531-45871550 | Msa1021470:CDS | 25.0% |
| ! | CTGTTTATCAAATTAAAGCA+CGG | + | chr7_1:45871917-45871936 | None:intergenic | 25.0% |
| ! | ATTTGATAAACAGTTCAACA+CGG | - | chr7_1:45871924-45871943 | Msa1021470:intron | 25.0% |
| ! | ATTAAGCAATATTGGGAAAT+TGG | - | chr7_1:45872119-45872138 | Msa1021470:CDS | 25.0% |
| ! | AAACAATGCCTATGTTTAAA+AGG | - | chr7_1:45872315-45872334 | Msa1021470:CDS | 25.0% |
| ! | AACAATGCCTATGTTTAAAA+GGG | - | chr7_1:45872316-45872335 | Msa1021470:CDS | 25.0% |
| !! | CATATATCCCTTTTAAACAT+AGG | + | chr7_1:45872326-45872345 | None:intergenic | 25.0% |
| ! | AACTACTAAATCACTTTAAG+GGG | - | chr7_1:45872536-45872555 | Msa1021470:CDS | 25.0% |
| ! | TCTTCTTTACAATAGATACT+AGG | - | chr7_1:45872744-45872763 | Msa1021470:intron | 25.0% |
| ! | CTTCTTTACAATAGATACTA+GGG | - | chr7_1:45872745-45872764 | Msa1021470:intron | 25.0% |
| ! | CATTAAACATGTAAAAGGAA+CGG | + | chr7_1:45873252-45873271 | None:intergenic | 25.0% |
| !!! | ATTTTAATGACAAACTCAAG+TGG | + | chr7_1:45873412-45873431 | None:intergenic | 25.0% |
| ! | CAAAAATAGGTGATAATTTC+AGG | + | chr7_1:45873479-45873498 | None:intergenic | 25.0% |
| ! | AATGATCTTACTGCAAAAAT+AGG | + | chr7_1:45873492-45873511 | None:intergenic | 25.0% |
| ! | AGATCATTCAATACTGTAAT+TGG | - | chr7_1:45873504-45873523 | Msa1021470:intron | 25.0% |
| ! | GAAGGTAACTTGAAAATAAT+TGG | - | chr7_1:45873754-45873773 | Msa1021470:intron | 25.0% |
| ! | AACTTGAAAATAATTGGCAA+TGG | - | chr7_1:45873760-45873779 | Msa1021470:intron | 25.0% |
| ! | ACCTTTAGATTTATTGAAGA+GGG | + | chr7_1:45873806-45873825 | None:intergenic | 25.0% |
| ! | AACCTTTAGATTTATTGAAG+AGG | + | chr7_1:45873807-45873826 | None:intergenic | 25.0% |
| !!! | TCATATTGATTTTCTGTGAT+TGG | - | chr7_1:45873882-45873901 | Msa1021470:intron | 25.0% |
| !!! | TGTTTGAAATTTTAACGTTC+TGG | - | chr7_1:45874022-45874041 | Msa1021470:intron | 25.0% |
| ! | ATTGTTGATATTCAACAACT+TGG | + | chr7_1:45874080-45874099 | None:intergenic | 25.0% |
| !!! | TTATATTTTGAATCCATTCC+TGG | - | chr7_1:45874285-45874304 | Msa1021470:intron | 25.0% |
| ! | GTCTATATGATTTCATGTTT+AGG | - | chr7_1:45874331-45874350 | Msa1021470:intron | 25.0% |
| ! | TCTTATAATGCTGTAAATGA+AGG | - | chr7_1:45874432-45874451 | Msa1021470:intron | 25.0% |
| ! | TCATTATCATCAGATAATAC+GGG | + | chr7_1:45874862-45874881 | None:intergenic | 25.0% |
| !! | CTATACTTTCTTTTCTATTC+TGG | - | chr7_1:45874983-45875002 | Msa1021470:intron | 25.0% |
| !!! | AACTGTTTTTGTATTTGTGA+AGG | - | chr7_1:45875078-45875097 | Msa1021470:intron | 25.0% |
| !! | GTAATTCATTACACCTTTTA+TGG | - | chr7_1:45875783-45875802 | Msa1021470:exon | 25.0% |
| ! | TACAGATAAAAATATGGTGT+TGG | + | chr7_1:45875812-45875831 | None:intergenic | 25.0% |
| !!! | ACCATATTTTTATCTGTATC+TGG | - | chr7_1:45875814-45875833 | Msa1021470:five_prime_UTR | 25.0% |
| ! | ACCAGATACAGATAAAAATA+TGG | + | chr7_1:45875818-45875837 | None:intergenic | 25.0% |
| GGAGAGAAATTAATTGGAAA+GGG | + | chr7_1:45871048-45871067 | None:intergenic | 30.0% | |
| TTAAAACCCTAGAAAAGGAA+GGG | + | chr7_1:45871070-45871089 | None:intergenic | 30.0% | |
| TAACCTTAAAACCCTAGAAA+AGG | + | chr7_1:45871075-45871094 | None:intergenic | 30.0% | |
| !!! | CTAGGGTTTTAAGGTTATTT+AGG | - | chr7_1:45871078-45871097 | Msa1021470:three_prime_UTR | 30.0% |
| ! | ATTCACCATGTTTTCGTTTT+TGG | - | chr7_1:45871311-45871330 | Msa1021470:three_prime_UTR | 30.0% |
| !! | TTCACCATGTTTTCGTTTTT+GGG | - | chr7_1:45871312-45871331 | Msa1021470:three_prime_UTR | 30.0% |
| !! | GTGGCATTTTAAGAAATGTT+TGG | - | chr7_1:45871372-45871391 | Msa1021470:CDS | 30.0% |
| ! | TGTTATTTAGAACTTGGTAG+TGG | - | chr7_1:45871537-45871556 | Msa1021470:CDS | 30.0% |
| ! | CTGTTTGTTGAAATGATTGT+AGG | - | chr7_1:45871569-45871588 | Msa1021470:CDS | 30.0% |
| ! | CCATTTTCCCAAATTTTTAC+CGG | - | chr7_1:45871763-45871782 | Msa1021470:CDS | 30.0% |
| !!! | TAACTTTTTGGAATCTACTC+CGG | - | chr7_1:45871856-45871875 | Msa1021470:intron | 30.0% |
| TCATACTAAACGCAATAATG+TGG | - | chr7_1:45871950-45871969 | Msa1021470:intron | 30.0% | |
| GAATGTATCAGATTAAAGCA+TGG | - | chr7_1:45872066-45872085 | Msa1021470:intron | 30.0% | |
| !!! | GAAGTTTTGGTTCTCAAATA+TGG | - | chr7_1:45872238-45872257 | Msa1021470:intron | 30.0% |
| ATACGAAGTTACAAACCTAA+TGG | - | chr7_1:45872269-45872288 | Msa1021470:CDS | 30.0% | |
| ATTGTAAAGAAGACTAACAG+AGG | + | chr7_1:45872737-45872756 | None:intergenic | 30.0% | |
| ! | AAAAGTTTTTACTCTTGCGT+TGG | - | chr7_1:45872869-45872888 | Msa1021470:intron | 30.0% |
| AAATGGTTATGGGAGTTTAT+TGG | + | chr7_1:45872964-45872983 | None:intergenic | 30.0% | |
| AATAAACTCCCATAACCATT+TGG | - | chr7_1:45872963-45872982 | Msa1021470:CDS | 30.0% | |
| CTGAATTACCAAATGGTTAT+GGG | + | chr7_1:45872974-45872993 | None:intergenic | 30.0% | |
| ACTGAATTACCAAATGGTTA+TGG | + | chr7_1:45872975-45872994 | None:intergenic | 30.0% | |
| ! | TAACCATTTGGTAATTCAGT+AGG | - | chr7_1:45872975-45872994 | Msa1021470:CDS | 30.0% |
| TATCCTACTGAATTACCAAA+TGG | + | chr7_1:45872981-45873000 | None:intergenic | 30.0% | |
| TTCAGGTAAATGAAATAGGA+GGG | + | chr7_1:45873462-45873481 | None:intergenic | 30.0% | |
| ! | TTTCAGGTAAATGAAATAGG+AGG | + | chr7_1:45873463-45873482 | None:intergenic | 30.0% |
| ! | TAACGTTTTGTATTTCATCC+AGG | - | chr7_1:45873564-45873583 | Msa1021470:intron | 30.0% |
| TCCCTCTTCAATAAATCTAA+AGG | - | chr7_1:45873802-45873821 | Msa1021470:intron | 30.0% | |
| TATCAACAATTATTGCAGTG+TGG | - | chr7_1:45874090-45874109 | Msa1021470:intron | 30.0% | |
| AATTGAACACAAATTCTCCT+GGG | - | chr7_1:45874161-45874180 | Msa1021470:intron | 30.0% | |
| ! | TTACGTTCCTTTTATTCAGT+TGG | - | chr7_1:45874214-45874233 | Msa1021470:intron | 30.0% |
| AAATGGTCCAACTGAATAAA+AGG | + | chr7_1:45874224-45874243 | None:intergenic | 30.0% | |
| GAAGCTGTTATAACAAGAAA+TGG | + | chr7_1:45874241-45874260 | None:intergenic | 30.0% | |
| ! | TTCTTGTTATAACAGCTTCT+TGG | - | chr7_1:45874242-45874261 | Msa1021470:intron | 30.0% |
| ! | TCTTGTTATAACAGCTTCTT+GGG | - | chr7_1:45874243-45874262 | Msa1021470:intron | 30.0% |
| AAATACTAGTCAAACAATCC+AGG | + | chr7_1:45874306-45874325 | None:intergenic | 30.0% | |
| AGATGTGCTAAAAGTTAGAA+TGG | + | chr7_1:45874498-45874517 | None:intergenic | 30.0% | |
| ! | TATCTTTTTCTAGACTCGTA+TGG | - | chr7_1:45874520-45874539 | Msa1021470:intron | 30.0% |
| ! | GATAATTTGCATATCCACTT+TGG | + | chr7_1:45874648-45874667 | None:intergenic | 30.0% |
| AGTGGATATGCAAATTATCA+AGG | - | chr7_1:45874649-45874668 | Msa1021470:intron | 30.0% | |
| GTACTATAATGCTAAAATCC+AGG | + | chr7_1:45874689-45874708 | None:intergenic | 30.0% | |
| !! | AAGTTTACTTTTGTTGTGCT+TGG | - | chr7_1:45874735-45874754 | Msa1021470:intron | 30.0% |
| ! | TGATGATAATGAATGTCTTC+AGG | - | chr7_1:45874870-45874889 | Msa1021470:intron | 30.0% |
| ! | TACTTTCTTTTCTATTCTGG+AGG | - | chr7_1:45874986-45875005 | Msa1021470:intron | 30.0% |
| ! | AGTTTTCCATATTTGATTGC+TGG | + | chr7_1:45875062-45875081 | None:intergenic | 30.0% |
| GCTTATGATCAGATTAAACA+TGG | + | chr7_1:45875108-45875127 | None:intergenic | 30.0% | |
| !!! | TCACATTTTTAAGGTGGTTA+CGG | - | chr7_1:45875143-45875162 | Msa1021470:intron | 30.0% |
| TTCTCTTCATGAAACTGATT+TGG | - | chr7_1:45875700-45875719 | Msa1021470:CDS | 30.0% | |
| ! | TCTCTTCATGAAACTGATTT+GGG | - | chr7_1:45875701-45875720 | Msa1021470:CDS | 30.0% |
| TGTTCATCTTTAGATTTAGC+TGG | - | chr7_1:45875732-45875751 | Msa1021470:CDS | 30.0% | |
| ! | ATCTGTATCTGGTTTCTATA+TGG | - | chr7_1:45875825-45875844 | Msa1021470:five_prime_UTR | 30.0% |
| GGGAGAGAAATTAATTGGAA+AGG | + | chr7_1:45871049-45871068 | None:intergenic | 35.0% | |
| TAAAACCCTAGAAAAGGAAG+GGG | + | chr7_1:45871069-45871088 | None:intergenic | 35.0% | |
| CTTAAAACCCTAGAAAAGGA+AGG | + | chr7_1:45871071-45871090 | None:intergenic | 35.0% | |
| !!! | CTTCCTTTTCTAGGGTTTTA+AGG | - | chr7_1:45871069-45871088 | Msa1021470:three_prime_UTR | 35.0% |
| GTAAGTGATGTAGTTACGAA+TGG | + | chr7_1:45871234-45871253 | None:intergenic | 35.0% | |
| TTGAATCTTGTCAGCATTTC+TGG | - | chr7_1:45871656-45871675 | Msa1021470:CDS | 35.0% | |
| CCGGTAAAAATTTGGGAAAA+TGG | + | chr7_1:45871766-45871785 | None:intergenic | 35.0% | |
| GTCAACACCGGTAAAAATTT+GGG | + | chr7_1:45871773-45871792 | None:intergenic | 35.0% | |
| ! | TACTCCGGTTTCGTTTATTT+TGG | - | chr7_1:45871871-45871890 | Msa1021470:intron | 35.0% |
| !! | ACTCCGGTTTCGTTTATTTT+GGG | - | chr7_1:45871872-45871891 | Msa1021470:intron | 35.0% |
| TACCCCAAAATAAACGAAAC+CGG | + | chr7_1:45871878-45871897 | None:intergenic | 35.0% | |
| ACTAAACGCAATAATGTGGA+TGG | - | chr7_1:45871954-45871973 | Msa1021470:intron | 35.0% | |
| ATCTGATACACAGTTCAACA+TGG | + | chr7_1:45872037-45872056 | None:intergenic | 35.0% | |
| CTGTGTATCAGATTAAACCA+CGG | - | chr7_1:45872044-45872063 | Msa1021470:intron | 35.0% | |
| CTTTAATCTGATACATTCCG+TGG | + | chr7_1:45872064-45872083 | None:intergenic | 35.0% | |
| ! | AAGGAGGTAAAAAGGTACAA+GGG | + | chr7_1:45872426-45872445 | None:intergenic | 35.0% |
| ! | AAAGGAGGTAAAAAGGTACA+AGG | + | chr7_1:45872427-45872446 | None:intergenic | 35.0% |
| ATACTACAACACAGAAGGAA+AGG | + | chr7_1:45872445-45872464 | None:intergenic | 35.0% | |
| !! | TTGTAGTATGTGTGTTGGTT+AGG | - | chr7_1:45872456-45872475 | Msa1021470:intron | 35.0% |
| !! | TGTAGTATGTGTGTTGGTTA+GGG | - | chr7_1:45872457-45872476 | Msa1021470:intron | 35.0% |
| ! | GGTTAGGGTTTTCTTTAGTT+AGG | - | chr7_1:45872472-45872491 | Msa1021470:intron | 35.0% |
| ! | ACTAAATCACTTTAAGGGGT+TGG | - | chr7_1:45872540-45872559 | Msa1021470:CDS | 35.0% |
| GTACAAATGGAGGTTCAATT+AGG | + | chr7_1:45872710-45872729 | None:intergenic | 35.0% | |
| AATTGAACCTCCATTTGTAC+TGG | - | chr7_1:45872710-45872729 | Msa1021470:intron | 35.0% | |
| ATTGAACCTCCATTTGTACT+GGG | - | chr7_1:45872711-45872730 | Msa1021470:intron | 35.0% | |
| AGCAAAAGAGATTGTCTTGA+AGG | - | chr7_1:45873594-45873613 | Msa1021470:intron | 35.0% | |
| !! | TAGCATATGTTTCTGGTAGA+AGG | - | chr7_1:45873736-45873755 | Msa1021470:intron | 35.0% |
| TCAATCTGCTTAAACAGAAG+AGG | - | chr7_1:45873908-45873927 | Msa1021470:intron | 35.0% | |
| AGTTAGCATAACAGATGTGT+GGG | - | chr7_1:45873966-45873985 | Msa1021470:intron | 35.0% | |
| GAATTGAACACAAATTCTCC+TGG | - | chr7_1:45874160-45874179 | Msa1021470:intron | 35.0% | |
| ! | CTTGTTATAACAGCTTCTTG+GGG | - | chr7_1:45874244-45874263 | Msa1021470:intron | 35.0% |
| TTTGATTGTTCAGCAGTAGA+TGG | + | chr7_1:45874366-45874385 | None:intergenic | 35.0% | |
| AAGGTACAAATTCTGAATCC+TGG | - | chr7_1:45874668-45874687 | Msa1021470:intron | 35.0% | |
| TTATCATCAGATAATACGGG+AGG | + | chr7_1:45874859-45874878 | None:intergenic | 35.0% | |
| ATAAACTCAGGAAACCATCT+CGG | + | chr7_1:45874913-45874932 | None:intergenic | 35.0% | |
| TATGCTCCAGCAATCAAATA+TGG | - | chr7_1:45875053-45875072 | Msa1021470:intron | 35.0% | |
| TAACATAACTGCACTGTCAA+GGG | + | chr7_1:45875622-45875641 | None:intergenic | 35.0% | |
| ATAACATAACTGCACTGTCA+AGG | + | chr7_1:45875623-45875642 | None:intergenic | 35.0% | |
| TGATAGTATGATGTTGCTCA+TGG | - | chr7_1:45875656-45875675 | Msa1021470:intron | 35.0% | |
| !! | TTAGCTGGAAAAAGCATCTT+TGG | - | chr7_1:45875747-45875766 | Msa1021470:CDS | 35.0% |
| ! | GTTTTGTGTACACTAGAAAG+TGG | - | chr7_1:45875920-45875939 | Msa1021470:five_prime_UTR | 35.0% |
| AAGAAAAGAGAGTGAGAGTG+AGG | - | chr7_1:45871005-45871024 | Msa1021470:three_prime_UTR | 40.0% | |
| GGAAGGGGAGAGAAATTAAT+TGG | + | chr7_1:45871054-45871073 | None:intergenic | 40.0% | |
| GAGAGAAGGGGAAAATGAAA+TGG | + | chr7_1:45871107-45871126 | None:intergenic | 40.0% | |
| AGAAAGAGGTAGAGAGAGAA+GGG | + | chr7_1:45871120-45871139 | None:intergenic | 40.0% | |
| !! | GTTTGGGTTTTTCAACCTTC+TGG | + | chr7_1:45871163-45871182 | None:intergenic | 40.0% |
| !! | TTGATGGGAGTTTCAGGTTT+GGG | + | chr7_1:45871179-45871198 | None:intergenic | 40.0% |
| !! | TTTTCGTTGATGGGAGTTTC+AGG | + | chr7_1:45871185-45871204 | None:intergenic | 40.0% |
| ! | CGGATCTCATTTTCGTTGAT+GGG | + | chr7_1:45871194-45871213 | None:intergenic | 40.0% |
| ! | ACGGATCTCATTTTCGTTGA+TGG | + | chr7_1:45871195-45871214 | None:intergenic | 40.0% |
| GCAACCCAAAAACGAAAACA+TGG | + | chr7_1:45871319-45871338 | None:intergenic | 40.0% | |
| !!! | TTTTTGGGTTGCGTTGATTG+TGG | - | chr7_1:45871327-45871346 | Msa1021470:three_prime_UTR | 40.0% |
| CGTCAACACCGGTAAAAATT+TGG | + | chr7_1:45871774-45871793 | None:intergenic | 40.0% | |
| AAAACACTGACACAGATACC+AGG | + | chr7_1:45871812-45871831 | None:intergenic | 40.0% | |
| TGTAAGTCGTATGTCTGTTC+TGG | - | chr7_1:45871831-45871850 | Msa1021470:intron | 40.0% | |
| GTAAGTCGTATGTCTGTTCT+GGG | - | chr7_1:45871832-45871851 | Msa1021470:intron | 40.0% | |
| TAAGTCGTATGTCTGTTCTG+GGG | - | chr7_1:45871833-45871852 | Msa1021470:intron | 40.0% | |
| !!! | TCTGTTCTGGGGTAACTTTT+TGG | - | chr7_1:45871844-45871863 | Msa1021470:intron | 40.0% |
| !!! | CTCCGGTTTCGTTTATTTTG+GGG | - | chr7_1:45871873-45871892 | Msa1021470:intron | 40.0% |
| GGATGGAGATGAACATTGTT+AGG | - | chr7_1:45871971-45871990 | Msa1021470:intron | 40.0% | |
| CAGAAGGAAAGGAGGTAAAA+AGG | + | chr7_1:45872434-45872453 | None:intergenic | 40.0% | |
| CACACATACTACAACACAGA+AGG | + | chr7_1:45872450-45872469 | None:intergenic | 40.0% | |
| CTGTGTTGTAGTATGTGTGT+TGG | - | chr7_1:45872451-45872470 | Msa1021470:intron | 40.0% | |
| CTTAGCTACAGTACCTTACA+CGG | - | chr7_1:45872773-45872792 | Msa1021470:CDS | 40.0% | |
| AGTACCTTACACGGTTCAAA+CGG | - | chr7_1:45872782-45872801 | Msa1021470:CDS | 40.0% | |
| ! | GATTCTGTCATTTGACGATG+AGG | - | chr7_1:45872900-45872919 | Msa1021470:intron | 40.0% |
| AGAGCTACAAAAGAATGGCA+TGG | + | chr7_1:45873020-45873039 | None:intergenic | 40.0% | |
| GCTGAAGAGCTACAAAAGAA+TGG | + | chr7_1:45873025-45873044 | None:intergenic | 40.0% | |
| TAGGAGGGACAAAATGTGAT+CGG | + | chr7_1:45873447-45873466 | None:intergenic | 40.0% | |
| ATACTGTAATTGGCACGTGT+TGG | - | chr7_1:45873514-45873533 | Msa1021470:intron | 40.0% | |
| CACGTGTTGGAAACTATTTC+TGG | - | chr7_1:45873527-45873546 | Msa1021470:intron | 40.0% | |
| !! | TCTCTTTTGCTTGCTTTTCC+TGG | + | chr7_1:45873585-45873604 | None:intergenic | 40.0% |
| AGAGATTGTCTTGAAGGCAA+TGG | - | chr7_1:45873600-45873619 | Msa1021470:intron | 40.0% | |
| GAGATTGTCTTGAAGGCAAT+GGG | - | chr7_1:45873601-45873620 | Msa1021470:intron | 40.0% | |
| TACCTTCAGAATCTCTGCAA+TGG | + | chr7_1:45873650-45873669 | None:intergenic | 40.0% | |
| GACAGTCTAGCATATGTTTC+TGG | - | chr7_1:45873729-45873748 | Msa1021470:intron | 40.0% | |
| ! | TTGCAGTATCTTGGTGCAAA+GGG | + | chr7_1:45873939-45873958 | None:intergenic | 40.0% |
| ! | ATTGCAGTATCTTGGTGCAA+AGG | + | chr7_1:45873940-45873959 | None:intergenic | 40.0% |
| CAGTTAGCATAACAGATGTG+TGG | - | chr7_1:45873965-45873984 | Msa1021470:intron | 40.0% | |
| ATTGCAGTGTGGAAATGACT+CGG | - | chr7_1:45874101-45874120 | Msa1021470:intron | 40.0% | |
| TGACAAGGTGATTGAGATCA+TGG | + | chr7_1:45874134-45874153 | None:intergenic | 40.0% | |
| ATCTCAATCACCTTGTCAAC+TGG | - | chr7_1:45874136-45874155 | Msa1021470:intron | 40.0% | |
| GTTCAATTCTCCAGTTGACA+AGG | + | chr7_1:45874149-45874168 | None:intergenic | 40.0% | |
| TTATAACAGCTTCTTGGGGA+GGG | - | chr7_1:45874248-45874267 | Msa1021470:intron | 40.0% | |
| TGGGGAGGGAAAAAAATTGA+AGG | - | chr7_1:45874262-45874281 | Msa1021470:intron | 40.0% | |
| CTAGTCAAACAATCCAGGAA+TGG | + | chr7_1:45874301-45874320 | None:intergenic | 40.0% | |
| GCATTATAAGAATCCTGTGC+TGG | + | chr7_1:45874423-45874442 | None:intergenic | 40.0% | |
| GGAAATTACCAAGGTGGATA+CGG | - | chr7_1:45874616-45874635 | Msa1021470:intron | 40.0% | |
| AATACCCACCATTATCTGTC+AGG | + | chr7_1:45874763-45874782 | None:intergenic | 40.0% | |
| !! | AATGGTGGGTATTCTAATCG+CGG | - | chr7_1:45874770-45874789 | Msa1021470:intron | 40.0% |
| !! | TTCTGTCTTTTTCACCGAGA+TGG | - | chr7_1:45874896-45874915 | Msa1021470:intron | 40.0% |
| !!! | CATTTTTAAGGTGGTTACGG+TGG | - | chr7_1:45875146-45875165 | Msa1021470:intron | 40.0% |
| ! | TATGGGTTATGAAAGAGGCA+GGG | - | chr7_1:45875484-45875503 | Msa1021470:intron | 40.0% |
| AAAACCAGGCATGATAGCAA+TGG | - | chr7_1:45875567-45875586 | Msa1021470:intron | 40.0% | |
| AAACCAGGCATGATAGCAAT+GGG | - | chr7_1:45875568-45875587 | Msa1021470:intron | 40.0% | |
| !! | TCATGAAACTGATTTGGGCA+AGG | - | chr7_1:45875706-45875725 | Msa1021470:CDS | 40.0% |
| !! | ATGGTGTTGGCAACCATAAA+AGG | + | chr7_1:45875799-45875818 | None:intergenic | 40.0% |
| ! | GAGAGTGAGAGTGAGGTTTT+AGG | - | chr7_1:45871012-45871031 | Msa1021470:three_prime_UTR | 45.0% |
| ! | TTCTCTCCCCTTCCTTTTCT+AGG | - | chr7_1:45871060-45871079 | Msa1021470:three_prime_UTR | 45.0% |
| ! | TCTCTCCCCTTCCTTTTCTA+GGG | - | chr7_1:45871061-45871080 | Msa1021470:three_prime_UTR | 45.0% |
| GAAAGAGGTAGAGAGAGAAG+GGG | + | chr7_1:45871119-45871138 | None:intergenic | 45.0% | |
| GAGAAAGAGGTAGAGAGAGA+AGG | + | chr7_1:45871121-45871140 | None:intergenic | 45.0% | |
| !! | GTTGATGGGAGTTTCAGGTT+TGG | + | chr7_1:45871180-45871199 | None:intergenic | 45.0% |
| GAGATCCGTATCACTACTCA+AGG | - | chr7_1:45871206-45871225 | Msa1021470:three_prime_UTR | 45.0% | |
| ATTGACCTGAAGAAGCGAAG+TGG | + | chr7_1:45871258-45871277 | None:intergenic | 45.0% | |
| ! | AGCACCGGAACTTCTTATGA+AGG | - | chr7_1:45871705-45871724 | Msa1021470:CDS | 45.0% |
| CACGCCTTCATAAGAAGTTC+CGG | + | chr7_1:45871712-45871731 | None:intergenic | 45.0% | |
| ! | GGTAAAAAGGTACAAGGGTG+TGG | + | chr7_1:45872421-45872440 | None:intergenic | 45.0% |
| CTACAACACAGAAGGAAAGG+AGG | + | chr7_1:45872442-45872461 | None:intergenic | 45.0% | |
| TAACAGAGGCCCAGTACAAA+TGG | + | chr7_1:45872723-45872742 | None:intergenic | 45.0% | |
| AGAACCGTTTGAACCGTGTA+AGG | + | chr7_1:45872789-45872808 | None:intergenic | 45.0% | |
| TGCCATTGCAGAGATTCTGA+AGG | - | chr7_1:45873645-45873664 | Msa1021470:intron | 45.0% | |
| ! | TGCAGTATCTTGGTGCAAAG+GGG | + | chr7_1:45873938-45873957 | None:intergenic | 45.0% |
| CTGAGCTGATTGCAGTATCT+TGG | + | chr7_1:45873948-45873967 | None:intergenic | 45.0% | |
| GGTACAAGACCCTCTTCAAT+GGG | + | chr7_1:45873994-45874013 | None:intergenic | 45.0% | |
| AATAGTTACGGAACTCACCC+AGG | + | chr7_1:45874181-45874200 | None:intergenic | 45.0% | |
| GTTATAACAGCTTCTTGGGG+AGG | - | chr7_1:45874247-45874266 | Msa1021470:intron | 45.0% | |
| TGCTGCTGATAATTGGAGTG+TGG | + | chr7_1:45874390-45874409 | None:intergenic | 45.0% | |
| CAGAGGTTGCTGCTGATAAT+TGG | + | chr7_1:45874397-45874416 | None:intergenic | 45.0% | |
| TAGAGGGAGAGGTAGGAATT+GGG | - | chr7_1:45874561-45874580 | Msa1021470:intron | 45.0% | |
| GTGGTTATGGCTATCAAGGT+GGG | - | chr7_1:45874590-45874609 | Msa1021470:intron | 45.0% | |
| TATGGCTATCAAGGTGGGTA+TGG | - | chr7_1:45874595-45874614 | Msa1021470:intron | 45.0% | |
| GGTGGGTATGGAAATTACCA+AGG | - | chr7_1:45874607-45874626 | Msa1021470:intron | 45.0% | |
| GGGTATGGAAATTACCAAGG+TGG | - | chr7_1:45874610-45874629 | Msa1021470:intron | 45.0% | |
| GGATACGGCTATTACCAAAG+TGG | - | chr7_1:45874631-45874650 | Msa1021470:intron | 45.0% | |
| GCTTGGTTCCTGACAGATAA+TGG | - | chr7_1:45874752-45874771 | Msa1021470:intron | 45.0% | |
| ! | TGGTTCCTGACAGATAATGG+TGG | - | chr7_1:45874755-45874774 | Msa1021470:intron | 45.0% |
| ! | GGTTCCTGACAGATAATGGT+GGG | - | chr7_1:45874756-45874775 | Msa1021470:intron | 45.0% |
| ! | CCAGATGAGAGCATAAACTC+AGG | + | chr7_1:45874925-45874944 | None:intergenic | 45.0% |
| CCTGAGTTTATGCTCTCATC+TGG | - | chr7_1:45874922-45874941 | Msa1021470:intron | 45.0% | |
| !!! | TTTTAAGGTGGTTACGGTGG+CGG | - | chr7_1:45875149-45875168 | Msa1021470:intron | 45.0% |
| ! | GGAGGTATGGGTTATGAAAG+AGG | - | chr7_1:45875479-45875498 | Msa1021470:intron | 45.0% |
| ! | GTATGGGTTATGAAAGAGGC+AGG | - | chr7_1:45875483-45875502 | Msa1021470:intron | 45.0% |
| ! | ATGGGTTATGAAAGAGGCAG+GGG | - | chr7_1:45875485-45875504 | Msa1021470:intron | 45.0% |
| ACCTCTTTCTCTCTCTGCCA+TGG | - | chr7_1:45871130-45871149 | Msa1021470:three_prime_UTR | 50.0% | |
| TCCATGGCAGAGAGAGAAAG+AGG | + | chr7_1:45871134-45871153 | None:intergenic | 50.0% | |
| TTTCTCTCTCTGCCATGGAC+AGG | - | chr7_1:45871135-45871154 | Msa1021470:three_prime_UTR | 50.0% | |
| AACCTTCTGGTACCTGTCCA+TGG | + | chr7_1:45871150-45871169 | None:intergenic | 50.0% | |
| TGGCGCCTTGAGTAGTGATA+CGG | + | chr7_1:45871214-45871233 | None:intergenic | 50.0% | |
| TTACGCCACTTCGCTTCTTC+AGG | - | chr7_1:45871250-45871269 | Msa1021470:three_prime_UTR | 50.0% | |
| TGTTGCATGCTCTGTAGCAC+CGG | - | chr7_1:45871690-45871709 | Msa1021470:CDS | 50.0% | |
| CAACACTGACACGTCAACAC+CGG | + | chr7_1:45871785-45871804 | None:intergenic | 50.0% | |
| CGGTACAAGACCCTCTTCAA+TGG | + | chr7_1:45873995-45874014 | None:intergenic | 50.0% | |
| !! | GAATCCTGTGCTGGTTTCAG+AGG | + | chr7_1:45874414-45874433 | None:intergenic | 50.0% |
| TTTCTAGACTCGTATGGCCG+AGG | - | chr7_1:45874526-45874545 | Msa1021470:intron | 50.0% | |
| GTAGAGGGAGAGGTAGGAAT+TGG | - | chr7_1:45874560-45874579 | Msa1021470:intron | 50.0% | |
| AGAGGGAGAGGTAGGAATTG+GGG | - | chr7_1:45874562-45874581 | Msa1021470:intron | 50.0% | |
| GAGAGGTAGGAATTGGGGAA+GGG | - | chr7_1:45874567-45874586 | Msa1021470:intron | 50.0% | |
| AGAGGTAGGAATTGGGGAAG+GGG | - | chr7_1:45874568-45874587 | Msa1021470:intron | 50.0% | |
| AATTGGGGAAGGGGTGGTTA+TGG | - | chr7_1:45874577-45874596 | Msa1021470:intron | 50.0% | |
| AGGGGTGGTTATGGCTATCA+AGG | - | chr7_1:45874586-45874605 | Msa1021470:intron | 50.0% | |
| GGTGGTTATGGCTATCAAGG+TGG | - | chr7_1:45874589-45874608 | Msa1021470:intron | 50.0% | |
| GGTAATAGCCGTATCCACCT+TGG | + | chr7_1:45874627-45874646 | None:intergenic | 50.0% | |
| AGAGGTGGAGGTTATGAAGG+TGG | - | chr7_1:45875173-45875192 | Msa1021470:intron | 50.0% | |
| GGAGGTTATGAAGGTGGTAG+AGG | - | chr7_1:45875179-45875198 | Msa1021470:intron | 50.0% | |
| GGTTATGAAGGTGGTAGAGG+TGG | - | chr7_1:45875182-45875201 | Msa1021470:intron | 50.0% | |
| TATGAAGGTGGTAGAGGTGG+AGG | - | chr7_1:45875185-45875204 | Msa1021470:intron | 50.0% | |
| AGAGGTGGAGGTGGTTATGA+AGG | - | chr7_1:45875197-45875216 | Msa1021470:intron | 50.0% | |
| TGGAGGTTATGAAGGTGGCA+GGG | - | chr7_1:45875250-45875269 | Msa1021470:intron | 50.0% | |
| ! | AGAGGTGGTGGTTATGAAGG+AGG | - | chr7_1:45875362-45875381 | Msa1021470:intron | 50.0% |
| AGAGGTGGAGGTTATGAAGG+AGG | - | chr7_1:45875173-45875192 | Msa1021470:intron | 50.0% | |
| !! | GGTGGAGGAATGGGTTATGT+AGG | - | chr7_1:45875413-45875432 | Msa1021470:intron | 50.0% |
| !! | GGAGGAATGGGTTATGTAGG+AGG | - | chr7_1:45875416-45875435 | Msa1021470:intron | 50.0% |
| ! | ATGGGTTATGTAGGAGGCAG+AGG | - | chr7_1:45875422-45875441 | Msa1021470:intron | 50.0% |
| CATCCATTCTTCCCCTACCA+CGG | + | chr7_1:45875526-45875545 | None:intergenic | 50.0% | |
| TGGTAGAGGTGGAGAAAACC+AGG | - | chr7_1:45875553-45875572 | Msa1021470:intron | 50.0% | |
| ACACCCATTGCTATCATGCC+TGG | + | chr7_1:45875574-45875593 | None:intergenic | 50.0% | |
| TGCCATGGACAGGTACCAGA+AGG | - | chr7_1:45871145-45871164 | Msa1021470:three_prime_UTR | 55.0% | |
| ACGTGTCAGTGTTGTGTGCC+TGG | - | chr7_1:45871791-45871810 | Msa1021470:intron | 55.0% | |
| CAGAGGCCCAGTACAAATGG+AGG | + | chr7_1:45872720-45872739 | None:intergenic | 55.0% | |
| TGTGTGGGAGCCCATTGAAG+AGG | - | chr7_1:45873981-45874000 | Msa1021470:intron | 55.0% | |
| GTGTGGGAGCCCATTGAAGA+GGG | - | chr7_1:45873982-45874001 | Msa1021470:intron | 55.0% | |
| !! | GCAACCTCTGAAACCAGCAC+AGG | - | chr7_1:45874407-45874426 | Msa1021470:intron | 55.0% |
| GGAGAGGTAGGAATTGGGGA+AGG | - | chr7_1:45874566-45874585 | Msa1021470:intron | 55.0% | |
| GGTATTCTAATCGCGGCCGA+GGG | - | chr7_1:45874777-45874796 | Msa1021470:intron | 55.0% | |
| GTATTCTAATCGCGGCCGAG+GGG | - | chr7_1:45874778-45874797 | Msa1021470:intron | 55.0% | |
| TATTCTAATCGCGGCCGAGG+GGG | - | chr7_1:45874779-45874798 | Msa1021470:intron | 55.0% | |
| GGCAGAGGTGGAGGTTATGA+AGG | - | chr7_1:45875170-45875189 | Msa1021470:intron | 55.0% | |
| GGTGGAGGTGGTTATGAAGG+TGG | - | chr7_1:45875200-45875219 | Msa1021470:intron | 55.0% | |
| GGTGGTTATGAAGGTGGCAG+AGG | - | chr7_1:45875206-45875225 | Msa1021470:intron | 55.0% | |
| GGTTATGAAGGTGGCAGAGG+TGG | - | chr7_1:45875209-45875228 | Msa1021470:intron | 55.0% | |
| TATGAAGGTGGTCGTGGTGG+AGG | - | chr7_1:45875233-45875252 | Msa1021470:intron | 55.0% | |
| ! | GGTCGTGGTGGAGGTTATGA+AGG | - | chr7_1:45875242-45875261 | Msa1021470:intron | 55.0% |
| ! | CGTGGTGGAGGTTATGAAGG+TGG | - | chr7_1:45875245-45875264 | Msa1021470:intron | 55.0% |
| GTGGAGGTTATGAAGGTGGC+AGG | - | chr7_1:45875249-45875268 | Msa1021470:intron | 55.0% | |
| GGAGGTTATGAAGGTGGCAG+GGG | - | chr7_1:45875251-45875270 | Msa1021470:intron | 55.0% | |
| GTTATGGAGGCAGAGGTGGA+GGG | - | chr7_1:45875279-45875298 | Msa1021470:intron | 55.0% | |
| AGAGGTGGAGGATATGGAGG+AGG | - | chr7_1:45875338-45875357 | Msa1021470:intron | 55.0% | |
| ! | GGCAGAGGTGGTGGTTATGA+AGG | - | chr7_1:45875359-45875378 | Msa1021470:intron | 55.0% |
| GGTGGTTATGAAGGAGGCAG+AGG | - | chr7_1:45875368-45875387 | Msa1021470:intron | 55.0% | |
| GGTTATGAAGGAGGCAGAGG+TGG | - | chr7_1:45875371-45875390 | Msa1021470:intron | 55.0% | |
| TATGAAGGAGGCAGAGGTGG+AGG | - | chr7_1:45875374-45875393 | Msa1021470:intron | 55.0% | |
| GGCAGAGGTGGAGGTTATGA+AGG | - | chr7_1:45875170-45875189 | Msa1021470:intron | 55.0% | |
| GGAGGTTATGAAGGAGGCAG+AGG | - | chr7_1:45875392-45875411 | Msa1021470:intron | 55.0% | |
| GGTTATGAAGGAGGCAGAGG+TGG | - | chr7_1:45875371-45875390 | Msa1021470:intron | 55.0% | |
| TATGAAGGAGGCAGAGGTGG+AGG | - | chr7_1:45875374-45875393 | Msa1021470:intron | 55.0% | |
| GGTTATGTAGGAGGCAGAGG+TGG | - | chr7_1:45875425-45875444 | Msa1021470:intron | 55.0% | |
| TATGTAGGAGGCAGAGGTGG+AGG | - | chr7_1:45875428-45875447 | Msa1021470:intron | 55.0% | |
| ! | GGAGGTGGTATGGGTTACGA+AGG | - | chr7_1:45875446-45875465 | Msa1021470:intron | 55.0% |
| ! | GGTGGTATGGGTTACGAAGG+AGG | - | chr7_1:45875449-45875468 | Msa1021470:intron | 55.0% |
| ! | ATGGGTTACGAAGGAGGCAG+AGG | - | chr7_1:45875455-45875474 | Msa1021470:intron | 55.0% |
| GGTTATGAAAGAGGCAGGGG+AGG | - | chr7_1:45875488-45875507 | Msa1021470:intron | 55.0% | |
| CGTGGTAGGGGAAGAATGGA+TGG | - | chr7_1:45875524-45875543 | Msa1021470:intron | 55.0% | |
| AGGGGAAGAATGGATGGACG+TGG | - | chr7_1:45875530-45875549 | Msa1021470:intron | 55.0% | |
| GGAAGAATGGATGGACGTGG+TGG | - | chr7_1:45875533-45875552 | Msa1021470:intron | 55.0% | |
| ATGGATGGACGTGGTGGTAG+AGG | - | chr7_1:45875539-45875558 | Msa1021470:intron | 55.0% | |
| CTCTACCTCGACCACGACCT+CGG | + | chr7_1:45874546-45874565 | None:intergenic | 60.0% | |
| GAGGTCGTGGTCGAGGTAGA+GGG | - | chr7_1:45874545-45874564 | Msa1021470:intron | 60.0% | |
| GTCGAGGTAGAGGGAGAGGT+AGG | - | chr7_1:45874554-45874573 | Msa1021470:intron | 60.0% | |
| GGTAGGAATTGGGGAAGGGG+TGG | - | chr7_1:45874571-45874590 | Msa1021470:intron | 60.0% | |
| GGGTATTCTAATCGCGGCCG+AGG | - | chr7_1:45874776-45874795 | Msa1021470:intron | 60.0% | |
| GAAGGTGGTAGAGGTGGAGG+TGG | - | chr7_1:45875188-45875207 | Msa1021470:intron | 60.0% | |
| GGTGGCAGAGGTGGCTATGA+AGG | - | chr7_1:45875218-45875237 | Msa1021470:intron | 60.0% | |
| GGCAGAGGTGGCTATGAAGG+TGG | - | chr7_1:45875221-45875240 | Msa1021470:intron | 60.0% | |
| GGTGGCTATGAAGGTGGTCG+TGG | - | chr7_1:45875227-45875246 | Msa1021470:intron | 60.0% | |
| GGCTATGAAGGTGGTCGTGG+TGG | - | chr7_1:45875230-45875249 | Msa1021470:intron | 60.0% | |
| GGTTATGAAGGTGGCAGGGG+TGG | - | chr7_1:45875254-45875273 | Msa1021470:intron | 60.0% | |
| TATGAAGGTGGCAGGGGTGG+AGG | - | chr7_1:45875257-45875276 | Msa1021470:intron | 60.0% | |
| GGTGGAGGTTATGGAGGCAG+AGG | - | chr7_1:45875272-45875291 | Msa1021470:intron | 60.0% | |
| GGAGGTTATGGAGGCAGAGG+TGG | - | chr7_1:45875275-45875294 | Msa1021470:intron | 60.0% | |
| GGTTATGGAGGCAGAGGTGG+AGG | - | chr7_1:45875278-45875297 | Msa1021470:intron | 60.0% | |
| ! | AGAGGTGGAGGGTACGAAGG+AGG | - | chr7_1:45875290-45875309 | Msa1021470:intron | 60.0% |
| TACGAAGGAGGCAGAGGTGG+AGG | - | chr7_1:45875302-45875321 | Msa1021470:intron | 60.0% | |
| ACGAAGGAGGCAGAGGTGGA+GGG | - | chr7_1:45875303-45875322 | Msa1021470:intron | 60.0% | |
| ! | AGAGGTGGAGGGTATGGTGG+AGG | - | chr7_1:45875314-45875333 | Msa1021470:intron | 60.0% |
| ! | TATGGTGGAGGCAGAGGTGG+AGG | - | chr7_1:45875326-45875345 | Msa1021470:intron | 60.0% |
| GGAGGCAGAGGTGGAGGATA+TGG | - | chr7_1:45875332-45875351 | Msa1021470:intron | 60.0% | |
| GGCAGAGGTGGAGGATATGG+AGG | - | chr7_1:45875335-45875354 | Msa1021470:intron | 60.0% | |
| GGAGGATATGGAGGAGGCAG+AGG | - | chr7_1:45875344-45875363 | Msa1021470:intron | 60.0% | |
| GGATATGGAGGAGGCAGAGG+TGG | - | chr7_1:45875347-45875366 | Msa1021470:intron | 60.0% | |
| TATGGAGGAGGCAGAGGTGG+TGG | - | chr7_1:45875350-45875369 | Msa1021470:intron | 60.0% | |
| AGGAGGCAGAGGTGGAGGAA+TGG | - | chr7_1:45875403-45875422 | Msa1021470:intron | 60.0% | |
| GGAGGCAGAGGTGGAGGAAT+GGG | - | chr7_1:45875404-45875423 | Msa1021470:intron | 60.0% | |
| AGGCAGAGGTGGAGGTGGTA+TGG | - | chr7_1:45875436-45875455 | Msa1021470:intron | 60.0% | |
| GGCAGAGGTGGAGGTGGTAT+GGG | - | chr7_1:45875437-45875456 | Msa1021470:intron | 60.0% | |
| GGTTACGAAGGAGGCAGAGG+TGG | - | chr7_1:45875458-45875477 | Msa1021470:intron | 60.0% | |
| TACGAAGGAGGCAGAGGTGG+AGG | - | chr7_1:45875302-45875321 | Msa1021470:intron | 60.0% | |
| AGGAGGCAGAGGTGGAGGTA+TGG | - | chr7_1:45875466-45875485 | Msa1021470:intron | 60.0% | |
| ! | GGAGGCAGAGGTGGAGGTAT+GGG | - | chr7_1:45875467-45875486 | Msa1021470:intron | 60.0% |
| ATGAAAGAGGCAGGGGAGGC+AGG | - | chr7_1:45875492-45875511 | Msa1021470:intron | 60.0% | |
| TGAAAGAGGCAGGGGAGGCA+GGG | - | chr7_1:45875493-45875512 | Msa1021470:intron | 60.0% | |
| CAGGGGATATGGCCGTGGTA+GGG | - | chr7_1:45875511-45875530 | Msa1021470:intron | 60.0% | |
| AGGGGATATGGCCGTGGTAG+GGG | - | chr7_1:45875512-45875531 | Msa1021470:intron | 60.0% | |
| TGGCCGTGGTAGGGGAAGAA+TGG | - | chr7_1:45875520-45875539 | Msa1021470:intron | 60.0% | |
| GATGGACGTGGTGGTAGAGG+TGG | - | chr7_1:45875542-45875561 | Msa1021470:intron | 60.0% | |
| GACTCGTATGGCCGAGGTCG+TGG | - | chr7_1:45874532-45874551 | Msa1021470:intron | 65.0% | |
| TATGGCCGAGGTCGTGGTCG+AGG | - | chr7_1:45874538-45874557 | Msa1021470:intron | 65.0% | |
| CGAGGTCGTGGTCGAGGTAG+AGG | - | chr7_1:45874544-45874563 | Msa1021470:intron | 65.0% | |
| CGTGGTCGAGGTAGAGGGAG+AGG | - | chr7_1:45874550-45874569 | Msa1021470:intron | 65.0% | |
| GGGAGGTCGAGGCAGAGGTT+GGG | - | chr7_1:45874799-45874818 | Msa1021470:intron | 65.0% | |
| GGAGGTCGAGGCAGAGGTTG+GGG | - | chr7_1:45874800-45874819 | Msa1021470:intron | 65.0% | |
| GAGGTCGAGGCAGAGGTTGG+GGG | - | chr7_1:45874801-45874820 | Msa1021470:intron | 65.0% | |
| !! | GGCAGAGGTTGGGGGTATCG+TGG | - | chr7_1:45874809-45874828 | Msa1021470:intron | 65.0% |
| GGTGGCAGGGGTGGAGGTTA+TGG | - | chr7_1:45875263-45875282 | Msa1021470:intron | 65.0% | |
| GGCAGGGGTGGAGGTTATGG+AGG | - | chr7_1:45875266-45875285 | Msa1021470:intron | 65.0% | |
| ! | GGCAGAGGTGGAGGGTACGA+AGG | - | chr7_1:45875287-45875306 | Msa1021470:intron | 65.0% |
| ! | GGAGGGTACGAAGGAGGCAG+AGG | - | chr7_1:45875296-45875315 | Msa1021470:intron | 65.0% |
| GGGTACGAAGGAGGCAGAGG+TGG | - | chr7_1:45875299-45875318 | Msa1021470:intron | 65.0% | |
| GGAGGCAGAGGTGGAGGGTA+TGG | - | chr7_1:45875284-45875303 | Msa1021470:intron | 65.0% | |
| ! | GGCAGAGGTGGAGGGTATGG+TGG | - | chr7_1:45875311-45875330 | Msa1021470:intron | 65.0% |
| ! | GGAGGGTATGGTGGAGGCAG+AGG | - | chr7_1:45875320-45875339 | Msa1021470:intron | 65.0% |
| ! | GGGTATGGTGGAGGCAGAGG+TGG | - | chr7_1:45875323-45875342 | Msa1021470:intron | 65.0% |
| GTAGGAGGCAGAGGTGGAGG+TGG | - | chr7_1:45875431-45875450 | Msa1021470:intron | 65.0% | |
| GAAAGAGGCAGGGGAGGCAG+GGG | - | chr7_1:45875494-45875513 | Msa1021470:intron | 65.0% | |
| GCAGGGGATATGGCCGTGGT+AGG | - | chr7_1:45875510-45875529 | Msa1021470:intron | 65.0% | |
| TCTAATCGCGGCCGAGGGGG+AGG | - | chr7_1:45874782-45874801 | Msa1021470:intron | 70.0% | |
| CTCTGCCTCGACCTCCCCCT+CGG | + | chr7_1:45874796-45874815 | None:intergenic | 70.0% | |
| GGGGAGGTCGAGGCAGAGGT+TGG | - | chr7_1:45874798-45874817 | Msa1021470:intron | 70.0% | |
| ! | GGTGGTTACGGTGGCGGCAG+AGG | - | chr7_1:45875155-45875174 | Msa1021470:intron | 70.0% |
| ! | GGTTACGGTGGCGGCAGAGG+TGG | - | chr7_1:45875158-45875177 | Msa1021470:intron | 70.0% |
| ! | TACGGTGGCGGCAGAGGTGG+AGG | - | chr7_1:45875161-45875180 | Msa1021470:intron | 70.0% |
| GGCAGGGGAGGCAGGGGATA+TGG | - | chr7_1:45875500-45875519 | Msa1021470:intron | 70.0% | |
| GGAGGCAGGGGATATGGCCG+TGG | - | chr7_1:45875506-45875525 | Msa1021470:intron | 70.0% | |
| CGAGGGGGAGGTCGAGGCAG+AGG | - | chr7_1:45874794-45874813 | Msa1021470:intron | 75.0% | |
| ! | CGCGGCCGAGGGGGAGGTCG+AGG | - | chr7_1:45874788-45874807 | Msa1021470:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 45870975 | 45875963 | 45870975 | ID=Msa1021470;Name=Msa1021470 |
| chr7_1 | mRNA | 45870975 | 45875963 | 45870975 | ID=Msa1021470-mRNA-1;Parent=Msa1021470;Name=Msa1021470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=174|1|1|1|1|1|8|383|364 |
| chr7_1 | exon | 45870975 | 45871782 | 45870975 | ID=Msa1021470-mRNA-1:exon:9075;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45872108 | 45872170 | 45872108 | ID=Msa1021470-mRNA-1:exon:9074;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45872268 | 45872405 | 45872268 | ID=Msa1021470-mRNA-1:exon:9073;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45872485 | 45872585 | 45872485 | ID=Msa1021470-mRNA-1:exon:9072;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45872756 | 45872830 | 45872756 | ID=Msa1021470-mRNA-1:exon:9071;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45872925 | 45873013 | 45872925 | ID=Msa1021470-mRNA-1:exon:9070;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45873272 | 45873352 | 45873272 | ID=Msa1021470-mRNA-1:exon:9069;Parent=Msa1021470-mRNA-1 |
| chr7_1 | exon | 45875667 | 45875963 | 45875667 | ID=Msa1021470-mRNA-1:exon:9068;Parent=Msa1021470-mRNA-1 |
| chr7_1 | five_prime_UTR | 45875790 | 45875963 | 45875790 | ID=Msa1021470-mRNA-1:five_prime_utr;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45875667 | 45875789 | 45875667 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45873272 | 45873352 | 45873272 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45872925 | 45873013 | 45872925 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45872756 | 45872830 | 45872756 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45872485 | 45872585 | 45872485 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45872268 | 45872405 | 45872268 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45872108 | 45872170 | 45872108 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | CDS | 45871358 | 45871782 | 45871358 | ID=Msa1021470-mRNA-1:cds;Parent=Msa1021470-mRNA-1 |
| chr7_1 | three_prime_UTR | 45870975 | 45871357 | 45870975 | ID=Msa1021470-mRNA-1:three_prime_utr;Parent=Msa1021470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
