Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085420 | XP_013446579.1 | 99.147 | 469 | 4 | 0 | 1 | 469 | 1 | 469 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085420 | sp|Q9ZUN8|HTD1_ARATH | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085420 | A0A072TTT6 | 99.147 | 469 | 4 | 0 | 1 | 469 | 1 | 469 | 0.0 | 962 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032780 | Msa1085420 | 0.828252 | 9.970561e-55 | -8.615850e-47 |
| Msa0044990 | Msa1085420 | 0.851621 | 7.877910e-61 | -8.615850e-47 |
| Msa0115870 | Msa1085420 | 0.852900 | 3.406484e-61 | -8.615850e-47 |
| Msa0617540 | Msa1085420 | 0.842552 | 2.412618e-58 | -8.615850e-47 |
| Msa0656410 | Msa1085420 | 0.830123 | 3.506357e-55 | -8.615850e-47 |
| Msa0666560 | Msa1085420 | -0.805006 | 1.644114e-49 | -8.615850e-47 |
| Msa0698780 | Msa1085420 | 0.819917 | 9.030360e-53 | -8.615850e-47 |
| Msa0140850 | Msa1085420 | 0.803566 | 3.279307e-49 | -8.615850e-47 |
| Msa0190240 | Msa1085420 | 0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa0199620 | Msa1085420 | 0.800102 | 1.687358e-48 | -8.615850e-47 |
| Msa0208290 | Msa1085420 | 0.824698 | 7.009015e-54 | -8.615850e-47 |
| Msa0208320 | Msa1085420 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0229150 | Msa1085420 | 0.863043 | 3.298892e-64 | -8.615850e-47 |
| Msa0376830 | Msa1085420 | 0.812757 | 3.611204e-51 | -8.615850e-47 |
| Msa1021470 | Msa1085420 | 0.834877 | 2.324139e-56 | -8.615850e-47 |
| Msa1085420 | Msa1277260 | 0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa1085420 | Msa1300620 | 0.809109 | 2.225718e-50 | -8.615850e-47 |
| Msa1085420 | Msa1315890 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
| Msa1085420 | Msa1329730 | 0.813662 | 2.284958e-51 | -8.615850e-47 |
| Msa1085420 | Msa1329750 | 0.836116 | 1.130057e-56 | -8.615850e-47 |
| Msa1085420 | Msa1362210 | 0.825267 | 5.146013e-54 | -8.615850e-47 |
| Msa1085420 | Msa1364480 | 0.848141 | 7.404531e-60 | -8.615850e-47 |
| Msa1085420 | Msa1365140 | 0.824238 | 8.995802e-54 | -8.615850e-47 |
| Msa1085420 | Msa1420430 | 0.852793 | 3.655107e-61 | -8.615850e-47 |
| Msa1085420 | Msa1445370 | 0.855166 | 7.569086e-62 | -8.615850e-47 |
| Msa0516810 | Msa1085420 | 0.850602 | 1.527178e-60 | -8.615850e-47 |
| Msa0524110 | Msa1085420 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085420 | MtrunA17_Chr8g0377441 | 99.147 | 469 | 4 | 0 | 1 | 469 | 1 | 469 | 0.0 | 962 |
| Msa1085420 | MtrunA17_Chr5g0406931 | 79.310 | 464 | 76 | 7 | 1 | 460 | 1 | 448 | 0.0 | 676 |
| Msa1085420 | MtrunA17_Chr4g0052291 | 28.934 | 394 | 214 | 12 | 52 | 428 | 29 | 373 | 5.61e-34 | 132 |
| Msa1085420 | MtrunA17_Chr2g0299271 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 6.26e-32 | 127 |
| Msa1085420 | MtrunA17_Chr4g0036951 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 8.40e-29 | 117 |
| Msa1085420 | MtrunA17_Chr2g0330271 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.33e-25 | 109 |
| Msa1085420 | MtrunA17_Chr2g0283891 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 2.97e-16 | 79.7 |
| Msa1085420 | MtrunA17_Chr1g0176241 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.42e-12 | 69.7 |
| Msa1085420 | MtrunA17_Chr5g0447911 | 34.127 | 126 | 72 | 3 | 269 | 391 | 250 | 367 | 9.77e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085420 | AT2G19540.1 | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
| Msa1085420 | AT5G58230.1 | 31.013 | 316 | 173 | 8 | 126 | 428 | 90 | 373 | 1.21e-35 | 137 |
| Msa1085420 | AT2G16780.1 | 29.114 | 316 | 191 | 8 | 146 | 450 | 92 | 385 | 6.56e-34 | 132 |
| Msa1085420 | AT4G35050.1 | 28.481 | 316 | 193 | 8 | 146 | 450 | 93 | 386 | 1.86e-31 | 125 |
| Msa1085420 | AT2G19520.1 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.10e-27 | 115 |
| Msa1085420 | AT4G29730.1 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.48e-26 | 112 |
| Msa1085420 | AT4G29730.3 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 7.16e-25 | 107 |
| Msa1085420 | AT4G29730.2 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 7.16e-25 | 107 |
| Msa1085420 | AT1G29260.1 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.34e-14 | 75.1 |
| Msa1085420 | AT4G34460.4 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.30e-12 | 68.2 |
| Msa1085420 | AT4G34460.1 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.58e-12 | 68.2 |
| Msa1085420 | AT4G34460.3 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.98e-12 | 67.8 |
| Msa1085420 | AT4G34460.2 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.35e-12 | 67.0 |
| Msa1085420 | AT5G25150.1 | 26.829 | 246 | 151 | 13 | 160 | 395 | 351 | 577 | 6.23e-11 | 65.1 |
| Msa1085420 | AT5G25150.2 | 26.829 | 246 | 151 | 13 | 160 | 395 | 351 | 577 | 7.21e-11 | 65.1 |
Find 138 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 7_2:+86140964 | Msa1085420:CDS |
| CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 7_2:-86144417 | None:intergenic |
| CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 7_2:+86144354 | Msa1085420:intron |
| ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 7_2:+86139900 | Msa1085420:CDS |
| AAACCTTCTTGGAATTCTAT+TGG | 0.254653 | 7_2:+86140937 | Msa1085420:CDS |
| CTGCCCAAGATGCACATATA+TGG | 0.270395 | 7_2:-86141271 | None:intergenic |
| GTACAAAAGCAAAATTTCTT+TGG | 0.285637 | 7_2:-86145054 | None:intergenic |
| TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 7_2:+86143293 | Msa1085420:CDS |
| CACACAGTGTATTTCATTAC+AGG | 0.300493 | 7_2:+86140522 | Msa1085420:CDS |
| TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 7_2:-86144819 | None:intergenic |
| CTTTGGCATAACTTAGATTC+AGG | 0.310531 | 7_2:-86145037 | None:intergenic |
| TGCAATATGGGATACTCGTT+TGG | 0.310651 | 7_2:+86143306 | Msa1085420:CDS |
| GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 7_2:-86144818 | None:intergenic |
| AACCTTCTTGGAATTCTATT+GGG | 0.322573 | 7_2:+86140938 | Msa1085420:CDS |
| GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 7_2:+86139787 | Msa1085420:CDS |
| CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 7_2:-86143089 | None:intergenic |
| AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 7_2:-86144436 | None:intergenic |
| GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 7_2:+86142874 | Msa1085420:CDS |
| GCAATATGGGATACTCGTTT+GGG | 0.354043 | 7_2:+86143307 | Msa1085420:CDS |
| TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 7_2:+86141089 | Msa1085420:CDS |
| ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 7_2:-86140974 | None:intergenic |
| TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 7_2:+86139781 | Msa1085420:CDS |
| CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 7_2:+86142807 | Msa1085420:CDS |
| CCCAGGCTGAGAAACCTTCT+TGG | 0.379293 | 7_2:+86140926 | Msa1085420:intron |
| CATTGGCACACACAGATTCC+TGG | 0.384701 | 7_2:+86144830 | Msa1085420:CDS |
| CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 7_2:+86141225 | Msa1085420:CDS |
| TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 7_2:+86141014 | Msa1085420:CDS |
| ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 7_2:-86142797 | None:intergenic |
| CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 7_2:-86144453 | None:intergenic |
| TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 7_2:+86143531 | Msa1085420:CDS |
| GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 7_2:-86141006 | None:intergenic |
| GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 7_2:+86143294 | Msa1085420:CDS |
| TGCCCAAGATGCACATATAT+GGG | 0.425064 | 7_2:-86141270 | None:intergenic |
| CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 7_2:-86144452 | None:intergenic |
| TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 7_2:+86141278 | Msa1085420:CDS |
| GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 7_2:+86143483 | Msa1085420:CDS |
| TCCCCATATATGTGCATCTT+GGG | 0.431645 | 7_2:+86141268 | Msa1085420:CDS |
| AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 7_2:-86144416 | None:intergenic |
| TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 7_2:-86141244 | None:intergenic |
| TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 7_2:+86139772 | Msa1085420:CDS |
| GCAGTACATACTATCATTCC+AGG | 0.440018 | 7_2:-86144848 | None:intergenic |
| TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 7_2:+86140965 | Msa1085420:CDS |
| CCTCGTCCCTTTCCAAAGAA+AGG | 0.449348 | 7_2:-86144366 | None:intergenic |
| TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 7_2:+86144095 | Msa1085420:CDS |
| ATCCCCATATATGTGCATCT+TGG | 0.460743 | 7_2:+86141267 | Msa1085420:CDS |
| AACTAGGTTACGCAGATTGT+AGG | 0.460907 | 7_2:-86139402 | None:intergenic |
| CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 7_2:-86142807 | None:intergenic |
| CCAACTATTGTTTATTCACC+AGG | 0.472482 | 7_2:+86144453 | Msa1085420:CDS |
| TTTGGAAAGGGACGAGGAAG+AGG | 0.474332 | 7_2:+86144372 | Msa1085420:CDS |
| TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 7_2:-86144062 | None:intergenic |
| ATGGGACCTTTCTTTGGAAA+GGG | 0.487675 | 7_2:+86144360 | Msa1085420:CDS |
| GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 7_2:+86143484 | Msa1085420:CDS |
| AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 7_2:-86144896 | None:intergenic |
| TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 7_2:+86143496 | Msa1085420:CDS |
| TACAAGGCAGTATCTGCTAT+AGG | 0.495721 | 7_2:+86144970 | Msa1085420:three_prime_UTR |
| ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 7_2:+86142857 | Msa1085420:CDS |
| AAACTTAGCACAAGCAGATA+AGG | 0.498037 | 7_2:-86145119 | None:intergenic |
| CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 7_2:+86139806 | Msa1085420:CDS |
| ACCTGTGAGTGGCTTGTTGT+TGG | 0.504353 | 7_2:-86139442 | None:intergenic |
| TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 7_2:+86143371 | Msa1085420:CDS |
| AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 7_2:+86144342 | Msa1085420:intron |
| CCTTTCTTTGGAAAGGGACG+AGG | 0.509559 | 7_2:+86144366 | Msa1085420:CDS |
| CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 7_2:-86144072 | None:intergenic |
| GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 7_2:+86142889 | Msa1085420:CDS |
| ATAGCAGATACTGCCTTGTA+AGG | 0.517707 | 7_2:-86144967 | None:intergenic |
| GCAGATAAGGAAATTAATAG+AGG | 0.518815 | 7_2:-86145106 | None:intergenic |
| TATGGGACCTTTCTTTGGAA+AGG | 0.520046 | 7_2:+86144359 | Msa1085420:CDS |
| GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 7_2:+86141289 | Msa1085420:CDS |
| TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 7_2:+86140981 | Msa1085420:CDS |
| GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 7_2:+86139763 | Msa1085420:intron |
| GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 7_2:+86141072 | Msa1085420:CDS |
| CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 7_2:+86139616 | Msa1085420:CDS |
| GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 7_2:+86141063 | Msa1085420:CDS |
| ACTAGGTTACGCAGATTGTA+GGG | 0.533840 | 7_2:-86139401 | None:intergenic |
| GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 7_2:-86141099 | None:intergenic |
| GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 7_2:+86139820 | Msa1085420:CDS |
| ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 7_2:+86142790 | Msa1085420:CDS |
| CAATAATAGTATTTATCTGT+GGG | 0.539902 | 7_2:+86143028 | Msa1085420:CDS |
| TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 7_2:-86142892 | None:intergenic |
| AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 7_2:+86142841 | Msa1085420:CDS |
| TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 7_2:-86144082 | None:intergenic |
| GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 7_2:+86139769 | Msa1085420:CDS |
| GCAATAATAGTATTTATCTG+TGG | 0.558281 | 7_2:+86143027 | Msa1085420:CDS |
| ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 7_2:+86144857 | Msa1085420:CDS |
| TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 7_2:-86143053 | None:intergenic |
| TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 7_2:-86139869 | None:intergenic |
| ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 7_2:-86142883 | None:intergenic |
| ATCCCAATAGAATTCCAAGA+AGG | 0.572795 | 7_2:-86140940 | None:intergenic |
| TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 7_2:-86143337 | None:intergenic |
| AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 7_2:+86144813 | Msa1085420:CDS |
| TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 7_2:+86143477 | Msa1085420:intron |
| GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 7_2:-86139889 | None:intergenic |
| GGCATAACTTAGATTCAGGA+TGG | 0.577023 | 7_2:-86145033 | None:intergenic |
| TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 7_2:-86144889 | None:intergenic |
| ACCAACAACAAGCCACTCAC+AGG | 0.580280 | 7_2:+86139441 | Msa1085420:five_prime_UTR |
| TCTTCCAACTTATCCACACC+AGG | 0.583170 | 7_2:-86139824 | None:intergenic |
| TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 7_2:-86144817 | None:intergenic |
| AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 7_2:+86143051 | Msa1085420:CDS |
| TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 7_2:-86140493 | None:intergenic |
| AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 7_2:+86139811 | Msa1085420:CDS |
| GTATTTCATTACAGGGACAC+AGG | 0.601861 | 7_2:+86140530 | Msa1085420:CDS |
| CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 7_2:+86143365 | Msa1085420:CDS |
| TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 7_2:-86141091 | None:intergenic |
| TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 7_2:-86144127 | None:intergenic |
| TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 7_2:+86143497 | Msa1085420:CDS |
| TATTAACCGGATACGCTCCA+TGG | 0.608736 | 7_2:+86141238 | Msa1085420:CDS |
| ACACAGTGTATTTCATTACA+GGG | 0.609707 | 7_2:+86140523 | Msa1085420:CDS |
| GGAAAGGGACGAGGAAGAGG+AGG | 0.611092 | 7_2:+86144375 | Msa1085420:CDS |
| GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 7_2:+86141075 | Msa1085420:CDS |
| GACGAAGAAGAGAAAGAACT+AGG | 0.614313 | 7_2:-86139418 | None:intergenic |
| ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 7_2:+86141018 | Msa1085420:CDS |
| CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 7_2:+86139798 | Msa1085420:CDS |
| ACCTTTGACAAACCTGTGAG+TGG | 0.623381 | 7_2:-86139453 | None:intergenic |
| ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 7_2:+86142875 | Msa1085420:CDS |
| GCAGATACTGCCTTGTAAGG+TGG | 0.628414 | 7_2:-86144964 | None:intergenic |
| GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 7_2:-86144040 | None:intergenic |
| TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 7_2:-86144448 | None:intergenic |
| AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 7_2:+86139634 | Msa1085420:CDS |
| ATCCAATCACATCCATTGAG+TGG | 0.634447 | 7_2:+86144070 | Msa1085420:CDS |
| GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 7_2:+86142878 | Msa1085420:CDS |
| TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 7_2:-86144915 | None:intergenic |
| TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 7_2:+86141023 | Msa1085420:CDS |
| GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 7_2:-86144096 | None:intergenic |
| TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 7_2:+86144023 | Msa1085420:intron |
| GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 7_2:-86144920 | None:intergenic |
| TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 7_2:+86141038 | Msa1085420:CDS |
| GTAATGAAATACACTGTGTG+TGG | 0.652047 | 7_2:-86140519 | None:intergenic |
| GCCCAAGATGCACATATATG+GGG | 0.653392 | 7_2:-86141269 | None:intergenic |
| TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 7_2:+86141199 | Msa1085420:intron |
| AACTAATTGAAGATGACTCG+CGG | 0.660356 | 7_2:+86139596 | Msa1085420:exon |
| TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 7_2:-86139911 | None:intergenic |
| TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 7_2:-86144451 | None:intergenic |
| AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 7_2:+86141066 | Msa1085420:CDS |
| ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 7_2:+86139766 | Msa1085420:CDS |
| CAATATGGGATACTCGTTTG+GGG | 0.693736 | 7_2:+86143308 | Msa1085420:CDS |
| TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 7_2:+86143311 | Msa1085420:CDS |
| CTAGCAGAGACAGAAACCGA+AGG | 0.703665 | 7_2:+86142781 | Msa1085420:CDS |
| TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 7_2:+86141212 | Msa1085420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATATATCTAATCA+AGG | - | chr7_2:86144755-86144774 | None:intergenic | 10.0% |
| !!! | TTTTGAAAAAATTGAAGAAA+CGG | + | chr7_2:86139747-86139766 | Msa1085420:intron | 15.0% |
| !!! | TCATGATTTATTTTTTGTTT+GGG | + | chr7_2:86140439-86140458 | Msa1085420:intron | 15.0% |
| !! | ATTTCAAAGATTAACTTATA+AGG | - | chr7_2:86142173-86142192 | None:intergenic | 15.0% |
| !!! | ATAAGTTAATCTTTGAAATA+TGG | + | chr7_2:86142174-86142193 | Msa1085420:intron | 15.0% |
| !! | AATATTATCTATACTAATGT+TGG | - | chr7_2:86142273-86142292 | None:intergenic | 15.0% |
| !!! | CAACATATTGAAATTTTTTA+AGG | + | chr7_2:86142577-86142596 | Msa1085420:intron | 15.0% |
| !! | AATAACAAAAACAAAATAGT+CGG | - | chr7_2:86143975-86143994 | None:intergenic | 15.0% |
| !!! | AAGTTCATTATTTTTTGAAT+AGG | + | chr7_2:86144008-86144027 | Msa1085420:intron | 15.0% |
| !!! | GATAATATTTCTGATTCATT+TGG | + | chr7_2:86139549-86139568 | Msa1085420:intron | 20.0% |
| !!! | GTCATGATTTATTTTTTGTT+TGG | + | chr7_2:86140438-86140457 | Msa1085420:intron | 20.0% |
| !!! | CATGATTTATTTTTTGTTTG+GGG | + | chr7_2:86140440-86140459 | Msa1085420:intron | 20.0% |
| !!! | TAGAATTTTTTGTCCTTTAA+TGG | + | chr7_2:86140687-86140706 | Msa1085420:intron | 20.0% |
| !!! | TTTAAAGTATCCAATATTTC+TGG | + | chr7_2:86140964-86140983 | Msa1085420:CDS | 20.0% |
| !!! | TTAAAGTATCCAATATTTCT+GGG | + | chr7_2:86140965-86140984 | Msa1085420:CDS | 20.0% |
| !! | AGTAAAAATTCATATGAAGA+GGG | - | chr7_2:86141120-86141139 | None:intergenic | 20.0% |
| !! | AAGTAAAAATTCATATGAAG+AGG | - | chr7_2:86141121-86141140 | None:intergenic | 20.0% |
| !!! | GAGTTAATTTTTTTAATCGA+CGG | + | chr7_2:86141380-86141399 | Msa1085420:intron | 20.0% |
| !! | TGTGAAACATATGTATAAAA+TGG | + | chr7_2:86142137-86142156 | Msa1085420:intron | 20.0% |
| !! | TATAGTACTAAACAAACTAT+GGG | - | chr7_2:86142200-86142219 | None:intergenic | 20.0% |
| !! | TTATAGTACTAAACAAACTA+TGG | - | chr7_2:86142201-86142220 | None:intergenic | 20.0% |
| !!! | TAGTATAGATAATATTTCTG+CGG | + | chr7_2:86142277-86142296 | Msa1085420:intron | 20.0% |
| !!! | TTAAGGTTCTTAAATTTTAG+CGG | + | chr7_2:86142594-86142613 | Msa1085420:intron | 20.0% |
| !! | TTGAACAAAAATATACAACT+CGG | - | chr7_2:86142704-86142723 | None:intergenic | 20.0% |
| !! | CAATAATAGTATTTATCTGT+GGG | + | chr7_2:86143028-86143047 | Msa1085420:CDS | 20.0% |
| !!! | TTTGTATGGTTTTTCTATAT+GGG | - | chr7_2:86143581-86143600 | None:intergenic | 20.0% |
| !!! | TTTTGTATGGTTTTTCTATA+TGG | - | chr7_2:86143582-86143601 | None:intergenic | 20.0% |
| !!! | AGAAAGTTTACAATTTTGTA+TGG | - | chr7_2:86143595-86143614 | None:intergenic | 20.0% |
| !! | TAATGATGTAATATGCTATT+AGG | - | chr7_2:86143761-86143780 | None:intergenic | 20.0% |
| !!! | TCATTATTTTTTGAATAGGA+AGG | + | chr7_2:86144012-86144031 | Msa1085420:intron | 20.0% |
| !! | ATAAATCCCTGAAATTTATT+AGG | - | chr7_2:86144205-86144224 | None:intergenic | 20.0% |
| !! | AATCCAAAGTAAGAAAAATA+AGG | - | chr7_2:86144308-86144327 | None:intergenic | 20.0% |
| !!! | CATTTTTCTTTCAAGTATTT+GGG | - | chr7_2:86145284-86145303 | None:intergenic | 20.0% |
| !!! | TCATTTTTCTTTCAAGTATT+TGG | - | chr7_2:86145285-86145304 | None:intergenic | 20.0% |
| !! | AAATACTTGAAAGAAAAATG+AGG | + | chr7_2:86145284-86145303 | Msa1085420:three_prime_UTR | 20.0% |
| !!! | AATAAAACCCATTATTTTGC+TGG | + | chr7_2:86139966-86139985 | Msa1085420:intron | 25.0% |
| ! | ATAATTCAATGTAGTCACTT+GGG | + | chr7_2:86140132-86140151 | Msa1085420:intron | 25.0% |
| ! | AAGAATTATGACATTGTGAT+TGG | + | chr7_2:86140239-86140258 | Msa1085420:intron | 25.0% |
| !! | TCTTGTGTGTTTTCTTTTAT+AGG | + | chr7_2:86140568-86140587 | Msa1085420:intron | 25.0% |
| ! | AAAACTCAAAAGTCCATTAA+AGG | - | chr7_2:86140703-86140722 | None:intergenic | 25.0% |
| !! | TTAAACTATGAGCAACTTTT+TGG | - | chr7_2:86141433-86141452 | None:intergenic | 25.0% |
| ! | CATATTTCATACTATGTTAG+TGG | + | chr7_2:86141466-86141485 | Msa1085420:intron | 25.0% |
| !!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr7_2:86141615-86141634 | Msa1085420:intron | 25.0% |
| !!! | TTTTTCTTGTTTCAATGTTG+TGG | + | chr7_2:86141648-86141667 | Msa1085420:intron | 25.0% |
| ! | AATCATTCAACTGTTAATGT+GGG | - | chr7_2:86141872-86141891 | None:intergenic | 25.0% |
| ! | TCAAAATGACAAAATATGTG+TGG | - | chr7_2:86141985-86142004 | None:intergenic | 25.0% |
| ! | TAGAATGTATAAGATTGAAG+TGG | + | chr7_2:86142029-86142048 | Msa1085420:intron | 25.0% |
| ! | TAAATTTAGCTACATGATTG+TGG | + | chr7_2:86142058-86142077 | Msa1085420:intron | 25.0% |
| !!! | GGACTTTATTGTTTTTGTTA+TGG | + | chr7_2:86142083-86142102 | Msa1085420:intron | 25.0% |
| ! | TTATCTATACTAATGTTGGT+AGG | - | chr7_2:86142269-86142288 | None:intergenic | 25.0% |
| ! | CGTAATAAATTTGTAGATCT+GGG | + | chr7_2:86142735-86142754 | Msa1085420:intron | 25.0% |
| !! | TTGTGCTTAAATTTTTGTAG+TGG | - | chr7_2:86142835-86142854 | None:intergenic | 25.0% |
| ! | AAATTTAAGCACAAAGATGA+AGG | + | chr7_2:86142841-86142860 | Msa1085420:CDS | 25.0% |
| ! | TCATTGTCAAAGTAGATATA+AGG | + | chr7_2:86142972-86142991 | Msa1085420:intron | 25.0% |
| ! | GCAATAATAGTATTTATCTG+TGG | + | chr7_2:86143027-86143046 | Msa1085420:CDS | 25.0% |
| !! | ATTGAAAAAACTCCTTTTAC+TGG | + | chr7_2:86143077-86143096 | Msa1085420:CDS | 25.0% |
| ! | AATGAAATACAACAGATATG+AGG | - | chr7_2:86143449-86143468 | None:intergenic | 25.0% |
| ! | AAACAGCAAAATTACTGTAT+AGG | + | chr7_2:86143626-86143645 | Msa1085420:intron | 25.0% |
| ! | TAATATGCTATTAGGACATA+AGG | - | chr7_2:86143753-86143772 | None:intergenic | 25.0% |
| ! | TCAACTTACGTAAGTAAATA+CGG | + | chr7_2:86144137-86144156 | Msa1085420:intron | 25.0% |
| ! | ACGAATTCCTAATAAATTTC+AGG | + | chr7_2:86144195-86144214 | Msa1085420:intron | 25.0% |
| ! | CGAATTCCTAATAAATTTCA+GGG | + | chr7_2:86144196-86144215 | Msa1085420:intron | 25.0% |
| ! | TGTTTCTCTCATATTATCTT+TGG | + | chr7_2:86144227-86144246 | Msa1085420:intron | 25.0% |
| ! | GTTTCTCTCATATTATCTTT+GGG | + | chr7_2:86144228-86144247 | Msa1085420:intron | 25.0% |
| !! | TAAGCTTTTGTATAATGAGA+AGG | - | chr7_2:86144696-86144715 | None:intergenic | 25.0% |
| ! | TACAAGTTAAAGGAAATAAG+AGG | - | chr7_2:86144782-86144801 | None:intergenic | 25.0% |
| !!! | TATTTCCTTTAACTTGTAAC+AGG | + | chr7_2:86144784-86144803 | Msa1085420:intron | 25.0% |
| !!! | ATTTCCTTTAACTTGTAACA+GGG | + | chr7_2:86144785-86144804 | Msa1085420:intron | 25.0% |
| !!! | TAGGTATTGCTATTTTAGTT+TGG | + | chr7_2:86144989-86145008 | Msa1085420:three_prime_UTR | 25.0% |
| ! | GTACAAAAGCAAAATTTCTT+TGG | - | chr7_2:86145057-86145076 | None:intergenic | 25.0% |
| ! | TGTAGGGTTTTTACGTTTTA+GGG | - | chr7_2:86139388-86139407 | None:intergenic | 30.0% |
| ! | TTGTAGGGTTTTTACGTTTT+AGG | - | chr7_2:86139389-86139408 | None:intergenic | 30.0% |
| AATAAAGTGCGAGATCAAAA+GGG | - | chr7_2:86139686-86139705 | None:intergenic | 30.0% | |
| TTTGTTCTTTACCTAAGACA+AGG | - | chr7_2:86139914-86139933 | None:intergenic | 30.0% | |
| GATAACTCCAGCAAAATAAT+GGG | - | chr7_2:86139976-86139995 | None:intergenic | 30.0% | |
| TGATAACTCCAGCAAAATAA+TGG | - | chr7_2:86139977-86139996 | None:intergenic | 30.0% | |
| CATAATTCAATGTAGTCACT+TGG | + | chr7_2:86140131-86140150 | Msa1085420:intron | 30.0% | |
| TGTCATAATTCTTGTGAAAG+AGG | - | chr7_2:86140232-86140251 | None:intergenic | 30.0% | |
| ! | TGACATAGAATTGGTAACAT+TGG | - | chr7_2:86140265-86140284 | None:intergenic | 30.0% |
| ACACAGTGTATTTCATTACA+GGG | + | chr7_2:86140523-86140542 | Msa1085420:CDS | 30.0% | |
| ACTGTTCATTACCAATCAAA+TGG | + | chr7_2:86140620-86140639 | Msa1085420:intron | 30.0% | |
| CTGTTCATTACCAATCAAAT+GGG | + | chr7_2:86140621-86140640 | Msa1085420:intron | 30.0% | |
| TGTTCATTACCAATCAAATG+GGG | + | chr7_2:86140622-86140641 | Msa1085420:intron | 30.0% | |
| !! | GTAACGGAAAAGTTGATATT+GGG | + | chr7_2:86140644-86140663 | Msa1085420:intron | 30.0% |
| AAAGCTAGTAAAACATGACT+AGG | - | chr7_2:86140850-86140869 | None:intergenic | 30.0% | |
| AAACCTTCTTGGAATTCTAT+TGG | + | chr7_2:86140937-86140956 | Msa1085420:CDS | 30.0% | |
| AACCTTCTTGGAATTCTATT+GGG | + | chr7_2:86140938-86140957 | Msa1085420:CDS | 30.0% | |
| ! | AGTTGATCTTACTGACATTT+TGG | + | chr7_2:86141171-86141190 | Msa1085420:intron | 30.0% |
| ! | GTTGATCTTACTGACATTTT+GGG | + | chr7_2:86141172-86141191 | Msa1085420:intron | 30.0% |
| !!! | AGTTTTAAAAACCCTATGAC+TGG | + | chr7_2:86141314-86141333 | Msa1085420:intron | 30.0% |
| GCTTTAACCAAACATTTACT+TGG | - | chr7_2:86141347-86141366 | None:intergenic | 30.0% | |
| GTAGTAAATGAGCCATTATT+TGG | + | chr7_2:86141490-86141509 | Msa1085420:intron | 30.0% | |
| CTGATCCAATAGAAATAACT+TGG | - | chr7_2:86141623-86141642 | None:intergenic | 30.0% | |
| !! | AGTTATTTCTATTGGATCAG+AGG | + | chr7_2:86141623-86141642 | Msa1085420:intron | 30.0% |
| !! | GTTATTTCTATTGGATCAGA+GGG | + | chr7_2:86141624-86141643 | Msa1085420:intron | 30.0% |
| !!! | TGAATGTTGTTATTTTGCCA+TGG | + | chr7_2:86141765-86141784 | Msa1085420:intron | 30.0% |
| !!! | GAATGTTGTTATTTTGCCAT+GGG | + | chr7_2:86141766-86141785 | Msa1085420:intron | 30.0% |
| CTTAGTAGAACATTGTCAAA+GGG | - | chr7_2:86141825-86141844 | None:intergenic | 30.0% | |
| TCTTAGTAGAACATTGTCAA+AGG | - | chr7_2:86141826-86141845 | None:intergenic | 30.0% | |
| ATCATTCAACTGTTAATGTG+GGG | - | chr7_2:86141871-86141890 | None:intergenic | 30.0% | |
| CAATCATTCAACTGTTAATG+TGG | - | chr7_2:86141873-86141892 | None:intergenic | 30.0% | |
| TTTCACAATTAATGTCTGCA+TGG | - | chr7_2:86142124-86142143 | None:intergenic | 30.0% | |
| !! | AGTATCTCGTTTGATTTGAT+AGG | + | chr7_2:86142346-86142365 | Msa1085420:intron | 30.0% |
| AGGATAAATTATTCTGTTCC+AGG | + | chr7_2:86142366-86142385 | Msa1085420:intron | 30.0% | |
| ATGTTGCAATTGCAATACTT+AGG | - | chr7_2:86142431-86142450 | None:intergenic | 30.0% | |
| !! | AGTATCTCGTTTGATTTGAT+AGG | + | chr7_2:86142346-86142365 | Msa1085420:intron | 30.0% |
| AGGATAAATTATTCTGTTCC+AGG | + | chr7_2:86142366-86142385 | Msa1085420:intron | 30.0% | |
| ATGTTGCAATTGCAATACTT+AGG | - | chr7_2:86142431-86142450 | None:intergenic | 30.0% | |
| ACTTCTTTGATAGAAAGAGA+TGG | - | chr7_2:86142661-86142680 | None:intergenic | 30.0% | |
| GCGTAATAAATTTGTAGATC+TGG | + | chr7_2:86142734-86142753 | Msa1085420:intron | 30.0% | |
| AAAATAAGCCCAATGATTAC+CGG | - | chr7_2:86142911-86142930 | None:intergenic | 30.0% | |
| ATGTTGATCTTCATGTTTGT+AGG | + | chr7_2:86142999-86143018 | Msa1085420:intron | 30.0% | |
| TGTTGATCTTCATGTTTGTA+GGG | + | chr7_2:86143000-86143019 | Msa1085420:intron | 30.0% | |
| ! | TATTGCAATGCTTTTATCCA+CGG | - | chr7_2:86143293-86143312 | None:intergenic | 30.0% |
| !! | TGGATAAAAGCATTGCAATA+TGG | + | chr7_2:86143293-86143312 | Msa1085420:CDS | 30.0% |
| !! | GGATAAAAGCATTGCAATAT+GGG | + | chr7_2:86143294-86143313 | Msa1085420:CDS | 30.0% |
| TAGAATGAAAATTGAGTCGA+TGG | - | chr7_2:86143421-86143440 | None:intergenic | 30.0% | |
| TGTATTTCATTGTACTGAGT+AGG | + | chr7_2:86143458-86143477 | Msa1085420:intron | 30.0% | |
| GATGCTTTAATTGTCTTATC+TGG | + | chr7_2:86143704-86143723 | Msa1085420:intron | 30.0% | |
| ! | AGGAACTTTTTATCGGAAAA+TGG | - | chr7_2:86143733-86143752 | None:intergenic | 30.0% |
| ! | GGACATAAGGAACTTTTTAT+CGG | - | chr7_2:86143740-86143759 | None:intergenic | 30.0% |
| TCCTTCAAAAATGCATTTCT+GGG | - | chr7_2:86143870-86143889 | None:intergenic | 30.0% | |
| TTCCTTCAAAAATGCATTTC+TGG | - | chr7_2:86143871-86143890 | None:intergenic | 30.0% | |
| AACAAAAACAAAATAGTCGG+CGG | - | chr7_2:86143972-86143991 | None:intergenic | 30.0% | |
| !! | TTACGTAAGTTGATTATCAG+CGG | - | chr7_2:86144130-86144149 | None:intergenic | 30.0% |
| GTAAGAAAAATAAGGCAGTT+TGG | - | chr7_2:86144300-86144319 | None:intergenic | 30.0% | |
| !!! | CTGCCTTATTTTTCTTACTT+TGG | + | chr7_2:86144302-86144321 | Msa1085420:intron | 30.0% |
| !!! | TTGGGTTTTAGCTCTAAATT+CGG | - | chr7_2:86144401-86144420 | None:intergenic | 30.0% |
| TGGTGAATAAACAATAGTTG+GGG | - | chr7_2:86144454-86144473 | None:intergenic | 30.0% | |
| CTGGTGAATAAACAATAGTT+GGG | - | chr7_2:86144455-86144474 | None:intergenic | 30.0% | |
| AACCTAGCTTATACTCAAAT+AGG | - | chr7_2:86144624-86144643 | None:intergenic | 30.0% | |
| ! | TTTGAATATTTGAAGGCATG+AGG | - | chr7_2:86144892-86144911 | None:intergenic | 30.0% |
| ! | AAGGTGCTTTGAATATTTGA+AGG | - | chr7_2:86144899-86144918 | None:intergenic | 30.0% |
| !!! | TTGCTATTTTAGTTTGGACA+AGG | + | chr7_2:86144995-86145014 | Msa1085420:three_prime_UTR | 30.0% |
| GCAGATAAGGAAATTAATAG+AGG | - | chr7_2:86145109-86145128 | None:intergenic | 30.0% | |
| ! | GTAGGGTTTTTACGTTTTAG+GGG | - | chr7_2:86139387-86139406 | None:intergenic | 35.0% |
| AACTAATTGAAGATGACTCG+CGG | + | chr7_2:86139596-86139615 | Msa1085420:exon | 35.0% | |
| GAATAAAGTGCGAGATCAAA+AGG | - | chr7_2:86139687-86139706 | None:intergenic | 35.0% | |
| ! | TCTCTCCATGCTTTTCATAT+TGG | + | chr7_2:86139884-86139903 | Msa1085420:CDS | 35.0% |
| ! | TCCATGCTTTTCATATTGGA+TGG | + | chr7_2:86139888-86139907 | Msa1085420:CDS | 35.0% |
| CTGGAGTTATCACTGTTAAA+TGG | + | chr7_2:86139985-86140004 | Msa1085420:intron | 35.0% | |
| TCATAGCTCTTGAATTGCAA+TGG | - | chr7_2:86140053-86140072 | None:intergenic | 35.0% | |
| ! | TGACATAGAATTGGTGACAT+TGG | + | chr7_2:86140166-86140185 | Msa1085420:intron | 35.0% |
| ! | ATTGGTGACATTGGTAACAT+TGG | + | chr7_2:86140175-86140194 | Msa1085420:intron | 35.0% |
| AAGCAAACGCACAAAAATTG+TGG | - | chr7_2:86140386-86140405 | None:intergenic | 35.0% | |
| ! | GATATTTTACGTGACACCAT+GGG | + | chr7_2:86140477-86140496 | Msa1085420:CDS | 35.0% |
| GTAATGAAATACACTGTGTG+TGG | - | chr7_2:86140522-86140541 | None:intergenic | 35.0% | |
| CACACAGTGTATTTCATTAC+AGG | + | chr7_2:86140522-86140541 | Msa1085420:CDS | 35.0% | |
| TGTCTCATGAATCATCTTGA+AGG | + | chr7_2:86140592-86140611 | Msa1085420:intron | 35.0% | |
| TTACCAATCAAATGGGGTAA+CGG | + | chr7_2:86140628-86140647 | Msa1085420:intron | 35.0% | |
| !! | GGTAACGGAAAAGTTGATAT+TGG | + | chr7_2:86140643-86140662 | Msa1085420:intron | 35.0% |
| ACAAGGAGATTCTATGTGTT+GGG | - | chr7_2:86140746-86140765 | None:intergenic | 35.0% | |
| CATGCAACATATTATCAACG+AGG | - | chr7_2:86140903-86140922 | None:intergenic | 35.0% | |
| ATCCCAATAGAATTCCAAGA+AGG | - | chr7_2:86140943-86140962 | None:intergenic | 35.0% | |
| ! | TGAAACTGATGACTCTGAAA+TGG | + | chr7_2:86141014-86141033 | Msa1085420:CDS | 35.0% |
| TCCTTAGCCAAGTAAATGTT+TGG | + | chr7_2:86141337-86141356 | Msa1085420:intron | 35.0% | |
| ACCAAACATTTACTTGGCTA+AGG | - | chr7_2:86141341-86141360 | None:intergenic | 35.0% | |
| GATACGACAGAAAAGTTGAA+GGG | - | chr7_2:86141518-86141537 | None:intergenic | 35.0% | |
| TGATACGACAGAAAAGTTGA+AGG | - | chr7_2:86141519-86141538 | None:intergenic | 35.0% | |
| TCTTTCCTACATGCTATTAG+TGG | + | chr7_2:86141541-86141560 | Msa1085420:intron | 35.0% | |
| ATAGCACAAAGGATTCACAA+TGG | + | chr7_2:86141675-86141694 | Msa1085420:intron | 35.0% | |
| TAGCACAAAGGATTCACAAT+GGG | + | chr7_2:86141676-86141695 | Msa1085420:intron | 35.0% | |
| !!! | GCAAATTGCACTGATTGTTT+TGG | + | chr7_2:86141740-86141759 | Msa1085420:intron | 35.0% |
| CTTGGGTAATGACAAAATCT+GGG | - | chr7_2:86141799-86141818 | None:intergenic | 35.0% | |
| TCATTCAACTGTTAATGTGG+GGG | - | chr7_2:86141870-86141889 | None:intergenic | 35.0% | |
| AAAGTGAGTATTTGAGAGCT+TGG | + | chr7_2:86141906-86141925 | Msa1085420:intron | 35.0% | |
| TTGAGAGCTTGGAATTGTAA+CGG | + | chr7_2:86141917-86141936 | Msa1085420:intron | 35.0% | |
| ! | TCTAATGAGTTGAAGTTTGC+TGG | + | chr7_2:86142006-86142025 | Msa1085420:intron | 35.0% |
| TTTAGCTACATGATTGTGGT+TGG | + | chr7_2:86142062-86142081 | Msa1085420:intron | 35.0% | |
| !! | ATACTAGCTCTGAACTTTGT+CGG | - | chr7_2:86142331-86142350 | None:intergenic | 35.0% |
| ! | CAGGTATAATTTTTGCCCTT+GGG | + | chr7_2:86142385-86142404 | Msa1085420:intron | 35.0% |
| !! | TTAAATTTTAGCGGCAGCTA+AGG | + | chr7_2:86142603-86142622 | Msa1085420:intron | 35.0% |
| GTTGATCTTCATGTTTGTAG+GGG | + | chr7_2:86143001-86143020 | Msa1085420:intron | 35.0% | |
| ACACTGAAATGTTCCGAAAA+AGG | - | chr7_2:86143156-86143175 | None:intergenic | 35.0% | |
| CAAAAACATGAGGTTCTGTA+GGG | - | chr7_2:86143261-86143280 | None:intergenic | 35.0% | |
| CTGATGTGAATGTATTGTCA+TGG | + | chr7_2:86143365-86143384 | Msa1085420:CDS | 35.0% | |
| TGAATGTATTGTCATGGAAC+AGG | + | chr7_2:86143371-86143390 | Msa1085420:CDS | 35.0% | |
| !!! | AGGTATTCAGCATTGACTTT+TGG | + | chr7_2:86143391-86143410 | Msa1085420:intron | 35.0% |
| TTTCATTGTACTGAGTAGGT+TGG | + | chr7_2:86143462-86143481 | Msa1085420:intron | 35.0% | |
| ! | GTTTTTCTATATGGGCAAAG+GGG | - | chr7_2:86143573-86143592 | None:intergenic | 35.0% |
| ! | GGTTTTTCTATATGGGCAAA+GGG | - | chr7_2:86143574-86143593 | None:intergenic | 35.0% |
| ! | TGGTTTTTCTATATGGGCAA+AGG | - | chr7_2:86143575-86143594 | None:intergenic | 35.0% |
| ! | ACCCAGAAATGCATTTTTGA+AGG | + | chr7_2:86143866-86143885 | Msa1085420:intron | 35.0% |
| TATTTGCAGAGTCCATGAAA+GGG | - | chr7_2:86144259-86144278 | None:intergenic | 35.0% | |
| TTATTTGCAGAGTCCATGAA+AGG | - | chr7_2:86144260-86144279 | None:intergenic | 35.0% | |
| TAATCCTTTGCCACAGAATA+TGG | + | chr7_2:86144341-86144360 | Msa1085420:intron | 35.0% | |
| AATCCTTTGCCACAGAATAT+GGG | + | chr7_2:86144342-86144361 | Msa1085420:intron | 35.0% | |
| TGAATAAACAATAGTTGGGG+AGG | - | chr7_2:86144451-86144470 | None:intergenic | 35.0% | |
| CCTGGTGAATAAACAATAGT+TGG | - | chr7_2:86144456-86144475 | None:intergenic | 35.0% | |
| CCAACTATTGTTTATTCACC+AGG | + | chr7_2:86144453-86144472 | Msa1085420:CDS | 35.0% | |
| GCAAAGTGATTCAAATTACC+TGG | - | chr7_2:86144474-86144493 | None:intergenic | 35.0% | |
| AGCCTATTTGAGTATAAGCT+AGG | + | chr7_2:86144619-86144638 | Msa1085420:intron | 35.0% | |
| CTAATCAAGGAGTTCTATCA+TGG | - | chr7_2:86144742-86144761 | None:intergenic | 35.0% | |
| TTGTCCCTGTTACAAGTTAA+AGG | - | chr7_2:86144792-86144811 | None:intergenic | 35.0% | |
| ! | AAGTTTTCAACCACCTTACA+AGG | + | chr7_2:86144954-86144973 | Msa1085420:three_prime_UTR | 35.0% |
| CTTTGGCATAACTTAGATTC+AGG | - | chr7_2:86145040-86145059 | None:intergenic | 35.0% | |
| AAACTTAGCACAAGCAGATA+AGG | - | chr7_2:86145122-86145141 | None:intergenic | 35.0% | |
| !!! | TTGAGTTGAGTGTTTTGAGA+TGG | + | chr7_2:86145150-86145169 | Msa1085420:three_prime_UTR | 35.0% |
| ACTAGGTTACGCAGATTGTA+GGG | - | chr7_2:86139404-86139423 | None:intergenic | 40.0% | |
| AACTAGGTTACGCAGATTGT+AGG | - | chr7_2:86139405-86139424 | None:intergenic | 40.0% | |
| GACGAAGAAGAGAAAGAACT+AGG | - | chr7_2:86139421-86139440 | None:intergenic | 40.0% | |
| CGGCATAAAACATCGTCAAA+AGG | + | chr7_2:86139616-86139635 | Msa1085420:CDS | 40.0% | |
| AAAGGCAAAGAGCAAGAACA+AGG | + | chr7_2:86139634-86139653 | Msa1085420:CDS | 40.0% | |
| GAAACGGAGTGAATCATCTT+CGG | + | chr7_2:86139763-86139782 | Msa1085420:intron | 40.0% | |
| TGGAGAGAATTGTAAGCAGA+AGG | - | chr7_2:86139872-86139891 | None:intergenic | 40.0% | |
| GCCATCCAATATGAAAAGCA+TGG | - | chr7_2:86139892-86139911 | None:intergenic | 40.0% | |
| !! | ATATTGGATGGCCTTGTCTT+AGG | + | chr7_2:86139900-86139919 | Msa1085420:CDS | 40.0% |
| GCACTTGAGTGACATAGAAT+TGG | - | chr7_2:86140274-86140293 | None:intergenic | 40.0% | |
| ! | ACACCTTCAATCAGAAGTGT+CGG | + | chr7_2:86140332-86140351 | Msa1085420:intron | 40.0% |
| ATACCGACACTTCTGATTGA+AGG | - | chr7_2:86140338-86140357 | None:intergenic | 40.0% | |
| ! | GTCGGTATTTAGAGTTCAAG+AGG | + | chr7_2:86140350-86140369 | Msa1085420:intron | 40.0% |
| ! | CGATATTTTACGTGACACCA+TGG | + | chr7_2:86140476-86140495 | Msa1085420:CDS | 40.0% |
| TTCTGTTCGAACTAAACCCA+TGG | - | chr7_2:86140496-86140515 | None:intergenic | 40.0% | |
| GTATTTCATTACAGGGACAC+AGG | + | chr7_2:86140530-86140549 | Msa1085420:CDS | 40.0% | |
| TTTCCGTTACCCCATTTGAT+TGG | - | chr7_2:86140634-86140653 | None:intergenic | 40.0% | |
| CACAAGGAGATTCTATGTGT+TGG | - | chr7_2:86140747-86140766 | None:intergenic | 40.0% | |
| ACGTCTCTTCCCAGAAATAT+TGG | - | chr7_2:86140977-86140996 | None:intergenic | 40.0% | |
| GAGTCATCAGTTTCACGTTT+AGG | - | chr7_2:86141009-86141028 | None:intergenic | 40.0% | |
| !! | ACTGATGACTCTGAAATGGA+TGG | + | chr7_2:86141018-86141037 | Msa1085420:CDS | 40.0% |
| GATAGTGAAGACGAAGAAGA+AGG | + | chr7_2:86141063-86141082 | Msa1085420:CDS | 40.0% | |
| TCAACTTCAACACAGTCAAG+AGG | - | chr7_2:86141157-86141176 | None:intergenic | 40.0% | |
| CTCACGAAGGTTGTATTAAC+CGG | + | chr7_2:86141225-86141244 | Msa1085420:CDS | 40.0% | |
| ! | TATATGGGGATTTTGTGCCA+TGG | - | chr7_2:86141258-86141277 | None:intergenic | 40.0% |
| ATCCCCATATATGTGCATCT+TGG | + | chr7_2:86141267-86141286 | Msa1085420:CDS | 40.0% | |
| TCCCCATATATGTGCATCTT+GGG | + | chr7_2:86141268-86141287 | Msa1085420:CDS | 40.0% | |
| TGCCCAAGATGCACATATAT+GGG | - | chr7_2:86141273-86141292 | None:intergenic | 40.0% | |
| !! | AGTTGAAGGGTGCCAAATAA+TGG | - | chr7_2:86141505-86141524 | None:intergenic | 40.0% |
| TCTAGCCACTAATAGCATGT+AGG | - | chr7_2:86141549-86141568 | None:intergenic | 40.0% | |
| AGGATTCACAATGGGAATAG+AGG | + | chr7_2:86141684-86141703 | Msa1085420:intron | 40.0% | |
| GGATTCACAATGGGAATAGA+GGG | + | chr7_2:86141685-86141704 | Msa1085420:intron | 40.0% | |
| GCTTGGGTAATGACAAAATC+TGG | - | chr7_2:86141800-86141819 | None:intergenic | 40.0% | |
| ACATTGTCAAAGGGATGCTT+GGG | - | chr7_2:86141816-86141835 | None:intergenic | 40.0% | |
| AACATTGTCAAAGGGATGCT+TGG | - | chr7_2:86141817-86141836 | None:intergenic | 40.0% | |
| CCAAGGGCAAAAATTATACC+TGG | - | chr7_2:86142387-86142406 | None:intergenic | 40.0% | |
| ! | CCAGGTATAATTTTTGCCCT+TGG | + | chr7_2:86142384-86142403 | Msa1085420:intron | 40.0% |
| GTAACCTCATTTGTACCCAA+GGG | - | chr7_2:86142403-86142422 | None:intergenic | 40.0% | |
| AGTAACCTCATTTGTACCCA+AGG | - | chr7_2:86142404-86142423 | None:intergenic | 40.0% | |
| ! | CAGGTATAATTTTCGCCCTT+GGG | + | chr7_2:86142517-86142536 | Msa1085420:intron | 40.0% |
| GTAACCTCATTTGTACCCAA+GGG | - | chr7_2:86142403-86142422 | None:intergenic | 40.0% | |
| AGTAACCTCATTTGTACCCA+AGG | - | chr7_2:86142404-86142423 | None:intergenic | 40.0% | |
| ATGAAGGCTATGCTATAGAC+TGG | + | chr7_2:86142857-86142876 | Msa1085420:CDS | 40.0% | |
| GCTTGTATCCGGTAATCATT+GGG | + | chr7_2:86142900-86142919 | Msa1085420:intron | 40.0% | |
| CTGTCAGTATGTCCAGTAAA+AGG | - | chr7_2:86143092-86143111 | None:intergenic | 40.0% | |
| !! | GTTCCGAAAAAGGTATTGCT+TGG | - | chr7_2:86143146-86143165 | None:intergenic | 40.0% |
| GCAAAAACATGAGGTTCTGT+AGG | - | chr7_2:86143262-86143281 | None:intergenic | 40.0% | |
| GAGCAAGAAGCAAAAACATG+AGG | - | chr7_2:86143271-86143290 | None:intergenic | 40.0% | |
| TGCAATATGGGATACTCGTT+TGG | + | chr7_2:86143306-86143325 | Msa1085420:CDS | 40.0% | |
| GCAATATGGGATACTCGTTT+GGG | + | chr7_2:86143307-86143326 | Msa1085420:CDS | 40.0% | |
| CAATATGGGATACTCGTTTG+GGG | + | chr7_2:86143308-86143327 | Msa1085420:CDS | 40.0% | |
| ! | TAGGTTGGCTAGTTGTATGT+TGG | + | chr7_2:86143477-86143496 | Msa1085420:intron | 40.0% |
| TCAGACTGCTTAAGGTATGT+TGG | + | chr7_2:86143539-86143558 | Msa1085420:intron | 40.0% | |
| AAGGAACTTCTAGATGCACT+TGG | + | chr7_2:86143885-86143904 | Msa1085420:intron | 40.0% | |
| GTATTCAAAATGCGCTACCA+CGG | - | chr7_2:86144043-86144062 | None:intergenic | 40.0% | |
| TGGATGTGATTGGATGCTTA+TGG | - | chr7_2:86144065-86144084 | None:intergenic | 40.0% | |
| ATCCAATCACATCCATTGAG+TGG | + | chr7_2:86144070-86144089 | Msa1085420:CDS | 40.0% | |
| TACACCATCCACAGAATTGT+TGG | + | chr7_2:86144172-86144191 | Msa1085420:intron | 40.0% | |
| GAATTCGTCCAACAATTCTG+TGG | - | chr7_2:86144183-86144202 | None:intergenic | 40.0% | |
| !! | CTTTGGGTTTTACCCTTTCA+TGG | + | chr7_2:86144244-86144263 | Msa1085420:intron | 40.0% |
| !! | AGGAGCGTTTACTTGTTCTT+GGG | - | chr7_2:86144419-86144438 | None:intergenic | 40.0% |
| TGCTCAACAATGAGTACGTT+TGG | + | chr7_2:86144491-86144510 | Msa1085420:intron | 40.0% | |
| GCTCAACAATGAGTACGTTT+GGG | + | chr7_2:86144492-86144511 | Msa1085420:intron | 40.0% | |
| GCAGTACATACTATCATTCC+AGG | - | chr7_2:86144851-86144870 | None:intergenic | 40.0% | |
| ATAGTATGTACTGCAGCAGA+TGG | + | chr7_2:86144857-86144876 | Msa1085420:CDS | 40.0% | |
| ATAGCAGATACTGCCTTGTA+AGG | - | chr7_2:86144970-86144989 | None:intergenic | 40.0% | |
| TACAAGGCAGTATCTGCTAT+AGG | + | chr7_2:86144970-86144989 | Msa1085420:three_prime_UTR | 40.0% | |
| GGCATAACTTAGATTCAGGA+TGG | - | chr7_2:86145036-86145055 | None:intergenic | 40.0% | |
| !!! | AGTTGAGTGTTTTGAGATGG+TGG | + | chr7_2:86145153-86145172 | Msa1085420:three_prime_UTR | 40.0% |
| !!! | GTTGAGTGTTTTGAGATGGT+GGG | + | chr7_2:86145154-86145173 | Msa1085420:three_prime_UTR | 40.0% |
| ACCTTTGACAAACCTGTGAG+TGG | - | chr7_2:86139456-86139475 | None:intergenic | 45.0% | |
| TCTTCCAACTTATCCACACC+AGG | - | chr7_2:86139827-86139846 | None:intergenic | 45.0% | |
| TAGTCACTTGGGTAGCACTT+GGG | + | chr7_2:86140143-86140162 | Msa1085420:intron | 45.0% | |
| GCACTTGGGTGACATAGAAT+TGG | + | chr7_2:86140157-86140176 | Msa1085420:intron | 45.0% | |
| TACACCGACACAAGTGACTA+CGG | - | chr7_2:86140300-86140319 | None:intergenic | 45.0% | |
| CACTAGCAGATAGCATCACA+AGG | - | chr7_2:86140763-86140782 | None:intergenic | 45.0% | |
| TAATATGTTGCATGTGCCCC+AGG | + | chr7_2:86140909-86140928 | Msa1085420:intron | 45.0% | |
| !! | TGACTCTGAAATGGATGGTG+AGG | + | chr7_2:86141023-86141042 | Msa1085420:CDS | 45.0% |
| AGTGAAGACGAAGAAGAAGG+TGG | + | chr7_2:86141066-86141085 | Msa1085420:CDS | 45.0% | |
| TCTGTTCACACCTACAGTTG+CGG | + | chr7_2:86141195-86141214 | Msa1085420:intron | 45.0% | |
| TATTAACCGGATACGCTCCA+TGG | + | chr7_2:86141238-86141257 | Msa1085420:CDS | 45.0% | |
| GCCCAAGATGCACATATATG+GGG | - | chr7_2:86141272-86141291 | None:intergenic | 45.0% | |
| CTGCCCAAGATGCACATATA+TGG | - | chr7_2:86141274-86141293 | None:intergenic | 45.0% | |
| TTGGCTAAGGACCAGTCATA+GGG | - | chr7_2:86141328-86141347 | None:intergenic | 45.0% | |
| GTTGTGGCTGAATAGCACAA+AGG | + | chr7_2:86141664-86141683 | Msa1085420:intron | 45.0% | |
| AGAGCTTGGAATTGTAACGG+AGG | + | chr7_2:86141920-86141939 | Msa1085420:intron | 45.0% | |
| ! | TTGTAACGGAGGACTCGATT+TGG | + | chr7_2:86141931-86141950 | Msa1085420:intron | 45.0% |
| ! | TGTTGGTAGGTTCACAAGTC+AGG | - | chr7_2:86142256-86142275 | None:intergenic | 45.0% |
| ! | TATTTCTGCGGTTCCACAAC+AGG | + | chr7_2:86142289-86142308 | Msa1085420:intron | 45.0% |
| TATTATCTCCCGACCTGTTG+TGG | - | chr7_2:86142305-86142324 | None:intergenic | 45.0% | |
| TTTGCCCTTGGGTACAAATG+AGG | + | chr7_2:86142396-86142415 | Msa1085420:intron | 45.0% | |
| CCAAGGGCGAAAATTATACC+TGG | - | chr7_2:86142519-86142538 | None:intergenic | 45.0% | |
| ! | CCAGGTATAATTTTCGCCCT+TGG | + | chr7_2:86142516-86142535 | Msa1085420:intron | 45.0% |
| ATCAACTCCTTGGACACCTT+CGG | - | chr7_2:86142800-86142819 | None:intergenic | 45.0% | |
| GGCTTGTATCCGGTAATCAT+TGG | + | chr7_2:86142899-86142918 | Msa1085420:intron | 45.0% | |
| TTCCATGTTGCAGCAGATGT+AGG | - | chr7_2:86143056-86143075 | None:intergenic | 45.0% | |
| !! | CCGAAAAAGGTATTGCTTGG+CGG | - | chr7_2:86143143-86143162 | None:intergenic | 45.0% |
| ! | CCGCCAAGCAATACCTTTTT+CGG | + | chr7_2:86143140-86143159 | Msa1085420:intron | 45.0% |
| TGTTCAATGAACCCTTGCAG+TGG | + | chr7_2:86143233-86143252 | Msa1085420:intron | 45.0% | |
| !! | TGTTTTTGCTTCTTGCTCCG+TGG | + | chr7_2:86143273-86143292 | Msa1085420:CDS | 45.0% |
| !! | TGCGTCTTTTCAAGCACACA+AGG | + | chr7_2:86143342-86143361 | Msa1085420:CDS | 45.0% |
| TCGTGATCTCAGACTGCTTA+AGG | + | chr7_2:86143531-86143550 | Msa1085420:CDS | 45.0% | |
| TGAATAGGAAGGAGATTCCG+TGG | + | chr7_2:86144023-86144042 | Msa1085420:intron | 45.0% | |
| CTCCACTCAATGGATGTGAT+TGG | - | chr7_2:86144075-86144094 | None:intergenic | 45.0% | |
| TCCACACGAAGCTTCTTCAT+TGG | + | chr7_2:86144095-86144114 | Msa1085420:CDS | 45.0% | |
| TCGTCCAACAATTCTGTGGA+TGG | - | chr7_2:86144179-86144198 | None:intergenic | 45.0% | |
| !! | CAGGAGCGTTTACTTGTTCT+TGG | - | chr7_2:86144420-86144439 | None:intergenic | 45.0% |
| AAGACCCCAAAGAACTGCAT+TGG | + | chr7_2:86144813-86144832 | Msa1085420:CDS | 45.0% | |
| TGTGCCAATGCAGTTCTTTG+GGG | - | chr7_2:86144820-86144839 | None:intergenic | 45.0% | |
| GTGTGCCAATGCAGTTCTTT+GGG | - | chr7_2:86144821-86144840 | None:intergenic | 45.0% | |
| TGTGTGCCAATGCAGTTCTT+TGG | - | chr7_2:86144822-86144841 | None:intergenic | 45.0% | |
| GTGTATCATGCAGCTTCTGA+TGG | - | chr7_2:86144923-86144942 | None:intergenic | 45.0% | |
| ACCAACAACAAGCCACTCAC+AGG | + | chr7_2:86139441-86139460 | Msa1085420:five_prime_UTR | 50.0% | |
| !! | ACCTGTGAGTGGCTTGTTGT+TGG | - | chr7_2:86139445-86139464 | None:intergenic | 50.0% |
| GCCACTCACAGGTTTGTCAA+AGG | + | chr7_2:86139452-86139471 | Msa1085420:intron | 50.0% | |
| ACGGAGTGAATCATCTTCGG+CGG | + | chr7_2:86139766-86139785 | Msa1085420:CDS | 50.0% | |
| ! | CACACTTTTACCGGAACCTG+TGG | - | chr7_2:86139800-86139819 | None:intergenic | 50.0% |
| CACAGGTTCCGGTAAAAGTG+TGG | + | chr7_2:86139798-86139817 | Msa1085420:CDS | 50.0% | |
| ! | CCAGGTTGCCACACTTTTAC+CGG | - | chr7_2:86139809-86139828 | None:intergenic | 50.0% |
| ! | AAAAGTGTGGCAACCTGGTG+TGG | + | chr7_2:86139811-86139830 | Msa1085420:CDS | 50.0% |
| GCAACCTGGTGTGGATAAGT+TGG | + | chr7_2:86139820-86139839 | Msa1085420:CDS | 50.0% | |
| GTAGTCACTTGGGTAGCACT+TGG | + | chr7_2:86140142-86140161 | Msa1085420:intron | 50.0% | |
| GCCGATCACAATGTCACAAG+CGG | + | chr7_2:86140197-86140216 | Msa1085420:intron | 50.0% | |
| GCCGCTTGTGACATTGTGAT+CGG | - | chr7_2:86140201-86140220 | None:intergenic | 50.0% | |
| CTACCCGTAGTCACTTGTGT+CGG | + | chr7_2:86140293-86140312 | Msa1085420:intron | 50.0% | |
| ACACCGACACAAGTGACTAC+GGG | - | chr7_2:86140299-86140318 | None:intergenic | 50.0% | |
| ! | CTTGTGTCGGTGTAGTACAC+TGG | + | chr7_2:86140306-86140325 | Msa1085420:intron | 50.0% |
| CAAGAAGGTTTCTCAGCCTG+GGG | - | chr7_2:86140928-86140947 | None:intergenic | 50.0% | |
| CCAAGAAGGTTTCTCAGCCT+GGG | - | chr7_2:86140929-86140948 | None:intergenic | 50.0% | |
| TCCAAGAAGGTTTCTCAGCC+TGG | - | chr7_2:86140930-86140949 | None:intergenic | 50.0% | |
| ! | TGGTGAGGATAGTGATAGCG+AGG | + | chr7_2:86141038-86141057 | Msa1085420:CDS | 50.0% |
| TACCTGCAAAGTAGGACCAC+CGG | - | chr7_2:86141094-86141113 | None:intergenic | 50.0% | |
| !! | GAGGGTGTTACCTGCAAAGT+AGG | - | chr7_2:86141102-86141121 | None:intergenic | 50.0% |
| TTCACACCTACAGTTGCGGA+AGG | + | chr7_2:86141199-86141218 | Msa1085420:intron | 50.0% | |
| GAGTTACCTTCCGCAACTGT+AGG | - | chr7_2:86141208-86141227 | None:intergenic | 50.0% | |
| TTGCGGAAGGTAACTCACGA+AGG | + | chr7_2:86141212-86141231 | Msa1085420:CDS | 50.0% | |
| TTTGTGCCATGGAGCGTATC+CGG | - | chr7_2:86141247-86141266 | None:intergenic | 50.0% | |
| TGTGCATCTTGGGCAGAATC+TGG | + | chr7_2:86141278-86141297 | Msa1085420:CDS | 50.0% | |
| CTTGGCTAAGGACCAGTCAT+AGG | - | chr7_2:86141329-86141348 | None:intergenic | 50.0% | |
| ! | AAATCTGGGACATCAGCCCA+TGG | - | chr7_2:86141785-86141804 | None:intergenic | 50.0% |
| AGGTTCACAAGTCAGGTCGT+GGG | - | chr7_2:86142249-86142268 | None:intergenic | 50.0% | |
| TAGGTTCACAAGTCAGGTCG+TGG | - | chr7_2:86142250-86142269 | None:intergenic | 50.0% | |
| !! | CTAGCTCTGAACTTTGTCGG+AGG | - | chr7_2:86142328-86142347 | None:intergenic | 50.0% |
| TTCGCCCTTGGGTACAAATG+AGG | + | chr7_2:86142528-86142547 | Msa1085420:intron | 50.0% | |
| AGCGGCAGCTAAGGTTGTTA+AGG | + | chr7_2:86142612-86142631 | Msa1085420:intron | 50.0% | |
| GCGGCAGCTAAGGTTGTTAA+GGG | + | chr7_2:86142613-86142632 | Msa1085420:intron | 50.0% | |
| CTAGCAGAGACAGAAACCGA+AGG | + | chr7_2:86142781-86142800 | Msa1085420:CDS | 50.0% | |
| !! | ACAGAAACCGAAGGTGTCCA+AGG | + | chr7_2:86142790-86142809 | Msa1085420:CDS | 50.0% |
| CCTGAACTGCATCAACTCCT+TGG | - | chr7_2:86142810-86142829 | None:intergenic | 50.0% | |
| !! | CCAAGGAGTTGATGCAGTTC+AGG | + | chr7_2:86142807-86142826 | Msa1085420:CDS | 50.0% |
| ACTGGAGTCCTCTTGTTCCA+GGG | + | chr7_2:86142875-86142894 | Msa1085420:CDS | 50.0% | |
| AGCCTACATCTGCTGCAACA+TGG | + | chr7_2:86143051-86143070 | Msa1085420:CDS | 50.0% | |
| TATGGGATACTCGTTTGGGG+AGG | + | chr7_2:86143311-86143330 | Msa1085420:CDS | 50.0% | |
| TGTGCTTGAAAAGACGCAGC+TGG | - | chr7_2:86143340-86143359 | None:intergenic | 50.0% | |
| ! | GGCTAGTTGTATGTTGGCGT+CGG | + | chr7_2:86143483-86143502 | Msa1085420:CDS | 50.0% |
| GCTAGTTGTATGTTGGCGTC+GGG | + | chr7_2:86143484-86143503 | Msa1085420:CDS | 50.0% | |
| TTCGTGTGGACTCCACTCAA+TGG | - | chr7_2:86144085-86144104 | None:intergenic | 50.0% | |
| GCCAATGAAGAAGCTTCGTG+TGG | - | chr7_2:86144099-86144118 | None:intergenic | 50.0% | |
| GGTCCCATATTCTGTGGCAA+AGG | - | chr7_2:86144348-86144367 | None:intergenic | 50.0% | |
| TTTGGAAAGGGACGAGGAAG+AGG | + | chr7_2:86144372-86144391 | Msa1085420:CDS | 50.0% | |
| CATTGGCACACACAGATTCC+TGG | + | chr7_2:86144830-86144849 | Msa1085420:CDS | 50.0% | |
| TCATGCAGCTTCTGATGGCA+AGG | - | chr7_2:86144918-86144937 | None:intergenic | 50.0% | |
| GCAGATACTGCCTTGTAAGG+TGG | - | chr7_2:86144967-86144986 | None:intergenic | 50.0% | |
| GAGTGAATCATCTTCGGCGG+CGG | + | chr7_2:86139769-86139788 | Msa1085420:CDS | 55.0% | |
| ! | CCGGTAAAAGTGTGGCAACC+TGG | + | chr7_2:86139806-86139825 | Msa1085420:CDS | 55.0% |
| CCCAGGCTGAGAAACCTTCT+TGG | + | chr7_2:86140926-86140945 | Msa1085420:intron | 55.0% | |
| ! | TTCTGGGAAGAGACGTGAGC+TGG | + | chr7_2:86140981-86141000 | Msa1085420:CDS | 55.0% |
| GACGAAGAAGAAGGTGGTGC+CGG | + | chr7_2:86141072-86141091 | Msa1085420:CDS | 55.0% | |
| GGCAGAATCTGGTCATGTGC+AGG | + | chr7_2:86141289-86141308 | Msa1085420:CDS | 55.0% | |
| TCTGCGGTTCCACAACAGGT+CGG | + | chr7_2:86142293-86142312 | Msa1085420:intron | 55.0% | |
| GACTGGAGTCCTCTTGTTCC+AGG | + | chr7_2:86142874-86142893 | Msa1085420:CDS | 55.0% | |
| ACAAGCCTCCCTGGAACAAG+AGG | - | chr7_2:86142886-86142905 | None:intergenic | 55.0% | |
| GTTCCAGGGAGGCTTGTATC+CGG | + | chr7_2:86142889-86142908 | Msa1085420:CDS | 55.0% | |
| TTACCGGATACAAGCCTCCC+TGG | - | chr7_2:86142895-86142914 | None:intergenic | 55.0% | |
| TCTGTAGGGCTCCACTGCAA+GGG | - | chr7_2:86143247-86143266 | None:intergenic | 55.0% | |
| TTCTGTAGGGCTCCACTGCA+AGG | - | chr7_2:86143248-86143267 | None:intergenic | 55.0% | |
| ! | TTGGCGTCGGGTAGTGATGA+TGG | + | chr7_2:86143496-86143515 | Msa1085420:CDS | 55.0% |
| ! | TGGCGTCGGGTAGTGATGAT+GGG | + | chr7_2:86143497-86143516 | Msa1085420:CDS | 55.0% |
| AGTTGGGGAGGCAGATCTTC+AGG | - | chr7_2:86144439-86144458 | None:intergenic | 55.0% | |
| TGAATCATCTTCGGCGGCGG+CGG | + | chr7_2:86139772-86139791 | Msa1085420:CDS | 60.0% | |
| ! | GAAGAAGAAGGTGGTGCCGG+TGG | + | chr7_2:86141075-86141094 | Msa1085420:CDS | 60.0% |
| TGCCGGTGGTCCTACTTTGC+AGG | + | chr7_2:86141089-86141108 | Msa1085420:CDS | 60.0% | |
| CTGCGGTTCCACAACAGGTC+GGG | + | chr7_2:86142294-86142313 | Msa1085420:intron | 60.0% | |
| GGAGTCCTCTTGTTCCAGGG+AGG | + | chr7_2:86142878-86142897 | Msa1085420:CDS | 60.0% | |
| GGAAAGGGACGAGGAAGAGG+AGG | + | chr7_2:86144375-86144394 | Msa1085420:CDS | 60.0% | |
| ! | GGCGGCGGCGCCACAGGTTC+CGG | + | chr7_2:86139787-86139806 | Msa1085420:CDS | 80.0% |
| ! | TTCGGCGGCGGCGGCGCCAC+AGG | + | chr7_2:86139781-86139800 | Msa1085420:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86139369 | 86145316 | 86139369 | ID=Msa1085420;Name=Msa1085420 |
| chr7_2 | mRNA | 86139369 | 86145316 | 86139369 | ID=Msa1085420-mRNA-1;Parent=Msa1085420;Name=Msa1085420-mRNA-1;_AED=0.10;_eAED=0.10;_QI=112|1|1|1|0.91|0.84|13|379|469 |
| chr7_2 | exon | 86139369 | 86139462 | 86139369 | ID=Msa1085420-mRNA-1:exon:23288;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86139590 | 86139655 | 86139590 | ID=Msa1085420-mRNA-1:exon:23289;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86139764 | 86139921 | 86139764 | ID=Msa1085420-mRNA-1:exon:23290;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86140473 | 86140551 | 86140473 | ID=Msa1085420-mRNA-1:exon:23291;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86140931 | 86141110 | 86140931 | ID=Msa1085420-mRNA-1:exon:23292;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86141212 | 86141310 | 86141212 | ID=Msa1085420-mRNA-1:exon:23293;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86142751 | 86142910 | 86142751 | ID=Msa1085420-mRNA-1:exon:23294;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86143021 | 86143127 | 86143021 | ID=Msa1085420-mRNA-1:exon:23295;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86143253 | 86143392 | 86143253 | ID=Msa1085420-mRNA-1:exon:23296;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86143480 | 86143552 | 86143480 | ID=Msa1085420-mRNA-1:exon:23297;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86144030 | 86144145 | 86144030 | ID=Msa1085420-mRNA-1:exon:23298;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86144357 | 86144474 | 86144357 | ID=Msa1085420-mRNA-1:exon:23299;Parent=Msa1085420-mRNA-1 |
| chr7_2 | exon | 86144806 | 86145316 | 86144806 | ID=Msa1085420-mRNA-1:exon:23300;Parent=Msa1085420-mRNA-1 |
| chr7_2 | five_prime_UTR | 86139369 | 86139462 | 86139369 | ID=Msa1085420-mRNA-1:five_prime_utr;Parent=Msa1085420-mRNA-1 |
| chr7_2 | five_prime_UTR | 86139590 | 86139607 | 86139590 | ID=Msa1085420-mRNA-1:five_prime_utr;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86139608 | 86139655 | 86139608 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86139764 | 86139921 | 86139764 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86140473 | 86140551 | 86140473 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86140931 | 86141110 | 86140931 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86141212 | 86141310 | 86141212 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86142751 | 86142910 | 86142751 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86143021 | 86143127 | 86143021 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86143253 | 86143392 | 86143253 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86143480 | 86143552 | 86143480 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86144030 | 86144145 | 86144030 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86144357 | 86144474 | 86144357 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | CDS | 86144806 | 86144937 | 86144806 | ID=Msa1085420-mRNA-1:cds;Parent=Msa1085420-mRNA-1 |
| chr7_2 | three_prime_UTR | 86144938 | 86145316 | 86144938 | ID=Msa1085420-mRNA-1:three_prime_utr;Parent=Msa1085420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
