Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698780 | XP_003608501.1 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 6.42e-104 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698780 | sp|O22584|RS14_LUPLU | 94.928 | 138 | 7 | 0 | 3 | 140 | 2 | 139 | 1.49e-91 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698780 | B7FGP1 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 3.07e-104 | 303 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0698780 | 0.819987 | 8.701064e-53 | -8.615850e-47 |
| Msa0002750 | Msa0698780 | 0.858719 | 6.790881e-63 | -8.615850e-47 |
| Msa0002790 | Msa0698780 | 0.854950 | 8.749453e-62 | -8.615850e-47 |
| Msa0003780 | Msa0698780 | 0.865840 | 4.409470e-65 | -8.615850e-47 |
| Msa0027260 | Msa0698780 | 0.859302 | 4.542912e-63 | -8.615850e-47 |
| Msa0029630 | Msa0698780 | 0.810296 | 1.237197e-50 | -8.615850e-47 |
| Msa0032780 | Msa0698780 | 0.847479 | 1.127150e-59 | -8.615850e-47 |
| Msa0032810 | Msa0698780 | 0.834982 | 2.186936e-56 | -8.615850e-47 |
| Msa0037250 | Msa0698780 | 0.868654 | 5.561419e-66 | -8.615850e-47 |
| Msa0040690 | Msa0698780 | 0.823468 | 1.362748e-53 | -8.615850e-47 |
| Msa0042280 | Msa0698780 | 0.835379 | 1.736707e-56 | -8.615850e-47 |
| Msa0045730 | Msa0698780 | 0.827616 | 1.418212e-54 | -8.615850e-47 |
| Msa0047160 | Msa0698780 | 0.847483 | 1.124078e-59 | -8.615850e-47 |
| Msa0048180 | Msa0698780 | 0.869734 | 2.479103e-66 | -8.615850e-47 |
| Msa0049370 | Msa0698780 | 0.848363 | 6.430481e-60 | -8.615850e-47 |
| Msa0055180 | Msa0698780 | 0.858924 | 5.895901e-63 | -8.615850e-47 |
| Msa0055190 | Msa0698780 | 0.830214 | 3.331428e-55 | -8.615850e-47 |
| Msa0056430 | Msa0698780 | 0.821464 | 3.981229e-53 | -8.615850e-47 |
| Msa0056470 | Msa0698780 | 0.897892 | 9.044014e-77 | -8.615850e-47 |
| Msa0072420 | Msa0698780 | 0.857999 | 1.113121e-62 | -8.615850e-47 |
| Msa0074030 | Msa0698780 | 0.822804 | 1.946662e-53 | -8.615850e-47 |
| Msa0086750 | Msa0698780 | 0.868016 | 8.926153e-66 | -8.615850e-47 |
| Msa0090520 | Msa0698780 | 0.831408 | 1.698241e-55 | -8.615850e-47 |
| Msa0094470 | Msa0698780 | 0.851633 | 7.816662e-61 | -8.615850e-47 |
| Msa0100730 | Msa0698780 | 0.823986 | 1.030812e-53 | -8.615850e-47 |
| Msa0100740 | Msa0698780 | 0.850655 | 1.475767e-60 | -8.615850e-47 |
| Msa0105370 | Msa0698780 | 0.804724 | 1.882908e-49 | -8.615850e-47 |
| Msa0114870 | Msa0698780 | 0.824235 | 9.008070e-54 | -8.615850e-47 |
| Msa0115870 | Msa0698780 | 0.816923 | 4.305665e-52 | -8.615850e-47 |
| Msa0116130 | Msa0698780 | 0.814706 | 1.343827e-51 | -8.615850e-47 |
| Msa0116670 | Msa0698780 | 0.825526 | 4.467432e-54 | -8.615850e-47 |
| Msa0602920 | Msa0698780 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0603320 | Msa0698780 | 0.808463 | 3.059111e-50 | -8.615850e-47 |
| Msa0607690 | Msa0698780 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
| Msa0608320 | Msa0698780 | 0.820011 | 8.592057e-53 | -8.615850e-47 |
| Msa0610550 | Msa0698780 | 0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0615440 | Msa0698780 | 0.815031 | 1.138411e-51 | -8.615850e-47 |
| Msa0615580 | Msa0698780 | 0.896818 | 2.560550e-76 | -8.615850e-47 |
| Msa0615990 | Msa0698780 | 0.817019 | 4.097513e-52 | -8.615850e-47 |
| Msa0616870 | Msa0698780 | -0.806836 | 6.779380e-50 | -8.615850e-47 |
| Msa0617540 | Msa0698780 | 0.812506 | 4.097099e-51 | -8.615850e-47 |
| Msa0620890 | Msa0698780 | 0.845485 | 3.944346e-59 | -8.615850e-47 |
| Msa0622750 | Msa0698780 | 0.838277 | 3.164274e-57 | -8.615850e-47 |
| Msa0623200 | Msa0698780 | 0.844871 | 5.778094e-59 | -8.615850e-47 |
| Msa0628410 | Msa0698780 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0631250 | Msa0698780 | 0.824550 | 7.595838e-54 | -8.615850e-47 |
| Msa0634890 | Msa0698780 | 0.833166 | 6.233651e-56 | -8.615850e-47 |
| Msa0651050 | Msa0698780 | 0.806651 | 7.418245e-50 | -8.615850e-47 |
| Msa0661300 | Msa0698780 | 0.906003 | 2.359746e-80 | -8.615850e-47 |
| Msa0664560 | Msa0698780 | 0.824419 | 8.154568e-54 | -8.615850e-47 |
| Msa0666230 | Msa0698780 | 0.857650 | 1.412697e-62 | -8.615850e-47 |
| Msa0666560 | Msa0698780 | -0.831301 | 1.804195e-55 | -8.615850e-47 |
| Msa0669520 | Msa0698780 | 0.845152 | 4.852314e-59 | -8.615850e-47 |
| Msa0672100 | Msa0698780 | 0.804170 | 2.456953e-49 | -8.615850e-47 |
| Msa0692940 | Msa0698780 | 0.806427 | 8.271870e-50 | -8.615850e-47 |
| Msa0693210 | Msa0698780 | 0.801614 | 8.285755e-49 | -8.615850e-47 |
| Msa0698490 | Msa0698780 | 0.818029 | 2.426257e-52 | -8.615850e-47 |
| Msa0698660 | Msa0698780 | 0.811524 | 6.707715e-51 | -8.615850e-47 |
| Msa0698780 | Msa0708000 | -0.808643 | 2.799972e-50 | -8.615850e-47 |
| Msa0698780 | Msa0712610 | 0.801520 | 8.663608e-49 | -8.615850e-47 |
| Msa0698780 | Msa0729200 | 0.829530 | 4.889325e-55 | -8.615850e-47 |
| Msa0698780 | Msa0766080 | 0.815055 | 1.124573e-51 | -8.615850e-47 |
| Msa0698780 | Msa0769590 | 0.837598 | 4.729245e-57 | -8.615850e-47 |
| Msa0698780 | Msa0781080 | 0.804783 | 1.830294e-49 | -8.615850e-47 |
| Msa0698780 | Msa0785130 | 0.848160 | 7.316120e-60 | -8.615850e-47 |
| Msa0698780 | Msa0788850 | 0.815430 | 9.283037e-52 | -8.615850e-47 |
| Msa0698780 | Msa0792760 | 0.851257 | 9.985142e-61 | -8.615850e-47 |
| Msa0698780 | Msa0800370 | 0.804362 | 2.240119e-49 | -8.615850e-47 |
| Msa0698780 | Msa0806880 | 0.862296 | 5.603400e-64 | -8.615850e-47 |
| Msa0698780 | Msa0808800 | 0.853504 | 2.287949e-61 | -8.615850e-47 |
| Msa0698780 | Msa0817540 | 0.836690 | 8.072047e-57 | -8.615850e-47 |
| Msa0698780 | Msa0830090 | 0.823420 | 1.398314e-53 | -8.615850e-47 |
| Msa0698780 | Msa0835420 | 0.807998 | 3.842762e-50 | -8.615850e-47 |
| Msa0698780 | Msa0867060 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0698780 | Msa0876170 | 0.808916 | 2.447507e-50 | -8.615850e-47 |
| Msa0698780 | Msa0881270 | 0.830466 | 2.891167e-55 | -8.615850e-47 |
| Msa0698780 | Msa0881290 | 0.879869 | 8.757971e-70 | -8.615850e-47 |
| Msa0698780 | Msa0888810 | 0.834334 | 3.183723e-56 | -8.615850e-47 |
| Msa0698780 | Msa0902760 | 0.802847 | 4.619205e-49 | -8.615850e-47 |
| Msa0698780 | Msa0953310 | 0.881343 | 2.597774e-70 | -8.615850e-47 |
| Msa0698780 | Msa0958000 | 0.822001 | 2.991735e-53 | -8.615850e-47 |
| Msa0698780 | Msa0968590 | 0.809859 | 1.536710e-50 | -8.615850e-47 |
| Msa0698780 | Msa1006840 | 0.860280 | 2.306452e-63 | -8.615850e-47 |
| Msa0698780 | Msa1010310 | 0.816267 | 6.040338e-52 | -8.615850e-47 |
| Msa0698780 | Msa1012740 | 0.806515 | 7.925177e-50 | -8.615850e-47 |
| Msa0698780 | Msa1013400 | 0.804418 | 2.181326e-49 | -8.615850e-47 |
| Msa0698780 | Msa1019240 | 0.866491 | 2.742294e-65 | -8.615850e-47 |
| Msa0698780 | Msa1019260 | 0.878444 | 2.795793e-69 | -8.615850e-47 |
| Msa0698780 | Msa1021470 | 0.882268 | 1.201052e-70 | -8.615850e-47 |
| Msa0698780 | Msa1021520 | 0.848941 | 4.446657e-60 | -8.615850e-47 |
| Msa0698780 | Msa1039520 | 0.859193 | 4.900054e-63 | -8.615850e-47 |
| Msa0698780 | Msa1039900 | 0.822457 | 2.345005e-53 | -8.615850e-47 |
| Msa0698780 | Msa1042780 | 0.810753 | 9.854332e-51 | -8.615850e-47 |
| Msa0698780 | Msa1043690 | 0.816438 | 5.530192e-52 | -8.615850e-47 |
| Msa0698780 | Msa1051880 | 0.832808 | 7.650503e-56 | -8.615850e-47 |
| Msa0698780 | Msa1060230 | 0.815593 | 8.539291e-52 | -8.615850e-47 |
| Msa0698780 | Msa1060260 | 0.860441 | 2.061313e-63 | -8.615850e-47 |
| Msa0698780 | Msa1072710 | 0.854154 | 1.487179e-61 | -8.615850e-47 |
| Msa0698780 | Msa1080290 | 0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0698780 | Msa1080350 | 0.817239 | 3.655945e-52 | -8.615850e-47 |
| Msa0698780 | Msa1081150 | 0.821415 | 4.087041e-53 | -8.615850e-47 |
| Msa0698780 | Msa1081930 | 0.860766 | 1.643140e-63 | -8.615850e-47 |
| Msa0698780 | Msa1085420 | 0.819917 | 9.030360e-53 | -8.615850e-47 |
| Msa0698780 | Msa1088490 | 0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa0698780 | Msa1093530 | 0.804005 | 2.658978e-49 | -8.615850e-47 |
| Msa0698780 | Msa1104140 | 0.862404 | 5.190003e-64 | -8.615850e-47 |
| Msa0698780 | Msa1104210 | 0.873829 | 1.085673e-67 | -8.615850e-47 |
| Msa0698780 | Msa1121680 | 0.807632 | 4.597854e-50 | -8.615850e-47 |
| Msa0698780 | Msa1122310 | -0.816349 | 5.790966e-52 | -8.615850e-47 |
| Msa0698780 | Msa1125860 | 0.824383 | 8.317483e-54 | -8.615850e-47 |
| Msa0698780 | Msa1126060 | 0.821890 | 3.173889e-53 | -8.615850e-47 |
| Msa0698780 | Msa1126510 | 0.837389 | 5.349919e-57 | -8.615850e-47 |
| Msa0698780 | Msa1126830 | 0.895845 | 6.502942e-76 | -8.615850e-47 |
| Msa0698780 | Msa1148910 | 0.852251 | 5.219823e-61 | -8.615850e-47 |
| Msa0698780 | Msa1165270 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa0698780 | Msa1165780 | 0.879993 | 7.915185e-70 | -8.615850e-47 |
| Msa0698780 | Msa1165940 | 0.876200 | 1.686259e-68 | -8.615850e-47 |
| Msa0698780 | Msa1166860 | 0.840904 | 6.563637e-58 | -8.615850e-47 |
| Msa0698780 | Msa1166870 | 0.833551 | 4.997129e-56 | -8.615850e-47 |
| Msa0698780 | Msa1175350 | 0.844803 | 6.027341e-59 | -8.615850e-47 |
| Msa0698780 | Msa1195300 | 0.802882 | 4.542395e-49 | -8.615850e-47 |
| Msa0698780 | Msa1208020 | 0.855382 | 6.547995e-62 | -8.615850e-47 |
| Msa0698780 | Msa1209200 | 0.830933 | 2.221945e-55 | -8.615850e-47 |
| Msa0698780 | Msa1215820 | 0.851740 | 7.291087e-61 | -8.615850e-47 |
| Msa0698780 | Msa1218600 | 0.809882 | 1.518598e-50 | -8.615850e-47 |
| Msa0698780 | Msa1230580 | 0.838545 | 2.697957e-57 | -8.615850e-47 |
| Msa0698780 | Msa1254730 | 0.830389 | 3.018527e-55 | -8.615850e-47 |
| Msa0698780 | Msa1256840 | 0.811078 | 8.381631e-51 | -8.615850e-47 |
| Msa0698780 | Msa1257510 | 0.843116 | 1.708072e-58 | -8.615850e-47 |
| Msa0698780 | Msa1262890 | 0.829234 | 5.769370e-55 | -8.615850e-47 |
| Msa0698780 | Msa1264210 | 0.818666 | 1.740224e-52 | -8.615850e-47 |
| Msa0698780 | Msa1265630 | 0.852322 | 4.982420e-61 | -8.615850e-47 |
| Msa0698780 | Msa1269790 | 0.844803 | 6.027341e-59 | -8.615850e-47 |
| Msa0698780 | Msa1273340 | 0.820826 | 5.586825e-53 | -8.615850e-47 |
| Msa0698780 | Msa1275680 | 0.812264 | 4.626945e-51 | -8.615850e-47 |
| Msa0698780 | Msa1277260 | 0.814550 | 1.455187e-51 | -8.615850e-47 |
| Msa0698780 | Msa1296830 | 0.814854 | 1.246492e-51 | -8.615850e-47 |
| Msa0698780 | Msa1299590 | 0.872008 | 4.423426e-67 | -8.615850e-47 |
| Msa0698780 | Msa1305050 | 0.811741 | 6.014468e-51 | -8.615850e-47 |
| Msa0698780 | Msa1315890 | 0.863120 | 3.123367e-64 | -8.615850e-47 |
| Msa0698780 | Msa1329100 | -0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa0698780 | Msa1331250 | 0.814227 | 1.714973e-51 | -8.615850e-47 |
| Msa0698780 | Msa1332250 | 0.823797 | 1.141490e-53 | -8.615850e-47 |
| Msa0698780 | Msa1332590 | 0.816470 | 5.440869e-52 | -8.615850e-47 |
| Msa0698780 | Msa1336560 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0698780 | Msa1338190 | 0.875038 | 4.221106e-68 | -8.615850e-47 |
| Msa0698780 | Msa1341060 | 0.838810 | 2.305411e-57 | -8.615850e-47 |
| Msa0698780 | Msa1343260 | 0.877048 | 8.586538e-69 | -8.615850e-47 |
| Msa0698780 | Msa1343290 | 0.830302 | 3.170275e-55 | -8.615850e-47 |
| Msa0698780 | Msa1349570 | 0.816525 | 5.287892e-52 | -8.615850e-47 |
| Msa0698780 | Msa1351540 | 0.830207 | 3.345121e-55 | -8.615850e-47 |
| Msa0698780 | Msa1356790 | 0.808816 | 2.572028e-50 | -8.615850e-47 |
| Msa0698780 | Msa1360140 | 0.802471 | 5.523158e-49 | -8.615850e-47 |
| Msa0698780 | Msa1362210 | 0.830583 | 2.706541e-55 | -8.615850e-47 |
| Msa0698780 | Msa1362790 | 0.861579 | 9.288708e-64 | -8.615850e-47 |
| Msa0698780 | Msa1363330 | 0.846094 | 2.694451e-59 | -8.615850e-47 |
| Msa0698780 | Msa1364480 | 0.843661 | 1.221455e-58 | -8.615850e-47 |
| Msa0698780 | Msa1365140 | 0.846466 | 2.134231e-59 | -8.615850e-47 |
| Msa0698780 | Msa1365800 | 0.801599 | 8.346083e-49 | -8.615850e-47 |
| Msa0698780 | Msa1366180 | 0.814628 | 1.398412e-51 | -8.615850e-47 |
| Msa0698780 | Msa1368120 | 0.805230 | 1.475770e-49 | -8.615850e-47 |
| Msa0698780 | Msa1369190 | 0.855121 | 7.802340e-62 | -8.615850e-47 |
| Msa0698780 | Msa1374120 | 0.835734 | 1.412143e-56 | -8.615850e-47 |
| Msa0698780 | Msa1376650 | 0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0698780 | Msa1379760 | 0.855984 | 4.371573e-62 | -8.615850e-47 |
| Msa0698780 | Msa1386600 | 0.847137 | 1.398495e-59 | -8.615850e-47 |
| Msa0698780 | Msa1394290 | 0.841425 | 4.790795e-58 | -8.615850e-47 |
| Msa0698780 | Msa1399530 | 0.834257 | 3.328182e-56 | -8.615850e-47 |
| Msa0698780 | Msa1411970 | 0.819312 | 1.240785e-52 | -8.615850e-47 |
| Msa0698780 | Msa1413260 | 0.861116 | 1.286068e-63 | -8.615850e-47 |
| Msa0698780 | Msa1413500 | 0.857819 | 1.258960e-62 | -8.615850e-47 |
| Msa0698780 | Msa1420430 | 0.807268 | 5.492446e-50 | -8.615850e-47 |
| Msa0698780 | Msa1425670 | 0.857783 | 1.289652e-62 | -8.615850e-47 |
| Msa0698780 | Msa1428880 | 0.809837 | 1.553557e-50 | -8.615850e-47 |
| Msa0698780 | Msa1432700 | 0.806646 | 7.436710e-50 | -8.615850e-47 |
| Msa0698780 | Msa1433310 | 0.816049 | 6.756940e-52 | -8.615850e-47 |
| Msa0698780 | Msa1435390 | 0.837108 | 6.313110e-57 | -8.615850e-47 |
| Msa0698780 | Msa1437860 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
| Msa0698780 | Msa1445370 | 0.807322 | 5.349191e-50 | -8.615850e-47 |
| Msa0698780 | Msa1448690 | 0.810060 | 1.390694e-50 | -8.615850e-47 |
| Msa0698780 | Msa1450280 | 0.847858 | 8.863829e-60 | -8.615850e-47 |
| Msa0698780 | Msa1456050 | 0.899266 | 2.349035e-77 | -8.615850e-47 |
| Msa0698780 | Msa1457920 | 0.804200 | 2.421687e-49 | -8.615850e-47 |
| Msa0698780 | Msa1462860 | 0.805738 | 1.154994e-49 | -8.615850e-47 |
| Msa0698780 | Msa1465260 | 0.808818 | 2.568840e-50 | -8.615850e-47 |
| Msa0125450 | Msa0698780 | 0.821673 | 3.562139e-53 | -8.615850e-47 |
| Msa0125540 | Msa0698780 | 0.814336 | 1.622810e-51 | -8.615850e-47 |
| Msa0128860 | Msa0698780 | 0.861127 | 1.276213e-63 | -8.615850e-47 |
| Msa0133540 | Msa0698780 | 0.838976 | 2.087998e-57 | -8.615850e-47 |
| Msa0137990 | Msa0698780 | 0.830406 | 2.989513e-55 | -8.615850e-47 |
| Msa0140650 | Msa0698780 | 0.803634 | 3.173865e-49 | -8.615850e-47 |
| Msa0140820 | Msa0698780 | 0.884045 | 2.680698e-71 | -8.615850e-47 |
| Msa0140850 | Msa0698780 | 0.882209 | 1.261840e-70 | -8.615850e-47 |
| Msa0146340 | Msa0698780 | 0.868562 | 5.955197e-66 | -8.615850e-47 |
| Msa0149190 | Msa0698780 | 0.809263 | 2.063200e-50 | -8.615850e-47 |
| Msa0149200 | Msa0698780 | 0.849751 | 2.645263e-60 | -8.615850e-47 |
| Msa0150300 | Msa0698780 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0167480 | Msa0698780 | 0.811583 | 6.511925e-51 | -8.615850e-47 |
| Msa0172900 | Msa0698780 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0173530 | Msa0698780 | 0.826185 | 3.116614e-54 | -8.615850e-47 |
| Msa0174730 | Msa0698780 | 0.861680 | 8.653029e-64 | -8.615850e-47 |
| Msa0177960 | Msa0698780 | 0.826930 | 2.069570e-54 | -8.615850e-47 |
| Msa0178950 | Msa0698780 | 0.814521 | 1.476723e-51 | -8.615850e-47 |
| Msa0180020 | Msa0698780 | 0.812052 | 5.147788e-51 | -8.615850e-47 |
| Msa0181490 | Msa0698780 | 0.824725 | 6.907747e-54 | -8.615850e-47 |
| Msa0183090 | Msa0698780 | 0.809437 | 1.893371e-50 | -8.615850e-47 |
| Msa0183900 | Msa0698780 | 0.829173 | 5.968227e-55 | -8.615850e-47 |
| Msa0187930 | Msa0698780 | 0.813953 | 1.971742e-51 | -8.615850e-47 |
| Msa0188350 | Msa0698780 | 0.826929 | 2.071426e-54 | -8.615850e-47 |
| Msa0189700 | Msa0698780 | 0.879960 | 8.130626e-70 | -8.615850e-47 |
| Msa0194540 | Msa0698780 | 0.803769 | 2.975871e-49 | -8.615850e-47 |
| Msa0199880 | Msa0698780 | 0.843729 | 1.171358e-58 | -8.615850e-47 |
| Msa0204960 | Msa0698780 | 0.815297 | 9.937415e-52 | -8.615850e-47 |
| Msa0207670 | Msa0698780 | 0.813365 | 2.656085e-51 | -8.615850e-47 |
| Msa0209350 | Msa0698780 | 0.835504 | 1.615134e-56 | -8.615850e-47 |
| Msa0209500 | Msa0698780 | 0.804993 | 1.654115e-49 | -8.615850e-47 |
| Msa0218720 | Msa0698780 | 0.827148 | 1.835524e-54 | -8.615850e-47 |
| Msa0218830 | Msa0698780 | 0.819757 | 9.823486e-53 | -8.615850e-47 |
| Msa0219120 | Msa0698780 | 0.803292 | 3.737902e-49 | -8.615850e-47 |
| Msa0221030 | Msa0698780 | 0.812089 | 5.052248e-51 | -8.615850e-47 |
| Msa0229150 | Msa0698780 | 0.860665 | 1.762961e-63 | -8.615850e-47 |
| Msa0230490 | Msa0698780 | 0.888945 | 3.762520e-73 | -8.615850e-47 |
| Msa0230520 | Msa0698780 | 0.840728 | 7.300319e-58 | -8.615850e-47 |
| Msa0231100 | Msa0698780 | 0.850602 | 1.527178e-60 | -8.615850e-47 |
| Msa0232010 | Msa0698780 | 0.883267 | 5.183733e-71 | -8.615850e-47 |
| Msa0232080 | Msa0698780 | 0.886991 | 2.110431e-72 | -8.615850e-47 |
| Msa0366890 | Msa0698780 | 0.839371 | 1.648927e-57 | -8.615850e-47 |
| Msa0369450 | Msa0698780 | 0.895812 | 6.715357e-76 | -8.615850e-47 |
| Msa0374930 | Msa0698780 | 0.800695 | 1.277591e-48 | -8.615850e-47 |
| Msa0375310 | Msa0698780 | 0.815270 | 1.007477e-51 | -8.615850e-47 |
| Msa0380300 | Msa0698780 | 0.829990 | 3.778603e-55 | -8.615850e-47 |
| Msa0385500 | Msa0698780 | 0.831441 | 1.666816e-55 | -8.615850e-47 |
| Msa0390030 | Msa0698780 | 0.812872 | 3.406263e-51 | -8.615850e-47 |
| Msa0393370 | Msa0698780 | 0.823362 | 1.442597e-53 | -8.615850e-47 |
| Msa0395820 | Msa0698780 | 0.807672 | 4.508458e-50 | -8.615850e-47 |
| Msa0395890 | Msa0698780 | 0.829032 | 6.457147e-55 | -8.615850e-47 |
| Msa0414800 | Msa0698780 | 0.844184 | 8.847669e-59 | -8.615850e-47 |
| Msa0418270 | Msa0698780 | 0.804760 | 1.850460e-49 | -8.615850e-47 |
| Msa0421500 | Msa0698780 | 0.816351 | 5.784567e-52 | -8.615850e-47 |
| Msa0423750 | Msa0698780 | 0.849178 | 3.821379e-60 | -8.615850e-47 |
| Msa0425410 | Msa0698780 | 0.807478 | 4.956434e-50 | -8.615850e-47 |
| Msa0426580 | Msa0698780 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0427150 | Msa0698780 | 0.881721 | 1.897305e-70 | -8.615850e-47 |
| Msa0432210 | Msa0698780 | 0.805211 | 1.489274e-49 | -8.615850e-47 |
| Msa0436720 | Msa0698780 | 0.800912 | 1.153770e-48 | -8.615850e-47 |
| Msa0443390 | Msa0698780 | 0.885893 | 5.487532e-72 | -8.615850e-47 |
| Msa0458060 | Msa0698780 | 0.815901 | 7.288559e-52 | -8.615850e-47 |
| Msa0471440 | Msa0698780 | 0.804777 | 1.835552e-49 | -8.615850e-47 |
| Msa0482650 | Msa0698780 | 0.810114 | 1.353756e-50 | -8.615850e-47 |
| Msa0242410 | Msa0698780 | 0.806185 | 9.301255e-50 | -8.615850e-47 |
| Msa0244780 | Msa0698780 | 0.816131 | 6.477648e-52 | -8.615850e-47 |
| Msa0250820 | Msa0698780 | 0.827910 | 1.205044e-54 | -8.615850e-47 |
| Msa0257450 | Msa0698780 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0258390 | Msa0698780 | 0.807905 | 4.022277e-50 | -8.615850e-47 |
| Msa0258850 | Msa0698780 | 0.832153 | 1.111750e-55 | -8.615850e-47 |
| Msa0262480 | Msa0698780 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
| Msa0264010 | Msa0698780 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0265430 | Msa0698780 | 0.828822 | 7.258636e-55 | -8.615850e-47 |
| Msa0268130 | Msa0698780 | 0.810841 | 9.432214e-51 | -8.615850e-47 |
| Msa0275080 | Msa0698780 | 0.801459 | 8.914082e-49 | -8.615850e-47 |
| Msa0280610 | Msa0698780 | 0.815317 | 9.834951e-52 | -8.615850e-47 |
| Msa0281530 | Msa0698780 | 0.844007 | 9.865787e-59 | -8.615850e-47 |
| Msa0289580 | Msa0698780 | 0.844010 | 9.850457e-59 | -8.615850e-47 |
| Msa0289610 | Msa0698780 | 0.841890 | 3.610445e-58 | -8.615850e-47 |
| Msa0296250 | Msa0698780 | 0.800370 | 1.488064e-48 | -8.615850e-47 |
| Msa0298200 | Msa0698780 | 0.819655 | 1.036489e-52 | -8.615850e-47 |
| Msa0298990 | Msa0698780 | 0.815344 | 9.702322e-52 | -8.615850e-47 |
| Msa0300350 | Msa0698780 | 0.810797 | 9.641536e-51 | -8.615850e-47 |
| Msa0304590 | Msa0698780 | 0.810558 | 1.086135e-50 | -8.615850e-47 |
| Msa0304660 | Msa0698780 | 0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0306690 | Msa0698780 | 0.826492 | 2.633312e-54 | -8.615850e-47 |
| Msa0310030 | Msa0698780 | 0.821920 | 3.123151e-53 | -8.615850e-47 |
| Msa0317910 | Msa0698780 | 0.895573 | 8.430502e-76 | -8.615850e-47 |
| Msa0319640 | Msa0698780 | 0.806591 | 7.634791e-50 | -8.615850e-47 |
| Msa0320590 | Msa0698780 | 0.835216 | 1.908780e-56 | -8.615850e-47 |
| Msa0327300 | Msa0698780 | 0.827584 | 1.443113e-54 | -8.615850e-47 |
| Msa0327330 | Msa0698780 | 0.869722 | 2.502663e-66 | -8.615850e-47 |
| Msa0331700 | Msa0698780 | 0.806074 | 9.814927e-50 | -8.615850e-47 |
| Msa0336010 | Msa0698780 | 0.896019 | 5.508688e-76 | -8.615850e-47 |
| Msa0337670 | Msa0698780 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
| Msa0340380 | Msa0698780 | 0.824854 | 6.441457e-54 | -8.615850e-47 |
| Msa0348830 | Msa0698780 | 0.901131 | 3.651489e-78 | -8.615850e-47 |
| Msa0355680 | Msa0698780 | 0.809439 | 1.891115e-50 | -8.615850e-47 |
| Msa0357900 | Msa0698780 | 0.840460 | 8.583084e-58 | -8.615850e-47 |
| Msa0483110 | Msa0698780 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
| Msa0513990 | Msa0698780 | 0.804550 | 2.047130e-49 | -8.615850e-47 |
| Msa0516810 | Msa0698780 | 0.802239 | 6.165805e-49 | -8.615850e-47 |
| Msa0521050 | Msa0698780 | 0.893037 | 9.122367e-75 | -8.615850e-47 |
| Msa0524110 | Msa0698780 | 0.831874 | 1.303438e-55 | -8.615850e-47 |
| Msa0524500 | Msa0698780 | 0.816357 | 5.764725e-52 | -8.615850e-47 |
| Msa0526540 | Msa0698780 | 0.842880 | 1.973112e-58 | -8.615850e-47 |
| Msa0527020 | Msa0698780 | 0.813600 | 2.357541e-51 | -8.615850e-47 |
| Msa0527150 | Msa0698780 | 0.847009 | 1.516219e-59 | -8.615850e-47 |
| Msa0531530 | Msa0698780 | 0.804631 | 1.969407e-49 | -8.615850e-47 |
| Msa0531650 | Msa0698780 | 0.859555 | 3.813246e-63 | -8.615850e-47 |
| Msa0534750 | Msa0698780 | 0.836614 | 8.438046e-57 | -8.615850e-47 |
| Msa0539410 | Msa0698780 | 0.807872 | 4.088644e-50 | -8.615850e-47 |
| Msa0548240 | Msa0698780 | 0.819901 | 9.102510e-53 | -8.615850e-47 |
| Msa0556060 | Msa0698780 | 0.828025 | 1.130665e-54 | -8.615850e-47 |
| Msa0571920 | Msa0698780 | 0.807385 | 5.187253e-50 | -8.615850e-47 |
| Msa0576940 | Msa0698780 | 0.828846 | 7.163533e-55 | -8.615850e-47 |
| Msa0581110 | Msa0698780 | 0.894294 | 2.823901e-75 | -8.615850e-47 |
| Msa0581280 | Msa0698780 | 0.825121 | 5.571619e-54 | -8.615850e-47 |
| Msa0584260 | Msa0698780 | 0.818068 | 2.377349e-52 | -8.615850e-47 |
| Msa0586420 | Msa0698780 | 0.805063 | 1.599832e-49 | -8.615850e-47 |
| Msa0588260 | Msa0698780 | 0.838458 | 2.841273e-57 | -8.615850e-47 |
| Msa0588360 | Msa0698780 | 0.891769 | 2.936187e-74 | -8.615850e-47 |
| Msa0588630 | Msa0698780 | -0.824957 | 6.090820e-54 | -8.615850e-47 |
| Msa0590940 | Msa0698780 | 0.820401 | 6.992779e-53 | -8.615850e-47 |
| Msa0595170 | Msa0698780 | 0.805782 | 1.130611e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698780 | MtrunA17_Chr4g0052211 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 5.90e-108 | 303 |
| Msa0698780 | MtrunA17_Chr2g0286111 | 98.675 | 151 | 2 | 0 | 1 | 151 | 1 | 151 | 8.04e-107 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698780 | AT3G11510.1 | 90.580 | 138 | 13 | 0 | 3 | 140 | 2 | 139 | 9.44e-91 | 260 |
| Msa0698780 | AT3G52580.1 | 89.855 | 138 | 14 | 0 | 3 | 140 | 2 | 139 | 3.52e-90 | 259 |
| Msa0698780 | AT2G36160.1 | 89.130 | 138 | 15 | 0 | 3 | 140 | 2 | 139 | 1.91e-89 | 257 |
| Msa0698780 | ATCG00750.1 | 33.613 | 119 | 70 | 2 | 29 | 147 | 28 | 137 | 7.74e-12 | 59.7 |
Find 78 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTAATTTGTAATGGTTTC+TGG | 0.147196 | 4_4:+69171108 | Msa0698780:three_prime_UTR |
| AAGAAATTTATCTATGGATT+AGG | 0.216710 | 4_4:-69168474 | None:intergenic |
| CCCTTATGAGTATAACTTAA+TGG | 0.218904 | 4_4:+69171000 | Msa0698780:three_prime_UTR |
| CTGAGTTTGCTATGGTATTA+TGG | 0.243579 | 4_4:+69170717 | Msa0698780:exon |
| TATATCTTGGGCTGGGCTTT+TGG | 0.261459 | 4_4:-69168439 | None:intergenic |
| AGAGTCACTGTTTCTTCCTT+TGG | 0.286906 | 4_4:-69168797 | None:intergenic |
| ATAAACTCATGTAGAACTTT+TGG | 0.286970 | 4_4:-69170865 | None:intergenic |
| CACGATGAAGGTATCGTTAA+AGG | 0.289627 | 4_4:-69168876 | None:intergenic |
| AGAAATTTATCTATGGATTA+GGG | 0.303040 | 4_4:-69168473 | None:intergenic |
| GGGTGCTGTCAGAAGGAATT+GGG | 0.306077 | 4_4:-69170663 | None:intergenic |
| TTTCTTTCCAGACTGTATTA+TGG | 0.314408 | 4_4:+69170781 | Msa0698780:three_prime_UTR |
| GAAACACTTGTCCGTATTAC+TGG | 0.323177 | 4_4:+69169014 | Msa0698780:CDS |
| TACCCCTTCTACCACTCTTT+CGG | 0.329294 | 4_4:-69170687 | None:intergenic |
| CGGGTGCTGTCAGAAGGAAT+TGG | 0.336102 | 4_4:-69170664 | None:intergenic |
| GCCATTAAGTTATACTCATA+AGG | 0.376078 | 4_4:-69171001 | None:intergenic |
| CGGAGAGCAGCCTGAGCACC+AGG | 0.397348 | 4_4:-69170341 | None:intergenic |
| AACACCAGGCCCTGGTGCTC+AGG | 0.414511 | 4_4:+69170331 | Msa0698780:CDS |
| CTCCGAGCCTTGGCTCGGTC+AGG | 0.414628 | 4_4:+69170359 | Msa0698780:CDS |
| GAGAAGAAGAAATTTATCTA+TGG | 0.418279 | 4_4:-69168480 | None:intergenic |
| CCCGCCGAAAGAGTGGTAGA+AGG | 0.418808 | 4_4:+69170683 | Msa0698780:CDS |
| TGTGAAAGTATATCTTGGGC+TGG | 0.427287 | 4_4:-69168447 | None:intergenic |
| CAGCATGTAACTGATTTGTC+TGG | 0.432105 | 4_4:+69168987 | Msa0698780:intron |
| TCAGGCTGCTCTCCGAGCCT+TGG | 0.439119 | 4_4:+69170349 | Msa0698780:CDS |
| CGTACCATTGTTGAAGGTGT+TGG | 0.439846 | 4_4:-69168574 | None:intergenic |
| GCAGCCTGAGCACCAGGGCC+TGG | 0.441174 | 4_4:-69170335 | None:intergenic |
| AAATGCAATTACCTTGCATC+TGG | 0.446928 | 4_4:-69170127 | None:intergenic |
| CTATCTTTCAGGTGGAATGA+AGG | 0.447568 | 4_4:+69170041 | Msa0698780:intron |
| TCTTCTTCAGAGAGAACAAA+TGG | 0.451278 | 4_4:-69168518 | None:intergenic |
| AGAGTGGTAGAAGGGGTAGA+AGG | 0.460011 | 4_4:+69170692 | Msa0698780:CDS |
| GTGAAAGTATATCTTGGGCT+GGG | 0.467093 | 4_4:-69168446 | None:intergenic |
| ACGTTGGCTGTAATTTGTAA+TGG | 0.469131 | 4_4:+69171101 | Msa0698780:three_prime_UTR |
| CCCTTCTACCACTCTTTCGG+CGG | 0.475876 | 4_4:-69170684 | None:intergenic |
| CCATTAAGTTATACTCATAA+GGG | 0.478409 | 4_4:-69171000 | None:intergenic |
| TGTTCACCATCTTTAACAGC+TGG | 0.478914 | 4_4:-69168824 | None:intergenic |
| CTGCTCTCCGAGCCTTGGCT+CGG | 0.481498 | 4_4:+69170354 | Msa0698780:CDS |
| CACATCAAACTCCGTGCCAC+TGG | 0.484727 | 4_4:+69170293 | Msa0698780:CDS |
| TGTGTTCTGGAACAGGAGTT+GGG | 0.489912 | 4_4:+69170257 | Msa0698780:intron |
| CAAATTACAACCAACGTAAG+TGG | 0.493896 | 4_4:-69171066 | None:intergenic |
| GCACGCCGGCGGATTGAAGC+AGG | 0.498204 | 4_4:+69168548 | Msa0698780:five_prime_UTR |
| AGTGGGAATTTCACAGCCAT+TGG | 0.498585 | 4_4:-69171048 | None:intergenic |
| GTTCTCTCTGAAGAAGAAGA+AGG | 0.499248 | 4_4:+69168524 | Msa0698780:five_prime_UTR |
| GAATATGCCATAATACAGTC+TGG | 0.507182 | 4_4:-69170788 | None:intergenic |
| TTTAGTCTTGTTTCCTCCAG+TGG | 0.507848 | 4_4:-69170309 | None:intergenic |
| GGATTCCTGCTTCAATCCGC+CGG | 0.508270 | 4_4:-69168553 | None:intergenic |
| AAACACACTTACCAGTAATA+CGG | 0.508460 | 4_4:-69169025 | None:intergenic |
| CCTTCTACCACTCTTTCGGC+GGG | 0.512822 | 4_4:-69170683 | None:intergenic |
| GCAGCAAGCATAGCAGCATA+TGG | 0.514159 | 4_4:-69170090 | None:intergenic |
| GCTCGGTCAGGAATGAAAAT+CGG | 0.525104 | 4_4:+69170371 | Msa0698780:CDS |
| TGCAATTACCTTGCATCTGG+TGG | 0.525795 | 4_4:-69170124 | None:intergenic |
| AGTTAACGTACCATTGTTGA+AGG | 0.530074 | 4_4:-69168580 | None:intergenic |
| CCGCCGAAAGAGTGGTAGAA+GGG | 0.532687 | 4_4:+69170684 | Msa0698780:CDS |
| AAGGAAGAAACAGTGACTCT+TGG | 0.536189 | 4_4:+69168800 | Msa0698780:CDS |
| TTTCGGCGGGTGCTGTCAGA+AGG | 0.542032 | 4_4:-69170670 | None:intergenic |
| GGTAAATAGACTCACGATGA+AGG | 0.542298 | 4_4:-69168888 | None:intergenic |
| ATTGTAGTCGTCGAAGAGAA+AGG | 0.542368 | 4_4:+69168766 | Msa0698780:intron |
| TCTTGTTTCCTCCAGTGGCA+CGG | 0.542571 | 4_4:-69170304 | None:intergenic |
| TTCCTGACCGAGCCAAGGCT+CGG | 0.542845 | 4_4:-69170361 | None:intergenic |
| CTTGGTCCAGCTGTTAAAGA+TGG | 0.556489 | 4_4:+69168818 | Msa0698780:CDS |
| AAGACTAAAACACCAGGCCC+TGG | 0.563534 | 4_4:+69170323 | Msa0698780:CDS |
| GAGAAAGGTTAGAGAGCCAA+AGG | 0.564924 | 4_4:+69168781 | Msa0698780:CDS |
| GTTTGCTATGGTATTATGGA+AGG | 0.571748 | 4_4:+69170721 | Msa0698780:three_prime_UTR |
| AGAAGGCTCTGAGTTTGCTA+TGG | 0.575425 | 4_4:+69170709 | Msa0698780:exon |
| GAATCCAACACCTTCAACAA+TGG | 0.577889 | 4_4:+69168570 | Msa0698780:exon |
| GACAGCACCCGCCGAAAGAG+TGG | 0.584213 | 4_4:+69170676 | Msa0698780:CDS |
| TTTCATTCCTGACCGAGCCA+AGG | 0.585926 | 4_4:-69170366 | None:intergenic |
| ACTTACTATTAAAATACCAA+TGG | 0.590835 | 4_4:+69171032 | Msa0698780:three_prime_UTR |
| AAATTACAACCAACGTAAGT+GGG | 0.595719 | 4_4:-69171065 | None:intergenic |
| GGAATGAAAATCGGTCGCAT+AGG | 0.601542 | 4_4:+69170380 | Msa0698780:CDS |
| ATCAAACTCCGTGCCACTGG+AGG | 0.606930 | 4_4:+69170296 | Msa0698780:CDS |
| AAGAAGAAGGTGCACGCCGG+CGG | 0.611862 | 4_4:+69168537 | Msa0698780:five_prime_UTR |
| AGATGTCGCCACCAGATGCA+AGG | 0.617051 | 4_4:+69170116 | Msa0698780:CDS |
| AGCATGTAACTGATTTGTCT+GGG | 0.620131 | 4_4:+69168988 | Msa0698780:intron |
| GGTGCTGTCAGAAGGAATTG+GGG | 0.625333 | 4_4:-69170662 | None:intergenic |
| CGCCGAAAGAGTGGTAGAAG+GGG | 0.627165 | 4_4:+69170685 | Msa0698780:CDS |
| GGAGAGCAGCCTGAGCACCA+GGG | 0.647832 | 4_4:-69170340 | None:intergenic |
| AAGAAGAAGAAGGTGCACGC+CGG | 0.658500 | 4_4:+69168534 | Msa0698780:five_prime_UTR |
| GGAAACAAGACTAAAACACC+AGG | 0.683642 | 4_4:+69170317 | Msa0698780:CDS |
| TGTGAAATTCCCACTTACGT+TGG | 0.693028 | 4_4:+69171056 | Msa0698780:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAATTTCAATTTCAA+AGG | - | chr4_4:69168696-69168715 | None:intergenic | 15.0% |
| !! | AAAAATAAGTCAATCAAAAT+GGG | - | chr4_4:69169338-69169357 | None:intergenic | 15.0% |
| !! | AAAAAATAAGTCAATCAAAA+TGG | - | chr4_4:69169339-69169358 | None:intergenic | 15.0% |
| !!! | AGAAATTTATCTATGGATTA+GGG | - | chr4_4:69168476-69168495 | None:intergenic | 20.0% |
| !! | AAGAAATTTATCTATGGATT+AGG | - | chr4_4:69168477-69168496 | None:intergenic | 20.0% |
| !! | TTATTACAGATCAATGTTTA+TGG | - | chr4_4:69168606-69168625 | None:intergenic | 20.0% |
| !! | AAAAAACACACAAAACAATT+TGG | - | chr4_4:69168932-69168951 | None:intergenic | 20.0% |
| !! | ACTTATCATGATTAGATATA+TGG | + | chr4_4:69169312-69169331 | Msa0698780:intron | 20.0% |
| !! | AACACCAAATAAAAAACATT+TGG | + | chr4_4:69169788-69169807 | Msa0698780:intron | 20.0% |
| !! | ACACCAAATAAAAAACATTT+GGG | + | chr4_4:69169789-69169808 | Msa0698780:intron | 20.0% |
| !! | ACCCATAATGAAAAATATTT+GGG | - | chr4_4:69169931-69169950 | None:intergenic | 20.0% |
| !! | AACCCATAATGAAAAATATT+TGG | - | chr4_4:69169932-69169951 | None:intergenic | 20.0% |
| !! | ATTCAATCAAATTAAAAGCA+GGG | - | chr4_4:69170194-69170213 | None:intergenic | 20.0% |
| !! | AATTCAATCAAATTAAAAGC+AGG | - | chr4_4:69170195-69170214 | None:intergenic | 20.0% |
| !!! | TATTCTTTTAGTCCATTTTT+AGG | + | chr4_4:69170403-69170422 | Msa0698780:intron | 20.0% |
| !! | AATACAAAATAAGAGTAACT+GGG | - | chr4_4:69170550-69170569 | None:intergenic | 20.0% |
| !! | CTGCAAATTTAAAAAACAAA+AGG | - | chr4_4:69170633-69170652 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTTAAATTTGCAG+AGG | + | chr4_4:69170633-69170652 | Msa0698780:intron | 20.0% |
| !!! | TATTTGATTTACATCTTTTG+CGG | + | chr4_4:69170933-69170952 | Msa0698780:three_prime_UTR | 20.0% |
| !! | ACTTACTATTAAAATACCAA+TGG | + | chr4_4:69171032-69171051 | Msa0698780:three_prime_UTR | 20.0% |
| !!! | GTTTTGTGAAAGTATATCTT+GGG | - | chr4_4:69168454-69168473 | None:intergenic | 25.0% |
| ! | GAGAAGAAGAAATTTATCTA+TGG | - | chr4_4:69168483-69168502 | None:intergenic | 25.0% |
| ! | ATTTCACTACAAACACTTTA+TGG | + | chr4_4:69168625-69168644 | Msa0698780:intron | 25.0% |
| !! | TATGTTTGATATGTGTTTTG+TGG | + | chr4_4:69169181-69169200 | Msa0698780:intron | 25.0% |
| ! | AAAAATAAGCTAATCCTAAC+AGG | + | chr4_4:69169461-69169480 | Msa0698780:intron | 25.0% |
| ! | TAGCTTATATGAAAACACTT+GGG | - | chr4_4:69169523-69169542 | None:intergenic | 25.0% |
| ! | ATAGCTTATATGAAAACACT+TGG | - | chr4_4:69169524-69169543 | None:intergenic | 25.0% |
| ! | AAAATTGTAAATGGCAAGAA+GGG | - | chr4_4:69169724-69169743 | None:intergenic | 25.0% |
| ! | TTGCTCCATTTATATTATCA+GGG | - | chr4_4:69169753-69169772 | None:intergenic | 25.0% |
| ! | ATTGCTCCATTTATATTATC+AGG | - | chr4_4:69169754-69169773 | None:intergenic | 25.0% |
| !! | TGCCCAAATATTTTTCATTA+TGG | + | chr4_4:69169926-69169945 | Msa0698780:intron | 25.0% |
| !! | GCCCAAATATTTTTCATTAT+GGG | + | chr4_4:69169927-69169946 | Msa0698780:intron | 25.0% |
| ! | TGTCTAATTTACTATCTTTC+AGG | + | chr4_4:69170030-69170049 | Msa0698780:intron | 25.0% |
| ! | TTCAATCAAATTAAAAGCAG+GGG | - | chr4_4:69170193-69170212 | None:intergenic | 25.0% |
| ! | GAATACAAAATAAGAGTAAC+TGG | - | chr4_4:69170551-69170570 | None:intergenic | 25.0% |
| !! | ATAAACTCATGTAGAACTTT+TGG | - | chr4_4:69170868-69170887 | None:intergenic | 25.0% |
| ! | CCATTAAGTTATACTCATAA+GGG | - | chr4_4:69171003-69171022 | None:intergenic | 25.0% |
| !! | GGTTTTGTGAAAGTATATCT+TGG | - | chr4_4:69168455-69168474 | None:intergenic | 30.0% |
| !!! | TGTTTTTCTCTAAGATCTGA+TGG | + | chr4_4:69168720-69168739 | Msa0698780:intron | 30.0% |
| ! | AAAGATGGTGAACAAGTTTT+TGG | + | chr4_4:69168833-69168852 | Msa0698780:CDS | 30.0% |
| TGGAATGAATGATAAAACGA+AGG | - | chr4_4:69168912-69168931 | None:intergenic | 30.0% | |
| AAACACACTTACCAGTAATA+CGG | - | chr4_4:69169028-69169047 | None:intergenic | 30.0% | |
| AATGCCAAAAGTGAAGATTT+GGG | + | chr4_4:69169255-69169274 | Msa0698780:intron | 30.0% | |
| AAGTTGGAAATAACCAAACA+GGG | - | chr4_4:69169281-69169300 | None:intergenic | 30.0% | |
| ! | TAAGTTGGAAATAACCAAAC+AGG | - | chr4_4:69169282-69169301 | None:intergenic | 30.0% |
| ACATTATGCAAAACAGCTTA+CGG | - | chr4_4:69169439-69169458 | None:intergenic | 30.0% | |
| AAATAGCTTATGAACCTGTT+AGG | - | chr4_4:69169478-69169497 | None:intergenic | 30.0% | |
| !!! | ACACTTGTTTTAGAGAACTT+AGG | - | chr4_4:69169660-69169679 | None:intergenic | 30.0% |
| CAAAATTGTAAATGGCAAGA+AGG | - | chr4_4:69169725-69169744 | None:intergenic | 30.0% | |
| CTCTACCCTGATAATATAAA+TGG | + | chr4_4:69169745-69169764 | Msa0698780:intron | 30.0% | |
| AAATGGAGCAATTCTTCTAT+TGG | + | chr4_4:69169762-69169781 | Msa0698780:intron | 30.0% | |
| !!! | GTGCCCAAATGTTTTTTATT+TGG | - | chr4_4:69169795-69169814 | None:intergenic | 30.0% |
| ATAAATGAGCGATTCTACTA+TGG | - | chr4_4:69169959-69169978 | None:intergenic | 30.0% | |
| CTAATTTACTATCTTTCAGG+TGG | + | chr4_4:69170033-69170052 | Msa0698780:intron | 30.0% | |
| AAGCTAATTAGATACTAAGC+TGG | - | chr4_4:69170609-69170628 | None:intergenic | 30.0% | |
| !!! | AGCTGCTTCTGTTTTTATTT+TGG | + | chr4_4:69170744-69170763 | Msa0698780:three_prime_UTR | 30.0% |
| TCTGGAAAGAAACAAAAACA+CGG | - | chr4_4:69170773-69170792 | None:intergenic | 30.0% | |
| TTTCTTTCCAGACTGTATTA+TGG | + | chr4_4:69170781-69170800 | Msa0698780:three_prime_UTR | 30.0% | |
| ! | TGCTTCATCTAACTTTTGTT+CGG | + | chr4_4:69170967-69170986 | Msa0698780:three_prime_UTR | 30.0% |
| CCCTTATGAGTATAACTTAA+TGG | + | chr4_4:69171000-69171019 | Msa0698780:three_prime_UTR | 30.0% | |
| GCCATTAAGTTATACTCATA+AGG | - | chr4_4:69171004-69171023 | None:intergenic | 30.0% | |
| AAATTACAACCAACGTAAGT+GGG | - | chr4_4:69171068-69171087 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTTGAAGACACGT+TGG | + | chr4_4:69171085-69171104 | Msa0698780:three_prime_UTR | 30.0% |
| ! | CTGTAATTTGTAATGGTTTC+TGG | + | chr4_4:69171108-69171127 | Msa0698780:three_prime_UTR | 30.0% |
| TCTTCTTCAGAGAGAACAAA+TGG | - | chr4_4:69168521-69168540 | None:intergenic | 35.0% | |
| AGTTAACGTACCATTGTTGA+AGG | - | chr4_4:69168583-69168602 | None:intergenic | 35.0% | |
| ! | AGATCTGATGGTTTGTGAAA+TGG | + | chr4_4:69168732-69168751 | Msa0698780:intron | 35.0% |
| !! | AGCATGTAACTGATTTGTCT+GGG | + | chr4_4:69168988-69169007 | Msa0698780:intron | 35.0% |
| !! | TTTGTGGAACTCTGTTTCTA+TGG | + | chr4_4:69169197-69169216 | Msa0698780:intron | 35.0% |
| CAATGCCAAAAGTGAAGATT+TGG | + | chr4_4:69169254-69169273 | Msa0698780:intron | 35.0% | |
| TAAGTGCACACACTATAAGT+TGG | - | chr4_4:69169297-69169316 | None:intergenic | 35.0% | |
| !! | ATTTTCCAAAATAGCTTGCG+AGG | - | chr4_4:69169554-69169573 | None:intergenic | 35.0% |
| GGGTAGAGCAAAATTGTAAA+TGG | - | chr4_4:69169733-69169752 | None:intergenic | 35.0% | |
| AAATGCAATTACCTTGCATC+TGG | - | chr4_4:69170130-69170149 | None:intergenic | 35.0% | |
| CAAAATAAGAGTAACTGGGA+AGG | - | chr4_4:69170546-69170565 | None:intergenic | 35.0% | |
| !! | CTGAGTTTGCTATGGTATTA+TGG | + | chr4_4:69170717-69170736 | Msa0698780:exon | 35.0% |
| !! | GTTTGCTATGGTATTATGGA+AGG | + | chr4_4:69170721-69170740 | Msa0698780:three_prime_UTR | 35.0% |
| GAATATGCCATAATACAGTC+TGG | - | chr4_4:69170791-69170810 | None:intergenic | 35.0% | |
| CAAATTACAACCAACGTAAG+TGG | - | chr4_4:69171069-69171088 | None:intergenic | 35.0% | |
| ! | ACGTTGGCTGTAATTTGTAA+TGG | + | chr4_4:69171101-69171120 | Msa0698780:three_prime_UTR | 35.0% |
| ! | GTGAAAGTATATCTTGGGCT+GGG | - | chr4_4:69168449-69168468 | None:intergenic | 40.0% |
| ! | TGTGAAAGTATATCTTGGGC+TGG | - | chr4_4:69168450-69168469 | None:intergenic | 40.0% |
| ! | GTTCTCTCTGAAGAAGAAGA+AGG | + | chr4_4:69168524-69168543 | Msa0698780:five_prime_UTR | 40.0% |
| GAATCCAACACCTTCAACAA+TGG | + | chr4_4:69168570-69168589 | Msa0698780:exon | 40.0% | |
| ! | CTGATGGTTTGTGAAATGGT+TGG | + | chr4_4:69168736-69168755 | Msa0698780:intron | 40.0% |
| ATTGTAGTCGTCGAAGAGAA+AGG | + | chr4_4:69168766-69168785 | Msa0698780:intron | 40.0% | |
| ! | AGAGTCACTGTTTCTTCCTT+TGG | - | chr4_4:69168800-69168819 | None:intergenic | 40.0% |
| AAGGAAGAAACAGTGACTCT+TGG | + | chr4_4:69168800-69168819 | Msa0698780:CDS | 40.0% | |
| TGTTCACCATCTTTAACAGC+TGG | - | chr4_4:69168827-69168846 | None:intergenic | 40.0% | |
| !! | CACGATGAAGGTATCGTTAA+AGG | - | chr4_4:69168879-69168898 | None:intergenic | 40.0% |
| GGTAAATAGACTCACGATGA+AGG | - | chr4_4:69168891-69168910 | None:intergenic | 40.0% | |
| !! | CAGCATGTAACTGATTTGTC+TGG | + | chr4_4:69168987-69169006 | Msa0698780:intron | 40.0% |
| GAAACACTTGTCCGTATTAC+TGG | + | chr4_4:69169014-69169033 | Msa0698780:CDS | 40.0% | |
| ! | CTATCTTTCAGGTGGAATGA+AGG | + | chr4_4:69170041-69170060 | Msa0698780:intron | 40.0% |
| !! | AATTTGCTGATCCTGTGTTC+TGG | + | chr4_4:69170244-69170263 | Msa0698780:intron | 40.0% |
| !! | TTTAGTCTTGTTTCCTCCAG+TGG | - | chr4_4:69170312-69170331 | None:intergenic | 40.0% |
| GGAAACAAGACTAAAACACC+AGG | + | chr4_4:69170317-69170336 | Msa0698780:CDS | 40.0% | |
| CACGACATGCATCCTAAAAA+TGG | - | chr4_4:69170418-69170437 | None:intergenic | 40.0% | |
| !!! | CATTTTTAGGATGCATGTCG+TGG | + | chr4_4:69170416-69170435 | Msa0698780:intron | 40.0% |
| TGTGAAATTCCCACTTACGT+TGG | + | chr4_4:69171056-69171075 | Msa0698780:three_prime_UTR | 40.0% | |
| !! | TATATCTTGGGCTGGGCTTT+TGG | - | chr4_4:69168442-69168461 | None:intergenic | 45.0% |
| ! | CGTACCATTGTTGAAGGTGT+TGG | - | chr4_4:69168577-69168596 | None:intergenic | 45.0% |
| GAGAAAGGTTAGAGAGCCAA+AGG | + | chr4_4:69168781-69168800 | Msa0698780:CDS | 45.0% | |
| CTTGGTCCAGCTGTTAAAGA+TGG | + | chr4_4:69168818-69168837 | Msa0698780:CDS | 45.0% | |
| ! | AGGGCCCAAATCTTCACTTT+TGG | - | chr4_4:69169262-69169281 | None:intergenic | 45.0% |
| AATGGCAAGAAGGGTCTGTT+TGG | - | chr4_4:69169715-69169734 | None:intergenic | 45.0% | |
| ACATGCATCCAGCTGGTTAA+TGG | - | chr4_4:69169994-69170013 | None:intergenic | 45.0% | |
| TGCAATTACCTTGCATCTGG+TGG | - | chr4_4:69170127-69170146 | None:intergenic | 45.0% | |
| !! | TGTGTTCTGGAACAGGAGTT+GGG | + | chr4_4:69170257-69170276 | Msa0698780:intron | 45.0% |
| GCTCGGTCAGGAATGAAAAT+CGG | + | chr4_4:69170371-69170390 | Msa0698780:CDS | 45.0% | |
| GGAATGAAAATCGGTCGCAT+AGG | + | chr4_4:69170380-69170399 | Msa0698780:CDS | 45.0% | |
| TACCCCTTCTACCACTCTTT+CGG | - | chr4_4:69170690-69170709 | None:intergenic | 45.0% | |
| !! | AGAAGGCTCTGAGTTTGCTA+TGG | + | chr4_4:69170709-69170728 | Msa0698780:exon | 45.0% |
| AGTGGGAATTTCACAGCCAT+TGG | - | chr4_4:69171051-69171070 | None:intergenic | 45.0% | |
| ! | AAGAAGAAGAAGGTGCACGC+CGG | + | chr4_4:69168534-69168553 | Msa0698780:five_prime_UTR | 50.0% |
| GTGAAGATTTGGGCCCTGTT+TGG | + | chr4_4:69169265-69169284 | Msa0698780:intron | 50.0% | |
| ! | CCAAAATAGCTTGCGAGGAC+AGG | - | chr4_4:69169549-69169568 | None:intergenic | 50.0% |
| ! | CCTGTCCTCGCAAGCTATTT+TGG | + | chr4_4:69169546-69169565 | Msa0698780:intron | 50.0% |
| CTTCGTTGCCATTAACCAGC+TGG | + | chr4_4:69169983-69170002 | Msa0698780:intron | 50.0% | |
| GACTTAGACATGCATCCAGC+TGG | - | chr4_4:69170001-69170020 | None:intergenic | 50.0% | |
| GCAGCAAGCATAGCAGCATA+TGG | - | chr4_4:69170093-69170112 | None:intergenic | 50.0% | |
| !! | CTGATCCTGTGTTCTGGAAC+AGG | + | chr4_4:69170250-69170269 | Msa0698780:intron | 50.0% |
| CAACTCCTGTTCCAGAACAC+AGG | - | chr4_4:69170258-69170277 | None:intergenic | 50.0% | |
| !! | CTGTGTTCTGGAACAGGAGT+TGG | + | chr4_4:69170256-69170275 | Msa0698780:intron | 50.0% |
| ! | TCTTGTTTCCTCCAGTGGCA+CGG | - | chr4_4:69170307-69170326 | None:intergenic | 50.0% |
| AAGACTAAAACACCAGGCCC+TGG | + | chr4_4:69170323-69170342 | Msa0698780:CDS | 50.0% | |
| TTTCATTCCTGACCGAGCCA+AGG | - | chr4_4:69170369-69170388 | None:intergenic | 50.0% | |
| ATCACCAGCTTAGAGCAGCA+GGG | - | chr4_4:69170452-69170471 | None:intergenic | 50.0% | |
| ! | TCTAAGCTGGTGATGTGGTC+TGG | + | chr4_4:69170458-69170477 | Msa0698780:intron | 50.0% |
| ! | GGTGCTGTCAGAAGGAATTG+GGG | - | chr4_4:69170665-69170684 | None:intergenic | 50.0% |
| ! | GGGTGCTGTCAGAAGGAATT+GGG | - | chr4_4:69170666-69170685 | None:intergenic | 50.0% |
| AGAGTGGTAGAAGGGGTAGA+AGG | + | chr4_4:69170692-69170711 | Msa0698780:CDS | 50.0% | |
| GGATTCCTGCTTCAATCCGC+CGG | - | chr4_4:69168556-69168575 | None:intergenic | 55.0% | |
| AGATGTCGCCACCAGATGCA+AGG | + | chr4_4:69170116-69170135 | Msa0698780:CDS | 55.0% | |
| CACATCAAACTCCGTGCCAC+TGG | + | chr4_4:69170293-69170312 | Msa0698780:CDS | 55.0% | |
| ! | ATCAAACTCCGTGCCACTGG+AGG | + | chr4_4:69170296-69170315 | Msa0698780:CDS | 55.0% |
| ! | TGTTCCCTGCTGCTCTAAGC+TGG | + | chr4_4:69170445-69170464 | Msa0698780:intron | 55.0% |
| CATCACCAGCTTAGAGCAGC+AGG | - | chr4_4:69170453-69170472 | None:intergenic | 55.0% | |
| ! | GCTGCTCTAAGCTGGTGATG+TGG | + | chr4_4:69170453-69170472 | Msa0698780:intron | 55.0% |
| ! | CGGGTGCTGTCAGAAGGAAT+TGG | - | chr4_4:69170667-69170686 | None:intergenic | 55.0% |
| CCTTCTACCACTCTTTCGGC+GGG | - | chr4_4:69170686-69170705 | None:intergenic | 55.0% | |
| CCCTTCTACCACTCTTTCGG+CGG | - | chr4_4:69170687-69170706 | None:intergenic | 55.0% | |
| CCGCCGAAAGAGTGGTAGAA+GGG | + | chr4_4:69170684-69170703 | Msa0698780:CDS | 55.0% | |
| CGCCGAAAGAGTGGTAGAAG+GGG | + | chr4_4:69170685-69170704 | Msa0698780:CDS | 55.0% | |
| ! | AAGAAGAAGGTGCACGCCGG+CGG | + | chr4_4:69168537-69168556 | Msa0698780:five_prime_UTR | 60.0% |
| TTCCTGACCGAGCCAAGGCT+CGG | - | chr4_4:69170364-69170383 | None:intergenic | 60.0% | |
| ! | TTTCGGCGGGTGCTGTCAGA+AGG | - | chr4_4:69170673-69170692 | None:intergenic | 60.0% |
| CCCGCCGAAAGAGTGGTAGA+AGG | + | chr4_4:69170683-69170702 | Msa0698780:CDS | 60.0% | |
| AACACCAGGCCCTGGTGCTC+AGG | + | chr4_4:69170331-69170350 | Msa0698780:CDS | 65.0% | |
| GGAGAGCAGCCTGAGCACCA+GGG | - | chr4_4:69170343-69170362 | None:intergenic | 65.0% | |
| TCAGGCTGCTCTCCGAGCCT+TGG | + | chr4_4:69170349-69170368 | Msa0698780:CDS | 65.0% | |
| CTGCTCTCCGAGCCTTGGCT+CGG | + | chr4_4:69170354-69170373 | Msa0698780:CDS | 65.0% | |
| GACAGCACCCGCCGAAAGAG+TGG | + | chr4_4:69170676-69170695 | Msa0698780:CDS | 65.0% | |
| !! | GCACGCCGGCGGATTGAAGC+AGG | + | chr4_4:69168548-69168567 | Msa0698780:five_prime_UTR | 70.0% |
| CGGAGAGCAGCCTGAGCACC+AGG | - | chr4_4:69170344-69170363 | None:intergenic | 70.0% | |
| !! | CTCCGAGCCTTGGCTCGGTC+AGG | + | chr4_4:69170359-69170378 | Msa0698780:CDS | 70.0% |
| GCAGCCTGAGCACCAGGGCC+TGG | - | chr4_4:69170338-69170357 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69168412 | 69171140 | 69168412 | ID=Msa0698780;Name=Msa0698780 |
| chr4_4 | mRNA | 69168412 | 69171140 | 69168412 | ID=Msa0698780-mRNA-1;Parent=Msa0698780;Name=Msa0698780-mRNA-1;_AED=0.03;_eAED=0.03;_QI=177|1|1|1|1|1|6|420|151 |
| chr4_4 | exon | 69168412 | 69168591 | 69168412 | ID=Msa0698780-mRNA-1:exon:20657;Parent=Msa0698780-mRNA-1 |
| chr4_4 | exon | 69168773 | 69168895 | 69168773 | ID=Msa0698780-mRNA-1:exon:20658;Parent=Msa0698780-mRNA-1 |
| chr4_4 | exon | 69168990 | 69169035 | 69168990 | ID=Msa0698780-mRNA-1:exon:20659;Parent=Msa0698780-mRNA-1 |
| chr4_4 | exon | 69170052 | 69170137 | 69170052 | ID=Msa0698780-mRNA-1:exon:20660;Parent=Msa0698780-mRNA-1 |
| chr4_4 | exon | 69170272 | 69170401 | 69170272 | ID=Msa0698780-mRNA-1:exon:20661;Parent=Msa0698780-mRNA-1 |
| chr4_4 | exon | 69170653 | 69171140 | 69170653 | ID=Msa0698780-mRNA-1:exon:20662;Parent=Msa0698780-mRNA-1 |
| chr4_4 | five_prime_UTR | 69168412 | 69168588 | 69168412 | ID=Msa0698780-mRNA-1:five_prime_utr;Parent=Msa0698780-mRNA-1 |
| chr4_4 | CDS | 69168589 | 69168591 | 69168589 | ID=Msa0698780-mRNA-1:cds;Parent=Msa0698780-mRNA-1 |
| chr4_4 | CDS | 69168773 | 69168895 | 69168773 | ID=Msa0698780-mRNA-1:cds;Parent=Msa0698780-mRNA-1 |
| chr4_4 | CDS | 69168990 | 69169035 | 69168990 | ID=Msa0698780-mRNA-1:cds;Parent=Msa0698780-mRNA-1 |
| chr4_4 | CDS | 69170052 | 69170137 | 69170052 | ID=Msa0698780-mRNA-1:cds;Parent=Msa0698780-mRNA-1 |
| chr4_4 | CDS | 69170272 | 69170401 | 69170272 | ID=Msa0698780-mRNA-1:cds;Parent=Msa0698780-mRNA-1 |
| chr4_4 | CDS | 69170653 | 69170720 | 69170653 | ID=Msa0698780-mRNA-1:cds;Parent=Msa0698780-mRNA-1 |
| chr4_4 | three_prime_UTR | 69170721 | 69171140 | 69170721 | ID=Msa0698780-mRNA-1:three_prime_utr;Parent=Msa0698780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
