Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525930 | XP_013467010.1 | 100.000 | 150 | 0 | 0 | 1 | 150 | 1 | 150 | 5.19e-101 | 296 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525930 | sp|Q9LIK5|CML11_ARATH | 84.247 | 146 | 23 | 0 | 5 | 150 | 28 | 173 | 7.33e-87 | 254 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525930 | I3SJF9 | 100.000 | 150 | 0 | 0 | 1 | 150 | 1 | 150 | 2.48e-101 | 296 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0064450 | Msa0525930 | 0.806703 | 7.231210e-50 | -8.615850e-47 |
Msa0155510 | Msa0525930 | 0.983384 | 1.354740e-157 | -8.615850e-47 |
Msa0155730 | Msa0525930 | 0.953990 | 8.072841e-112 | -8.615850e-47 |
Msa0236940 | Msa0525930 | 0.806585 | 7.657729e-50 | -8.615850e-47 |
Msa0390170 | Msa0525930 | 0.822532 | 2.252668e-53 | -8.615850e-47 |
Msa0242720 | Msa0525930 | 0.817870 | 2.634418e-52 | -8.615850e-47 |
Msa0318490 | Msa0525930 | 0.804601 | 1.997741e-49 | -8.615850e-47 |
Msa0525930 | Msa0584370 | 0.816064 | 6.703793e-52 | -8.615850e-47 |
Msa0525930 | Msa0652600 | 0.804316 | 2.290236e-49 | -8.615850e-47 |
Msa0525930 | Msa0698280 | 0.822075 | 2.875581e-53 | -8.615850e-47 |
Msa0525930 | Msa0789220 | 0.806036 | 9.996187e-50 | -8.615850e-47 |
Msa0525930 | Msa0826380 | 0.802057 | 6.721102e-49 | -8.615850e-47 |
Msa0525930 | Msa0933940 | 0.803328 | 3.674579e-49 | -8.615850e-47 |
Msa0525930 | Msa1041250 | 0.824392 | 8.275006e-54 | -8.615850e-47 |
Msa0525930 | Msa1165670 | 0.803033 | 4.228487e-49 | -8.615850e-47 |
Msa0525930 | Msa1179340 | 0.824479 | 7.893635e-54 | -8.615850e-47 |
Msa0525930 | Msa1233090 | 0.812453 | 4.207965e-51 | -8.615850e-47 |
Msa0525930 | Msa1366480 | 0.818236 | 2.178026e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525930 | MtrunA17_Chr1g0166281 | 100.000 | 150 | 0 | 0 | 1 | 150 | 1 | 150 | 4.78e-105 | 296 |
Msa0525930 | MtrunA17_Chr1g0188171 | 86.577 | 149 | 20 | 0 | 1 | 149 | 1 | 149 | 1.25e-91 | 262 |
Msa0525930 | MtrunA17_Chr3g0093271 | 78.912 | 147 | 31 | 0 | 1 | 147 | 52 | 198 | 8.03e-84 | 244 |
Msa0525930 | MtrunA17_Chr3g0093271 | 47.692 | 65 | 34 | 0 | 12 | 76 | 136 | 200 | 1.02e-11 | 60.1 |
Msa0525930 | MtrunA17_Chr6g0460211 | 78.378 | 148 | 32 | 0 | 1 | 148 | 1 | 148 | 2.68e-83 | 241 |
Msa0525930 | MtrunA17_Chr6g0460211 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 4.14e-12 | 60.1 |
Msa0525930 | MtrunA17_Chr5g0440931 | 77.703 | 148 | 33 | 0 | 1 | 148 | 1 | 148 | 1.42e-82 | 239 |
Msa0525930 | MtrunA17_Chr5g0440931 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 4.19e-12 | 60.1 |
Msa0525930 | MtrunA17_Chr7g0254731 | 77.027 | 148 | 34 | 0 | 1 | 148 | 1 | 148 | 1.26e-81 | 237 |
Msa0525930 | MtrunA17_Chr7g0254731 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 3.29e-12 | 60.5 |
Msa0525930 | MtrunA17_Chr7g0274101 | 67.114 | 149 | 49 | 0 | 1 | 149 | 1 | 149 | 6.31e-61 | 184 |
Msa0525930 | MtrunA17_Chr1g0185001 | 61.905 | 147 | 55 | 1 | 1 | 147 | 1 | 146 | 2.20e-60 | 183 |
Msa0525930 | MtrunA17_Chr5g0398751 | 42.568 | 148 | 83 | 1 | 1 | 148 | 1 | 146 | 3.52e-40 | 132 |
Msa0525930 | MtrunA17_Chr8g0366401 | 43.537 | 147 | 80 | 1 | 5 | 148 | 10 | 156 | 4.02e-40 | 132 |
Msa0525930 | MtrunA17_Chr3g0100541 | 48.667 | 150 | 62 | 1 | 1 | 150 | 41 | 175 | 1.35e-38 | 129 |
Msa0525930 | MtrunA17_Chr7g0245231 | 45.205 | 146 | 80 | 0 | 5 | 150 | 23 | 168 | 9.43e-38 | 126 |
Msa0525930 | MtrunA17_Chr1g0161211 | 49.265 | 136 | 69 | 0 | 12 | 147 | 46 | 181 | 3.47e-36 | 123 |
Msa0525930 | MtrunA17_Chr1g0161211 | 42.857 | 77 | 44 | 0 | 69 | 145 | 30 | 106 | 6.67e-15 | 68.6 |
Msa0525930 | MtrunA17_Chr4g0062221 | 42.553 | 141 | 79 | 1 | 8 | 146 | 7 | 147 | 1.59e-34 | 118 |
Msa0525930 | MtrunA17_Chr4g0062221 | 43.421 | 76 | 39 | 2 | 2 | 76 | 78 | 150 | 2.48e-12 | 61.2 |
Msa0525930 | MtrunA17_Chr6g0450921 | 45.185 | 135 | 74 | 0 | 12 | 146 | 29 | 163 | 1.78e-34 | 118 |
Msa0525930 | MtrunA17_Chr6g0450921 | 44.444 | 63 | 35 | 0 | 84 | 146 | 28 | 90 | 4.16e-11 | 57.8 |
Msa0525930 | MtrunA17_Chr8g0392951 | 46.667 | 135 | 71 | 1 | 12 | 146 | 24 | 157 | 1.16e-32 | 113 |
Msa0525930 | MtrunA17_Chr8g0368681 | 41.216 | 148 | 85 | 1 | 1 | 146 | 1 | 148 | 3.79e-32 | 112 |
Msa0525930 | MtrunA17_Chr8g0368681 | 38.356 | 73 | 42 | 1 | 4 | 76 | 82 | 151 | 6.90e-11 | 57.0 |
Msa0525930 | MtrunA17_Chr8g0391691 | 47.328 | 131 | 69 | 0 | 12 | 142 | 36 | 166 | 5.99e-32 | 112 |
Msa0525930 | MtrunA17_Chr8g0391691 | 51.515 | 66 | 31 | 1 | 5 | 69 | 101 | 166 | 1.01e-13 | 65.1 |
Msa0525930 | MtrunA17_Chr3g0100511 | 43.448 | 145 | 67 | 1 | 1 | 145 | 41 | 170 | 1.84e-31 | 110 |
Msa0525930 | MtrunA17_Chr5g0434951 | 42.222 | 135 | 77 | 1 | 12 | 146 | 4 | 137 | 2.46e-30 | 107 |
Msa0525930 | MtrunA17_Chr4g0033601 | 42.553 | 141 | 79 | 1 | 12 | 150 | 5 | 145 | 9.38e-30 | 105 |
Msa0525930 | MtrunA17_Chr3g0100561 | 42.069 | 145 | 69 | 1 | 1 | 145 | 41 | 170 | 6.90e-29 | 104 |
Msa0525930 | MtrunA17_Chr6g0482731 | 45.255 | 137 | 71 | 3 | 12 | 146 | 26 | 160 | 7.14e-29 | 104 |
Msa0525930 | MtrunA17_Chr6g0482731 | 38.667 | 75 | 46 | 0 | 13 | 87 | 100 | 174 | 9.06e-11 | 57.0 |
Msa0525930 | MtrunA17_Chr1g0169581 | 40.876 | 137 | 79 | 1 | 12 | 146 | 4 | 140 | 1.64e-28 | 102 |
Msa0525930 | MtrunA17_Chr3g0111371 | 44.444 | 135 | 71 | 2 | 12 | 146 | 5 | 135 | 2.16e-27 | 99.4 |
Msa0525930 | MtrunA17_Chr5g0397101 | 37.838 | 148 | 86 | 3 | 1 | 146 | 360 | 503 | 2.67e-26 | 103 |
Msa0525930 | MtrunA17_Chr7g0256701 | 41.844 | 141 | 77 | 3 | 11 | 146 | 72 | 212 | 4.83e-26 | 98.2 |
Msa0525930 | MtrunA17_Chr4g0074811 | 37.584 | 149 | 89 | 3 | 1 | 148 | 385 | 530 | 7.05e-26 | 102 |
Msa0525930 | MtrunA17_Chr5g0444171 | 38.255 | 149 | 88 | 3 | 1 | 148 | 386 | 531 | 1.80e-25 | 100 |
Msa0525930 | MtrunA17_Chr4g0059951 | 39.333 | 150 | 86 | 4 | 1 | 148 | 367 | 513 | 3.32e-25 | 100 |
Msa0525930 | MtrunA17_Chr8g0387671 | 37.162 | 148 | 87 | 3 | 1 | 146 | 360 | 503 | 2.40e-24 | 97.4 |
Msa0525930 | MtrunA17_Chr7g0256171 | 45.255 | 137 | 73 | 1 | 12 | 146 | 5 | 141 | 3.50e-24 | 91.7 |
Msa0525930 | MtrunA17_Chr8g0351681 | 41.497 | 147 | 77 | 4 | 12 | 150 | 49 | 194 | 4.42e-24 | 92.4 |
Msa0525930 | MtrunA17_Chr7g0242561 | 36.486 | 148 | 93 | 1 | 1 | 148 | 350 | 496 | 4.80e-24 | 96.7 |
Msa0525930 | MtrunA17_Chr1g0200601 | 40.541 | 148 | 81 | 3 | 1 | 146 | 324 | 466 | 6.28e-24 | 96.3 |
Msa0525930 | MtrunA17_Chr3g0098951 | 37.013 | 154 | 90 | 3 | 1 | 148 | 377 | 529 | 6.62e-24 | 96.3 |
Msa0525930 | MtrunA17_Chr4g0064231 | 40.127 | 157 | 76 | 3 | 12 | 150 | 64 | 220 | 8.27e-24 | 92.4 |
Msa0525930 | MtrunA17_Chr1g0176751 | 35.616 | 146 | 91 | 2 | 1 | 146 | 418 | 560 | 1.16e-23 | 95.9 |
Msa0525930 | MtrunA17_Chr8g0385341 | 36.986 | 146 | 89 | 2 | 1 | 146 | 324 | 466 | 3.29e-23 | 94.4 |
Msa0525930 | MtrunA17_Chr3g0100471 | 56.338 | 71 | 31 | 0 | 5 | 75 | 45 | 115 | 3.43e-23 | 87.8 |
Msa0525930 | MtrunA17_Chr1g0157131 | 35.135 | 148 | 90 | 3 | 1 | 146 | 368 | 511 | 4.94e-23 | 94.0 |
Msa0525930 | MtrunA17_Chr7g0267751 | 37.671 | 146 | 88 | 2 | 1 | 146 | 429 | 571 | 5.63e-23 | 94.0 |
Msa0525930 | MtrunA17_Chr7g0245911 | 38.356 | 146 | 81 | 3 | 12 | 148 | 47 | 192 | 6.96e-23 | 89.4 |
Msa0525930 | MtrunA17_Chr3g0131181 | 36.301 | 146 | 90 | 2 | 1 | 146 | 323 | 465 | 7.68e-23 | 93.2 |
Msa0525930 | MtrunA17_Chr1g0169621 | 34.756 | 164 | 80 | 3 | 12 | 148 | 4 | 167 | 1.65e-22 | 87.8 |
Msa0525930 | MtrunA17_Chr7g0225921 | 33.333 | 141 | 92 | 2 | 8 | 147 | 2 | 141 | 9.34e-22 | 85.1 |
Msa0525930 | MtrunA17_Chr0c02g0489761 | 35.135 | 148 | 90 | 3 | 1 | 146 | 372 | 515 | 1.40e-21 | 89.7 |
Msa0525930 | MtrunA17_Chr5g0441691 | 34.459 | 148 | 91 | 3 | 1 | 146 | 362 | 505 | 3.15e-21 | 88.6 |
Msa0525930 | MtrunA17_Chr3g0116141 | 35.433 | 127 | 81 | 1 | 20 | 146 | 13 | 138 | 4.82e-21 | 83.2 |
Msa0525930 | MtrunA17_Chr3g0116151 | 35.433 | 127 | 81 | 1 | 20 | 146 | 14 | 139 | 4.94e-21 | 83.2 |
Msa0525930 | MtrunA17_Chr5g0402331 | 35.762 | 151 | 89 | 3 | 2 | 148 | 38 | 184 | 1.01e-20 | 83.6 |
Msa0525930 | MtrunA17_Chr7g0245371 | 37.333 | 150 | 82 | 2 | 11 | 148 | 23 | 172 | 1.65e-20 | 82.8 |
Msa0525930 | MtrunA17_Chr5g0448721 | 34.247 | 146 | 93 | 2 | 1 | 146 | 390 | 532 | 2.35e-20 | 86.3 |
Msa0525930 | MtrunA17_Chr4g0033371 | 37.086 | 151 | 91 | 3 | 1 | 150 | 366 | 513 | 2.39e-20 | 86.3 |
Msa0525930 | MtrunA17_Chr1g0170281 | 34.247 | 146 | 93 | 2 | 1 | 146 | 412 | 554 | 3.33e-20 | 85.9 |
Msa0525930 | MtrunA17_Chr4g0044961 | 36.296 | 135 | 84 | 1 | 12 | 146 | 57 | 189 | 3.96e-20 | 82.0 |
Msa0525930 | MtrunA17_Chr4g0057641 | 35.294 | 136 | 87 | 1 | 11 | 146 | 5 | 139 | 4.53e-20 | 80.5 |
Msa0525930 | MtrunA17_Chr5g0402361 | 37.143 | 140 | 81 | 2 | 12 | 148 | 48 | 183 | 4.54e-20 | 84.7 |
Msa0525930 | MtrunA17_Chr5g0402361 | 35.762 | 151 | 89 | 3 | 2 | 148 | 210 | 356 | 1.22e-19 | 83.6 |
Msa0525930 | MtrunA17_Chr5g0402361 | 30.061 | 163 | 86 | 3 | 12 | 146 | 120 | 282 | 5.82e-14 | 67.8 |
Msa0525930 | MtrunA17_Chr4g0057651 | 34.559 | 136 | 88 | 1 | 11 | 146 | 5 | 139 | 1.04e-19 | 79.7 |
Msa0525930 | MtrunA17_Chr6g0459231 | 32.143 | 140 | 94 | 1 | 8 | 147 | 4 | 142 | 1.92e-19 | 79.0 |
Msa0525930 | MtrunA17_Chr8g0373691 | 35.915 | 142 | 88 | 3 | 6 | 146 | 48 | 187 | 2.64e-19 | 79.7 |
Msa0525930 | MtrunA17_Chr8g0373691 | 42.254 | 71 | 38 | 1 | 79 | 146 | 44 | 114 | 6.77e-11 | 57.8 |
Msa0525930 | MtrunA17_Chr2g0329371 | 38.129 | 139 | 82 | 2 | 12 | 146 | 64 | 202 | 4.25e-19 | 79.7 |
Msa0525930 | MtrunA17_Chr5g0409441 | 31.852 | 135 | 92 | 0 | 8 | 142 | 18 | 152 | 5.20e-19 | 78.6 |
Msa0525930 | MtrunA17_Chr3g0100461 | 61.111 | 54 | 21 | 0 | 93 | 146 | 53 | 106 | 5.46e-19 | 77.0 |
Msa0525930 | MtrunA17_Chr3g0100461 | 50.000 | 56 | 28 | 0 | 20 | 75 | 53 | 108 | 1.14e-11 | 58.2 |
Msa0525930 | MtrunA17_Chr4g0057661 | 33.824 | 136 | 89 | 1 | 11 | 146 | 5 | 139 | 3.11e-18 | 75.9 |
Msa0525930 | MtrunA17_Chr4g0074791 | 32.653 | 147 | 84 | 5 | 1 | 146 | 390 | 522 | 8.66e-18 | 79.0 |
Msa0525930 | MtrunA17_Chr7g0257751 | 30.822 | 146 | 100 | 1 | 1 | 146 | 352 | 496 | 1.29e-17 | 78.6 |
Msa0525930 | MtrunA17_Chr3g0100501 | 51.613 | 62 | 30 | 0 | 83 | 144 | 70 | 131 | 1.67e-17 | 73.9 |
Msa0525930 | MtrunA17_Chr5g0405421 | 29.870 | 154 | 96 | 5 | 1 | 148 | 395 | 542 | 2.88e-17 | 77.4 |
Msa0525930 | MtrunA17_Chr1g0173541 | 28.767 | 146 | 103 | 1 | 1 | 146 | 346 | 490 | 2.14e-16 | 75.1 |
Msa0525930 | MtrunA17_Chr1g0176421 | 33.094 | 139 | 90 | 2 | 1 | 139 | 455 | 590 | 1.91e-15 | 72.4 |
Msa0525930 | MtrunA17_Chr3g0121191 | 33.088 | 136 | 81 | 1 | 12 | 147 | 93 | 218 | 7.08e-15 | 68.9 |
Msa0525930 | MtrunA17_Chr3g0121191 | 41.176 | 68 | 40 | 0 | 6 | 73 | 150 | 217 | 8.22e-11 | 58.2 |
Msa0525930 | MtrunA17_Chr5g0396261 | 34.513 | 113 | 70 | 3 | 36 | 145 | 1 | 112 | 2.03e-14 | 65.5 |
Msa0525930 | MtrunA17_Chr3g0125311 | 32.394 | 142 | 78 | 5 | 21 | 147 | 22 | 160 | 1.67e-12 | 61.6 |
Msa0525930 | MtrunA17_Chr7g0252401 | 25.532 | 141 | 99 | 1 | 7 | 147 | 30 | 164 | 3.94e-12 | 62.8 |
Msa0525930 | MtrunA17_Chr4g0068501 | 27.273 | 143 | 94 | 3 | 11 | 146 | 15 | 154 | 1.29e-11 | 59.3 |
Msa0525930 | MtrunA17_Chr2g0333301 | 26.797 | 153 | 98 | 5 | 3 | 150 | 22 | 165 | 1.70e-11 | 58.9 |
Msa0525930 | MtrunA17_Chr1g0160151 | 31.429 | 140 | 76 | 4 | 20 | 147 | 30 | 161 | 2.90e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525930 | AT3G22930.1 | 84.247 | 146 | 23 | 0 | 5 | 150 | 28 | 173 | 7.45e-88 | 254 |
Msa0525930 | AT4G14640.1 | 83.448 | 145 | 24 | 0 | 5 | 149 | 6 | 150 | 1.24e-86 | 250 |
Msa0525930 | AT2G27030.3 | 79.054 | 148 | 31 | 0 | 1 | 148 | 1 | 148 | 1.11e-83 | 244 |
Msa0525930 | AT2G27030.3 | 46.269 | 67 | 36 | 0 | 12 | 78 | 85 | 151 | 5.36e-12 | 60.8 |
Msa0525930 | AT3G56800.1 | 79.054 | 148 | 31 | 0 | 1 | 148 | 1 | 148 | 2.52e-83 | 241 |
Msa0525930 | AT3G56800.1 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 6.91e-12 | 60.1 |
Msa0525930 | AT2G41110.1 | 79.054 | 148 | 31 | 0 | 1 | 148 | 1 | 148 | 2.52e-83 | 241 |
Msa0525930 | AT2G41110.1 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 6.91e-12 | 60.1 |
Msa0525930 | AT2G27030.1 | 79.054 | 148 | 31 | 0 | 1 | 148 | 1 | 148 | 2.52e-83 | 241 |
Msa0525930 | AT2G27030.1 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 6.91e-12 | 60.1 |
Msa0525930 | AT3G43810.1 | 78.378 | 148 | 32 | 0 | 1 | 148 | 1 | 148 | 3.70e-83 | 241 |
Msa0525930 | AT3G43810.1 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 5.72e-12 | 60.1 |
Msa0525930 | AT3G43810.2 | 78.378 | 148 | 32 | 0 | 1 | 148 | 1 | 148 | 9.33e-83 | 243 |
Msa0525930 | AT5G21274.1 | 77.703 | 148 | 33 | 0 | 1 | 148 | 1 | 148 | 1.35e-82 | 239 |
Msa0525930 | AT5G21274.1 | 46.154 | 65 | 35 | 0 | 12 | 76 | 85 | 149 | 1.69e-11 | 58.9 |
Msa0525930 | AT1G66410.1 | 77.703 | 148 | 33 | 0 | 1 | 148 | 1 | 148 | 4.61e-82 | 238 |
Msa0525930 | AT1G66410.1 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 2.15e-12 | 61.2 |
Msa0525930 | AT5G37780.1 | 77.703 | 148 | 33 | 0 | 1 | 148 | 1 | 148 | 4.61e-82 | 238 |
Msa0525930 | AT5G37780.1 | 47.692 | 65 | 34 | 0 | 12 | 76 | 85 | 149 | 2.15e-12 | 61.2 |
Msa0525930 | AT2G41110.2 | 73.125 | 160 | 31 | 1 | 1 | 148 | 1 | 160 | 9.26e-80 | 233 |
Msa0525930 | AT2G41110.2 | 47.692 | 65 | 34 | 0 | 12 | 76 | 97 | 161 | 9.19e-12 | 59.7 |
Msa0525930 | AT5G37780.2 | 70.552 | 163 | 33 | 1 | 1 | 148 | 1 | 163 | 1.55e-77 | 228 |
Msa0525930 | AT5G37780.2 | 47.692 | 65 | 34 | 0 | 12 | 76 | 100 | 164 | 4.28e-12 | 60.8 |
Msa0525930 | AT5G37780.3 | 66.092 | 174 | 33 | 1 | 1 | 148 | 1 | 174 | 6.24e-76 | 224 |
Msa0525930 | AT5G37780.3 | 47.692 | 65 | 34 | 0 | 12 | 76 | 111 | 175 | 4.91e-12 | 60.8 |
Msa0525930 | AT1G66410.2 | 72.785 | 158 | 33 | 1 | 1 | 148 | 1 | 158 | 1.73e-73 | 217 |
Msa0525930 | AT1G66410.2 | 47.692 | 65 | 34 | 0 | 12 | 76 | 95 | 159 | 4.35e-12 | 60.8 |
Msa0525930 | AT4G14640.2 | 83.871 | 124 | 20 | 0 | 26 | 149 | 9 | 132 | 1.85e-73 | 216 |
Msa0525930 | AT4G14640.2 | 45.161 | 62 | 34 | 0 | 12 | 73 | 68 | 129 | 2.32e-11 | 58.2 |
Msa0525930 | AT5G37780.4 | 79.675 | 123 | 25 | 0 | 26 | 148 | 13 | 135 | 1.58e-69 | 206 |
Msa0525930 | AT5G37780.4 | 47.692 | 65 | 34 | 0 | 12 | 76 | 72 | 136 | 3.05e-12 | 60.5 |
Msa0525930 | AT3G43810.4 | 80.357 | 112 | 22 | 0 | 37 | 148 | 1 | 112 | 1.79e-63 | 190 |
Msa0525930 | AT3G43810.4 | 47.692 | 65 | 34 | 0 | 12 | 76 | 49 | 113 | 1.73e-12 | 60.5 |
Msa0525930 | AT3G43810.3 | 80.357 | 112 | 22 | 0 | 37 | 148 | 1 | 112 | 1.79e-63 | 190 |
Msa0525930 | AT3G43810.3 | 47.692 | 65 | 34 | 0 | 12 | 76 | 49 | 113 | 1.73e-12 | 60.5 |
Msa0525930 | AT1G66410.4 | 80.357 | 112 | 22 | 0 | 37 | 148 | 1 | 112 | 3.95e-63 | 189 |
Msa0525930 | AT1G66410.4 | 47.692 | 65 | 34 | 0 | 12 | 76 | 49 | 113 | 6.49e-13 | 61.6 |
Msa0525930 | AT1G66410.3 | 80.357 | 112 | 22 | 0 | 37 | 148 | 1 | 112 | 3.95e-63 | 189 |
Msa0525930 | AT1G66410.3 | 47.692 | 65 | 34 | 0 | 12 | 76 | 49 | 113 | 6.49e-13 | 61.6 |
Msa0525930 | AT4G14640.3 | 81.553 | 103 | 19 | 0 | 5 | 107 | 6 | 108 | 1.16e-58 | 178 |
Msa0525930 | AT3G22930.2 | 79.808 | 104 | 21 | 0 | 5 | 108 | 28 | 131 | 2.56e-57 | 175 |
Msa0525930 | AT2G41090.1 | 53.061 | 147 | 66 | 1 | 1 | 147 | 1 | 144 | 2.77e-48 | 154 |
Msa0525930 | AT2G41100.7 | 50.920 | 163 | 63 | 2 | 1 | 146 | 55 | 217 | 3.99e-44 | 147 |
Msa0525930 | AT2G41100.7 | 40.945 | 127 | 59 | 2 | 36 | 146 | 1 | 127 | 2.29e-25 | 98.2 |
Msa0525930 | AT2G41100.7 | 52.688 | 93 | 41 | 1 | 5 | 97 | 149 | 238 | 2.87e-24 | 95.5 |
Msa0525930 | AT2G41100.6 | 50.920 | 163 | 63 | 2 | 1 | 146 | 55 | 217 | 3.99e-44 | 147 |
Msa0525930 | AT2G41100.6 | 40.945 | 127 | 59 | 2 | 36 | 146 | 1 | 127 | 2.29e-25 | 98.2 |
Msa0525930 | AT2G41100.6 | 52.688 | 93 | 41 | 1 | 5 | 97 | 149 | 238 | 2.87e-24 | 95.5 |
Msa0525930 | AT2G41100.3 | 50.920 | 163 | 63 | 2 | 1 | 146 | 55 | 217 | 3.99e-44 | 147 |
Msa0525930 | AT2G41100.3 | 40.945 | 127 | 59 | 2 | 36 | 146 | 1 | 127 | 2.29e-25 | 98.2 |
Msa0525930 | AT2G41100.3 | 52.688 | 93 | 41 | 1 | 5 | 97 | 149 | 238 | 2.87e-24 | 95.5 |
Msa0525930 | AT3G51920.1 | 48.649 | 148 | 76 | 0 | 1 | 148 | 1 | 148 | 7.72e-44 | 142 |
Msa0525930 | AT2G41100.4 | 50.920 | 163 | 63 | 2 | 1 | 146 | 90 | 252 | 8.87e-44 | 147 |
Msa0525930 | AT2G41100.4 | 45.062 | 162 | 73 | 2 | 1 | 146 | 1 | 162 | 4.21e-41 | 140 |
Msa0525930 | AT2G41100.4 | 52.688 | 93 | 41 | 1 | 5 | 97 | 184 | 273 | 5.04e-24 | 95.5 |
Msa0525930 | AT2G41100.1 | 50.920 | 163 | 63 | 2 | 1 | 146 | 90 | 252 | 8.87e-44 | 147 |
Msa0525930 | AT2G41100.1 | 45.062 | 162 | 73 | 2 | 1 | 146 | 1 | 162 | 4.21e-41 | 140 |
Msa0525930 | AT2G41100.1 | 52.688 | 93 | 41 | 1 | 5 | 97 | 184 | 273 | 5.04e-24 | 95.5 |
Msa0525930 | AT1G62820.1 | 42.361 | 144 | 81 | 1 | 5 | 148 | 6 | 147 | 6.42e-39 | 129 |
Msa0525930 | AT1G12310.1 | 41.667 | 144 | 82 | 1 | 5 | 148 | 6 | 147 | 3.15e-38 | 127 |
Msa0525930 | AT3G50360.1 | 47.407 | 135 | 71 | 0 | 12 | 146 | 27 | 161 | 1.24e-37 | 126 |
Msa0525930 | AT3G50360.1 | 44.776 | 67 | 37 | 0 | 80 | 146 | 22 | 88 | 3.60e-12 | 61.2 |
Msa0525930 | AT1G32250.1 | 41.892 | 148 | 80 | 2 | 5 | 146 | 9 | 156 | 1.95e-36 | 123 |
Msa0525930 | AT1G66400.1 | 48.227 | 141 | 71 | 1 | 12 | 150 | 15 | 155 | 7.61e-36 | 121 |
Msa0525930 | AT1G66400.1 | 41.176 | 68 | 40 | 0 | 6 | 73 | 84 | 151 | 2.82e-11 | 58.5 |
Msa0525930 | AT1G18530.1 | 42.254 | 142 | 80 | 1 | 7 | 146 | 2 | 143 | 6.56e-34 | 117 |
Msa0525930 | AT1G18530.1 | 43.836 | 73 | 38 | 1 | 4 | 76 | 77 | 146 | 1.05e-12 | 62.4 |
Msa0525930 | AT5G37770.1 | 46.853 | 143 | 72 | 1 | 12 | 150 | 17 | 159 | 6.81e-34 | 117 |
Msa0525930 | AT5G37770.2 | 46.853 | 143 | 72 | 1 | 12 | 150 | 17 | 159 | 6.81e-34 | 117 |
Msa0525930 | AT4G37010.1 | 44.444 | 135 | 75 | 0 | 12 | 146 | 27 | 161 | 2.36e-33 | 115 |
Msa0525930 | AT4G37010.2 | 44.444 | 135 | 75 | 0 | 12 | 146 | 31 | 165 | 2.39e-33 | 115 |
Msa0525930 | AT1G24620.1 | 45.775 | 142 | 76 | 1 | 9 | 150 | 34 | 174 | 1.03e-32 | 114 |
Msa0525930 | AT3G03000.1 | 43.448 | 145 | 81 | 1 | 5 | 148 | 13 | 157 | 1.12e-32 | 114 |
Msa0525930 | AT3G25600.1 | 39.189 | 148 | 88 | 1 | 1 | 146 | 1 | 148 | 1.68e-30 | 108 |
Msa0525930 | AT3G25600.1 | 41.096 | 73 | 40 | 1 | 4 | 76 | 82 | 151 | 3.43e-12 | 60.8 |
Msa0525930 | AT1G18210.2 | 42.963 | 135 | 73 | 1 | 12 | 146 | 23 | 153 | 2.30e-29 | 105 |
Msa0525930 | AT1G18210.1 | 42.963 | 135 | 73 | 1 | 12 | 146 | 23 | 153 | 2.30e-29 | 105 |
Msa0525930 | AT2G41100.2 | 48.800 | 125 | 47 | 2 | 39 | 146 | 3 | 127 | 7.27e-29 | 105 |
Msa0525930 | AT2G41100.2 | 52.688 | 93 | 41 | 1 | 5 | 97 | 59 | 148 | 3.65e-25 | 95.9 |
Msa0525930 | AT1G73630.1 | 41.304 | 138 | 77 | 1 | 11 | 148 | 19 | 152 | 1.73e-28 | 103 |
Msa0525930 | AT1G05990.1 | 43.165 | 139 | 76 | 2 | 11 | 146 | 4 | 142 | 1.28e-27 | 100 |
Msa0525930 | AT2G43290.1 | 41.549 | 142 | 76 | 2 | 12 | 146 | 65 | 206 | 1.65e-27 | 102 |
Msa0525930 | AT1G76040.1 | 38.356 | 146 | 88 | 2 | 1 | 146 | 167 | 310 | 4.55e-27 | 103 |
Msa0525930 | AT1G76040.4 | 38.356 | 146 | 88 | 2 | 1 | 146 | 167 | 310 | 4.55e-27 | 103 |
Msa0525930 | AT2G41100.5 | 52.577 | 97 | 43 | 1 | 1 | 97 | 1 | 94 | 4.78e-27 | 99.0 |
Msa0525930 | AT2G41100.5 | 47.297 | 74 | 38 | 1 | 73 | 146 | 1 | 73 | 3.23e-15 | 68.6 |
Msa0525930 | AT3G10190.1 | 40.541 | 148 | 85 | 3 | 1 | 146 | 59 | 205 | 7.74e-27 | 100 |
Msa0525930 | AT2G15680.1 | 36.806 | 144 | 89 | 1 | 5 | 148 | 43 | 184 | 1.81e-26 | 98.6 |
Msa0525930 | AT1G76040.2 | 38.356 | 146 | 88 | 2 | 1 | 146 | 405 | 548 | 3.05e-26 | 103 |
Msa0525930 | AT4G04720.2 | 39.597 | 149 | 86 | 3 | 1 | 148 | 373 | 518 | 5.37e-26 | 102 |
Msa0525930 | AT4G04720.1 | 39.597 | 149 | 86 | 3 | 1 | 148 | 373 | 518 | 5.37e-26 | 102 |
Msa0525930 | AT3G59440.1 | 40.714 | 140 | 80 | 2 | 11 | 148 | 50 | 188 | 2.96e-25 | 95.9 |
Msa0525930 | AT3G59440.1 | 45.946 | 74 | 38 | 1 | 2 | 73 | 113 | 186 | 2.51e-11 | 59.3 |
Msa0525930 | AT4G21940.1 | 38.255 | 149 | 88 | 3 | 1 | 148 | 395 | 540 | 4.53e-25 | 100 |
Msa0525930 | AT4G21940.2 | 38.255 | 149 | 88 | 3 | 1 | 148 | 395 | 540 | 5.12e-25 | 100 |
Msa0525930 | AT1G35670.1 | 39.726 | 146 | 85 | 2 | 1 | 146 | 320 | 462 | 5.69e-25 | 99.8 |
Msa0525930 | AT4G23650.1 | 37.162 | 148 | 87 | 3 | 1 | 146 | 372 | 515 | 5.96e-25 | 99.8 |
Msa0525930 | AT4G03290.1 | 40.426 | 141 | 79 | 2 | 11 | 146 | 4 | 144 | 9.36e-25 | 93.6 |
Msa0525930 | AT4G03290.1 | 49.231 | 65 | 31 | 1 | 13 | 75 | 82 | 146 | 8.53e-13 | 62.4 |
Msa0525930 | AT5G23580.1 | 39.726 | 146 | 85 | 2 | 1 | 146 | 316 | 458 | 1.09e-24 | 99.0 |
Msa0525930 | AT5G17470.1 | 40.580 | 138 | 80 | 1 | 11 | 146 | 1 | 138 | 1.10e-24 | 93.2 |
Msa0525930 | AT3G50770.1 | 38.571 | 140 | 81 | 2 | 12 | 146 | 64 | 203 | 1.56e-24 | 94.4 |
Msa0525930 | AT3G50770.1 | 43.077 | 65 | 37 | 0 | 82 | 146 | 61 | 125 | 1.96e-11 | 59.7 |
Msa0525930 | AT4G09570.1 | 40.541 | 148 | 81 | 3 | 1 | 146 | 319 | 461 | 1.78e-24 | 98.2 |
Msa0525930 | AT5G19360.1 | 38.776 | 147 | 86 | 3 | 1 | 146 | 362 | 505 | 5.79e-24 | 97.1 |
Msa0525930 | AT4G12860.1 | 40.426 | 141 | 82 | 1 | 12 | 150 | 5 | 145 | 1.47e-23 | 90.1 |
Msa0525930 | AT4G04740.4 | 38.462 | 143 | 84 | 3 | 5 | 146 | 366 | 505 | 1.64e-23 | 95.5 |
Msa0525930 | AT4G04740.6 | 38.462 | 143 | 84 | 3 | 5 | 146 | 366 | 505 | 1.64e-23 | 95.5 |
Msa0525930 | AT4G04740.5 | 38.462 | 143 | 84 | 3 | 5 | 146 | 366 | 505 | 1.64e-23 | 95.5 |
Msa0525930 | AT4G04740.3 | 38.462 | 143 | 84 | 3 | 5 | 146 | 366 | 505 | 1.64e-23 | 95.5 |
Msa0525930 | AT4G04740.1 | 38.462 | 143 | 84 | 3 | 5 | 146 | 366 | 505 | 1.64e-23 | 95.5 |
Msa0525930 | AT4G04740.7 | 38.462 | 143 | 84 | 3 | 5 | 146 | 366 | 505 | 1.64e-23 | 95.5 |
Msa0525930 | AT5G12180.1 | 38.095 | 147 | 87 | 3 | 1 | 146 | 367 | 510 | 2.20e-23 | 95.1 |
Msa0525930 | AT4G04700.1 | 40.268 | 149 | 85 | 3 | 1 | 148 | 325 | 470 | 4.05e-23 | 94.4 |
Msa0525930 | AT4G04695.1 | 38.255 | 149 | 88 | 3 | 1 | 148 | 325 | 470 | 4.50e-23 | 94.4 |
Msa0525930 | AT3G07490.1 | 41.304 | 138 | 79 | 1 | 11 | 146 | 4 | 141 | 5.32e-23 | 89.0 |
Msa0525930 | AT1G61950.1 | 34.667 | 150 | 92 | 3 | 1 | 148 | 393 | 538 | 1.58e-22 | 92.8 |
Msa0525930 | AT2G36180.1 | 43.796 | 137 | 74 | 2 | 13 | 146 | 1 | 137 | 1.68e-22 | 87.4 |
Msa0525930 | AT3G20410.2 | 33.784 | 148 | 96 | 2 | 1 | 148 | 385 | 530 | 2.37e-22 | 92.4 |
Msa0525930 | AT3G20410.1 | 33.784 | 148 | 96 | 2 | 1 | 148 | 385 | 530 | 2.37e-22 | 92.4 |
Msa0525930 | AT2G41410.1 | 38.194 | 144 | 86 | 3 | 8 | 148 | 66 | 209 | 4.05e-22 | 88.2 |
Msa0525930 | AT4G38230.1 | 35.616 | 146 | 91 | 2 | 1 | 146 | 174 | 316 | 4.86e-22 | 90.1 |
Msa0525930 | AT4G38230.2 | 35.616 | 146 | 91 | 2 | 1 | 146 | 348 | 490 | 1.06e-21 | 90.5 |
Msa0525930 | AT4G38230.4 | 35.616 | 146 | 91 | 2 | 1 | 146 | 318 | 460 | 1.28e-21 | 90.1 |
Msa0525930 | AT4G38230.3 | 35.616 | 146 | 91 | 2 | 1 | 146 | 318 | 460 | 1.28e-21 | 90.1 |
Msa0525930 | AT2G17290.1 | 35.616 | 146 | 91 | 2 | 1 | 146 | 379 | 521 | 1.81e-21 | 89.7 |
Msa0525930 | AT2G17290.2 | 35.616 | 146 | 91 | 2 | 1 | 146 | 379 | 521 | 1.81e-21 | 89.7 |
Msa0525930 | AT1G50700.1 | 32.432 | 148 | 98 | 2 | 1 | 148 | 367 | 512 | 1.95e-21 | 89.7 |
Msa0525930 | AT3G51850.1 | 35.135 | 148 | 95 | 1 | 1 | 148 | 348 | 494 | 2.56e-21 | 89.4 |
Msa0525930 | AT3G03400.1 | 35.878 | 131 | 82 | 1 | 11 | 139 | 4 | 134 | 5.15e-21 | 83.2 |
Msa0525930 | AT2G38910.1 | 34.000 | 150 | 96 | 2 | 1 | 150 | 428 | 574 | 1.67e-20 | 87.0 |
Msa0525930 | AT3G10660.2 | 32.877 | 146 | 95 | 2 | 1 | 146 | 480 | 622 | 1.74e-20 | 87.0 |
Msa0525930 | AT3G10660.1 | 32.877 | 146 | 95 | 2 | 1 | 146 | 480 | 622 | 1.74e-20 | 87.0 |
Msa0525930 | AT5G04870.1 | 33.562 | 146 | 94 | 2 | 1 | 146 | 444 | 586 | 2.32e-20 | 86.7 |
Msa0525930 | AT1G74740.1 | 35.374 | 147 | 92 | 3 | 1 | 146 | 353 | 497 | 7.87e-20 | 85.1 |
Msa0525930 | AT5G12480.2 | 35.374 | 147 | 93 | 2 | 1 | 146 | 259 | 404 | 8.63e-20 | 84.7 |
Msa0525930 | AT4G35310.2 | 32.877 | 146 | 95 | 2 | 1 | 146 | 391 | 533 | 1.05e-19 | 84.7 |
Msa0525930 | AT4G35310.1 | 32.877 | 146 | 95 | 2 | 1 | 146 | 391 | 533 | 1.05e-19 | 84.7 |
Msa0525930 | AT5G12480.1 | 35.374 | 147 | 93 | 2 | 1 | 146 | 353 | 498 | 1.30e-19 | 84.7 |
Msa0525930 | AT3G03410.1 | 36.496 | 137 | 76 | 2 | 14 | 150 | 4 | 129 | 3.11e-19 | 78.6 |
Msa0525930 | AT4G04710.3 | 35.374 | 147 | 91 | 3 | 1 | 146 | 312 | 455 | 5.09e-19 | 82.8 |
Msa0525930 | AT4G04710.2 | 35.374 | 147 | 91 | 3 | 1 | 146 | 326 | 469 | 5.47e-19 | 82.8 |
Msa0525930 | AT4G20780.1 | 34.591 | 159 | 84 | 2 | 11 | 149 | 28 | 186 | 5.98e-19 | 79.3 |
Msa0525930 | AT4G04710.1 | 35.374 | 147 | 91 | 3 | 1 | 146 | 339 | 482 | 6.02e-19 | 82.8 |
Msa0525930 | AT3G57530.1 | 34.228 | 149 | 94 | 3 | 1 | 148 | 357 | 502 | 6.50e-19 | 82.4 |
Msa0525930 | AT1G18890.1 | 36.486 | 148 | 89 | 4 | 1 | 146 | 357 | 501 | 3.73e-18 | 80.5 |
Msa0525930 | AT5G19450.2 | 34.014 | 147 | 95 | 2 | 1 | 146 | 351 | 496 | 7.58e-18 | 79.3 |
Msa0525930 | AT5G19450.1 | 34.014 | 147 | 95 | 2 | 1 | 146 | 351 | 496 | 7.58e-18 | 79.3 |
Msa0525930 | AT4G04710.4 | 35.570 | 149 | 90 | 4 | 1 | 146 | 339 | 484 | 8.31e-18 | 79.3 |
Msa0525930 | AT5G42380.1 | 34.058 | 138 | 90 | 1 | 10 | 146 | 47 | 184 | 8.45e-18 | 76.3 |
Msa0525930 | AT1G50700.2 | 28.161 | 174 | 97 | 3 | 1 | 148 | 367 | 538 | 5.82e-17 | 77.0 |
Msa0525930 | AT5G44460.1 | 34.868 | 152 | 85 | 3 | 11 | 149 | 27 | 177 | 7.77e-17 | 73.6 |
Msa0525930 | AT4G04740.2 | 35.659 | 129 | 79 | 3 | 5 | 132 | 366 | 491 | 1.63e-16 | 75.9 |
Msa0525930 | AT2G31500.1 | 32.450 | 151 | 98 | 3 | 1 | 148 | 360 | 509 | 1.94e-16 | 75.5 |
Msa0525930 | AT2G41860.2 | 31.081 | 148 | 101 | 1 | 1 | 148 | 348 | 494 | 5.03e-16 | 74.3 |
Msa0525930 | AT2G41860.1 | 31.081 | 148 | 101 | 1 | 1 | 148 | 348 | 494 | 5.44e-16 | 74.3 |
Msa0525930 | AT5G66210.1 | 27.922 | 154 | 99 | 5 | 1 | 148 | 358 | 505 | 6.08e-16 | 73.9 |
Msa0525930 | AT5G66210.2 | 27.922 | 154 | 99 | 5 | 1 | 148 | 358 | 505 | 6.08e-16 | 73.9 |
Msa0525930 | AT3G51850.2 | 37.736 | 106 | 65 | 1 | 1 | 106 | 348 | 452 | 1.07e-15 | 73.2 |
Msa0525930 | AT2G17890.1 | 26.623 | 154 | 101 | 5 | 1 | 148 | 404 | 551 | 4.24e-15 | 71.6 |
Msa0525930 | AT4G21940.3 | 38.384 | 99 | 60 | 1 | 1 | 99 | 395 | 492 | 6.02e-15 | 71.2 |
Msa0525930 | AT1G76040.3 | 35.644 | 101 | 64 | 1 | 1 | 101 | 405 | 504 | 5.17e-14 | 68.6 |
Msa0525930 | AT1G76640.1 | 28.873 | 142 | 99 | 1 | 7 | 146 | 17 | 158 | 9.15e-14 | 65.1 |
Msa0525930 | AT1G76650.1 | 32.143 | 140 | 94 | 1 | 7 | 146 | 38 | 176 | 1.03e-13 | 65.5 |
Msa0525930 | AT1G76650.3 | 32.143 | 140 | 94 | 1 | 7 | 146 | 38 | 176 | 1.03e-13 | 65.5 |
Msa0525930 | AT1G21550.1 | 32.877 | 146 | 90 | 3 | 12 | 149 | 10 | 155 | 3.44e-13 | 63.5 |
Msa0525930 | AT1G50700.3 | 33.333 | 99 | 65 | 1 | 1 | 99 | 367 | 464 | 2.79e-12 | 63.5 |
Msa0525930 | AT5G66210.3 | 26.718 | 131 | 90 | 3 | 1 | 125 | 358 | 488 | 1.16e-11 | 61.6 |
Msa0525930 | AT4G36070.1 | 25.974 | 154 | 102 | 5 | 1 | 148 | 367 | 514 | 1.91e-11 | 61.2 |
Msa0525930 | AT4G36070.2 | 25.974 | 154 | 102 | 5 | 1 | 148 | 367 | 514 | 1.98e-11 | 61.2 |
Msa0525930 | AT5G49480.1 | 31.429 | 140 | 90 | 3 | 13 | 146 | 19 | 158 | 2.34e-11 | 58.9 |
Find 42 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTATTCAAATTTGTTAATT+TGG | 0.116892 | 3_4:-79569106 | Msa0525930:three_prime_UTR |
TGTTGAGTTCTTGAACTTAA+TGG | 0.156792 | 3_4:-79570750 | Msa0525930:CDS |
CTACTATTACTTAGTATATA+AGG | 0.182362 | 3_4:+79571357 | None:intergenic |
CAACCTCGTTTATCATTTCT+TGG | 0.231199 | 3_4:+79570801 | None:intergenic |
AGACACGTTATGATCAATTT+AGG | 0.232191 | 3_4:-79569279 | Msa0525930:CDS |
CTTCTTTGATCTCAACAATT+TGG | 0.239416 | 3_4:+79571156 | None:intergenic |
GGGGAATGAGATTAATTAAT+AGG | 0.283427 | 3_4:+79569081 | None:intergenic |
GATGATTAAAGAAGCAGATT+TGG | 0.325770 | 3_4:-79569226 | Msa0525930:CDS |
CTTGGAGCTCTTCCTCTGTT+GGG | 0.341743 | 3_4:+79570819 | None:intergenic |
GCATATACAAGCATATAAAA+TGG | 0.357393 | 3_4:-79571198 | Msa0525930:exon |
TCTTGGAGCTCTTCCTCTGT+TGG | 0.366378 | 3_4:+79570818 | None:intergenic |
TGCAACTGTAATTAGGTCAT+TGG | 0.376466 | 3_4:-79570849 | Msa0525930:CDS |
AGATCTCAAAGAGGCTTTCA+AGG | 0.399505 | 3_4:-79570603 | Msa0525930:CDS |
TACTATTACTTAGTATATAA+GGG | 0.400443 | 3_4:+79571358 | None:intergenic |
ATTATTATTATTTCTTGAAA+GGG | 0.411075 | 3_4:+79569061 | None:intergenic |
AAGAACTTGCAACTGTAATT+AGG | 0.411307 | 3_4:-79570856 | Msa0525930:CDS |
GAGGTTGATGCAGATGGAAA+TGG | 0.427391 | 3_4:-79570785 | Msa0525930:CDS |
TATTATTATTATTTCTTGAA+AGG | 0.432764 | 3_4:+79569060 | None:intergenic |
CAAGAACTCAACAAATTCAA+TGG | 0.441259 | 3_4:+79570760 | None:intergenic |
AATAGTAGTAAATTACATAT+AGG | 0.457280 | 3_4:-79571342 | Msa0525930:five_prime_UTR |
ATCTTTGTCAAACAAGCAAA+AGG | 0.476240 | 3_4:+79571133 | None:intergenic |
TGGGTGAGATGTCACTCTAA+TGG | 0.490912 | 3_4:+79568967 | None:intergenic |
GGATAGTTTATTTCATCCAA+TGG | 0.496741 | 3_4:+79569155 | None:intergenic |
TTTCAAACTTCAAAGAGTGT+TGG | 0.497299 | 3_4:-79571251 | Msa0525930:five_prime_UTR |
GAGTATAGCTCAATCTTAGC+TGG | 0.502101 | 3_4:+79571319 | None:intergenic |
GGGTGAGATGTCACTCTAAT+GGG | 0.510363 | 3_4:+79568968 | None:intergenic |
GTTAAGATGATGATGACCAT+TGG | 0.525117 | 3_4:-79569171 | Msa0525930:CDS |
TTATTATTATTTCTTGAAAG+GGG | 0.529534 | 3_4:+79569062 | None:intergenic |
GAAGCAGATTTGGACGGTGA+TGG | 0.535179 | 3_4:-79569216 | Msa0525930:CDS |
ATAAACGAGGTTGATGCAGA+TGG | 0.548616 | 3_4:-79570791 | Msa0525930:CDS |
AAATGATATATGTTAAATTG+TGG | 0.554936 | 3_4:+79569134 | None:intergenic |
TTTAATAGGTTGCATTACTG+TGG | 0.584530 | 3_4:-79570879 | Msa0525930:intron |
TGGTTATATTTCCGCTAGTG+AGG | 0.592900 | 3_4:-79570561 | Msa0525930:intron |
GTTGAACAAATCAAATGATG+TGG | 0.593439 | 3_4:+79568947 | None:intergenic |
GAGATGTCACTCTAATGGGT+TGG | 0.608545 | 3_4:+79568972 | None:intergenic |
ATTAAAGAAGCAGATTTGGA+CGG | 0.618310 | 3_4:-79569222 | Msa0525930:CDS |
TTGTTTGACAAAGATGGAGA+TGG | 0.622259 | 3_4:-79571125 | Msa0525930:intron |
TTGAACAAATCAAATGATGT+GGG | 0.623080 | 3_4:+79568948 | None:intergenic |
TGCAGATGAAGATCTCAAAG+AGG | 0.636781 | 3_4:-79570612 | Msa0525930:CDS |
ATATTTATATACCTCACTAG+CGG | 0.685027 | 3_4:+79570550 | None:intergenic |
ATTGGATCAAAACCCAACAG+AGG | 0.719116 | 3_4:-79570831 | Msa0525930:CDS |
GCTCCAAGAAATGATAAACG+AGG | 0.724641 | 3_4:-79570804 | Msa0525930:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATATTTCATAGTTTTAA+TGG | + | chr3_4:79570362-79570381 | None:intergenic | 10.0% |
!! | CATAAATACATAATTTAATA+TGG | + | chr3_4:79570969-79570988 | None:intergenic | 10.0% |
!!! | ATTATTATTATTTCTTGAAA+GGG | + | chr3_4:79571223-79571242 | None:intergenic | 10.0% |
!!! | TATTATTATTATTTCTTGAA+AGG | + | chr3_4:79571224-79571243 | None:intergenic | 10.0% |
!! | TACTATTACTTAGTATATAA+GGG | + | chr3_4:79568926-79568945 | None:intergenic | 15.0% |
!! | AATAGTAGTAAATTACATAT+AGG | - | chr3_4:79568939-79568958 | Msa0525930:three_prime_UTR | 15.0% |
!! | TATATAATTGAAGTGAAATA+TGG | + | chr3_4:79569217-79569236 | None:intergenic | 15.0% |
!!! | CAATTTTATCATATAGTATA+AGG | + | chr3_4:79569316-79569335 | None:intergenic | 15.0% |
!! | CTTTATGATTAATCTTTAAT+AGG | - | chr3_4:79569388-79569407 | Msa0525930:intron | 15.0% |
!!! | AATAATTACTTTCATTTTCT+TGG | + | chr3_4:79569557-79569576 | None:intergenic | 15.0% |
!!! | ATTCTTTAAAATGAAACTTT+TGG | - | chr3_4:79569812-79569831 | Msa0525930:intron | 15.0% |
!! | TTTCTTTGTATATAGAAAAA+AGG | - | chr3_4:79570024-79570043 | Msa0525930:intron | 15.0% |
!!! | TATTTATTTTTAATGAAGGA+GGG | + | chr3_4:79570102-79570121 | None:intergenic | 15.0% |
!!! | TTATTTATTTTTAATGAAGG+AGG | + | chr3_4:79570103-79570122 | None:intergenic | 15.0% |
!!! | AAGTTATTTTATAACTAATG+GGG | + | chr3_4:79570140-79570159 | None:intergenic | 15.0% |
!!! | GAAGTTATTTTATAACTAAT+GGG | + | chr3_4:79570141-79570160 | None:intergenic | 15.0% |
!!! | AGAAGTTATTTTATAACTAA+TGG | + | chr3_4:79570142-79570161 | None:intergenic | 15.0% |
!!! | TAAAATAACTTCTTTGTTAT+AGG | - | chr3_4:79570149-79570168 | Msa0525930:intron | 15.0% |
!! | AAATGATATATGTTAAATTG+TGG | + | chr3_4:79571150-79571169 | None:intergenic | 15.0% |
!!! | GTTATTCAAATTTGTTAATT+TGG | - | chr3_4:79571175-79571194 | Msa0525930:CDS | 15.0% |
!!! | TTATTATTATTTCTTGAAAG+GGG | + | chr3_4:79571222-79571241 | None:intergenic | 15.0% |
!!! | GTTTTATTATTTATTGTTTG+TGG | - | chr3_4:79571247-79571266 | Msa0525930:five_prime_UTR | 15.0% |
!! | CTACTATTACTTAGTATATA+AGG | + | chr3_4:79568927-79568946 | None:intergenic | 20.0% |
!! | CATTATTGTAAGAAATGAAA+GGG | + | chr3_4:79569584-79569603 | None:intergenic | 20.0% |
!! | ACATTATTGTAAGAAATGAA+AGG | + | chr3_4:79569585-79569604 | None:intergenic | 20.0% |
!!! | GTTTTTGATAAAGATCAAAA+TGG | - | chr3_4:79569700-79569719 | Msa0525930:intron | 20.0% |
!!! | TATATAAATATTTTCCTCTC+CGG | - | chr3_4:79569743-79569762 | Msa0525930:intron | 20.0% |
!! | AATCACTGTATAATTGTAAT+GGG | + | chr3_4:79569985-79570004 | None:intergenic | 20.0% |
!! | TAATCACTGTATAATTGTAA+TGG | + | chr3_4:79569986-79570005 | None:intergenic | 20.0% |
!! | CAATTATACAGTGATTAAAT+TGG | - | chr3_4:79569989-79570008 | Msa0525930:intron | 20.0% |
!! | AGATACATTATGATTATGAT+AGG | - | chr3_4:79570066-79570085 | Msa0525930:intron | 20.0% |
!!! | AGTTATTTTATAACTAATGG+GGG | + | chr3_4:79570139-79570158 | None:intergenic | 20.0% |
!! | ATGTGTGTCTATATATTAAA+TGG | - | chr3_4:79570747-79570766 | Msa0525930:CDS | 20.0% |
!! | TGTGTGTCTATATATTAAAT+GGG | - | chr3_4:79570748-79570767 | Msa0525930:CDS | 20.0% |
! | GCATATACAAGCATATAAAA+TGG | - | chr3_4:79569083-79569102 | Msa0525930:three_prime_UTR | 25.0% |
! | ATATTGTCAACAATCAAAGA+AGG | + | chr3_4:79569250-79569269 | None:intergenic | 25.0% |
! | ATATTTATATACCTCACTAG+CGG | + | chr3_4:79569734-79569753 | None:intergenic | 25.0% |
! | TAATCTAAACATGCATTAAC+CGG | + | chr3_4:79569765-79569784 | None:intergenic | 25.0% |
!! | CTAAAAAAAAGTGTAATGGA+AGG | + | chr3_4:79569953-79569972 | None:intergenic | 25.0% |
!!! | CTTCCATTACACTTTTTTTT+AGG | - | chr3_4:79569951-79569970 | Msa0525930:intron | 25.0% |
!! | TCACCTAAAAAAAAGTGTAA+TGG | + | chr3_4:79569957-79569976 | None:intergenic | 25.0% |
!! | TAACTTCTTTGTTATAGGAT+TGG | - | chr3_4:79570154-79570173 | Msa0525930:intron | 25.0% |
! | TTTATTGCATGTACAAAAAC+AGG | - | chr3_4:79570446-79570465 | Msa0525930:intron | 25.0% |
!! | CTATTATTATTCATCGATTG+CGG | + | chr3_4:79570621-79570640 | None:intergenic | 25.0% |
! | TGAAAAATTAACTGATGAAG+AGG | - | chr3_4:79571025-79571044 | Msa0525930:intron | 25.0% |
! | TTGAACAAATCAAATGATGT+GGG | + | chr3_4:79571336-79571355 | None:intergenic | 25.0% |
! | TCTAAAAAGAGAATAATCGT+TGG | + | chr3_4:79571361-79571380 | None:intergenic | 25.0% |
!! | AACGATTATTCTCTTTTTAG+AGG | - | chr3_4:79571360-79571379 | Msa0525930:five_prime_UTR | 25.0% |
! | TTTCAAACTTCAAAGAGTGT+TGG | - | chr3_4:79569030-79569049 | Msa0525930:three_prime_UTR | 30.0% |
CTTCTTTGATCTCAACAATT+TGG | + | chr3_4:79569128-79569147 | None:intergenic | 30.0% | |
ATCTTTGTCAAACAAGCAAA+AGG | + | chr3_4:79569151-79569170 | None:intergenic | 30.0% | |
! | TTTTGCTTGTTTGACAAAGA+TGG | - | chr3_4:79569150-79569169 | Msa0525930:exon | 30.0% |
CACATACACACATAATAAGT+TGG | - | chr3_4:79569340-79569359 | Msa0525930:intron | 30.0% | |
TTTAATAGGTTGCATTACTG+TGG | - | chr3_4:79569402-79569421 | Msa0525930:intron | 30.0% | |
AAGAACTTGCAACTGTAATT+AGG | - | chr3_4:79569425-79569444 | Msa0525930:intron | 30.0% | |
CAAGAACTCAACAAATTCAA+TGG | + | chr3_4:79569524-79569543 | None:intergenic | 30.0% | |
TGTTGAGTTCTTGAACTTAA+TGG | - | chr3_4:79569531-79569550 | Msa0525930:intron | 30.0% | |
CAACGAGTTTCACATAATTA+GGG | + | chr3_4:79569854-79569873 | None:intergenic | 30.0% | |
ACAACGAGTTTCACATAATT+AGG | + | chr3_4:79569855-79569874 | None:intergenic | 30.0% | |
TATGATTATGATAGGCTTCA+TGG | - | chr3_4:79570074-79570093 | Msa0525930:intron | 30.0% | |
ATGCACATTAATTTCACACA+TGG | - | chr3_4:79570527-79570546 | Msa0525930:intron | 30.0% | |
ACACCTTCATAAAAAGTAGT+TGG | - | chr3_4:79570783-79570802 | Msa0525930:CDS | 30.0% | |
!!! | ACACCAACTACTTTTTATGA+AGG | + | chr3_4:79570878-79570897 | None:intergenic | 30.0% |
ATAAAAGACACCTTCACAAA+AGG | - | chr3_4:79570927-79570946 | Msa0525930:intron | 30.0% | |
AGACACGTTATGATCAATTT+AGG | - | chr3_4:79571002-79571021 | Msa0525930:intron | 30.0% | |
GATGATTAAAGAAGCAGATT+TGG | - | chr3_4:79571055-79571074 | Msa0525930:intron | 30.0% | |
ATTAAAGAAGCAGATTTGGA+CGG | - | chr3_4:79571059-79571078 | Msa0525930:intron | 30.0% | |
GGATAGTTTATTTCATCCAA+TGG | + | chr3_4:79571129-79571148 | None:intergenic | 30.0% | |
GGGGAATGAGATTAATTAAT+AGG | + | chr3_4:79571203-79571222 | None:intergenic | 30.0% | |
GTTGAACAAATCAAATGATG+TGG | + | chr3_4:79571337-79571356 | None:intergenic | 30.0% | |
TTGTTTGACAAAGATGGAGA+TGG | - | chr3_4:79569156-79569175 | Msa0525930:exon | 35.0% | |
TGCAACTGTAATTAGGTCAT+TGG | - | chr3_4:79569432-79569451 | Msa0525930:intron | 35.0% | |
CAACCTCGTTTATCATTTCT+TGG | + | chr3_4:79569483-79569502 | None:intergenic | 35.0% | |
!!! | CTATTTTTTCCCCCTCATTT+AGG | - | chr3_4:79569639-79569658 | Msa0525930:intron | 35.0% |
TGCATCAGTTTCCTAAATGA+GGG | + | chr3_4:79569653-79569672 | None:intergenic | 35.0% | |
TTTCTTGAAGCATAGAGCTA+TGG | - | chr3_4:79570379-79570398 | Msa0525930:intron | 35.0% | |
ACACTTCTTCAATCAACTAG+AGG | - | chr3_4:79570577-79570596 | Msa0525930:CDS | 35.0% | |
! | ATTATTCATCGATTGCGGAA+AGG | + | chr3_4:79570616-79570635 | None:intergenic | 35.0% |
CACCTTCATAAAAAGTAGTG+TGG | - | chr3_4:79570784-79570803 | Msa0525930:CDS | 35.0% | |
!!! | CACCACACTACTTTTTATGA+AGG | + | chr3_4:79570789-79570808 | None:intergenic | 35.0% |
! | TTTTATCAAGTCACACCTCA+AGG | - | chr3_4:79570811-79570830 | Msa0525930:CDS | 35.0% |
AAAGTGAAAATCACACCTTG+AGG | + | chr3_4:79570829-79570848 | None:intergenic | 35.0% | |
! | ATAGAAGACACCTTTTGTGA+AGG | + | chr3_4:79570940-79570959 | None:intergenic | 35.0% |
! | GTTAAGATGATGATGACCAT+TGG | - | chr3_4:79571110-79571129 | Msa0525930:intron | 35.0% |
GAGTATAGCTCAATCTTAGC+TGG | + | chr3_4:79568965-79568984 | None:intergenic | 40.0% | |
ATTGGATCAAAACCCAACAG+AGG | - | chr3_4:79569450-79569469 | Msa0525930:intron | 40.0% | |
GCTCCAAGAAATGATAAACG+AGG | - | chr3_4:79569477-79569496 | Msa0525930:intron | 40.0% | |
!! | ATAAACGAGGTTGATGCAGA+TGG | - | chr3_4:79569490-79569509 | Msa0525930:intron | 40.0% |
CATCAGTTTCCTAAATGAGG+GGG | + | chr3_4:79569651-79569670 | None:intergenic | 40.0% | |
GCATCAGTTTCCTAAATGAG+GGG | + | chr3_4:79569652-79569671 | None:intergenic | 40.0% | |
CTGCATCAGTTTCCTAAATG+AGG | + | chr3_4:79569654-79569673 | None:intergenic | 40.0% | |
TGCAGATGAAGATCTCAAAG+AGG | - | chr3_4:79569669-79569688 | Msa0525930:intron | 40.0% | |
AGATCTCAAAGAGGCTTTCA+AGG | - | chr3_4:79569678-79569697 | Msa0525930:intron | 40.0% | |
TGGTTATATTTCCGCTAGTG+AGG | - | chr3_4:79569720-79569739 | Msa0525930:intron | 40.0% | |
TAAACATGCATTAACCGGAG+AGG | + | chr3_4:79569760-79569779 | None:intergenic | 40.0% | |
AAAGCAGAGAGAGAGAGAGA+GGG | + | chr3_4:79569013-79569032 | None:intergenic | 45.0% | |
!! | GAGGTTGATGCAGATGGAAA+TGG | - | chr3_4:79569496-79569515 | Msa0525930:intron | 45.0% |
! | GAGATGTCACTCTAATGGGT+TGG | + | chr3_4:79571312-79571331 | None:intergenic | 45.0% |
GGGTGAGATGTCACTCTAAT+GGG | + | chr3_4:79571316-79571335 | None:intergenic | 45.0% | |
TGGGTGAGATGTCACTCTAA+TGG | + | chr3_4:79571317-79571336 | None:intergenic | 45.0% | |
!!! | TATTTATTTATTTTTAATGA+AGG | + | chr3_4:79570106-79570125 | None:intergenic | 5.0% |
!! | ATAAATACATAATTTAATAT+GGG | + | chr3_4:79570968-79570987 | None:intergenic | 5.0% |
GAAAGCAGAGAGAGAGAGAG+AGG | + | chr3_4:79569014-79569033 | None:intergenic | 50.0% | |
CTTGGAGCTCTTCCTCTGTT+GGG | + | chr3_4:79569465-79569484 | None:intergenic | 50.0% | |
TCTTGGAGCTCTTCCTCTGT+TGG | + | chr3_4:79569466-79569485 | None:intergenic | 50.0% | |
GAAGCAGATTTGGACGGTGA+TGG | - | chr3_4:79571065-79571084 | Msa0525930:intron | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 79568918 | 79571385 | 79568918 | ID=Msa0525930;Name=Msa0525930 |
chr3_4 | mRNA | 79568918 | 79571385 | 79568918 | ID=Msa0525930-mRNA-1;Parent=Msa0525930;Name=Msa0525930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=184|1|1|1|1|1|4|249|150 |
chr3_4 | exon | 79568918 | 79569304 | 79568918 | ID=Msa0525930-mRNA-1:exon:23849;Parent=Msa0525930-mRNA-1 |
chr3_4 | exon | 79570562 | 79570642 | 79570562 | ID=Msa0525930-mRNA-1:exon:23848;Parent=Msa0525930-mRNA-1 |
chr3_4 | exon | 79570736 | 79570893 | 79570736 | ID=Msa0525930-mRNA-1:exon:23847;Parent=Msa0525930-mRNA-1 |
chr3_4 | exon | 79571126 | 79571385 | 79571126 | ID=Msa0525930-mRNA-1:exon:23846;Parent=Msa0525930-mRNA-1 |
chr3_4 | five_prime_UTR | 79571202 | 79571385 | 79571202 | ID=Msa0525930-mRNA-1:five_prime_utr;Parent=Msa0525930-mRNA-1 |
chr3_4 | CDS | 79571126 | 79571201 | 79571126 | ID=Msa0525930-mRNA-1:cds;Parent=Msa0525930-mRNA-1 |
chr3_4 | CDS | 79570736 | 79570893 | 79570736 | ID=Msa0525930-mRNA-1:cds;Parent=Msa0525930-mRNA-1 |
chr3_4 | CDS | 79570562 | 79570642 | 79570562 | ID=Msa0525930-mRNA-1:cds;Parent=Msa0525930-mRNA-1 |
chr3_4 | CDS | 79569167 | 79569304 | 79569167 | ID=Msa0525930-mRNA-1:cds;Parent=Msa0525930-mRNA-1 |
chr3_4 | three_prime_UTR | 79568918 | 79569166 | 79568918 | ID=Msa0525930-mRNA-1:three_prime_utr;Parent=Msa0525930-mRNA-1 |
Gene Sequence |
Protein sequence |