AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179340 MtrunA17_Chr8g0342491 95.848 578 21 1 1 575 1 578 0.0 1147
Msa1179340 MtrunA17_Chr2g0330151 77.217 575 123 4 4 572 3 575 0.0 913
Msa1179340 MtrunA17_Chr1g0178391 54.973 553 240 7 24 572 21 568 0.0 629
Msa1179340 MtrunA17_Chr7g0266641 53.646 576 251 9 1 570 7 572 0.0 617
Msa1179340 MtrunA17_Chr1g0151241 55.347 533 228 5 44 570 42 570 0.0 600
Msa1179340 MtrunA17_Chr1g0151301 53.846 533 236 5 44 570 16 544 0.0 582
Msa1179340 MtrunA17_Chr1g0151321 50.278 539 253 9 42 570 14 547 0.0 531
Msa1179340 MtrunA17_Chr5g0427521 65.915 355 113 5 62 408 11 365 2.05e-169 486
Msa1179340 MtrunA17_Chr4g0056501 47.925 530 259 9 48 569 112 632 9.42e-161 473
Msa1179340 MtrunA17_Chr3g0079291 46.212 528 268 10 48 569 104 621 7.84e-158 465
Msa1179340 MtrunA17_Chr5g0427511 65.143 175 58 3 401 572 16 190 4.05e-74 234
Msa1179340 MtrunA17_Chr1g0151281 57.360 197 80 2 74 268 76 270 2.11e-73 235
Msa1179340 MtrunA17_Chr1g0151271 47.317 205 107 1 367 570 1 205 2.97e-56 188
Msa1179340 MtrunA17_Chr1g0151251 39.474 76 43 2 276 351 34 106 1.88e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179340 AT3G13790.2 65.836 562 179 8 19 570 21 579 0.0 745
Msa1179340 AT3G13790.1 65.487 565 179 9 19 570 21 582 0.0 739
Msa1179340 AT3G13790.5 66.862 513 159 6 66 570 3 512 0.0 690
Msa1179340 AT3G13790.4 66.862 513 159 6 66 570 3 512 0.0 690
Msa1179340 AT3G13790.3 66.862 513 159 6 66 570 3 512 0.0 690
Msa1179340 AT1G55120.1 57.877 584 220 8 5 575 7 577 0.0 674
Msa1179340 AT3G13784.1 56.719 573 225 10 6 569 10 568 0.0 655
Msa1179340 AT3G13784.4 56.424 576 225 11 6 569 10 571 0.0 649
Msa1179340 AT3G13784.2 56.424 576 225 11 6 569 10 571 0.0 649
Msa1179340 AT1G55120.3 58.425 546 215 6 40 575 19 562 0.0 645
Msa1179340 AT1G55120.4 60.381 525 196 6 61 575 15 537 0.0 645
Msa1179340 AT1G55120.2 60.305 524 196 6 62 575 17 538 0.0 643
Msa1179340 AT3G13784.3 58.687 518 200 8 61 569 6 518 0.0 619
Msa1179340 AT3G52600.1 52.659 583 251 11 4 568 6 581 0.0 594
Msa1179340 AT2G36190.1 51.957 562 247 9 24 568 27 582 0.0 574
Msa1179340 AT3G52600.3 54.023 522 222 8 61 568 10 527 0.0 559
Msa1179340 AT3G52600.2 53.950 519 221 8 64 568 1 515 0.0 554
Msa1179340 AT5G11920.1 48.972 535 257 9 48 572 17 545 4.78e-176 509
Msa1179340 AT5G11920.3 48.837 516 251 8 64 572 1 510 9.02e-168 487
Msa1179340 AT1G62660.1 46.328 531 272 8 48 569 106 632 7.68e-157 464
Msa1179340 AT1G12240.1 43.796 548 294 8 32 569 105 648 2.99e-156 463
Msa1179340 AT1G62660.2 45.825 515 269 7 61 569 24 534 1.32e-150 444
Msa1179340 AT5G11920.2 51.467 375 167 8 48 413 17 385 3.61e-127 380
Msa1179340 AT1G62660.4 43.830 470 254 7 106 569 1 466 2.18e-126 380
Msa1179340 AT1G62660.3 43.830 470 254 7 106 569 1 466 2.18e-126 380

Find 123 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCTCCTTTGAGTATTT+TGG 0.149574 8_1:+12699982 None:intergenic
TCACTAGTTGGTTCCATTAA+TGG 0.178086 8_1:+12700924 None:intergenic
GATAATGATTTGACCACTTA+TGG 0.185101 8_1:-12699199 Msa1179340:CDS
CTACTTTATGCTTTCAATAA+TGG 0.186801 8_1:-12698738 Msa1179340:CDS
AAATTAATGCAAGTTCATTT+AGG 0.188719 8_1:-12700896 Msa1179340:CDS
ACATATTTGATTTGATAAAA+AGG 0.212427 8_1:-12698510 Msa1179340:three_prime_UTR
GACAAATTTGTCCCTGATAA+AGG 0.213270 8_1:-12700561 Msa1179340:CDS
TGCTCCTCAAACCCTTTATC+AGG 0.221497 8_1:+12700549 None:intergenic
AGACAATTCCAAGGACTATT+TGG 0.251891 8_1:-12700087 Msa1179340:CDS
TTACCATTTATCCAATTCTT+TGG 0.254575 8_1:+12702142 None:intergenic
CCTCCAAAGAATTGGATAAA+TGG 0.258703 8_1:-12702145 Msa1179340:intron
TATTAGAGAGGCTGAAGTTT+TGG 0.273028 8_1:-12699565 Msa1179340:CDS
AATTAATGCAAGTTCATTTA+GGG 0.289026 8_1:-12700895 Msa1179340:CDS
CAATCCTAAAGGTGCAGTTT+GGG 0.290163 8_1:-12701198 Msa1179340:CDS
TTTCAACTGATCTTGTTAAC+TGG 0.295469 8_1:-12701151 Msa1179340:CDS
AAAAGTGGATTGGGACCTTT+TGG 0.301193 8_1:-12699492 Msa1179340:CDS
CACTCTGTGGTAGAGAGTTT+TGG 0.308876 8_1:-12698825 Msa1179340:CDS
GGTGAATTGTTGCCAATTAA+TGG 0.309135 8_1:-12699965 Msa1179340:CDS
GGAAATTGGAGGATAATTAT+TGG 0.312645 8_1:-12700843 Msa1179340:CDS
TTTCCCCAAACTGCACCTTT+AGG 0.314409 8_1:+12701194 None:intergenic
GCTGGTGTGACACCATTAAT+TGG 0.331992 8_1:+12699953 None:intergenic
ACAATCCTAAAGGTGCAGTT+TGG 0.332961 8_1:-12701199 Msa1179340:CDS
GCATGTGTTGAAGGTTAGTT+TGG 0.341518 8_1:-12700634 Msa1179340:CDS
TCTCAACCGTCCGATATAAA+TGG 0.343321 8_1:-12701101 Msa1179340:CDS
AGAAAGTAGGAGTGGAATAC+TGG 0.343758 8_1:-12698643 Msa1179340:three_prime_UTR
ATTTCCAACCTCCAAAGAAT+TGG 0.344409 8_1:-12702153 Msa1179340:CDS
AAACATGATTATTATCTCAT+TGG 0.352794 8_1:-12700603 Msa1179340:CDS
TTTACTTTCATTTATATCAA+TGG 0.372171 8_1:-12702271 Msa1179340:CDS
ACAAATTTGTCCCTGATAAA+GGG 0.372247 8_1:-12700560 Msa1179340:CDS
ATAATGATTTGACCACTTAT+GGG 0.372960 8_1:-12699198 Msa1179340:CDS
TCATTTAGGGATCCAACAAC+TGG 0.379967 8_1:-12700882 Msa1179340:CDS
GGTTAGGAAAAGATGGAAAT+TGG 0.385170 8_1:-12700857 Msa1179340:CDS
CAGTTTGGGGAAATATTGTA+TGG 0.385408 8_1:-12701184 Msa1179340:CDS
GAAGCTGTCATTGAGAAGTT+TGG 0.388748 8_1:-12699146 Msa1179340:intron
TTTCCTAACCACCCAGTTGT+TGG 0.392078 8_1:+12700870 None:intergenic
GATATAAATGGTTGTTGGTC+AGG 0.395891 8_1:-12701089 Msa1179340:CDS
TTAATCCATTCCCTTAGAAA+AGG 0.402619 8_1:+12700960 None:intergenic
AACTTCTCAACTTCCACAAC+TGG 0.405864 8_1:+12700031 None:intergenic
AACATGATTATTATCTCATT+GGG 0.406129 8_1:-12700602 Msa1179340:CDS
AAGTAGTGCCTTATCATTGA+TGG 0.406784 8_1:+12698755 None:intergenic
CACCCTTTGCATTCAGCTAA+AGG 0.411767 8_1:-12700747 Msa1179340:CDS
TTTGAACTTGGTGATTCATT+GGG 0.421380 8_1:+12701012 None:intergenic
CTGCACCTTTAGGATTGTAT+TGG 0.421473 8_1:+12701204 None:intergenic
GATCCAACAACTGGGTGGTT+AGG 0.424775 8_1:-12700873 Msa1179340:CDS
AATGTACCAATTCTCAAAAC+AGG 0.431232 8_1:+12700693 None:intergenic
TCAAATTCTGTGTAGCCAAA+AGG 0.442985 8_1:-12699526 Msa1179340:CDS
GGAAAGATGGCTGGATCTAG+TGG 0.445642 8_1:+12701125 None:intergenic
AGATCACAAGATTGAGTGCT+TGG 0.446805 8_1:-12698701 Msa1179340:CDS
ACTATTTGGTTACACAAGTC+AGG 0.447214 8_1:-12700073 Msa1179340:CDS
CACATCAATGAAAAGTGGAT+TGG 0.448305 8_1:-12699502 Msa1179340:CDS
CATTAAATAGTGATGATGTT+AGG 0.449223 8_1:-12700656 Msa1179340:CDS
AAAATATAGCTTACTTGGGC+TGG 0.449929 8_1:+12699935 None:intergenic
GGGCAAAGACAAACCTGCTT+TGG 0.450733 8_1:+12699370 None:intergenic
ACATGGTGAGTAGCTTCAAT+AGG 0.450751 8_1:+12702241 None:intergenic
TCAAAATTACAAAGAACAAA+TGG 0.454449 8_1:+12698442 None:intergenic
GATATCAAGAAAGGATGGTC+TGG 0.457851 8_1:-12700402 Msa1179340:CDS
TGTCCCTGATAAAGGGTTTG+AGG 0.458197 8_1:-12700553 Msa1179340:CDS
TGACCAACAACCATTTATAT+CGG 0.463205 8_1:+12701091 None:intergenic
GGATCAGCCACAATTCTTCA+TGG 0.466652 8_1:-12701068 Msa1179340:CDS
ATTCCAGTGTATAAAATAGC+TGG 0.469730 8_1:+12701038 None:intergenic
CCATTTATCCAATTCTTTGG+AGG 0.469796 8_1:+12702145 None:intergenic
TTATCCAATTCTTTGGAGGT+TGG 0.470239 8_1:+12702149 None:intergenic
ACATCAATGAAAAGTGGATT+GGG 0.472461 8_1:-12699501 Msa1179340:CDS
CAAATTCTGTGTAGCCAAAA+GGG 0.475246 8_1:-12699525 Msa1179340:CDS
TAAGAGTAAATCCTGTCAAA+TGG 0.478316 8_1:-12700009 Msa1179340:CDS
ATGGAAAATTATAAGAAAGT+AGG 0.480965 8_1:-12698656 Msa1179340:exon
TTGCATTCAGCTAAAGGCAC+TGG 0.481511 8_1:-12700741 Msa1179340:CDS
CAGCTAAAGGCACTGGAATG+TGG 0.487107 8_1:-12700734 Msa1179340:CDS
TAATCCATTCCCTTAGAAAA+GGG 0.488502 8_1:+12700961 None:intergenic
TACATTGGCCATCAATGATA+AGG 0.488874 8_1:-12698763 Msa1179340:CDS
ATGAAGAAAGCACAATCAAA+TGG 0.494527 8_1:-12698675 Msa1179340:CDS
AAATGATAAGCAGTTCTGTA+AGG 0.500173 8_1:+12702172 None:intergenic
AGTTCTGTAAGGTTGTTTGA+AGG 0.502878 8_1:+12702183 None:intergenic
TAAAGTCCTTTGTAACTCAA+TGG 0.506003 8_1:+12701239 None:intergenic
TGATGTTAGGCATGTGTTGA+AGG 0.506176 8_1:-12700643 Msa1179340:CDS
TTTGGCTACACAGAATTTGA+GGG 0.509991 8_1:+12699529 None:intergenic
TTGATGATGGGAAGAAGAGA+AGG 0.514874 8_1:-12700467 Msa1179340:CDS
TGCCTTTAGCTGAATGCAAA+GGG 0.522860 8_1:+12700745 None:intergenic
TTCTACCAATACAATCCTAA+AGG 0.523930 8_1:-12701209 Msa1179340:CDS
TTGTGTAACCAAATAGTCCT+TGG 0.524635 8_1:+12700079 None:intergenic
GGTTGAGATGGAAAGATGGC+TGG 0.526843 8_1:+12701116 None:intergenic
CGTCCGATATAAATGGTTGT+TGG 0.529048 8_1:-12701094 Msa1179340:CDS
ATCCAGAGTTTATCCTACAT+TGG 0.530791 8_1:-12698778 Msa1179340:CDS
GTCTATAAAAGTCCCATAAG+TGG 0.532511 8_1:+12699186 None:intergenic
ACTGGGTGGTTAGGAAAAGA+TGG 0.536301 8_1:-12700864 Msa1179340:CDS
GTTGATACAGTGGCCAGTTG+TGG 0.539361 8_1:-12700044 Msa1179340:CDS
AGCTAAAGGCACTGGAATGT+GGG 0.543615 8_1:-12700733 Msa1179340:CDS
TTTATATCGGACGGTTGAGA+TGG 0.547063 8_1:+12701104 None:intergenic
CAATCTTGTGATCTTGACAT+TGG 0.547958 8_1:+12698710 None:intergenic
AAGGGCACATCAATGAAAAG+TGG 0.553430 8_1:-12699507 Msa1179340:CDS
TGGTAGCAAAAGAAACACTA+GGG 0.560168 8_1:-12700823 Msa1179340:CDS
GCTCCTCAAACCCTTTATCA+GGG 0.563372 8_1:+12700550 None:intergenic
GTGCCTTTAGCTGAATGCAA+AGG 0.565473 8_1:+12700744 None:intergenic
CAACAACCATTTATATCGGA+CGG 0.569338 8_1:+12701095 None:intergenic
TTGGTAGCAAAAGAAACACT+AGG 0.573322 8_1:-12700824 Msa1179340:CDS
GGACGGTTGAGATGGAAAGA+TGG 0.576030 8_1:+12701112 None:intergenic
GAAAGATGGCTGGATCTAGT+GGG 0.576401 8_1:+12701126 None:intergenic
TTATCATTGATGGCCAATGT+AGG 0.579853 8_1:+12698765 None:intergenic
GTTGCTGATGATATCAAGAA+AGG 0.586411 8_1:-12700411 Msa1179340:CDS
CTGATGATATCAAGAAAGGA+TGG 0.598135 8_1:-12700407 Msa1179340:CDS
CATCAGAAGATAAACTCTGA+AGG 0.599752 8_1:+12702209 None:intergenic
TAGGAAAAGATGGAAATTGG+AGG 0.601299 8_1:-12700854 Msa1179340:CDS
TGAAGTGAATAATATTAGAG+AGG 0.608534 8_1:-12699577 Msa1179340:CDS
ATAGGACCATTGAGTTACAA+AGG 0.609277 8_1:-12701245 Msa1179340:intron
GGCCAATGTAGGATAAACTC+TGG 0.612364 8_1:+12698776 None:intergenic
AAATTATAAGAAAGTAGGAG+TGG 0.613664 8_1:-12698651 Msa1179340:exon
TGACTATATTCTCTACTATG+TGG 0.616850 8_1:-12702306 Msa1179340:CDS
TGTATATGCAGACAATTCCA+AGG 0.624497 8_1:-12700096 Msa1179340:intron
TTGGCTACACAGAATTTGAG+GGG 0.624742 8_1:+12699530 None:intergenic
TGGCCCACCAAAATACTCAA+AGG 0.632566 8_1:-12699989 Msa1179340:CDS
TCTGAAGGTTTCTATAAACA+TGG 0.633706 8_1:+12702224 None:intergenic
ATATAAATGAAAGTAAAGAG+AGG 0.639179 8_1:+12702277 None:intergenic
GATATCATCAGCAACACTTG+AGG 0.639793 8_1:+12700419 None:intergenic
AATCCTAAAGGTGCAGTTTG+GGG 0.643615 8_1:-12701197 Msa1179340:CDS
CATTTAGGGATCCAACAACT+GGG 0.646395 8_1:-12700881 Msa1179340:CDS
AGTTTGGGGAAATATTGTAT+GGG 0.646588 8_1:-12701183 Msa1179340:CDS
TTTGTTACCATGAAGAATTG+TGG 0.654746 8_1:+12701061 None:intergenic
TTCACAGATTGATCACTCTG+TGG 0.662489 8_1:-12698838 Msa1179340:intron
CAGGAAAACAGTTGATACAG+TGG 0.677166 8_1:-12700054 Msa1179340:CDS
CCCACCAAAATACTCAAAGG+AGG 0.687045 8_1:-12699986 Msa1179340:CDS
AAAGATGGCTGGATCTAGTG+GGG 0.700863 8_1:+12701127 None:intergenic
TTAGGGATCCAACAACTGGG+TGG 0.706173 8_1:-12700878 Msa1179340:CDS
GGTAGCAAAAGAAACACTAG+GGG 0.722203 8_1:-12700822 Msa1179340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTCAAAAAAAGAAATA+GGG + chr8_1:12698656-12698675 None:intergenic 10.0%
!! AATATTTCAAAAAAAGAAAT+AGG + chr8_1:12698657-12698676 None:intergenic 10.0%
!! TTCAAAAGTAATATAATAAA+CGG - chr8_1:12699078-12699097 Msa1179340:intron 10.0%
!! TTTACTTTCATTTATATCAA+TGG - chr8_1:12698469-12698488 Msa1179340:three_prime_UTR 15.0%
!! GAAAAATTAATATAGTATAG+AGG - chr8_1:12699124-12699143 Msa1179340:intron 15.0%
!!! TGATTGTTTTTCTTATATAT+TGG + chr8_1:12699169-12699188 None:intergenic 15.0%
!! CAAAAAAATTAAAAAGAAAG+TGG - chr8_1:12699344-12699363 Msa1179340:intron 15.0%
!!! TCATTATATTCATATTTTAC+TGG + chr8_1:12699371-12699390 None:intergenic 15.0%
!! ATGAATATAATGATAGTTTA+AGG - chr8_1:12699378-12699397 Msa1179340:intron 15.0%
!!! TTAATTTTATTTTCACTAGT+TGG + chr8_1:12699831-12699850 None:intergenic 15.0%
!!! AGAGTAAAGATTTTATTAAT+TGG - chr8_1:12699958-12699977 Msa1179340:CDS 15.0%
!! AACTAATAACAAAAATATCA+AGG + chr8_1:12700392-12700411 None:intergenic 15.0%
!! AAAAAAAATATAGCTTACTT+GGG + chr8_1:12700812-12700831 None:intergenic 15.0%
!! AAAAAAAAATATAGCTTACT+TGG + chr8_1:12700813-12700832 None:intergenic 15.0%
!!! CTTTTAATTTGAATCATTAT+TGG + chr8_1:12701038-12701057 None:intergenic 15.0%
!! ATTAAAAGAGTAAATTTACA+AGG - chr8_1:12701050-12701069 Msa1179340:CDS 15.0%
!!! ATTAATCAATTATTTTATGC+AGG - chr8_1:12701121-12701140 Msa1179340:CDS 15.0%
!!! ACATATTTGATTTGATAAAA+AGG - chr8_1:12702230-12702249 Msa1179340:CDS 15.0%
!! ATATAAATGAAAGTAAAGAG+AGG + chr8_1:12698466-12698485 None:intergenic 20.0%
!!! TTTTCTTGTTATGATTTCTT+TGG + chr8_1:12699109-12699128 None:intergenic 20.0%
!! CTATTTAACTAATTAGTTGT+AGG - chr8_1:12699193-12699212 Msa1179340:CDS 20.0%
!!! TTATATATGTGACTTTTGAT+AGG - chr8_1:12699477-12699496 Msa1179340:CDS 20.0%
!! AAATTAATGCAAGTTCATTT+AGG - chr8_1:12699844-12699863 Msa1179340:intron 20.0%
!! AATTAATGCAAGTTCATTTA+GGG - chr8_1:12699845-12699864 Msa1179340:intron 20.0%
!! AAACATGATTATTATCTCAT+TGG - chr8_1:12700137-12700156 Msa1179340:intron 20.0%
!! AACATGATTATTATCTCATT+GGG - chr8_1:12700138-12700157 Msa1179340:intron 20.0%
!!! CAAATTTTGAGATATGATTA+TGG - chr8_1:12700224-12700243 Msa1179340:intron 20.0%
!! TGTGACTAATAAGATATATT+TGG - chr8_1:12700954-12700973 Msa1179340:CDS 20.0%
!!! TTAATTTGAATCATTATTGG+AGG + chr8_1:12701035-12701054 None:intergenic 20.0%
!! CAAATACCAACAAAAAAATT+TGG - chr8_1:12701331-12701350 Msa1179340:intron 20.0%
!! AAAATGCATCTTTAATTAAC+AGG - chr8_1:12701503-12701522 Msa1179340:intron 20.0%
!! TACAATCCATAAAAAAAAGT+TGG + chr8_1:12701671-12701690 None:intergenic 20.0%
!!! TTGTTTATATTTAAGACTAG+AGG - chr8_1:12701793-12701812 Msa1179340:intron 20.0%
!!! CATTCATTATATTTTCCATT+TGG - chr8_1:12701852-12701871 Msa1179340:intron 20.0%
!! TAATTTATTAGAACTCCAAA+TGG + chr8_1:12701870-12701889 None:intergenic 20.0%
!! ATGGAAAATTATAAGAAAGT+AGG - chr8_1:12702084-12702103 Msa1179340:intron 20.0%
!! TCAAAATTACAAAGAACAAA+TGG + chr8_1:12702301-12702320 None:intergenic 20.0%
! TTACCATTTATCCAATTCTT+TGG + chr8_1:12698601-12698620 None:intergenic 25.0%
! TCAAATATAATCATGTGTGT+CGG + chr8_1:12698917-12698936 None:intergenic 25.0%
! TAATAGTTAGATATGACCTA+TGG + chr8_1:12698980-12698999 None:intergenic 25.0%
! GAATTTAGTCAAAACTCAAA+AGG - chr8_1:12699047-12699066 Msa1179340:intron 25.0%
! AACTAATTAGTTGTAGGTAT+AGG - chr8_1:12699199-12699218 Msa1179340:CDS 25.0%
! AAATCACTTACTTGATCAAT+TGG - chr8_1:12699229-12699248 Msa1179340:intron 25.0%
! AAAAACTGTCATTCAAAGAA+TGG - chr8_1:12699295-12699314 Msa1179340:intron 25.0%
!!! CTTTTCATGTCATTGTTTTT+TGG - chr8_1:12699424-12699443 Msa1179340:CDS 25.0%
!! AAAGGGTCAGATAAATTTTT+GGG + chr8_1:12699765-12699784 None:intergenic 25.0%
!! AAAAGGGTCAGATAAATTTT+TGG + chr8_1:12699766-12699785 None:intergenic 25.0%
!!! TTTTTTCCTGTTTTGAGAAT+TGG - chr8_1:12700041-12700060 Msa1179340:CDS 25.0%
!! CATTAAATAGTGATGATGTT+AGG - chr8_1:12700084-12700103 Msa1179340:CDS 25.0%
! TCAAAAACTTTCTTTGATGA+TGG - chr8_1:12700260-12700279 Msa1179340:intron 25.0%
!! CAAAAACTTTCTTTGATGAT+GGG - chr8_1:12700261-12700280 Msa1179340:intron 25.0%
!!! TCTACCTTAGTTTATTTTCT+AGG - chr8_1:12700466-12700485 Msa1179340:CDS 25.0%
!!! CTACCTTAGTTTATTTTCTA+GGG - chr8_1:12700467-12700486 Msa1179340:CDS 25.0%
! TTAGTTTATGCTAAATAGTC+AGG - chr8_1:12700586-12700605 Msa1179340:CDS 25.0%
! TAGTTTATGCTAAATAGTCA+GGG - chr8_1:12700587-12700606 Msa1179340:CDS 25.0%
! TGAAGTGAATAATATTAGAG+AGG - chr8_1:12701163-12701182 Msa1179340:CDS 25.0%
! ATCTTATGCAAATAACTAGA+GGG + chr8_1:12701393-12701412 None:intergenic 25.0%
! AATCTTATGCAAATAACTAG+AGG + chr8_1:12701394-12701413 None:intergenic 25.0%
!! GCATTTTTATAAGATAGAGT+TGG + chr8_1:12701490-12701509 None:intergenic 25.0%
! ATAATGATTTGACCACTTAT+GGG - chr8_1:12701542-12701561 Msa1179340:intron 25.0%
! TCTAATTGATTGAGCATTTA+AGG - chr8_1:12701622-12701641 Msa1179340:intron 25.0%
!!! TTTTTTTATGGATTGTAGTG+TGG - chr8_1:12701674-12701693 Msa1179340:intron 25.0%
!! TTCATAAATTGCAACTTTTG+TGG + chr8_1:12701701-12701720 None:intergenic 25.0%
! GGAAATATATCATCAATAAG+AGG - chr8_1:12701814-12701833 Msa1179340:intron 25.0%
! CTACTTTATGCTTTCAATAA+TGG - chr8_1:12702002-12702021 Msa1179340:intron 25.0%
! AAATTATAAGAAAGTAGGAG+TGG - chr8_1:12702089-12702108 Msa1179340:intron 25.0%
!!! TTTGATTTGATAAAAAGGTG+AGG - chr8_1:12702235-12702254 Msa1179340:CDS 25.0%
TGACTATATTCTCTACTATG+TGG - chr8_1:12698434-12698453 Msa1179340:three_prime_UTR 30.0%
TCTGAAGGTTTCTATAAACA+TGG + chr8_1:12698519-12698538 None:intergenic 30.0%
AAATGATAAGCAGTTCTGTA+AGG + chr8_1:12698571-12698590 None:intergenic 30.0%
TTTGACATGTTATGCTCAAA+TGG - chr8_1:12698725-12698744 Msa1179340:CDS 30.0%
AGAGAAATGAACTAACCATT+AGG + chr8_1:12698784-12698803 None:intergenic 30.0%
! AGATGATGATGATGATACAA+TGG + chr8_1:12698869-12698888 None:intergenic 30.0%
TAAAGTCCTTTGTAACTCAA+TGG + chr8_1:12699504-12699523 None:intergenic 30.0%
TTCTACCAATACAATCCTAA+AGG - chr8_1:12699531-12699550 Msa1179340:CDS 30.0%
AGTTTGGGGAAATATTGTAT+GGG - chr8_1:12699557-12699576 Msa1179340:CDS 30.0%
TTTCAACTGATCTTGTTAAC+TGG - chr8_1:12699589-12699608 Msa1179340:CDS 30.0%
TGACCAACAACCATTTATAT+CGG + chr8_1:12699652-12699671 None:intergenic 30.0%
TTTGTTACCATGAAGAATTG+TGG + chr8_1:12699682-12699701 None:intergenic 30.0%
!! AAACCAGCTATTTTATACAC+TGG - chr8_1:12699699-12699718 Msa1179340:intron 30.0%
ATTCCAGTGTATAAAATAGC+TGG + chr8_1:12699705-12699724 None:intergenic 30.0%
! TTTGAACTTGGTGATTCATT+GGG + chr8_1:12699731-12699750 None:intergenic 30.0%
!! TTTTGAACTTGGTGATTCAT+TGG + chr8_1:12699732-12699751 None:intergenic 30.0%
!! GGTATGCTATATTTTGAACT+TGG + chr8_1:12699743-12699762 None:intergenic 30.0%
! AAGGGTCAGATAAATTTTTG+GGG + chr8_1:12699764-12699783 None:intergenic 30.0%
! ATTTATCTGACCCTTTTCTA+AGG - chr8_1:12699769-12699788 Msa1179340:intron 30.0%
! TTTATCTGACCCTTTTCTAA+GGG - chr8_1:12699770-12699789 Msa1179340:intron 30.0%
TAATCCATTCCCTTAGAAAA+GGG + chr8_1:12699782-12699801 None:intergenic 30.0%
TTAATCCATTCCCTTAGAAA+AGG + chr8_1:12699783-12699802 None:intergenic 30.0%
GTCACCAAAAAATCCATTAA+TGG - chr8_1:12699803-12699822 Msa1179340:intron 30.0%
!!! GGTTCCATTAATGGATTTTT+TGG + chr8_1:12699810-12699829 None:intergenic 30.0%
GGAAATTGGAGGATAATTAT+TGG - chr8_1:12699897-12699916 Msa1179340:intron 30.0%
CTCAAAACAGGAAAAAAATC+AGG + chr8_1:12700038-12700057 None:intergenic 30.0%
AATGTACCAATTCTCAAAAC+AGG + chr8_1:12700050-12700069 None:intergenic 30.0%
!!! GTTTTGAGAATTGGTACATT+TGG - chr8_1:12700050-12700069 Msa1179340:CDS 30.0%
ACAAATTTGTCCCTGATAAA+GGG - chr8_1:12700180-12700199 Msa1179340:intron 30.0%
ATGCCCTAGAAAATAAACTA+AGG + chr8_1:12700473-12700492 None:intergenic 30.0%
!!! TTAGTTTATTTTCTAGGGCA+TGG - chr8_1:12700472-12700491 Msa1179340:CDS 30.0%
AAACTACTTCAAGTCAACTT+TGG + chr8_1:12700568-12700587 None:intergenic 30.0%
TAAGAGTAAATCCTGTCAAA+TGG - chr8_1:12700731-12700750 Msa1179340:CDS 30.0%
! ACATCAATGAAAAGTGGATT+GGG - chr8_1:12701239-12701258 Msa1179340:CDS 30.0%
!!! AGAGCACCAAATTTTTTTGT+TGG + chr8_1:12701340-12701359 None:intergenic 30.0%
GATAATGATTTGACCACTTA+TGG - chr8_1:12701541-12701560 Msa1179340:intron 30.0%
! ATGAAGAAAGCACAATCAAA+TGG - chr8_1:12702065-12702084 Msa1179340:intron 30.0%
CATCAGAAGATAAACTCTGA+AGG + chr8_1:12698534-12698553 None:intergenic 35.0%
AGTTCTGTAAGGTTGTTTGA+AGG + chr8_1:12698560-12698579 None:intergenic 35.0%
ATTTCCAACCTCCAAAGAAT+TGG - chr8_1:12698587-12698606 Msa1179340:three_prime_UTR 35.0%
! TTATCCAATTCTTTGGAGGT+TGG + chr8_1:12698594-12698613 None:intergenic 35.0%
CCATTTATCCAATTCTTTGG+AGG + chr8_1:12698598-12698617 None:intergenic 35.0%
CCTCCAAAGAATTGGATAAA+TGG - chr8_1:12698595-12698614 Msa1179340:three_prime_UTR 35.0%
GTTATGCTCAAATGGATATG+TGG - chr8_1:12698733-12698752 Msa1179340:CDS 35.0%
ATATGTGGATGCGTATTATG+TGG - chr8_1:12698748-12698767 Msa1179340:CDS 35.0%
ACATTTGTGTTATGCTCCAT+AGG - chr8_1:12698961-12698980 Msa1179340:intron 35.0%
TCAAAACTCAAAAGGCTGAA+AGG - chr8_1:12699055-12699074 Msa1179340:intron 35.0%
ATAGGACCATTGAGTTACAA+AGG - chr8_1:12699495-12699514 Msa1179340:CDS 35.0%
CAGTTTGGGGAAATATTGTA+TGG - chr8_1:12699556-12699575 Msa1179340:CDS 35.0%
CAACAACCATTTATATCGGA+CGG + chr8_1:12699648-12699667 None:intergenic 35.0%
GATATAAATGGTTGTTGGTC+AGG - chr8_1:12699651-12699670 Msa1179340:intron 35.0%
! TCACTAGTTGGTTCCATTAA+TGG + chr8_1:12699819-12699838 None:intergenic 35.0%
GGTTAGGAAAAGATGGAAAT+TGG - chr8_1:12699883-12699902 Msa1179340:intron 35.0%
TAGGAAAAGATGGAAATTGG+AGG - chr8_1:12699886-12699905 Msa1179340:intron 35.0%
! TTGGTAGCAAAAGAAACACT+AGG - chr8_1:12699916-12699935 Msa1179340:intron 35.0%
TGGTAGCAAAAGAAACACTA+GGG - chr8_1:12699917-12699936 Msa1179340:intron 35.0%
GACAAATTTGTCCCTGATAA+AGG - chr8_1:12700179-12700198 Msa1179340:intron 35.0%
! AAGAAGAGAAGGATTTTGCT+TGG - chr8_1:12700284-12700303 Msa1179340:intron 35.0%
GTTGCTGATGATATCAAGAA+AGG - chr8_1:12700329-12700348 Msa1179340:intron 35.0%
CTGATGATATCAAGAAAGGA+TGG - chr8_1:12700333-12700352 Msa1179340:intron 35.0%
TGTATATGCAGACAATTCCA+AGG - chr8_1:12700644-12700663 Msa1179340:CDS 35.0%
AGACAATTCCAAGGACTATT+TGG - chr8_1:12700653-12700672 Msa1179340:CDS 35.0%
TTGTGTAACCAAATAGTCCT+TGG + chr8_1:12700664-12700683 None:intergenic 35.0%
ACTATTTGGTTACACAAGTC+AGG - chr8_1:12700667-12700686 Msa1179340:CDS 35.0%
! TTCACCTCCTTTGAGTATTT+TGG + chr8_1:12700761-12700780 None:intergenic 35.0%
GGTGAATTGTTGCCAATTAA+TGG - chr8_1:12700775-12700794 Msa1179340:CDS 35.0%
AAAATATAGCTTACTTGGGC+TGG + chr8_1:12700808-12700827 None:intergenic 35.0%
CATTGTAAGACTTAGAGATG+TGG + chr8_1:12700913-12700932 None:intergenic 35.0%
! TATTAGAGAGGCTGAAGTTT+TGG - chr8_1:12701175-12701194 Msa1179340:CDS 35.0%
TTTGGCTACACAGAATTTGA+GGG + chr8_1:12701214-12701233 None:intergenic 35.0%
!! TTTTGGCTACACAGAATTTG+AGG + chr8_1:12701215-12701234 None:intergenic 35.0%
TCAAATTCTGTGTAGCCAAA+AGG - chr8_1:12701214-12701233 Msa1179340:CDS 35.0%
CAAATTCTGTGTAGCCAAAA+GGG - chr8_1:12701215-12701234 Msa1179340:CDS 35.0%
! TTTTCATTGATGTGCCCTTT+TGG + chr8_1:12701232-12701251 None:intergenic 35.0%
CACATCAATGAAAAGTGGAT+TGG - chr8_1:12701238-12701257 Msa1179340:CDS 35.0%
!!! CTGCTAGTTTTTGCTTCAAA+GGG - chr8_1:12701272-12701291 Msa1179340:intron 35.0%
!!! TGCTAGTTTTTGCTTCAAAG+GGG - chr8_1:12701273-12701292 Msa1179340:intron 35.0%
GTCTATAAAAGTCCCATAAG+TGG + chr8_1:12701557-12701576 None:intergenic 35.0%
! TTATGGGACTTTTATAGACG+TGG - chr8_1:12701558-12701577 Msa1179340:intron 35.0%
!!! GATGCGCCAACTTTTTTTTA+TGG - chr8_1:12701662-12701681 Msa1179340:intron 35.0%
CTATGCATAATGCATGTGTT+AGG + chr8_1:12701767-12701786 None:intergenic 35.0%
GAGTGATCAATCTGTGAAAA+AGG + chr8_1:12701900-12701919 None:intergenic 35.0%
ATCCAGAGTTTATCCTACAT+TGG - chr8_1:12701962-12701981 Msa1179340:intron 35.0%
! TTATCATTGATGGCCAATGT+AGG + chr8_1:12701978-12701997 None:intergenic 35.0%
TACATTGGCCATCAATGATA+AGG - chr8_1:12701977-12701996 Msa1179340:intron 35.0%
AAGTAGTGCCTTATCATTGA+TGG + chr8_1:12701988-12702007 None:intergenic 35.0%
CAATCTTGTGATCTTGACAT+TGG + chr8_1:12702033-12702052 None:intergenic 35.0%
ACATGGTGAGTAGCTTCAAT+AGG + chr8_1:12698502-12698521 None:intergenic 40.0%
TGTGGATTTGCAGATCCTAA+TGG - chr8_1:12698766-12698785 Msa1179340:CDS 40.0%
!! CTGCACCTTTAGGATTGTAT+TGG + chr8_1:12699539-12699558 None:intergenic 40.0%
! ACAATCCTAAAGGTGCAGTT+TGG - chr8_1:12699541-12699560 Msa1179340:CDS 40.0%
! CAATCCTAAAGGTGCAGTTT+GGG - chr8_1:12699542-12699561 Msa1179340:CDS 40.0%
! AATCCTAAAGGTGCAGTTTG+GGG - chr8_1:12699543-12699562 Msa1179340:CDS 40.0%
TTTATATCGGACGGTTGAGA+TGG + chr8_1:12699639-12699658 None:intergenic 40.0%
TCTCAACCGTCCGATATAAA+TGG - chr8_1:12699639-12699658 Msa1179340:intron 40.0%
CGTCCGATATAAATGGTTGT+TGG - chr8_1:12699646-12699665 Msa1179340:intron 40.0%
TCATTTAGGGATCCAACAAC+TGG - chr8_1:12699858-12699877 Msa1179340:intron 40.0%
CATTTAGGGATCCAACAACT+GGG - chr8_1:12699859-12699878 Msa1179340:intron 40.0%
GGTAGCAAAAGAAACACTAG+GGG - chr8_1:12699918-12699937 Msa1179340:intron 40.0%
TGCCTTTAGCTGAATGCAAA+GGG + chr8_1:12699998-12700017 None:intergenic 40.0%
TGATGTTAGGCATGTGTTGA+AGG - chr8_1:12700097-12700116 Msa1179340:intron 40.0%
! GCATGTGTTGAAGGTTAGTT+TGG - chr8_1:12700106-12700125 Msa1179340:intron 40.0%
!! TTGATGATGGGAAGAAGAGA+AGG - chr8_1:12700273-12700292 Msa1179340:intron 40.0%
! AGAGAAGGATTTTGCTTGGA+TGG - chr8_1:12700288-12700307 Msa1179340:intron 40.0%
! GAGAAGGATTTTGCTTGGAT+GGG - chr8_1:12700289-12700308 Msa1179340:intron 40.0%
GATATCATCAGCAACACTTG+AGG + chr8_1:12700324-12700343 None:intergenic 40.0%
GATATCAAGAAAGGATGGTC+TGG - chr8_1:12700338-12700357 Msa1179340:intron 40.0%
TTCTCATGCTTGATCTTAGC+TGG + chr8_1:12700542-12700561 None:intergenic 40.0%
! CAGGAAAACAGTTGATACAG+TGG - chr8_1:12700686-12700705 Msa1179340:CDS 40.0%
AACTTCTCAACTTCCACAAC+TGG + chr8_1:12700712-12700731 None:intergenic 40.0%
!!! CCTCCTTTGAGTATTTTGGT+GGG + chr8_1:12700757-12700776 None:intergenic 40.0%
!! ACCTCCTTTGAGTATTTTGG+TGG + chr8_1:12700758-12700777 None:intergenic 40.0%
!!! AGGCTGAAGTTTTGGAGAAT+TGG - chr8_1:12701183-12701202 Msa1179340:CDS 40.0%
TTGGCTACACAGAATTTGAG+GGG + chr8_1:12701213-12701232 None:intergenic 40.0%
! AAGGGCACATCAATGAAAAG+TGG - chr8_1:12701233-12701252 Msa1179340:CDS 40.0%
!!! AAAAGTGGATTGGGACCTTT+TGG - chr8_1:12701248-12701267 Msa1179340:intron 40.0%
!! CCTTTGAAGCAAAAACTAGC+AGG + chr8_1:12701274-12701293 None:intergenic 40.0%
!!! CCTGCTAGTTTTTGCTTCAA+AGG - chr8_1:12701271-12701290 Msa1179340:intron 40.0%
! TCTTTTGTAGTGACCAAAGC+AGG - chr8_1:12701357-12701376 Msa1179340:intron 40.0%
GAAGCTGTCATTGAGAAGTT+TGG - chr8_1:12701594-12701613 Msa1179340:intron 40.0%
TTCACAGATTGATCACTCTG+TGG - chr8_1:12701902-12701921 Msa1179340:intron 40.0%
!!! TAGAGAGTTTTGGAGGAGAA+GGG - chr8_1:12701925-12701944 Msa1179340:intron 40.0%
AGATCACAAGATTGAGTGCT+TGG - chr8_1:12702039-12702058 Msa1179340:intron 40.0%
AGAAAGTAGGAGTGGAATAC+TGG - chr8_1:12702097-12702116 Msa1179340:intron 40.0%
TTTCCCCAAACTGCACCTTT+AGG + chr8_1:12699549-12699568 None:intergenic 45.0%
AAAGATGGCTGGATCTAGTG+GGG + chr8_1:12699616-12699635 None:intergenic 45.0%
GAAAGATGGCTGGATCTAGT+GGG + chr8_1:12699617-12699636 None:intergenic 45.0%
GGATCAGCCACAATTCTTCA+TGG - chr8_1:12699672-12699691 Msa1179340:intron 45.0%
!! CTGACCCTTTTCTAAGGGAA+TGG - chr8_1:12699775-12699794 Msa1179340:intron 45.0%
TTTCCTAACCACCCAGTTGT+TGG + chr8_1:12699873-12699892 None:intergenic 45.0%
ACTGGGTGGTTAGGAAAAGA+TGG - chr8_1:12699876-12699895 Msa1179340:intron 45.0%
CACCCTTTGCATTCAGCTAA+AGG - chr8_1:12699993-12700012 Msa1179340:CDS 45.0%
GTGCCTTTAGCTGAATGCAA+AGG + chr8_1:12699999-12700018 None:intergenic 45.0%
! TTGCATTCAGCTAAAGGCAC+TGG - chr8_1:12699999-12700018 Msa1179340:CDS 45.0%
!! AGCTAAAGGCACTGGAATGT+GGG - chr8_1:12700007-12700026 Msa1179340:CDS 45.0%
TGTCCCTGATAAAGGGTTTG+AGG - chr8_1:12700187-12700206 Msa1179340:intron 45.0%
GCTCCTCAAACCCTTTATCA+GGG + chr8_1:12700193-12700212 None:intergenic 45.0%
TGCTCCTCAAACCCTTTATC+AGG + chr8_1:12700194-12700213 None:intergenic 45.0%
! GGTCTGGAATTCATGTGAGT+TGG - chr8_1:12700354-12700373 Msa1179340:intron 45.0%
!! ATTTTGGTGGGCCATTTGAC+AGG + chr8_1:12700745-12700764 None:intergenic 45.0%
TGGCCCACCAAAATACTCAA+AGG - chr8_1:12700751-12700770 Msa1179340:CDS 45.0%
CCCACCAAAATACTCAAAGG+AGG - chr8_1:12700754-12700773 Msa1179340:CDS 45.0%
GCTGGTGTGACACCATTAAT+TGG + chr8_1:12700790-12700809 None:intergenic 45.0%
GCAAAAACTAGCAGGCCAAA+AGG + chr8_1:12701266-12701285 None:intergenic 45.0%
! CACTCTGTGGTAGAGAGTTT+TGG - chr8_1:12701915-12701934 Msa1179340:intron 45.0%
!! TCTGTGGTAGAGAGTTTTGG+AGG - chr8_1:12701918-12701937 Msa1179340:intron 45.0%
!!! GTAGAGAGTTTTGGAGGAGA+AGG - chr8_1:12701924-12701943 Msa1179340:intron 45.0%
GGCCAATGTAGGATAAACTC+TGG + chr8_1:12701967-12701986 None:intergenic 45.0%
GGAAAGATGGCTGGATCTAG+TGG + chr8_1:12699618-12699637 None:intergenic 50.0%
GGTTGAGATGGAAAGATGGC+TGG + chr8_1:12699627-12699646 None:intergenic 50.0%
GGACGGTTGAGATGGAAAGA+TGG + chr8_1:12699631-12699650 None:intergenic 50.0%
TTAGGGATCCAACAACTGGG+TGG - chr8_1:12699862-12699881 Msa1179340:intron 50.0%
GATCCAACAACTGGGTGGTT+AGG - chr8_1:12699867-12699886 Msa1179340:intron 50.0%
!! CAGCTAAAGGCACTGGAATG+TGG - chr8_1:12700006-12700025 Msa1179340:CDS 50.0%
GTTGATACAGTGGCCAGTTG+TGG - chr8_1:12700696-12700715 Msa1179340:CDS 50.0%
GGGCAAAGACAAACCTGCTT+TGG + chr8_1:12701373-12701392 None:intergenic 50.0%
!!! GAGTTTTGGAGGAGAAGGGA+AGG - chr8_1:12701929-12701948 Msa1179340:intron 50.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 12698433 12702329 12698433 ID=Msa1179340;Name=Msa1179340
chr8_1 mRNA 12698433 12702329 12698433 ID=Msa1179340-mRNA-1;Parent=Msa1179340;Name=Msa1179340-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.8|0.83|1|1|1|6|232|575
chr8_1 exon 12698433 12698853 12698433 ID=Msa1179340-mRNA-1:exon:4596;Parent=Msa1179340-mRNA-1
chr8_1 exon 12699147 12699237 12699147 ID=Msa1179340-mRNA-1:exon:4595;Parent=Msa1179340-mRNA-1
chr8_1 exon 12699384 12699619 12699384 ID=Msa1179340-mRNA-1:exon:4594;Parent=Msa1179340-mRNA-1
chr8_1 exon 12699949 12700107 12699949 ID=Msa1179340-mRNA-1:exon:4593;Parent=Msa1179340-mRNA-1
chr8_1 exon 12700395 12701263 12700395 ID=Msa1179340-mRNA-1:exon:4592;Parent=Msa1179340-mRNA-1
chr8_1 exon 12702146 12702329 12702146 ID=Msa1179340-mRNA-1:exon:4591;Parent=Msa1179340-mRNA-1
chr8_1 CDS 12702146 12702329 12702146 ID=Msa1179340-mRNA-1:cds;Parent=Msa1179340-mRNA-1
chr8_1 CDS 12700395 12701263 12700395 ID=Msa1179340-mRNA-1:cds;Parent=Msa1179340-mRNA-1
chr8_1 CDS 12699949 12700107 12699949 ID=Msa1179340-mRNA-1:cds;Parent=Msa1179340-mRNA-1
chr8_1 CDS 12699384 12699619 12699384 ID=Msa1179340-mRNA-1:cds;Parent=Msa1179340-mRNA-1
chr8_1 CDS 12699147 12699237 12699147 ID=Msa1179340-mRNA-1:cds;Parent=Msa1179340-mRNA-1
chr8_1 CDS 12698665 12698853 12698665 ID=Msa1179340-mRNA-1:cds;Parent=Msa1179340-mRNA-1
chr8_1 three_prime_UTR 12698433 12698664 12698433 ID=Msa1179340-mRNA-1:three_prime_utr;Parent=Msa1179340-mRNA-1
Gene Sequence

>Msa1179340

ATGACTATATTCTCTACTATGTGGCTATTGCCTCTCTTTACTTTCATTTATATCAATGGTATTCTTCCTATTGAAGCTACTCACCATGTTTATAGAAACCTTCAGAGTTTATCTTCTGATGATTCCTTCAAACAACCTTACAGAACTGCTTATCATTTCCAACCTCCAAAGAATTGGATAAATGGACCATTGAGTTACAAAGGACTTTATCATCTATTCTACCAATACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTATGGGCACATTCAGTTTCAACTGATCTTGTTAACTGGACCCCACTAGATCCAGCCATCTTTCCATCTCAACCGTCCGATATAAATGGTTGTTGGTCAGGATCAGCCACAATTCTTCATGGTAACAAACCAGCTATTTTATACACTGGAATTGACCCAATGAATCACCAAGTTCAAAATATAGCATACCCCAAAAATTTATCTGACCCTTTTCTAAGGGAATGGATTAAGTCACCAAAAAATCCATTAATGGAACCAACTAGTGAAAATAAAATTAATGCAAGTTCATTTAGGGATCCAACAACTGGGTGGTTAGGAAAAGATGGAAATTGGAGGATAATTATTGGTAGCAAAAGAAACACTAGGGGAATTGCAATTTTGTATAAGAGTAAAGATTTTATTAATTGGATTAAATCAAAACACCCTTTGCATTCAGCTAAAGGCACTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTTTTGAGAATTGGTACATTTGGTGTTGACACATCATTAAATAGTGATGATGTTAGGCATGTGTTGAAGGTTAGTTTGGATGATAAAAAACATGATTATTATCTCATTGGGACTTATAATGATGATAAAGACAAATTTGTCCCTGATAAAGGGTTTGAGGAGCAAAATATTGAACAAATTTTGAGATATGATTATGGAAAATATTATGCATCAAAAACTTTCTTTGATGATGGGAAGAAGAGAAGGATTTTGCTTGGATGGGTCAATGAGTCCTCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATTCATACAATTCCAAGGACTATTTGGTTACACAAGTCAGGAAAACAGTTGATACAGTGGCCAGTTGTGGAAGTTGAGAAGTTAAGAGTAAATCCTGTCAAATGGCCCACCAAAATACTCAAAGGAGGTGAATTGTTGCCAATTAATGGTGTCACACCAGCCCAAGCTGATGTTGAAATTTCATTTGAAGTGAATAATATTAGAGAGGCTGAAGTTTTGGAGAATTGGACAGCCCCTCAAATTCTGTGTAGCCAAAAGGGCACATCAATGAAAAGTGGATTGGGACCTTTTGGCCTGCTAGTTTTTGCTTCAAAGGGGTTGCAAGAGTTCACATCAGTGTTCTTTAGAATATTCAAATACCAACAAAAAAATTTGGTGCTCTTTTGTAGTGACCAAAGCAGGTCTTCTTTGAATAAAGATAATGATTTGACCACTTATGGGACTTTTATAGACGTGGATGTTCTTCATGAGAAGCTGTCATTGAGAAGTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGGAAGGCATGCATTACATCCAGAGTTTATCCTACATTGGCCATCAATGATAAGGCACTACTTTATGCTTTCAATAATGGAACTACCAATGTCAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCACAATCAAATGGAAAATTATAA

Protein sequence

>Msa1179340

MTIFSTMWLLPLFTFIYINGILPIEATHHVYRNLQSLSSDDSFKQPYRTAYHFQPPKNWINGPLSYKGLYHLFYQYNPKGAVWGNIVWAHSVSTDLVNWTPLDPAIFPSQPSDINGCWSGSATILHGNKPAILYTGIDPMNHQVQNIAYPKNLSDPFLREWIKSPKNPLMEPTSENKINASSFRDPTTGWLGKDGNWRIIIGSKRNTRGIAILYKSKDFINWIKSKHPLHSAKGTGMWECPDFFPVLRIGTFGVDTSLNSDDVRHVLKVSLDDKKHDYYLIGTYNDDKDKFVPDKGFEEQNIEQILRYDYGKYYASKTFFDDGKKRRILLGWVNESSSVADDIKKGWSGIHTIPRTIWLHKSGKQLIQWPVVEVEKLRVNPVKWPTKILKGGELLPINGVTPAQADVEISFEVNNIREAEVLENWTAPQILCSQKGTSMKSGLGPFGLLVFASKGLQEFTSVFFRIFKYQQKNLVLFCSDQSRSSLNKDNDLTTYGTFIDVDVLHEKLSLRSLIDHSVVESFGGEGKACITSRVYPTLAINDKALLYAFNNGTTNVKITRLSAWSMKKAQSNGKL*