AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165670 MtrunA17_Chr7g0269511 96.991 565 17 0 1 565 1 565 0.0 1135
Msa1165670 MtrunA17_Chr7g0269521 67.041 534 168 4 36 565 34 563 0.0 733
Msa1165670 MtrunA17_Chr1g0175661 64.505 555 180 5 14 565 19 559 0.0 732
Msa1165670 MtrunA17_Chr1g0195301 66.417 533 174 3 36 565 26 556 0.0 724
Msa1165670 MtrunA17_Chr1g0195321 66.417 533 174 3 36 565 26 556 0.0 724
Msa1165670 MtrunA17_Chr1g0195331 63.732 568 191 4 1 565 1 556 0.0 723
Msa1165670 MtrunA17_Chr1g0195351 63.380 568 191 5 1 565 1 554 0.0 714
Msa1165670 MtrunA17_Chr7g0269531 62.172 534 196 5 34 564 35 565 0.0 678
Msa1165670 MtrunA17_Chr1g0192331 52.751 527 217 6 37 560 27 524 0.0 539
Msa1165670 MtrunA17_Chr3g0080381 50.909 550 238 11 40 566 90 630 1.50e-180 523
Msa1165670 MtrunA17_Chr8g0354911 50.462 541 246 8 41 564 77 612 2.82e-178 517
Msa1165670 MtrunA17_Chr1g0195311 77.154 267 61 0 299 565 49 315 8.46e-155 446
Msa1165670 MtrunA17_Chr7g0269541 48.984 492 223 8 72 560 86 552 5.44e-149 440
Msa1165670 MtrunA17_Chr4g0011771 45.438 537 224 18 42 564 32 513 1.81e-133 399
Msa1165670 MtrunA17_Chr8g0391311 43.691 531 268 9 41 564 35 541 3.48e-133 399
Msa1165670 MtrunA17_Chr8g0391291 43.691 531 268 9 41 564 33 539 1.67e-132 397
Msa1165670 MtrunA17_Chr4g0011791 45.369 529 231 14 42 564 33 509 7.33e-132 394
Msa1165670 MtrunA17_Chr1g0147051 46.311 488 228 11 93 564 138 607 1.03e-130 395
Msa1165670 MtrunA17_Chr2g0302021 46.482 469 211 10 101 564 92 525 4.32e-130 390
Msa1165670 MtrunA17_Chr4g0069881 40.285 561 285 11 14 564 15 535 7.31e-129 387
Msa1165670 MtrunA17_Chr8g0345281 42.777 533 284 8 40 564 70 589 6.69e-126 382
Msa1165670 MtrunA17_Chr3g0126771 41.197 585 289 15 9 564 39 597 2.42e-125 380
Msa1165670 MtrunA17_Chr4g0069841 44.754 467 219 7 101 564 86 516 8.66e-125 376
Msa1165670 MtrunA17_Chr7g0272141 44.586 471 224 10 101 566 106 544 5.01e-124 375
Msa1165670 MtrunA17_Chr8g0354901 45.161 465 226 8 100 564 146 581 6.14e-124 376
Msa1165670 MtrunA17_Chr7g0233831 44.968 467 221 10 101 564 122 555 6.78e-123 373
Msa1165670 MtrunA17_Chr4g0069861 44.000 475 215 10 101 564 83 517 1.84e-122 370
Msa1165670 MtrunA17_Chr3g0080391 43.656 465 233 8 100 564 139 574 1.10e-121 370
Msa1165670 MtrunA17_Chr4g0011751 43.255 467 224 8 93 558 57 483 8.41e-120 362
Msa1165670 MtrunA17_Chr7g0233771 44.540 467 223 10 101 564 121 554 2.35e-119 363
Msa1165670 MtrunA17_Chr7g0233801 42.348 477 240 9 90 564 110 553 1.15e-114 352
Msa1165670 MtrunA17_Chr4g0018371 39.147 539 273 12 42 564 40 539 2.32e-114 350
Msa1165670 MtrunA17_Chr3g0090091 39.286 532 275 13 42 564 36 528 4.73e-112 344
Msa1165670 MtrunA17_Chr3g0079361 42.241 464 227 9 104 564 102 527 1.66e-110 340
Msa1165670 MtrunA17_Chr3g0079341 42.457 464 226 10 104 564 102 527 6.48e-110 338
Msa1165670 MtrunA17_Chr3g0079351 41.595 464 230 10 104 564 102 527 9.44e-110 338
Msa1165670 MtrunA17_Chr4g0069891 40.830 458 255 5 101 558 146 587 1.60e-109 340
Msa1165670 MtrunA17_Chr2g0302001 51.525 295 140 1 270 564 146 437 2.53e-107 328
Msa1165670 MtrunA17_Chr8g0345211 38.505 535 288 15 40 564 79 582 3.78e-102 320
Msa1165670 MtrunA17_Chr7g0270691 35.214 585 324 17 1 565 1 550 1.27e-100 315
Msa1165670 MtrunA17_Chr1g0194091 38.333 480 254 7 101 560 108 565 3.39e-100 315
Msa1165670 MtrunA17_Chr1g0194081 35.768 534 306 9 40 560 50 559 1.37e-97 308
Msa1165670 MtrunA17_Chr1g0192321 37.838 481 265 11 98 561 117 580 7.45e-97 306
Msa1165670 MtrunA17_Chr1g0192311 37.849 465 262 8 101 560 124 566 2.96e-94 300
Msa1165670 MtrunA17_Chr1g0192281 37.849 465 262 8 101 560 124 566 2.96e-94 300
Msa1165670 MtrunA17_Chr3g0129921 35.345 580 297 19 11 559 27 559 2.57e-93 296
Msa1165670 MtrunA17_Chr2g0301931 51.408 284 134 2 283 566 15 294 3.29e-93 287
Msa1165670 MtrunA17_Chr8g0384121 34.687 591 297 18 8 559 19 559 1.84e-92 295
Msa1165670 MtrunA17_Chr7g0272151 32.916 559 295 9 42 561 63 580 1.69e-91 293
Msa1165670 MtrunA17_Chr4g0000121 36.933 463 269 7 101 560 111 553 1.68e-90 289
Msa1165670 MtrunA17_Chr1g0192301 37.149 463 268 7 101 560 129 571 2.84e-90 289
Msa1165670 MtrunA17_Chr4g0067611 35.669 471 271 8 100 560 120 568 2.94e-87 281
Msa1165670 MtrunA17_Chr7g0234711 55.844 231 100 2 336 564 39 269 9.06e-87 270
Msa1165670 MtrunA17_Chr4g0067601 35.169 472 274 7 100 561 120 569 6.18e-86 278
Msa1165670 MtrunA17_Chr7g0270651 34.719 481 281 6 98 564 105 566 3.04e-84 273
Msa1165670 MtrunA17_Chr2g0295531 33.216 569 325 13 5 561 18 543 6.51e-83 271
Msa1165670 MtrunA17_Chr7g0270661 35.510 490 265 8 101 564 108 572 9.80e-83 269
Msa1165670 MtrunA17_Chr7g0270671 35.510 490 265 8 101 564 108 572 9.80e-83 269
Msa1165670 MtrunA17_Chr2g0295551 32.682 563 342 11 11 561 24 561 3.48e-81 265
Msa1165670 MtrunA17_Chr8g0380581 40.419 334 187 5 230 561 50 373 1.74e-78 252
Msa1165670 MtrunA17_Chr7g0270631 34.025 482 285 6 98 565 93 555 1.81e-78 268
Msa1165670 MtrunA17_Chr7g0270631 32.041 490 294 8 98 564 641 1114 5.24e-68 238
Msa1165670 MtrunA17_Chr5g0437831 41.424 309 175 4 254 560 75 379 2.96e-75 244
Msa1165670 MtrunA17_Chr7g0271381 31.016 561 333 15 12 560 34 552 3.88e-72 241
Msa1165670 MtrunA17_Chr7g0268241 40.635 315 171 6 252 564 50 350 3.02e-71 232
Msa1165670 MtrunA17_Chr2g0334111 40.317 315 170 7 252 564 25 323 4.41e-71 231
Msa1165670 MtrunA17_Chr2g0295541 30.700 557 325 11 42 561 60 592 1.61e-67 229
Msa1165670 MtrunA17_Chr6g0487101 38.689 305 159 7 260 553 93 380 3.88e-56 193
Msa1165670 MtrunA17_Chr8g0389771 37.785 307 161 7 260 553 88 377 1.08e-54 189
Msa1165670 MtrunA17_Chr6g0453551 34.277 318 180 7 251 555 5 306 1.84e-52 181
Msa1165670 MtrunA17_Chr1g0194311 34.615 312 177 8 252 553 74 368 1.48e-49 175
Msa1165670 MtrunA17_Chr8g0391261 54.745 137 61 1 429 564 30 166 4.64e-48 164
Msa1165670 MtrunA17_Chr6g0466961 36.395 294 157 9 241 527 29 299 3.14e-47 168
Msa1165670 MtrunA17_Chr7g0217941 35.640 289 158 8 251 527 5 277 3.54e-47 167
Msa1165670 MtrunA17_Chr7g0258341 33.333 312 184 7 252 553 90 387 2.41e-46 167
Msa1165670 MtrunA17_Chr4g0070051 31.098 328 193 10 236 553 39 343 2.54e-44 160
Msa1165670 MtrunA17_Chr6g0466951 32.423 293 170 8 241 527 58 328 1.79e-42 155
Msa1165670 MtrunA17_Chr5g0446301 33.117 308 177 7 258 553 67 357 5.79e-41 152
Msa1165670 MtrunA17_Chr1g0161731 34.035 285 162 7 252 527 48 315 1.35e-38 145
Msa1165670 MtrunA17_Chr7g0265201 31.169 308 183 7 253 553 100 385 4.09e-38 144
Msa1165670 MtrunA17_Chr5g0399221 28.931 318 197 7 251 556 62 362 5.43e-38 144
Msa1165670 MtrunA17_Chr2g0294321 27.576 330 210 7 234 554 38 347 1.03e-36 139
Msa1165670 MtrunA17_Chr4g0037751 31.068 309 190 8 251 553 70 361 2.96e-35 136
Msa1165670 MtrunA17_Chr5g0440871 31.922 307 185 7 248 553 35 318 1.18e-34 133
Msa1165670 MtrunA17_Chr2g0295851 26.911 327 207 9 234 554 37 337 2.13e-33 130
Msa1165670 MtrunA17_Chr5g0420831 32.979 282 168 8 251 526 70 336 5.00e-33 130
Msa1165670 MtrunA17_Chr2g0299431 38.767 227 119 6 234 454 40 252 1.51e-32 126
Msa1165670 MtrunA17_Chr8g0351871 29.618 314 187 9 251 553 32 322 1.77e-30 122
Msa1165670 MtrunA17_Chr6g0459781 37.430 179 91 5 251 416 12 182 1.66e-28 112
Msa1165670 MtrunA17_Chr5g0437821 37.879 132 81 1 368 498 4 135 2.14e-26 104
Msa1165670 MtrunA17_Chr4g0025841 29.644 253 158 4 247 499 32 264 3.92e-24 102
Msa1165670 MtrunA17_Chr2g0314691 31.100 209 130 5 346 553 6 201 3.15e-23 97.8
Msa1165670 MtrunA17_Chr7g0265161 33.149 181 88 4 320 495 5 157 1.44e-22 97.1
Msa1165670 MtrunA17_Chr5g0440901 35.294 153 89 3 347 499 1 143 1.77e-22 94.0
Msa1165670 MtrunA17_Chr8g0391281 30.492 305 176 10 41 336 33 310 8.94e-21 93.6
Msa1165670 MtrunA17_Chr5g0440891 33.929 168 99 4 248 414 44 200 9.65e-18 82.0
Msa1165670 MtrunA17_Chr6g0459791 38.710 124 64 3 431 553 4 116 7.12e-17 77.0
Msa1165670 MtrunA17_Chr6g0460141 34.286 140 84 3 283 414 5 144 9.90e-15 72.0
Msa1165670 MtrunA17_Chr7g0234731 27.155 232 130 8 104 334 121 314 1.25e-12 68.9
Msa1165670 MtrunA17_Chr4g0073911 28.902 173 110 5 282 446 35 202 1.33e-12 68.2
Msa1165670 MtrunA17_Chr5g0440881 28.873 142 90 3 412 553 9 139 1.89e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165670 AT4G02330.1 62.195 574 197 9 8 565 3 572 0.0 715
Msa1165670 AT1G02810.1 62.956 548 180 6 42 566 32 579 0.0 699
Msa1165670 AT2G47550.1 62.734 534 186 7 37 565 34 559 0.0 655
Msa1165670 AT5G04970.1 48.713 544 253 8 41 566 87 622 4.63e-180 522
Msa1165670 AT3G10720.2 48.519 540 260 6 41 566 82 617 1.33e-177 515
Msa1165670 AT2G26440.1 42.830 530 273 9 42 564 41 547 2.09e-131 395
Msa1165670 AT2G45220.1 43.253 541 230 13 40 564 32 511 1.03e-128 387
Msa1165670 AT1G11580.1 40.422 569 299 10 5 564 20 557 2.30e-128 387
Msa1165670 AT1G11580.2 40.422 569 299 10 5 564 41 578 6.07e-128 387
Msa1165670 AT3G43270.1 45.532 470 230 9 101 566 80 527 9.15e-126 379
Msa1165670 AT1G23200.1 41.852 540 276 11 41 564 37 554 4.11e-125 379
Msa1165670 AT3G10720.1 63.077 260 96 0 306 565 1 260 5.61e-124 365
Msa1165670 AT3G49220.1 44.563 469 236 7 98 564 150 596 8.08e-124 377
Msa1165670 AT3G49220.3 44.563 469 236 7 98 564 195 641 1.78e-123 377
Msa1165670 AT3G60730.1 43.220 472 234 9 101 561 68 516 4.69e-122 370
Msa1165670 AT4G33220.1 45.474 475 229 10 101 564 68 523 1.31e-121 369
Msa1165670 AT1G53830.1 41.713 537 288 8 40 564 64 587 8.85e-120 366
Msa1165670 AT3G05620.1 41.365 498 233 9 88 566 86 543 1.31e-119 364
Msa1165670 AT5G51490.1 40.596 537 267 13 42 564 38 536 1.72e-119 363
Msa1165670 AT5G53370.1 44.492 472 233 10 99 564 137 585 2.82e-119 365
Msa1165670 AT5G53370.2 44.492 472 233 10 99 564 173 621 9.10e-119 365
Msa1165670 AT1G53840.1 40.217 552 285 14 24 558 58 581 1.18e-118 363
Msa1165670 AT3G14310.1 40.693 548 286 9 40 564 61 592 9.41e-118 361
Msa1165670 AT4G33220.2 53.313 332 145 3 234 564 80 402 4.57e-117 353
Msa1165670 AT4G02300.1 42.796 465 234 8 101 561 93 529 6.59e-117 357
Msa1165670 AT4G02320.1 42.742 496 243 12 77 564 56 518 5.92e-116 354
Msa1165670 AT2G43050.1 41.153 503 242 10 69 566 65 518 1.09e-115 353
Msa1165670 AT3G05610.1 40.299 469 252 6 101 565 122 566 1.02e-114 355
Msa1165670 AT5G04960.1 43.823 429 211 8 136 560 158 560 1.12e-114 352
Msa1165670 AT5G51500.1 39.560 546 260 13 42 564 42 540 9.77e-114 349
Msa1165670 AT4G00190.1 40.341 528 249 13 42 564 8 474 2.06e-112 343
Msa1165670 AT2G26450.1 41.202 466 230 9 101 557 174 604 2.50e-112 348
Msa1165670 AT3G59010.1 45.497 433 200 10 136 565 130 529 7.90e-112 343
Msa1165670 AT5G27870.1 40.257 467 249 6 98 560 118 558 6.23e-110 345
Msa1165670 AT3G10710.1 39.139 534 280 14 36 564 68 561 2.02e-108 336
Msa1165670 AT4G33230.1 39.829 467 244 10 101 557 160 599 9.68e-107 333
Msa1165670 AT3G14300.1 42.366 465 229 10 101 555 525 960 1.08e-100 326
Msa1165670 AT5G20860.2 36.802 519 266 13 64 564 64 538 3.83e-100 314
Msa1165670 AT3G47400.1 40.000 470 247 8 101 564 154 594 3.71e-98 310
Msa1165670 AT4G03930.1 41.163 430 221 9 136 564 126 524 5.52e-98 308
Msa1165670 AT3G06830.1 41.395 430 234 8 136 561 150 565 1.58e-97 308
Msa1165670 AT1G11590.1 34.964 552 299 12 33 564 13 524 8.68e-97 305
Msa1165670 AT5G49180.1 38.972 467 257 8 101 560 121 566 9.61e-97 306
Msa1165670 AT3G27980.1 48.089 314 157 3 252 564 189 497 5.17e-95 299
Msa1165670 AT4G15980.1 45.161 310 166 2 252 560 392 698 2.86e-83 274
Msa1165670 AT4G15980.2 45.161 310 166 2 252 560 402 708 4.76e-83 274
Msa1165670 AT5G09760.1 45.223 314 159 7 248 552 237 546 3.00e-82 268
Msa1165670 AT5G09760.2 45.223 314 159 7 248 552 263 572 3.02e-82 268
Msa1165670 AT5G64640.1 34.489 548 287 17 41 557 96 602 1.01e-81 268
Msa1165670 AT1G11370.1 50.000 244 119 1 252 495 46 286 9.84e-81 255
Msa1165670 AT5G20860.1 33.597 506 246 12 64 551 64 497 7.30e-80 260
Msa1165670 AT2G47040.1 30.948 601 360 16 8 564 6 595 1.31e-72 243
Msa1165670 AT2G47030.1 30.151 597 363 12 8 564 6 588 2.50e-72 242
Msa1165670 AT3G62170.1 40.909 308 175 4 254 558 279 582 1.66e-66 227
Msa1165670 AT5G19730.1 36.721 305 165 6 260 553 94 381 1.02e-52 184
Msa1165670 AT2G36700.1 33.766 308 184 5 251 553 41 333 7.04e-50 175
Msa1165670 AT2G21610.1 33.227 313 189 6 251 563 50 342 1.60e-49 175
Msa1165670 AT2G21610.2 33.227 313 189 6 251 563 55 347 2.06e-49 175
Msa1165670 AT1G05310.1 33.333 342 193 7 230 553 64 388 2.55e-49 176
Msa1165670 AT2G36710.1 34.286 315 186 5 251 558 90 390 3.21e-49 176
Msa1165670 AT3G29090.1 36.332 289 156 8 251 527 6 278 5.91e-48 170
Msa1165670 AT5G07430.1 32.515 326 199 6 232 553 47 355 1.67e-46 167
Msa1165670 AT3G17060.1 30.312 320 194 7 244 554 38 337 1.24e-43 159
Msa1165670 AT5G18990.1 34.483 290 157 7 252 527 29 299 7.41e-41 151
Msa1165670 AT2G19150.1 31.529 314 195 7 252 560 41 339 1.24e-39 148
Msa1165670 AT3G24130.1 33.220 295 164 7 247 527 29 304 1.32e-39 147
Msa1165670 AT5G47500.1 30.189 318 187 8 251 553 60 357 1.74e-39 148
Msa1165670 AT5G55590.1 30.818 318 191 7 248 553 78 378 2.56e-37 142
Msa1165670 AT5G07420.1 29.773 309 196 6 249 553 64 355 6.17e-37 141
Msa1165670 AT1G44980.1 45.509 167 88 1 252 418 78 241 1.83e-36 136
Msa1165670 AT5G61680.1 30.421 309 191 8 251 553 68 358 7.54e-36 138
Msa1165670 AT1G69940.1 28.354 328 211 9 231 553 47 355 8.40e-36 138
Msa1165670 AT5G07410.1 28.354 328 211 9 231 553 47 355 3.42e-35 136
Msa1165670 AT2G47280.1 30.063 316 188 8 252 555 35 329 1.46e-34 134
Msa1165670 AT5G55590.2 31.939 263 152 6 248 498 78 325 2.11e-34 133
Msa1165670 AT2G19150.2 32.941 255 153 6 252 501 41 282 2.09e-33 129
Msa1165670 AT5G26810.1 31.928 332 187 11 240 553 23 333 3.40e-33 130
Msa1165670 AT3G49220.2 31.381 239 141 6 98 335 195 411 2.57e-20 94.0

Find 121 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTACATGCAAACATTTA+TGG 0.129976 7_4:+57608849 Msa1165670:CDS
TGGTGCTGTTTCAACATATT+TGG 0.148909 7_4:+57608798 Msa1165670:CDS
TCGCTAGAAACAGATTTATT+TGG 0.177140 7_4:-57607510 None:intergenic
ATTAATTAATTAATTAATTA+AGG 0.178203 7_4:-57609100 None:intergenic
TACAGAGAATGTGACATTTA+TGG 0.181984 7_4:+57608589 Msa1165670:CDS
GTGGATAGAGGTTACAATTT+TGG 0.190584 7_4:-57608651 None:intergenic
AAAGCTAACGTTTATGATTA+TGG 0.233483 7_4:+57606868 Msa1165670:CDS
TATGCTGAGTTTAATAATAC+TGG 0.243616 7_4:+57608937 Msa1165670:CDS
CTCTAACAAAGGATTTAAAA+AGG 0.252908 7_4:+57607311 Msa1165670:CDS
GACAAACCAACAAACTTGTT+TGG 0.275277 7_4:+57607131 Msa1165670:CDS
GTTGGAGATATTTGTTGATT+AGG 0.292074 7_4:-57606939 None:intergenic
AAATCCTTTGTTAGAGTGTT+TGG 0.294966 7_4:-57607304 None:intergenic
GGAACAGTAGATTTCATATT+CGG 0.296112 7_4:+57608610 Msa1165670:CDS
ACATAGCTTGGAAGCCATAT+TGG 0.314129 7_4:-57606689 None:intergenic
CCTGGTGAGATAGGTGTAAT+TGG 0.334751 7_4:-57606787 None:intergenic
TGCTTTCTTTACTAAAGGTT+GGG 0.335009 7_4:+57607245 Msa1165670:CDS
GAGATAGGTGTAATTGGATT+TGG 0.345211 7_4:-57606781 None:intergenic
TTGCTTTCTTTACTAAAGGT+TGG 0.347374 7_4:+57607244 Msa1165670:CDS
ATGTATAATTACCGAATGTT+GGG 0.354549 7_4:-57607689 None:intergenic
TCTCTTGCTTTCTTTACTAA+AGG 0.356675 7_4:+57607240 Msa1165670:CDS
GGTGCTGTTTCAACATATTT+GGG 0.357572 7_4:+57608799 Msa1165670:CDS
CATGCTGCTCCTGGTGAGAT+AGG 0.380293 7_4:-57606796 None:intergenic
AAGCAGTGGCACTTAGAAAC+GGG 0.398121 7_4:+57608488 Msa1165670:CDS
GACCATCCAAACAAGTTTGT+TGG 0.401170 7_4:-57607137 None:intergenic
ATGTTGCTGGGTGGCGTGCT+TGG 0.401190 7_4:+57608884 Msa1165670:CDS
AAGAGAGACACTATAGAGTT+TGG 0.403782 7_4:-57607223 None:intergenic
AACTACTTTGTAAAATAAGT+TGG 0.405498 7_4:+57609215 Msa1165670:three_prime_UTR
ATTTCTTGCTTGGTGATGAT+TGG 0.405620 7_4:+57609046 Msa1165670:CDS
GATGTACCTGTGTCTTGGTT+AGG 0.407899 7_4:-57608727 None:intergenic
GATGATTGGTTGCCTCAAAC+AGG 0.413849 7_4:+57609060 Msa1165670:CDS
TGGGAGAATGGATTTGCAAT+AGG 0.413977 7_4:-57606839 None:intergenic
AATGTATAATTACCGAATGT+TGG 0.421859 7_4:-57607690 None:intergenic
GTGGATTTGCATGCTGCTCC+TGG 0.426506 7_4:-57606805 None:intergenic
GATTTGCAATAGGTTGGGTC+AGG 0.427569 7_4:-57606829 None:intergenic
GAATCGCGCTGAGTAATGTT+TGG 0.438241 7_4:-57607107 None:intergenic
TTGCTTAATTCAACATTTGT+CGG 0.441396 7_4:-57609269 None:intergenic
ACGGTGGCAAATTTCTTGCT+TGG 0.445744 7_4:+57609036 Msa1165670:CDS
GCATTGAATTGTCCACTCAT+TGG 0.449744 7_4:-57608679 None:intergenic
TGTTGCTGGGTGGCGTGCTT+GGG 0.450946 7_4:+57608885 Msa1165670:CDS
AATAAATCTGTTTCTAGCGA+TGG 0.450968 7_4:+57607513 Msa1165670:CDS
TTGCTTTAATTGTACAGTTG+TGG 0.453845 7_4:-57608753 None:intergenic
CGTTTCTAAGTGCCACTGCT+TGG 0.461010 7_4:-57608486 None:intergenic
ATGAATGTTGCAGCTGTGGT+TGG 0.462240 7_4:+57608406 Msa1165670:intron
TAGTGCTCGCACAGCGGTGG+TGG 0.463374 7_4:-57606977 None:intergenic
TGAGAGGGTATTACATAGCT+TGG 0.463691 7_4:-57606701 None:intergenic
GTGTAAGACACCCCTGTTTG+AGG 0.465284 7_4:-57609072 None:intergenic
AGAATGGATTTGCAATAGGT+TGG 0.473235 7_4:-57606835 None:intergenic
GAATGGATTTGCAATAGGTT+GGG 0.475452 7_4:-57606834 None:intergenic
TACAAAGTAGTTATAGTGGA+AGG 0.476675 7_4:-57609204 None:intergenic
GATAATGTGATTAATGTTGC+TGG 0.479559 7_4:+57608871 Msa1165670:CDS
CAGTTTGAAAAGAGCTTGAA+AGG 0.481123 7_4:-57607038 None:intergenic
GCTGGGTGGCGTGCTTGGGA+TGG 0.482960 7_4:+57608889 Msa1165670:CDS
AACCAACAAACTTGTTTGGA+TGG 0.485197 7_4:+57607135 Msa1165670:CDS
CAAGCAGTGGCACTTAGAAA+CGG 0.489043 7_4:+57608487 Msa1165670:CDS
TGTGGTTGGGCAAGGATTCG+TGG 0.498726 7_4:+57608420 Msa1165670:CDS
ATCACAGTGTTGTTGATGGC+TGG 0.499298 7_4:+57607652 Msa1165670:CDS
GTTGATGGCTGGACCACATT+CGG 0.499631 7_4:+57607663 Msa1165670:CDS
AGTTGAGGTCGCTGAGCGAT+TGG 0.500496 7_4:-57607008 None:intergenic
GGCAATCACAGTGTTGTTGA+TGG 0.508915 7_4:+57607648 Msa1165670:CDS
GGATTGATGTACCTGTGTCT+TGG 0.509046 7_4:-57608732 None:intergenic
TTTGCAATAGGTTGGGTCAG+GGG 0.511394 7_4:-57606827 None:intergenic
TTTCATATTCGGAAATGCTA+AGG 0.512250 7_4:+57608621 Msa1165670:CDS
TGAATGTTGCAGCTGTGGTT+GGG 0.516948 7_4:+57608407 Msa1165670:intron
GAGTTTAATAATACTGGGCC+AGG 0.520794 7_4:+57608943 Msa1165670:CDS
ATTGTGACGGTTAGTCAAGA+TGG 0.521081 7_4:+57607444 Msa1165670:CDS
CACAGCGGTGGTGGAAAGAG+TGG 0.524616 7_4:-57606968 None:intergenic
AAGTTTCTTCCAAGTTTACA+AGG 0.525874 7_4:+57607075 Msa1165670:CDS
AGTTTGGTGTCATTAGAAAG+TGG 0.527999 7_4:-57607207 None:intergenic
ATAAATCTGTTTCTAGCGAT+GGG 0.535312 7_4:+57607514 Msa1165670:CDS
ACATTCGGCTCCCCAACATT+CGG 0.540697 7_4:+57607678 Msa1165670:CDS
CTACCATCAGTGCTAGAGCC+TGG 0.540713 7_4:-57608961 None:intergenic
TCATTGGAAGACGTGGATAG+AGG 0.541407 7_4:-57608663 None:intergenic
CGTAAAATTAGCTGCATCCG+TGG 0.542453 7_4:-57609016 None:intergenic
GTTCTAGAATACTCTTTCCA+TGG 0.544216 7_4:-57608826 None:intergenic
AATTGGATTTGGACTAGTAC+CGG 0.546025 7_4:-57606770 None:intergenic
TTAAAGACACATCTTCAGCT+TGG 0.547064 7_4:+57607160 Msa1165670:CDS
GCAATAGGTTGGGTCAGGGG+TGG 0.547288 7_4:-57606824 None:intergenic
AATTCCAAACACTCTAACAA+AGG 0.556033 7_4:+57607300 Msa1165670:CDS
ATTTGCAATAGGTTGGGTCA+GGG 0.557363 7_4:-57606828 None:intergenic
GTTGCAGCTGTGGTTGGGCA+AGG 0.558786 7_4:+57608412 Msa1165670:intron
TGGAAAGAGTGGAGCGACGT+TGG 0.560848 7_4:-57606957 None:intergenic
ACGGTTAGTCAAGATGGAAG+TGG 0.570515 7_4:+57607450 Msa1165670:CDS
CCAATTACACCTATCTCACC+AGG 0.573664 7_4:+57606787 Msa1165670:CDS
GTGGTTGGGCAAGGATTCGT+GGG 0.574159 7_4:+57608421 Msa1165670:CDS
CAACATATTTGGGAAGACCA+TGG 0.574540 7_4:+57608809 Msa1165670:CDS
GATGATTTAGCTTCTAGCAA+TGG 0.582638 7_4:+57608778 Msa1165670:CDS
ATGCTGAGTTTAATAATACT+GGG 0.583978 7_4:+57608938 Msa1165670:CDS
AAAGAATGAGAAATATTGAG+AGG 0.586083 7_4:-57606717 None:intergenic
ATTAACAAGACTATTATCAC+TGG 0.586139 7_4:+57607627 Msa1165670:CDS
GGGCCAGGCTCTAGCACTGA+TGG 0.587768 7_4:+57608958 Msa1165670:CDS
TTGTAGTGCTCGCACAGCGG+TGG 0.588898 7_4:-57606980 None:intergenic
CTATCATGTGATTAATGCCA+CGG 0.589574 7_4:+57608999 Msa1165670:CDS
TTTACAGTTGCAGTTTCGAA+GGG 0.589810 7_4:+57608527 Msa1165670:CDS
TGCTGTGAAGCACCAAGCAG+TGG 0.592757 7_4:+57608474 Msa1165670:CDS
GATGGTAGAGTGACGTGGCA+AGG 0.596651 7_4:+57608976 Msa1165670:CDS
GAATGTTGGGGAGCCGAATG+TGG 0.602659 7_4:-57607676 None:intergenic
ATGACCATTCGTAACACAGC+AGG 0.603116 7_4:+57608451 Msa1165670:CDS
TCAGAGTGATCAAGTTGGTG+AGG 0.605937 7_4:+57607404 Msa1165670:CDS
AAGAATGAGAAATATTGAGA+GGG 0.609418 7_4:-57606716 None:intergenic
AATGTGTGTATAACGTGTCT+TGG 0.609557 7_4:-57608552 None:intergenic
CTTCTTCAGAGTGATCAAGT+TGG 0.613368 7_4:+57607399 Msa1165670:CDS
ATGGAAAGAGTATTCTAGAA+CGG 0.614937 7_4:+57608828 Msa1165670:CDS
ATGATTGGTTGCCTCAAACA+GGG 0.616738 7_4:+57609061 Msa1165670:CDS
TGATTGGTTGCCTCAAACAG+GGG 0.618420 7_4:+57609062 Msa1165670:CDS
TATCCACGTCTTCCAATGAG+TGG 0.622034 7_4:+57608667 Msa1165670:CDS
TTCAATGCAATCACTGCACA+AGG 0.625555 7_4:+57608694 Msa1165670:CDS
TGTATAATTACCGAATGTTG+GGG 0.625668 7_4:-57607688 None:intergenic
ATTGCTAGAAGCTAAATCAT+CGG 0.626819 7_4:-57608776 None:intergenic
AGCACCTGCTGTGTTACGAA+TGG 0.627389 7_4:-57608455 None:intergenic
ATAATGTGATTAATGTTGCT+GGG 0.635060 7_4:+57608872 Msa1165670:CDS
TGTCCACTCATTGGAAGACG+TGG 0.636776 7_4:-57608670 None:intergenic
CGATTTATGAGTCAGTTAGT+CGG 0.649371 7_4:+57607370 Msa1165670:CDS
TTTATGAGTCAGTTAGTCGG+AGG 0.663720 7_4:+57607373 Msa1165670:CDS
ACAGATCCTAACCAAGACAC+AGG 0.667761 7_4:+57608721 Msa1165670:CDS
TTGAAAGGAAATCAGAGTTG+AGG 0.673596 7_4:-57607023 None:intergenic
TCAAGTTGGTGAGGATGTCG+TGG 0.686328 7_4:+57607413 Msa1165670:CDS
ATCTTGTAGTGCTCGCACAG+CGG 0.715861 7_4:-57606983 None:intergenic
AGCAGTGGCACTTAGAAACG+GGG 0.723770 7_4:+57608489 Msa1165670:CDS
GCACTGATGGTAGAGTGACG+TGG 0.734964 7_4:+57608971 Msa1165670:CDS
CGTGGTGAGAGATATTGTGA+CGG 0.759277 7_4:+57607431 Msa1165670:CDS
ATGTGATTAATGTTGCTGGG+TGG 0.776487 7_4:+57608875 Msa1165670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAATTAATTAATTA+AGG - chr7_4:57609103-57609122 None:intergenic 0.0%
!! AAAAAAAAAAAAAACCAATA+TGG + chr7_4:57606675-57606694 Msa1165670:exon 10.0%
!! AAATATATTGATATATTTGA+TGG - chr7_4:57607733-57607752 None:intergenic 10.0%
!! AGAAATAATTTAACTATTGT+GGG + chr7_4:57607848-57607867 Msa1165670:intron 15.0%
!! AATTATTAAATTGAAAACAG+AGG - chr7_4:57607951-57607970 None:intergenic 15.0%
!!! ATCAAGTAAAGATTTTATAT+AGG + chr7_4:57608320-57608339 Msa1165670:intron 15.0%
!! TCTAACAAAGGATTTAAAAA+GGG + chr7_4:57607312-57607331 Msa1165670:CDS 20.0%
!!! AAACTTAAAGACATTTTTAC+TGG + chr7_4:57607801-57607820 Msa1165670:intron 20.0%
!! GAGAAATAATTTAACTATTG+TGG + chr7_4:57607847-57607866 Msa1165670:intron 20.0%
!! GAAATAATTTAACTATTGTG+GGG + chr7_4:57607849-57607868 Msa1165670:intron 20.0%
!!! ATCGTTTTTGACATATTTTA+GGG - chr7_4:57607916-57607935 None:intergenic 20.0%
!!! TATCGTTTTTGACATATTTT+AGG - chr7_4:57607917-57607936 None:intergenic 20.0%
!! ACACAAAATATATACATTAG+CGG + chr7_4:57608195-57608214 Msa1165670:intron 20.0%
!! GGTATGTTAAAAAAAATGTT+TGG - chr7_4:57608226-57608245 None:intergenic 20.0%
!!! AGTTTTATAAATAAAGACTG+AGG + chr7_4:57608269-57608288 Msa1165670:intron 20.0%
!!! ATTTTACAAAGTAGTTATAG+TGG - chr7_4:57609211-57609230 None:intergenic 20.0%
!! AACTACTTTGTAAAATAAGT+TGG + chr7_4:57609215-57609234 Msa1165670:three_prime_UTR 20.0%
! AAGAATGAGAAATATTGAGA+GGG - chr7_4:57606719-57606738 None:intergenic 25.0%
! AAAGAATGAGAAATATTGAG+AGG - chr7_4:57606720-57606739 None:intergenic 25.0%
! AAAGCTAACGTTTATGATTA+TGG + chr7_4:57606868-57606887 Msa1165670:CDS 25.0%
!! ATATTTTCACCTTGTAAACT+TGG - chr7_4:57607087-57607106 None:intergenic 25.0%
! CTCTAACAAAGGATTTAAAA+AGG + chr7_4:57607311-57607330 Msa1165670:CDS 25.0%
! CTAACAAAGGATTTAAAAAG+GGG + chr7_4:57607313-57607332 Msa1165670:CDS 25.0%
!!! AAGACTTTTTTGATGATGAT+TGG + chr7_4:57607597-57607616 Msa1165670:CDS 25.0%
! ATTAACAAGACTATTATCAC+TGG + chr7_4:57607627-57607646 Msa1165670:CDS 25.0%
! ATGTATAATTACCGAATGTT+GGG - chr7_4:57607692-57607711 None:intergenic 25.0%
! AATGTATAATTACCGAATGT+TGG - chr7_4:57607693-57607712 None:intergenic 25.0%
! TTGATGGAAAAATATAGAAC+TGG - chr7_4:57607717-57607736 None:intergenic 25.0%
! TTTATACGTTTATGCACAAA+AGG + chr7_4:57608135-57608154 Msa1165670:intron 25.0%
! ATAATGTGATTAATGTTGCT+GGG + chr7_4:57608872-57608891 Msa1165670:CDS 25.0%
! TATGCTGAGTTTAATAATAC+TGG + chr7_4:57608937-57608956 Msa1165670:CDS 25.0%
! ATGCTGAGTTTAATAATACT+GGG + chr7_4:57608938-57608957 Msa1165670:CDS 25.0%
!! TCACTTTGTTCTTTTTCTTT+TGG + chr7_4:57609174-57609193 Msa1165670:three_prime_UTR 25.0%
!! CACTTTGTTCTTTTTCTTTT+GGG + chr7_4:57609175-57609194 Msa1165670:three_prime_UTR 25.0%
! TTGCTTAATTCAACATTTGT+CGG - chr7_4:57609272-57609291 None:intergenic 25.0%
! ATAGCATTTTCACAAAACAC+CGG + chr7_4:57606751-57606770 Msa1165670:CDS 30.0%
!!! TCATAAACGTTAGCTTTTTG+AGG - chr7_4:57606865-57606884 None:intergenic 30.0%
! GTTGGAGATATTTGTTGATT+AGG - chr7_4:57606942-57606961 None:intergenic 30.0%
AAGTTTCTTCCAAGTTTACA+AGG + chr7_4:57607075-57607094 Msa1165670:CDS 30.0%
TCTCTTGCTTTCTTTACTAA+AGG + chr7_4:57607240-57607259 Msa1165670:CDS 30.0%
TTGCTTTCTTTACTAAAGGT+TGG + chr7_4:57607244-57607263 Msa1165670:CDS 30.0%
TGCTTTCTTTACTAAAGGTT+GGG + chr7_4:57607245-57607264 Msa1165670:CDS 30.0%
!! ATTTTGAAAGGCGGTTTTAT+TGG - chr7_4:57607283-57607302 None:intergenic 30.0%
!! AGAGTGTTTGGAATTTTGAA+AGG - chr7_4:57607295-57607314 None:intergenic 30.0%
AATTCCAAACACTCTAACAA+AGG + chr7_4:57607300-57607319 Msa1165670:CDS 30.0%
! AAATCCTTTGTTAGAGTGTT+TGG - chr7_4:57607307-57607326 None:intergenic 30.0%
TCGCTAGAAACAGATTTATT+TGG - chr7_4:57607513-57607532 None:intergenic 30.0%
!! AATAAATCTGTTTCTAGCGA+TGG + chr7_4:57607513-57607532 Msa1165670:CDS 30.0%
!! ATAAATCTGTTTCTAGCGAT+GGG + chr7_4:57607514-57607533 Msa1165670:CDS 30.0%
! TTTTTGATCTATGTTACTGC+TGG + chr7_4:57607540-57607559 Msa1165670:CDS 30.0%
!!! TTTTTGATGATGATTGGAGA+TGG + chr7_4:57607603-57607622 Msa1165670:CDS 30.0%
TGTATAATTACCGAATGTTG+GGG - chr7_4:57607691-57607710 None:intergenic 30.0%
TACAGAGAATGTGACATTTA+TGG + chr7_4:57608589-57608608 Msa1165670:CDS 30.0%
GGAACAGTAGATTTCATATT+CGG + chr7_4:57608610-57608629 Msa1165670:CDS 30.0%
TTTCATATTCGGAAATGCTA+AGG + chr7_4:57608621-57608640 Msa1165670:CDS 30.0%
TTGCTTTAATTGTACAGTTG+TGG - chr7_4:57608756-57608775 None:intergenic 30.0%
ATTGCTAGAAGCTAAATCAT+CGG - chr7_4:57608779-57608798 None:intergenic 30.0%
!! ATGGAAAGAGTATTCTAGAA+CGG + chr7_4:57608828-57608847 Msa1165670:CDS 30.0%
GGTTTACATGCAAACATTTA+TGG + chr7_4:57608849-57608868 Msa1165670:CDS 30.0%
GATAATGTGATTAATGTTGC+TGG + chr7_4:57608871-57608890 Msa1165670:CDS 30.0%
! TACAAAGTAGTTATAGTGGA+AGG - chr7_4:57609207-57609226 None:intergenic 30.0%
!! AATTGGATTTGGACTAGTAC+CGG - chr7_4:57606773-57606792 None:intergenic 35.0%
GAGATAGGTGTAATTGGATT+TGG - chr7_4:57606784-57606803 None:intergenic 35.0%
! GAATGGATTTGCAATAGGTT+GGG - chr7_4:57606837-57606856 None:intergenic 35.0%
! AGAATGGATTTGCAATAGGT+TGG - chr7_4:57606838-57606857 None:intergenic 35.0%
!!! AAACGTTAGCTTTTTGAGGT+GGG - chr7_4:57606861-57606880 None:intergenic 35.0%
!!! TAAACGTTAGCTTTTTGAGG+TGG - chr7_4:57606862-57606881 None:intergenic 35.0%
TTGAAAGGAAATCAGAGTTG+AGG - chr7_4:57607026-57607045 None:intergenic 35.0%
CAGTTTGAAAAGAGCTTGAA+AGG - chr7_4:57607041-57607060 None:intergenic 35.0%
! GACAAACCAACAAACTTGTT+TGG + chr7_4:57607131-57607150 Msa1165670:CDS 35.0%
! AACCAACAAACTTGTTTGGA+TGG + chr7_4:57607135-57607154 Msa1165670:CDS 35.0%
TTAAAGACACATCTTCAGCT+TGG + chr7_4:57607160-57607179 Msa1165670:CDS 35.0%
!! AGTTTGGTGTCATTAGAAAG+TGG - chr7_4:57607210-57607229 None:intergenic 35.0%
AAGAGAGACACTATAGAGTT+TGG - chr7_4:57607226-57607245 None:intergenic 35.0%
!!! AAGGCGGTTTTATTGGTTTT+GGG - chr7_4:57607276-57607295 None:intergenic 35.0%
!!! AAAGGCGGTTTTATTGGTTT+TGG - chr7_4:57607277-57607296 None:intergenic 35.0%
!! GTGTTTGGAATTTTGAAAGG+CGG - chr7_4:57607292-57607311 None:intergenic 35.0%
CGATTTATGAGTCAGTTAGT+CGG + chr7_4:57607370-57607389 Msa1165670:CDS 35.0%
! TTTTATGAATGTTGCAGCTG+TGG + chr7_4:57608402-57608421 Msa1165670:intron 35.0%
! TTTTACAGTTGCAGTTTCGA+AGG + chr7_4:57608526-57608545 Msa1165670:CDS 35.0%
TTTACAGTTGCAGTTTCGAA+GGG + chr7_4:57608527-57608546 Msa1165670:CDS 35.0%
AATGTGTGTATAACGTGTCT+TGG - chr7_4:57608555-57608574 None:intergenic 35.0%
! GTGGATAGAGGTTACAATTT+TGG - chr7_4:57608654-57608673 None:intergenic 35.0%
! GATGATTTAGCTTCTAGCAA+TGG + chr7_4:57608778-57608797 Msa1165670:CDS 35.0%
!! TGGTGCTGTTTCAACATATT+TGG + chr7_4:57608798-57608817 Msa1165670:CDS 35.0%
!! GGTGCTGTTTCAACATATTT+GGG + chr7_4:57608799-57608818 Msa1165670:CDS 35.0%
!! GTTCTAGAATACTCTTTCCA+TGG - chr7_4:57608829-57608848 None:intergenic 35.0%
CTATCATGTGATTAATGCCA+CGG + chr7_4:57608999-57609018 Msa1165670:CDS 35.0%
!! ATTTCTTGCTTGGTGATGAT+TGG + chr7_4:57609046-57609065 Msa1165670:CDS 35.0%
ACATAGCTTGGAAGCCATAT+TGG - chr7_4:57606692-57606711 None:intergenic 40.0%
!! TGAGAGGGTATTACATAGCT+TGG - chr7_4:57606704-57606723 None:intergenic 40.0%
! ATTTGCAATAGGTTGGGTCA+GGG - chr7_4:57606831-57606850 None:intergenic 40.0%
! TGGGAGAATGGATTTGCAAT+AGG - chr7_4:57606842-57606861 None:intergenic 40.0%
GACCATCCAAACAAGTTTGT+TGG - chr7_4:57607140-57607159 None:intergenic 40.0%
! TCAGCTTGGAGTTTTCGAAA+TGG + chr7_4:57607174-57607193 Msa1165670:CDS 40.0%
! GTTTTGCTCGTCATCTTAAG+CGG - chr7_4:57607345-57607364 None:intergenic 40.0%
TTTATGAGTCAGTTAGTCGG+AGG + chr7_4:57607373-57607392 Msa1165670:CDS 40.0%
CTTCTTCAGAGTGATCAAGT+TGG + chr7_4:57607399-57607418 Msa1165670:CDS 40.0%
! ATTGTGACGGTTAGTCAAGA+TGG + chr7_4:57607444-57607463 Msa1165670:CDS 40.0%
GCATTGAATTGTCCACTCAT+TGG - chr7_4:57608682-57608701 None:intergenic 40.0%
TTCAATGCAATCACTGCACA+AGG + chr7_4:57608694-57608713 Msa1165670:CDS 40.0%
CAACATATTTGGGAAGACCA+TGG + chr7_4:57608809-57608828 Msa1165670:CDS 40.0%
ATGTGATTAATGTTGCTGGG+TGG + chr7_4:57608875-57608894 Msa1165670:CDS 40.0%
GAGTTTAATAATACTGGGCC+AGG + chr7_4:57608943-57608962 Msa1165670:CDS 40.0%
! CACGGATGCAGCTAATTTTA+CGG + chr7_4:57609017-57609036 Msa1165670:CDS 40.0%
! ATGATTGGTTGCCTCAAACA+GGG + chr7_4:57609061-57609080 Msa1165670:CDS 40.0%
CCTGGTGAGATAGGTGTAAT+TGG - chr7_4:57606790-57606809 None:intergenic 45.0%
CCAATTACACCTATCTCACC+AGG + chr7_4:57606787-57606806 Msa1165670:CDS 45.0%
! TTTGCAATAGGTTGGGTCAG+GGG - chr7_4:57606830-57606849 None:intergenic 45.0%
! GATTTGCAATAGGTTGGGTC+AGG - chr7_4:57606832-57606851 None:intergenic 45.0%
!!! AGCTTTTTGAGGTGGGAGAA+TGG - chr7_4:57606854-57606873 None:intergenic 45.0%
GAATCGCGCTGAGTAATGTT+TGG - chr7_4:57607110-57607129 None:intergenic 45.0%
!! TCAGAGTGATCAAGTTGGTG+AGG + chr7_4:57607404-57607423 Msa1165670:CDS 45.0%
CGTGGTGAGAGATATTGTGA+CGG + chr7_4:57607431-57607450 Msa1165670:CDS 45.0%
! ACGGTTAGTCAAGATGGAAG+TGG + chr7_4:57607450-57607469 Msa1165670:CDS 45.0%
! GGCAATCACAGTGTTGTTGA+TGG + chr7_4:57607648-57607667 Msa1165670:CDS 45.0%
!! ATCACAGTGTTGTTGATGGC+TGG + chr7_4:57607652-57607671 Msa1165670:CDS 45.0%
ATTGTGGGGCTCACACATAA+TGG + chr7_4:57607863-57607882 Msa1165670:intron 45.0%
ATGAATGTTGCAGCTGTGGT+TGG + chr7_4:57608406-57608425 Msa1165670:intron 45.0%
TGAATGTTGCAGCTGTGGTT+GGG + chr7_4:57608407-57608426 Msa1165670:intron 45.0%
ATGACCATTCGTAACACAGC+AGG + chr7_4:57608451-57608470 Msa1165670:CDS 45.0%
CAAGCAGTGGCACTTAGAAA+CGG + chr7_4:57608487-57608506 Msa1165670:CDS 45.0%
AAGCAGTGGCACTTAGAAAC+GGG + chr7_4:57608488-57608507 Msa1165670:CDS 45.0%
TCATTGGAAGACGTGGATAG+AGG - chr7_4:57608666-57608685 None:intergenic 45.0%
TATCCACGTCTTCCAATGAG+TGG + chr7_4:57608667-57608686 Msa1165670:CDS 45.0%
ACAGATCCTAACCAAGACAC+AGG + chr7_4:57608721-57608740 Msa1165670:CDS 45.0%
GATGTACCTGTGTCTTGGTT+AGG - chr7_4:57608730-57608749 None:intergenic 45.0%
GGATTGATGTACCTGTGTCT+TGG - chr7_4:57608735-57608754 None:intergenic 45.0%
CGTAAAATTAGCTGCATCCG+TGG - chr7_4:57609019-57609038 None:intergenic 45.0%
! GGATGCAGCTAATTTTACGG+TGG + chr7_4:57609020-57609039 Msa1165670:CDS 45.0%
ACGGTGGCAAATTTCTTGCT+TGG + chr7_4:57609036-57609055 Msa1165670:CDS 45.0%
! GATGATTGGTTGCCTCAAAC+AGG + chr7_4:57609060-57609079 Msa1165670:CDS 45.0%
! TGATTGGTTGCCTCAAACAG+GGG + chr7_4:57609062-57609081 Msa1165670:CDS 45.0%
!!! TTTTTTTTATAATATTTTTC+AGG - chr7_4:57608247-57608266 None:intergenic 5.0%
ATCTTGTAGTGCTCGCACAG+CGG - chr7_4:57606986-57607005 None:intergenic 50.0%
!! TCAAGTTGGTGAGGATGTCG+TGG + chr7_4:57607413-57607432 Msa1165670:CDS 50.0%
!! GTTGATGGCTGGACCACATT+CGG + chr7_4:57607663-57607682 Msa1165670:CDS 50.0%
ACATTCGGCTCCCCAACATT+CGG + chr7_4:57607678-57607697 Msa1165670:CDS 50.0%
! TGGGGCTCACACATAATGGA+GGG + chr7_4:57607867-57607886 Msa1165670:intron 50.0%
AGCACCTGCTGTGTTACGAA+TGG - chr7_4:57608458-57608477 None:intergenic 50.0%
! CGTTTCTAAGTGCCACTGCT+TGG - chr7_4:57608489-57608508 None:intergenic 50.0%
AGCAGTGGCACTTAGAAACG+GGG + chr7_4:57608489-57608508 Msa1165670:CDS 50.0%
TGTCCACTCATTGGAAGACG+TGG - chr7_4:57608673-57608692 None:intergenic 50.0%
GTGTAAGACACCCCTGTTTG+AGG - chr7_4:57609075-57609094 None:intergenic 50.0%
CATGCTGCTCCTGGTGAGAT+AGG - chr7_4:57606799-57606818 None:intergenic 55.0%
GTGGATTTGCATGCTGCTCC+TGG - chr7_4:57606808-57606827 None:intergenic 55.0%
TGGAAAGAGTGGAGCGACGT+TGG - chr7_4:57606960-57606979 None:intergenic 55.0%
AGTTGAGGTCGCTGAGCGAT+TGG - chr7_4:57607011-57607030 None:intergenic 55.0%
GAATGTTGGGGAGCCGAATG+TGG - chr7_4:57607679-57607698 None:intergenic 55.0%
GTGGGGCTCACACATAATGG+AGG + chr7_4:57607866-57607885 Msa1165670:intron 55.0%
TGTGGTTGGGCAAGGATTCG+TGG + chr7_4:57608420-57608439 Msa1165670:CDS 55.0%
GTGGTTGGGCAAGGATTCGT+GGG + chr7_4:57608421-57608440 Msa1165670:CDS 55.0%
! TGCTGTGAAGCACCAAGCAG+TGG + chr7_4:57608474-57608493 Msa1165670:CDS 55.0%
CTACCATCAGTGCTAGAGCC+TGG - chr7_4:57608964-57608983 None:intergenic 55.0%
! GCACTGATGGTAGAGTGACG+TGG + chr7_4:57608971-57608990 Msa1165670:CDS 55.0%
GATGGTAGAGTGACGTGGCA+AGG + chr7_4:57608976-57608995 Msa1165670:CDS 55.0%
! GCAATAGGTTGGGTCAGGGG+TGG - chr7_4:57606827-57606846 None:intergenic 60.0%
!! CACAGCGGTGGTGGAAAGAG+TGG - chr7_4:57606971-57606990 None:intergenic 60.0%
TTGTAGTGCTCGCACAGCGG+TGG - chr7_4:57606983-57607002 None:intergenic 60.0%
GTTGCAGCTGTGGTTGGGCA+AGG + chr7_4:57608412-57608431 Msa1165670:intron 60.0%
ATGTTGCTGGGTGGCGTGCT+TGG + chr7_4:57608884-57608903 Msa1165670:CDS 60.0%
TGTTGCTGGGTGGCGTGCTT+GGG + chr7_4:57608885-57608904 Msa1165670:CDS 60.0%
TAGTGCTCGCACAGCGGTGG+TGG - chr7_4:57606980-57606999 None:intergenic 65.0%
! GGGCCAGGCTCTAGCACTGA+TGG + chr7_4:57608958-57608977 Msa1165670:CDS 65.0%
GCTGGGTGGCGTGCTTGGGA+TGG + chr7_4:57608889-57608908 Msa1165670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57606668 57609336 57606668 ID=Msa1165670;Name=Msa1165670
chr7_4 mRNA 57606668 57609336 57606668 ID=Msa1165670-mRNA-1;Parent=Msa1165670;Name=Msa1165670-mRNA-1;_AED=0.23;_eAED=0.23;_QI=26|1|1|1|1|1|2|223|566
chr7_4 exon 57606668 57607699 57606668 ID=Msa1165670-mRNA-1:exon:17471;Parent=Msa1165670-mRNA-1
chr7_4 exon 57608419 57609336 57608419 ID=Msa1165670-mRNA-1:exon:17472;Parent=Msa1165670-mRNA-1
chr7_4 five_prime_UTR 57606668 57606693 57606668 ID=Msa1165670-mRNA-1:five_prime_utr;Parent=Msa1165670-mRNA-1
chr7_4 CDS 57606694 57607699 57606694 ID=Msa1165670-mRNA-1:cds;Parent=Msa1165670-mRNA-1
chr7_4 CDS 57608419 57609113 57608419 ID=Msa1165670-mRNA-1:cds;Parent=Msa1165670-mRNA-1
chr7_4 three_prime_UTR 57609114 57609336 57609114 ID=Msa1165670-mRNA-1:three_prime_utr;Parent=Msa1165670-mRNA-1
Gene Sequence

>Msa1165670

ATGGCTTCCAAGCTATGTAATACCCTCTCAATATTTCTCATTCTTTTATCTGTCTCTATAGCATTTTCACAAAACACCGGTACTAGTCCAAATCCAATTACACCTATCTCACCAGGAGCAGCATGCAAATCCACCCCTGACCCAACCTATTGCAAATCCATTCTCCCACCTCAAAAAGCTAACGTTTATGATTATGGTCGATTTTCAGTCAAAAAATCACTATCACAATCTCGACAATTCTCAAACCTAATCAACAAATATCTCCAACGTCGCTCCACTCTTTCCACCACCGCTGTGCGAGCACTACAAGATTGCCAATCGCTCAGCGACCTCAACTCTGATTTCCTTTCAAGCTCTTTTCAAACTGTTAACAAAACAACAAAGTTTCTTCCAAGTTTACAAGGTGAAAATATCCAAACATTACTCAGCGCGATTCTGACAAACCAACAAACTTGTTTGGATGGTCTTAAAGACACATCTTCAGCTTGGAGTTTTCGAAATGGACTCACAATTCCACTTTCTAATGACACCAAACTCTATAGTGTCTCTCTTGCTTTCTTTACTAAAGGTTGGGTTAATCCCAAAACCAATAAAACCGCCTTTCAAAATTCCAAACACTCTAACAAAGGATTTAAAAAGGGGCGTCTACCGCTTAAGATGACGAGCAAAACACGCGCGATTTATGAGTCAGTTAGTCGGAGGAAACTTCTTCAGAGTGATCAAGTTGGTGAGGATGTCGTGGTGAGAGATATTGTGACGGTTAGTCAAGATGGAAGTGGAAACTTTACTACGATTAATGATGCTATTGCTGCAGCTCCAAATAAATCTGTTTCTAGCGATGGGTATTTTTTGATCTATGTTACTGCTGGTGTTTATGAAGAATATGTTACTATTGATAAGAAAAAGACTTTTTTGATGATGATTGGAGATGGTATTAACAAGACTATTATCACTGGCAATCACAGTGTTGTTGATGGCTGGACCACATTCGGCTCCCCAACATTCGCTGTGGTTGGGCAAGGATTCGTGGGTGTGAACATGACCATTCGTAACACAGCAGGTGCTGTGAAGCACCAAGCAGTGGCACTTAGAAACGGGGCAGATTTATCAACATTTTACAGTTGCAGTTTCGAAGGGTACCAAGACACGTTATACACACATTCACTAAGACAATTCTACAGAGAATGTGACATTTATGGAACAGTAGATTTCATATTCGGAAATGCTAAGGTTGTTTTCCAAAATTGTAACCTCTATCCACGTCTTCCAATGAGTGGACAATTCAATGCAATCACTGCACAAGGAAGAACAGATCCTAACCAAGACACAGGTACATCAATCCACAACTGTACAATTAAAGCAACCGATGATTTAGCTTCTAGCAATGGTGCTGTTTCAACATATTTGGGAAGACCATGGAAAGAGTATTCTAGAACGGTTTACATGCAAACATTTATGGATAATGTGATTAATGTTGCTGGGTGGCGTGCTTGGGATGGAGAATTTGCATTGAGCACATTGTATTATGCTGAGTTTAATAATACTGGGCCAGGCTCTAGCACTGATGGTAGAGTGACGTGGCAAGGCTATCATGTGATTAATGCCACGGATGCAGCTAATTTTACGGTGGCAAATTTCTTGCTTGGTGATGATTGGTTGCCTCAAACAGGGGTGTCTTACACTAATTCCTTAATTAATTAA
Protein sequence

>Msa1165670

MASKLCNTLSIFLILLSVSIAFSQNTGTSPNPITPISPGAACKSTPDPTYCKSILPPQKANVYDYGRFSVKKSLSQSRQFSNLINKYLQRRSTLSTTAVRALQDCQSLSDLNSDFLSSSFQTVNKTTKFLPSLQGENIQTLLSAILTNQQTCLDGLKDTSSAWSFRNGLTIPLSNDTKLYSVSLAFFTKGWVNPKTNKTAFQNSKHSNKGFKKGRLPLKMTSKTRAIYESVSRRKLLQSDQVGEDVVVRDIVTVSQDGSGNFTTINDAIAAAPNKSVSSDGYFLIYVTAGVYEEYVTIDKKKTFLMMIGDGINKTIITGNHSVVDGWTTFGSPTFAVVGQGFVGVNMTIRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAKVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQDTGTSIHNCTIKATDDLASSNGAVSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNTGPGSSTDGRVTWQGYHVINATDAANFTVANFLLGDDWLPQTGVSYTNSLIN*