AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0528410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0528410 MtrunA17_Chr4g0005101 65.248 141 47 1 1 141 1 139 1.26e-51 179
Msa0528410 MtrunA17_Chr4g0004691 89.535 86 8 1 148 233 44 128 1.32e-51 166
Msa0528410 MtrunA17_Chr4g0005351 69.307 101 31 0 41 141 75 175 1.06e-42 149
Msa0528410 MtrunA17_Chr4g0005401 69.388 98 30 0 44 141 14 111 8.64e-39 142
Msa0528410 MtrunA17_Chr4g0005331 69.072 97 30 0 41 137 75 171 4.82e-38 140
Msa0528410 MtrunA17_Chr4g0005731 67.021 94 31 0 48 141 1 94 1.52e-34 130
Msa0528410 MtrunA17_Chr2g0330131 57.576 99 33 1 52 150 9 98 3.88e-34 120
Msa0528410 MtrunA17_Chr4g0005261 66.316 95 31 1 48 141 1 95 4.01e-33 126
Msa0528410 MtrunA17_Chr8g0343681 70.000 90 26 1 51 139 40 129 7.02e-33 124
Msa0528410 MtrunA17_Chr8g0343581 61.798 89 34 0 49 137 56 144 2.49e-29 115
Msa0528410 MtrunA17_Chr8g0343631 64.835 91 31 1 47 137 24 113 3.27e-29 115
Msa0528410 MtrunA17_Chr4g0005291 64.130 92 31 1 50 141 67 156 4.13e-29 115
Msa0528410 MtrunA17_Chr8g0362611 59.524 84 34 0 53 136 15 98 4.50e-29 110
Msa0528410 MtrunA17_Chr4g0005381 53.211 109 42 2 19 118 44 152 7.99e-29 106
Msa0528410 MtrunA17_Chr8g0362601 58.696 92 35 1 53 144 15 103 8.01e-29 110
Msa0528410 MtrunA17_Chr4g0005391 63.218 87 32 0 55 141 60 146 1.02e-28 114
Msa0528410 MtrunA17_Chr3g0102221 58.140 86 35 1 52 136 14 99 2.18e-28 105
Msa0528410 MtrunA17_Chr8g0343671 51.818 110 48 2 36 141 32 140 3.07e-27 109
Msa0528410 MtrunA17_Chr3g0102121 61.905 84 31 1 53 135 15 98 4.29e-27 108
Msa0528410 MtrunA17_Chr3g0102251 55.814 86 37 1 53 137 15 100 4.82e-27 105
Msa0528410 MtrunA17_Chr3g0102271 58.621 87 35 1 52 137 14 100 1.51e-26 107
Msa0528410 MtrunA17_Chr8g0342201 52.874 87 41 0 51 137 45 131 2.15e-26 107
Msa0528410 MtrunA17_Chr6g0479651 59.524 84 33 1 57 139 20 103 1.13e-25 105
Msa0528410 MtrunA17_Chr3g0102281 56.322 87 37 1 52 137 14 100 1.62e-25 104
Msa0528410 MtrunA17_Chr5g0415641 47.778 90 47 0 47 136 4 93 1.78e-25 100
Msa0528410 MtrunA17_Chr6g0480381 62.963 81 29 1 56 135 22 102 2.67e-25 103
Msa0528410 MtrunA17_Chr8g0342161 53.571 84 39 0 54 137 14 97 2.70e-25 102
Msa0528410 MtrunA17_Chr1g0172831 60.000 85 33 1 56 139 17 101 8.10e-25 102
Msa0528410 MtrunA17_Chr3g0102171 56.322 87 37 1 52 137 14 100 8.87e-25 102
Msa0528410 MtrunA17_Chr6g0480061 60.759 79 30 1 57 134 20 98 1.18e-24 96.7
Msa0528410 MtrunA17_Chr3g0102131 56.322 87 37 1 52 137 14 100 1.35e-24 102
Msa0528410 MtrunA17_Chr2g0298301 53.571 84 38 1 55 137 20 103 1.47e-24 95.1
Msa0528410 MtrunA17_Chr8g0363491 50.000 86 43 0 51 136 10 95 1.61e-24 97.8
Msa0528410 MtrunA17_Chr3g0102261 55.814 86 37 1 53 137 15 100 1.64e-24 101
Msa0528410 MtrunA17_Chr1g0172811 58.824 85 34 1 56 139 17 101 1.87e-24 101
Msa0528410 MtrunA17_Chr8g0362831 50.000 86 43 0 51 136 10 95 1.99e-24 97.8
Msa0528410 MtrunA17_Chr8g0342221 51.724 87 42 0 51 137 14 100 2.50e-24 100
Msa0528410 MtrunA17_Chr5g0442761 53.684 95 34 2 57 150 15 100 2.84e-24 100
Msa0528410 MtrunA17_Chr8g0372681 50.562 89 44 0 49 137 8 96 2.91e-24 100
Msa0528410 MtrunA17_Chr8g0342911 51.724 87 42 0 51 137 21 107 3.15e-24 100
Msa0528410 MtrunA17_Chr5g0439951 50.562 89 44 0 49 137 9 97 3.94e-24 100
Msa0528410 MtrunA17_Chr3g0119001 58.140 86 35 1 52 137 19 103 4.15e-24 100
Msa0528410 MtrunA17_Chr6g0478451 61.250 80 30 1 57 135 20 99 5.50e-24 100
Msa0528410 MtrunA17_Chr5g0415611 48.276 87 45 0 50 136 13 99 6.87e-24 96.7
Msa0528410 MtrunA17_Chr2g0300251 58.537 82 33 1 57 137 18 99 7.87e-24 99.8
Msa0528410 MtrunA17_Chr8g0362921 48.837 86 44 0 51 136 11 96 1.07e-23 95.9
Msa0528410 MtrunA17_Chr6g0479701 60.494 81 31 1 56 135 21 101 1.08e-23 99.4
Msa0528410 MtrunA17_Chr4g0006771 60.000 80 31 1 57 135 19 98 1.29e-23 99.0
Msa0528410 MtrunA17_Chr6g0482411 50.562 89 43 1 52 139 7 95 1.84e-23 92.8
Msa0528410 MtrunA17_Chr3g0104861 40.323 124 71 1 48 168 8 131 1.93e-23 98.6
Msa0528410 MtrunA17_Chr8g0371711 57.143 84 35 1 57 139 20 103 1.94e-23 98.6
Msa0528410 MtrunA17_Chr8g0382341 42.735 117 64 1 55 168 38 154 1.97e-23 96.7
Msa0528410 MtrunA17_Chr6g0479821 60.494 81 31 1 56 135 18 98 2.05e-23 98.6
Msa0528410 MtrunA17_Chr6g0482441 51.613 93 44 1 48 139 1 93 2.29e-23 98.6
Msa0528410 MtrunA17_Chr8g0342131 49.425 87 44 0 57 143 18 104 3.21e-23 97.8
Msa0528410 MtrunA17_Chr8g0353001 49.438 89 45 0 49 137 6 94 3.81e-23 97.8
Msa0528410 MtrunA17_Chr6g0480451 58.333 84 34 1 57 139 82 165 3.97e-23 97.8
Msa0528410 MtrunA17_Chr3g0084151 52.381 84 39 1 57 139 17 100 4.46e-23 97.4
Msa0528410 MtrunA17_Chr6g0482321 52.809 89 41 1 52 139 7 95 4.74e-23 97.4
Msa0528410 MtrunA17_Chr6g0482471 53.933 89 40 1 52 139 7 95 5.03e-23 97.4
Msa0528410 MtrunA17_Chr3g0081531 56.627 83 35 1 56 137 6 88 6.95e-23 97.1
Msa0528410 MtrunA17_Chr5g0415581 47.126 87 46 0 50 136 13 99 7.26e-23 93.2
Msa0528410 MtrunA17_Chr1g0153511 51.111 90 43 1 48 136 1 90 8.10e-23 96.7
Msa0528410 MtrunA17_Chr6g0482351 53.933 89 40 1 52 139 7 95 8.32e-23 96.7
Msa0528410 MtrunA17_Chr1g0172541 49.462 93 46 1 48 139 1 93 8.53e-23 96.7
Msa0528410 MtrunA17_Chr8g0350801 49.462 93 46 1 48 139 1 93 1.18e-22 96.3
Msa0528410 MtrunA17_Chr8g0354701 55.682 88 38 1 57 143 9 96 1.39e-22 96.3
Msa0528410 MtrunA17_Chr6g0482511 55.952 84 36 1 57 139 33 116 1.49e-22 95.9
Msa0528410 MtrunA17_Chr5g0414681 48.913 92 44 2 48 136 1 92 2.26e-22 90.5
Msa0528410 MtrunA17_Chr6g0479631 61.250 80 30 1 57 135 18 97 2.29e-22 95.5
Msa0528410 MtrunA17_Chr8g0342791 53.086 81 38 0 57 137 8 88 2.30e-22 95.5
Msa0528410 MtrunA17_Chr6g0454961 50.495 101 47 2 36 135 25 123 2.51e-22 95.5
Msa0528410 MtrunA17_Chr6g0480181 55.056 89 38 2 48 134 1 89 2.60e-22 95.1
Msa0528410 MtrunA17_Chr2g0298291 53.571 84 38 1 55 137 20 103 2.76e-22 95.1
Msa0528410 MtrunA17_Chr5g0415571 46.809 94 47 1 47 137 2 95 2.98e-22 90.5
Msa0528410 MtrunA17_Chr6g0479781 50.000 96 47 1 45 139 4 99 3.12e-22 91.3
Msa0528410 MtrunA17_Chr2g0299841 51.724 87 41 1 52 137 50 136 3.21e-22 95.1
Msa0528410 MtrunA17_Chr4g0025701 57.500 80 33 1 57 135 18 97 4.09e-22 94.7
Msa0528410 MtrunA17_Chr5g0415631 47.619 84 44 0 53 136 16 99 4.10e-22 91.7
Msa0528410 MtrunA17_Chr6g0480911 55.435 92 37 2 57 147 18 106 4.19e-22 94.7
Msa0528410 MtrunA17_Chr2g0296471 47.253 91 47 1 52 141 9 99 4.25e-22 90.9
Msa0528410 MtrunA17_Chr6g0482141 49.462 93 46 1 48 139 9 101 4.29e-22 94.7
Msa0528410 MtrunA17_Chr3g0085731 56.790 81 34 1 57 136 20 100 5.05e-22 94.4
Msa0528410 MtrunA17_Chr8g0342621 50.575 87 43 0 51 137 2 88 5.46e-22 94.4
Msa0528410 MtrunA17_Chr4g0025811 58.750 80 32 1 57 135 18 97 5.58e-22 94.4
Msa0528410 MtrunA17_Chr6g0480041 58.750 80 32 1 57 135 18 97 5.88e-22 94.4
Msa0528410 MtrunA17_Chr8g0338901 51.220 82 39 1 57 137 36 117 6.09e-22 94.4
Msa0528410 MtrunA17_Chr4g0025751 58.750 80 32 1 57 135 18 97 6.27e-22 94.4
Msa0528410 MtrunA17_Chr2g0298531 53.571 84 38 1 55 137 20 103 7.29e-22 94.0
Msa0528410 MtrunA17_Chr5g0430531 54.321 81 36 1 57 136 7 87 9.88e-22 92.8
Msa0528410 MtrunA17_Chr3g0077971 48.913 92 46 1 48 138 1 92 1.01e-21 93.6
Msa0528410 MtrunA17_Chr2g0299921 45.833 96 51 1 43 137 1 96 1.19e-21 93.6
Msa0528410 MtrunA17_Chr6g0480521 58.750 80 32 1 57 135 18 97 1.22e-21 93.2
Msa0528410 MtrunA17_Chr3g0118981 55.814 86 37 1 52 137 19 103 1.29e-21 93.2
Msa0528410 MtrunA17_Chr6g0481141 58.750 80 32 1 57 135 69 148 1.44e-21 93.2
Msa0528410 MtrunA17_Chr8g0351551 44.792 96 53 0 42 137 4 99 1.48e-21 93.2
Msa0528410 MtrunA17_Chr4g0018431 53.488 86 40 0 52 137 16 101 1.63e-21 92.8
Msa0528410 MtrunA17_Chr4g0041611 50.526 95 46 1 46 139 9 103 2.10e-21 92.8
Msa0528410 MtrunA17_Chr4g0020591 45.833 96 52 0 44 139 4 99 2.11e-21 92.8
Msa0528410 MtrunA17_Chr6g0482111 40.769 130 68 3 48 168 1 130 2.40e-21 92.4
Msa0528410 MtrunA17_Chr8g0342781 50.000 82 41 0 54 135 5 86 2.40e-21 92.4
Msa0528410 MtrunA17_Chr5g0443771 40.000 120 64 3 55 168 223 340 2.59e-21 91.3
Msa0528410 MtrunA17_Chr6g0479621 58.750 80 32 1 57 135 20 99 2.68e-21 92.4
Msa0528410 MtrunA17_Chr6g0479641 58.750 80 32 1 57 135 18 97 2.69e-21 92.4
Msa0528410 MtrunA17_Chr5g0420331 51.163 86 41 1 57 141 12 97 2.85e-21 92.4
Msa0528410 MtrunA17_Chr8g0338981 47.778 90 44 2 51 137 8 97 3.19e-21 92.0
Msa0528410 MtrunA17_Chr8g0342641 48.276 87 45 0 51 137 2 88 3.34e-21 92.0
Msa0528410 MtrunA17_Chr4g0025741 57.500 80 33 1 57 135 18 97 3.94e-21 91.7
Msa0528410 MtrunA17_Chr5g0443941 49.485 97 43 3 45 137 356 450 4.08e-21 91.7
Msa0528410 MtrunA17_Chr2g0299881 52.439 82 38 1 57 137 18 99 4.17e-21 92.0
Msa0528410 MtrunA17_Chr6g0454951 46.535 101 53 1 38 137 63 163 4.22e-21 91.7
Msa0528410 MtrunA17_Chr8g0352221 49.367 79 40 0 57 135 14 92 4.37e-21 91.7
Msa0528410 MtrunA17_Chr8g0353371 49.425 87 44 0 57 143 11 97 5.85e-21 91.3
Msa0528410 MtrunA17_Chr8g0342741 50.633 79 39 0 57 135 8 86 8.96e-21 90.5
Msa0528410 MtrunA17_Chr5g0443871 40.909 132 67 5 45 168 356 484 9.66e-21 90.5
Msa0528410 MtrunA17_Chr6g0479591 55.422 83 36 1 54 135 15 97 9.84e-21 90.9
Msa0528410 MtrunA17_Chr4g0025831 57.500 80 33 1 57 135 18 97 9.98e-21 90.5
Msa0528410 MtrunA17_Chr3g0087401 55.128 78 32 2 155 232 52 126 1.02e-20 90.1
Msa0528410 MtrunA17_Chr7g0242801 41.379 116 64 2 28 142 62 174 1.23e-20 90.5
Msa0528410 MtrunA17_Chr6g0486311 44.000 100 55 1 47 145 10 109 1.23e-20 90.5
Msa0528410 MtrunA17_Chr6g0479731 54.023 87 39 1 57 142 18 104 1.32e-20 90.1
Msa0528410 MtrunA17_Chr6g0484161 57.500 80 33 1 57 135 18 97 1.50e-20 90.1
Msa0528410 MtrunA17_Chr2g0302011 37.963 108 67 0 40 147 21 128 1.55e-20 89.7
Msa0528410 MtrunA17_Chr8g0342691 45.882 85 46 0 57 141 8 92 1.59e-20 90.1
Msa0528410 MtrunA17_Chr6g0480461 58.750 80 32 1 57 135 18 97 1.70e-20 90.1
Msa0528410 MtrunA17_Chr6g0454821 54.878 82 36 1 57 137 41 122 1.77e-20 90.1
Msa0528410 MtrunA17_Chr6g0451551 56.250 80 34 1 57 135 19 98 1.82e-20 90.1
Msa0528410 MtrunA17_Chr6g0451551 54.286 70 31 1 67 135 170 239 5.59e-15 73.9
Msa0528410 MtrunA17_Chr1g0146421 57.500 80 33 1 57 135 18 97 1.98e-20 89.7
Msa0528410 MtrunA17_Chr5g0444331 47.826 92 46 2 55 145 362 452 2.06e-20 89.4
Msa0528410 MtrunA17_Chr6g0486361 46.000 100 53 1 47 145 10 109 2.17e-20 89.7
Msa0528410 MtrunA17_Chr4g0042011 45.098 102 53 2 41 139 6 107 2.32e-20 89.7
Msa0528410 MtrunA17_Chr6g0482491 49.438 89 43 2 51 137 3 91 2.67e-20 89.4
Msa0528410 MtrunA17_Chr6g0464011 51.852 81 38 1 56 135 188 268 2.78e-20 87.4
Msa0528410 MtrunA17_Chr6g0464011 43.956 91 50 1 48 137 1 91 2.54e-19 84.7
Msa0528410 MtrunA17_Chr5g0443751 48.913 92 45 2 55 145 327 417 2.82e-20 89.0
Msa0528410 MtrunA17_Chr8g0354721 48.387 93 47 1 56 147 8 100 2.88e-20 89.4
Msa0528410 MtrunA17_Chr6g0455031 56.250 80 34 1 57 135 30 109 2.93e-20 89.4
Msa0528410 MtrunA17_Chr6g0478991 50.526 95 43 2 54 147 4 95 3.37e-20 83.2
Msa0528410 MtrunA17_Chr6g0486521 46.809 94 49 1 47 139 10 103 3.44e-20 89.4
Msa0528410 MtrunA17_Chr8g0339011 47.619 84 43 1 53 135 10 93 3.52e-20 89.0
Msa0528410 MtrunA17_Chr2g0299851 50.000 82 40 1 57 137 14 95 3.70e-20 89.0
Msa0528410 MtrunA17_Chr7g0242771 50.633 79 38 1 57 134 16 94 3.84e-20 84.3
Msa0528410 MtrunA17_Chr8g0363871 50.617 81 39 1 57 136 17 97 4.32e-20 84.0
Msa0528410 MtrunA17_Chr2g0299791 48.780 82 41 1 57 137 14 95 4.61e-20 89.0
Msa0528410 MtrunA17_Chr8g0339031 50.000 88 43 1 51 137 10 97 4.78e-20 88.6
Msa0528410 MtrunA17_Chr4g0041951 43.269 104 58 1 39 141 60 163 5.81e-20 88.6
Msa0528410 MtrunA17_Chr4g0041241 52.439 82 38 1 57 137 22 103 6.14e-20 88.6
Msa0528410 MtrunA17_Chr8g0338881 52.439 82 38 1 57 137 36 117 6.46e-20 88.2
Msa0528410 MtrunA17_Chr5g0443931 45.045 111 55 3 31 137 342 450 7.69e-20 87.8
Msa0528410 MtrunA17_Chr8g0343801 44.706 85 47 0 53 137 9 93 9.26e-20 87.8
Msa0528410 MtrunA17_Chr6g0455251 52.439 82 38 1 57 137 26 107 9.58e-20 87.8
Msa0528410 MtrunA17_Chr4g0009401 47.959 98 49 2 41 136 488 585 1.14e-19 87.8
Msa0528410 MtrunA17_Chr6g0455211 52.439 82 38 1 57 137 39 120 1.32e-19 87.4
Msa0528410 MtrunA17_Chr8g0350091 42.105 95 55 0 53 147 9 103 1.36e-19 86.7
Msa0528410 MtrunA17_Chr4g0010521 48.387 93 46 2 48 139 1 92 1.36e-19 87.4
Msa0528410 MtrunA17_Chr6g0481221 56.250 80 34 1 57 135 18 97 1.62e-19 87.0
Msa0528410 MtrunA17_Chr7g0242811 51.899 79 37 1 57 134 43 121 1.67e-19 87.0
Msa0528410 MtrunA17_Chr5g0443781 48.780 82 41 1 55 135 147 228 1.71e-19 85.5
Msa0528410 MtrunA17_Chr2g0302471 55.714 70 28 2 163 232 56 122 1.81e-19 81.6
Msa0528410 MtrunA17_Chr5g0443851 52.439 82 38 1 55 135 361 442 1.89e-19 86.7
Msa0528410 MtrunA17_Chr4g0041231 51.220 82 39 1 57 137 22 103 1.97e-19 87.0
Msa0528410 MtrunA17_Chr6g0480271 56.250 80 34 1 57 135 18 97 2.04e-19 86.7
Msa0528410 MtrunA17_Chr2g0319821 41.935 124 69 3 25 145 10 133 2.06e-19 87.0
Msa0528410 MtrunA17_Chr5g0443861 47.126 87 45 1 54 139 378 464 2.11e-19 86.7
Msa0528410 MtrunA17_Chr3g0085541 47.253 91 47 1 47 136 9 99 2.29e-19 86.7
Msa0528410 MtrunA17_Chr3g0084731 44.211 95 52 1 42 135 2 96 2.31e-19 86.7
Msa0528410 MtrunA17_Chr4g0005851 53.750 80 36 1 57 135 37 116 2.36e-19 86.7
Msa0528410 MtrunA17_Chr6g0454921 51.899 79 37 1 58 135 123 201 2.45e-19 83.2
Msa0528410 MtrunA17_Chr8g0370511 48.837 86 43 1 57 141 11 96 2.47e-19 86.7
Msa0528410 MtrunA17_Chr6g0478741 51.579 95 42 2 54 147 4 95 2.62e-19 86.7
Msa0528410 MtrunA17_Chr6g0454971 52.500 80 37 1 57 135 49 128 2.66e-19 86.7
Msa0528410 MtrunA17_Chr6g0454851 46.535 101 52 2 38 137 70 169 2.74e-19 86.7
Msa0528410 MtrunA17_Chr8g0342671 42.529 87 50 0 51 137 3 89 3.14e-19 86.3
Msa0528410 MtrunA17_Chr4g0009141 44.898 98 53 1 40 136 509 606 3.18e-19 86.3
Msa0528410 MtrunA17_Chr6g0479051 52.632 95 41 2 54 147 4 95 3.87e-19 85.9
Msa0528410 MtrunA17_Chr6g0481001 55.000 80 35 1 57 135 20 99 4.49e-19 85.9
Msa0528410 MtrunA17_Chr6g0478771 52.632 95 41 2 54 147 4 95 4.73e-19 85.9
Msa0528410 MtrunA17_Chr2g0319851 41.121 107 58 2 36 137 30 136 5.73e-19 85.5
Msa0528410 MtrunA17_Chr6g0479671 50.000 92 45 1 45 135 4 95 6.29e-19 85.5
Msa0528410 MtrunA17_Chr8g0354681 46.667 90 47 1 56 144 8 97 6.91e-19 85.5
Msa0528410 MtrunA17_Chr2g0299561 43.434 99 55 1 42 139 5 103 7.41e-19 85.1
Msa0528410 MtrunA17_Chr8g0350121 42.857 91 52 0 57 147 15 105 9.59e-19 84.3
Msa0528410 MtrunA17_Chr6g0486451 45.161 93 50 1 48 139 11 103 9.81e-19 83.2
Msa0528410 MtrunA17_Chr6g0454831 50.549 91 43 2 48 137 1 90 1.07e-18 84.7
Msa0528410 MtrunA17_Chr4g0005891 53.750 80 36 1 57 135 27 106 1.64e-18 84.3
Msa0528410 MtrunA17_Chr6g0486221 48.315 89 44 2 53 139 15 103 1.67e-18 84.3
Msa0528410 MtrunA17_Chr6g0480091 56.250 80 34 1 57 135 18 97 1.70e-18 83.6
Msa0528410 MtrunA17_Chr6g0486301 44.444 99 54 1 42 139 5 103 1.91e-18 84.0
Msa0528410 MtrunA17_Chr6g0455551 41.085 129 69 3 10 137 6 128 2.18e-18 84.0
Msa0528410 MtrunA17_Chr7g0243021 50.000 80 39 1 56 134 12 91 2.20e-18 82.8
Msa0528410 MtrunA17_Chr6g0455131 51.250 80 38 1 57 135 87 166 2.41e-18 83.6
Msa0528410 MtrunA17_Chr6g0478841 51.579 95 42 2 54 147 4 95 3.05e-18 83.6
Msa0528410 MtrunA17_Chr6g0486271 45.745 94 50 1 47 139 10 103 3.24e-18 83.2
Msa0528410 MtrunA17_Chr5g0443961 43.925 107 55 4 33 137 150 253 3.89e-18 81.3
Msa0528410 MtrunA17_Chr8g0368251 53.750 80 36 1 57 135 18 97 4.28e-18 83.2
Msa0528410 MtrunA17_Chr6g0479001 55.422 83 36 1 54 135 4 86 4.55e-18 82.8
Msa0528410 MtrunA17_Chr5g0444051 50.000 82 40 1 57 137 188 269 5.62e-18 81.6
Msa0528410 MtrunA17_Chr5g0444051 43.011 93 48 3 57 145 15 106 6.97e-14 70.1
Msa0528410 MtrunA17_Chr6g0455221 52.439 82 38 1 57 137 11 92 5.77e-18 82.8
Msa0528410 MtrunA17_Chr6g0480951 50.588 85 41 1 56 139 19 103 6.27e-18 80.9
Msa0528410 MtrunA17_Chr4g0041441 52.500 80 37 1 57 135 5 84 6.31e-18 82.4
Msa0528410 MtrunA17_Chr8g0338831 44.706 85 47 0 53 137 10 94 6.61e-18 81.3
Msa0528410 MtrunA17_Chr2g0319921 38.129 139 75 4 5 141 12 141 7.77e-18 82.4
Msa0528410 MtrunA17_Chr4g0072041 46.753 77 37 2 157 232 70 143 8.00e-18 81.6
Msa0528410 MtrunA17_Chr6g0454931 50.000 82 40 1 57 137 50 131 8.04e-18 82.0
Msa0528410 MtrunA17_Chr8g0354711 49.412 85 42 1 53 136 5 89 8.09e-18 82.4
Msa0528410 MtrunA17_Chr4g0041941 50.602 83 40 1 54 135 6 88 9.11e-18 82.0
Msa0528410 MtrunA17_Chr3g0084841 46.237 93 48 2 47 137 8 100 1.07e-17 82.0
Msa0528410 MtrunA17_Chr5g0420341 46.512 86 45 1 57 141 12 97 1.13e-17 81.6
Msa0528410 MtrunA17_Chr3g0084851 46.237 93 48 2 47 137 8 100 1.15e-17 81.6
Msa0528410 MtrunA17_Chr6g0455191 44.248 113 52 3 34 135 284 396 1.23e-17 81.6
Msa0528410 MtrunA17_Chr4g0005871 45.977 87 46 1 57 142 133 219 1.30e-17 81.6
Msa0528410 MtrunA17_Chr4g0009171 46.465 99 49 2 43 137 715 813 1.79e-17 81.3
Msa0528410 MtrunA17_Chr4g0009171 46.250 80 43 0 57 136 7 86 2.81e-15 74.7
Msa0528410 MtrunA17_Chr3g0084771 45.833 96 50 2 43 136 1 96 1.81e-17 80.5
Msa0528410 MtrunA17_Chr4g0010651 51.220 82 38 2 57 137 11 91 1.89e-17 81.3
Msa0528410 MtrunA17_Chr7g0242751 47.059 85 44 1 51 134 40 124 1.94e-17 80.9
Msa0528410 MtrunA17_Chr7g0256881 44.444 90 49 1 47 135 2 91 2.01e-17 81.3
Msa0528410 MtrunA17_Chr2g0319911 45.679 81 43 1 57 136 47 127 2.16e-17 77.4
Msa0528410 MtrunA17_Chr6g0485991 44.681 94 51 1 47 139 10 103 2.25e-17 80.9
Msa0528410 MtrunA17_Chr3g0084721 46.739 92 47 2 48 137 9 100 2.70e-17 80.5
Msa0528410 MtrunA17_Chr4g0009241 46.067 89 47 1 49 136 540 628 3.25e-17 80.5
Msa0528410 MtrunA17_Chr5g0394051 50.000 82 40 1 57 137 25 106 3.40e-17 79.7
Msa0528410 MtrunA17_Chr4g0009271 44.444 99 52 3 41 136 10 108 3.43e-17 77.0
Msa0528410 MtrunA17_Chr4g0041931 46.429 84 44 1 57 139 23 106 3.64e-17 80.1
Msa0528410 MtrunA17_Chr6g0482161 42.553 94 53 1 51 143 7 100 3.75e-17 80.1
Msa0528410 MtrunA17_Chr4g0009041 42.857 98 54 2 41 136 497 594 4.03e-17 80.1
Msa0528410 MtrunA17_Chr4g0009301 43.878 98 53 2 41 136 529 626 4.04e-17 80.1
Msa0528410 MtrunA17_Chr4g0054081 44.118 102 51 4 132 232 42 138 5.02e-17 79.3
Msa0528410 MtrunA17_Chr6g0486481 44.444 90 49 1 51 139 14 103 5.25e-17 79.7
Msa0528410 MtrunA17_Chr6g0480311 56.164 73 31 1 64 135 12 84 5.38e-17 79.7
Msa0528410 MtrunA17_Chr6g0481011 48.810 84 42 1 57 139 23 106 6.41e-17 79.7
Msa0528410 MtrunA17_Chr3g0119591 51.220 82 39 1 57 137 12 93 7.56e-17 79.0
Msa0528410 MtrunA17_Chr3g0119601 52.439 82 38 1 57 137 12 93 8.31e-17 79.3
Msa0528410 MtrunA17_Chr4g0009101 42.857 98 54 2 41 136 527 624 1.07e-16 79.0
Msa0528410 MtrunA17_Chr8g0348541 50.000 84 41 1 59 141 26 109 1.16e-16 79.0
Msa0528410 MtrunA17_Chr7g0255681 48.750 80 40 1 57 135 1016 1095 1.38e-16 78.6
Msa0528410 MtrunA17_Chr7g0255681 47.500 80 41 1 57 135 514 593 1.98e-15 75.5
Msa0528410 MtrunA17_Chr7g0223531 45.556 90 48 1 48 136 1 90 1.63e-16 78.6
Msa0528410 MtrunA17_Chr6g0486731 42.553 94 53 1 47 139 10 103 2.52e-16 77.8
Msa0528410 MtrunA17_Chr7g0248121 47.778 90 44 2 57 145 20 107 5.56e-16 77.0
Msa0528410 MtrunA17_Chr7g0248511 46.591 88 46 1 51 137 20 107 7.51e-16 76.6
Msa0528410 MtrunA17_Chr7g0248521 46.988 83 43 1 56 137 19 101 1.13e-15 75.9
Msa0528410 MtrunA17_Chr2g0311411 41.558 77 40 2 157 232 56 128 2.78e-15 70.9
Msa0528410 MtrunA17_Chr4g0010711 40.741 81 47 1 57 136 519 599 7.11e-15 73.6
Msa0528410 MtrunA17_Chr7g0253531 43.750 80 40 2 155 232 53 129 1.76e-14 72.0
Msa0528410 MtrunA17_Chr7g0253501 43.750 80 40 2 155 232 53 129 1.76e-14 72.0
Msa0528410 MtrunA17_Chr4g0001861 41.558 77 40 2 157 232 56 128 1.90e-14 72.0
Msa0528410 MtrunA17_Chr2g0334001 41.558 77 40 2 157 232 56 128 2.64e-14 71.6
Msa0528410 MtrunA17_Chr8g0353401 46.250 80 42 1 57 135 12 91 3.94e-14 71.2
Msa0528410 MtrunA17_Chr8g0353351 45.238 84 45 1 57 139 15 98 1.31e-13 69.7
Msa0528410 MtrunA17_Chr8g0371821 40.260 77 41 2 157 232 56 128 1.78e-13 68.9
Msa0528410 MtrunA17_Chr6g0474801 41.667 84 48 1 57 139 17 100 2.26e-13 68.9
Msa0528410 MtrunA17_Chr8g0339021 47.222 72 37 1 65 135 13 84 2.48e-13 68.9
Msa0528410 MtrunA17_Chr8g0352211 37.647 85 53 0 53 137 14 98 2.94e-13 68.9
Msa0528410 MtrunA17_Chr6g0474761 41.667 84 48 1 57 139 17 100 4.41e-13 68.2
Msa0528410 MtrunA17_Chr6g0481331 40.964 83 48 1 57 138 58 140 7.72e-13 67.8
Msa0528410 MtrunA17_Chr8g0353361 44.048 84 46 1 57 139 15 98 1.03e-12 67.0
Msa0528410 MtrunA17_Chr3g0098961 50.000 52 26 0 157 208 68 119 2.28e-12 63.5
Msa0528410 MtrunA17_Chr6g0455121 63.043 46 17 0 90 135 15 60 2.44e-12 62.8
Msa0528410 MtrunA17_Chr8g0386141 34.000 100 57 2 140 235 38 132 2.50e-12 65.9
Msa0528410 MtrunA17_Chr5g0443921 44.928 69 37 1 55 122 21 89 2.85e-11 58.5
Msa0528410 MtrunA17_Chr5g0443951 50.000 56 27 1 90 145 3 57 6.62e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0528410 AT4G16990.1 54.348 92 41 1 48 139 1 91 4.39e-23 97.8
Msa0528410 AT4G16990.6 54.348 92 41 1 48 139 1 91 4.44e-23 97.8
Msa0528410 AT4G16990.11 54.348 92 41 1 48 139 1 91 4.44e-23 97.8
Msa0528410 AT4G16990.17 54.348 92 41 1 48 139 1 91 5.20e-23 97.8
Msa0528410 AT4G16990.10 54.348 92 41 1 48 139 1 91 5.20e-23 97.8
Msa0528410 AT4G16990.13 54.348 92 41 1 48 139 1 91 5.40e-23 97.4
Msa0528410 AT4G16990.2 54.348 92 41 1 48 139 1 91 5.40e-23 97.4
Msa0528410 AT4G16990.12 54.348 92 41 1 48 139 1 91 5.57e-23 97.4
Msa0528410 AT4G16990.7 54.348 92 41 1 48 139 1 91 5.57e-23 97.4
Msa0528410 AT3G04220.1 38.971 136 79 1 8 139 10 145 1.87e-22 95.9
Msa0528410 AT3G04220.3 38.971 136 79 1 8 139 10 145 2.09e-22 95.9
Msa0528410 AT4G16950.2 52.326 86 41 0 49 134 4 89 2.26e-22 95.9
Msa0528410 AT3G04220.2 33.333 165 103 2 8 165 10 174 2.30e-22 95.9
Msa0528410 AT4G16950.3 52.326 86 41 0 49 134 4 89 2.65e-22 95.9
Msa0528410 AT4G16950.1 52.326 86 41 0 49 134 4 89 2.67e-22 95.9
Msa0528410 AT4G16950.4 52.326 86 41 0 49 134 4 89 3.00e-22 95.5
Msa0528410 AT4G16950.6 52.326 86 41 0 49 134 4 89 3.12e-22 95.5
Msa0528410 AT4G16950.5 52.326 86 41 0 49 134 4 89 3.14e-22 95.5
Msa0528410 AT4G16990.8 55.422 83 37 0 57 139 76 158 3.43e-22 95.1
Msa0528410 AT4G16900.1 50.000 90 45 0 49 138 4 93 8.36e-22 94.4
Msa0528410 AT4G16900.2 51.163 86 42 0 49 134 4 89 9.10e-22 94.0
Msa0528410 AT4G16900.3 51.163 86 42 0 49 134 4 89 1.09e-21 93.6
Msa0528410 AT1G72940.1 52.874 87 40 1 51 136 3 89 2.28e-21 91.7
Msa0528410 AT1G72900.1 51.111 90 43 1 48 136 1 90 5.58e-21 90.5
Msa0528410 AT1G72920.1 51.111 90 42 2 48 136 1 89 8.21e-21 88.6
Msa0528410 AT5G46490.1 46.154 91 47 1 48 136 1 91 2.46e-20 88.6
Msa0528410 AT1G72950.1 48.315 89 43 2 49 136 5 91 2.75e-20 88.6
Msa0528410 AT2G20142.1 47.826 92 47 1 50 141 2 92 3.17e-20 87.8
Msa0528410 AT1G72930.2 48.889 90 44 2 48 136 1 89 3.74e-20 84.0
Msa0528410 AT5G44510.3 48.193 83 43 0 57 139 40 122 4.30e-20 89.4
Msa0528410 AT5G44510.4 48.193 83 43 0 57 139 40 122 4.58e-20 89.4
Msa0528410 AT5G44510.1 48.193 83 43 0 57 139 40 122 4.84e-20 89.0
Msa0528410 AT5G44510.2 48.193 83 43 0 57 139 40 122 5.46e-20 89.0
Msa0528410 AT5G38340.3 38.889 126 72 2 9 134 14 134 5.47e-20 89.0
Msa0528410 AT5G38340.1 38.889 126 72 2 9 134 14 134 5.47e-20 89.0
Msa0528410 AT1G72930.1 48.889 90 44 2 48 136 1 89 6.74e-20 84.0
Msa0528410 AT5G46490.2 45.652 92 48 1 48 137 1 92 6.77e-20 88.6
Msa0528410 AT5G46260.1 45.652 92 48 1 48 137 1 92 8.26e-20 88.6
Msa0528410 AT4G12010.1 47.253 91 46 2 48 137 1 90 8.85e-20 88.2
Msa0528410 AT5G18350.1 47.872 94 47 1 50 141 11 104 8.87e-20 88.2
Msa0528410 AT5G46490.8 45.652 92 48 1 48 137 1 92 9.07e-20 88.2
Msa0528410 AT5G38344.1 35.115 131 83 1 9 139 14 142 9.20e-20 84.7
Msa0528410 AT5G41540.1 49.451 91 46 0 49 139 3 93 9.74e-20 88.2
Msa0528410 AT5G51630.1 48.864 88 44 1 48 134 1 88 1.07e-19 88.2
Msa0528410 AT5G51630.3 48.864 88 44 1 48 134 1 88 1.08e-19 88.2
Msa0528410 AT5G18370.1 46.988 83 44 0 57 139 61 143 1.55e-19 87.8
Msa0528410 AT4G16890.3 49.425 87 43 1 48 134 3 88 1.59e-19 87.8
Msa0528410 AT4G16890.1 49.425 87 43 1 48 134 12 97 1.68e-19 87.4
Msa0528410 AT4G16890.5 49.425 87 43 1 48 134 3 88 1.71e-19 87.4
Msa0528410 AT4G16890.2 49.425 87 43 1 48 134 12 97 1.89e-19 87.4
Msa0528410 AT5G40910.1 47.872 94 47 1 48 139 1 94 2.03e-19 87.4
Msa0528410 AT5G40910.9 47.872 94 47 1 48 139 1 94 2.03e-19 87.4
Msa0528410 AT3G44630.2 48.101 79 41 0 57 135 94 172 2.76e-19 87.0
Msa0528410 AT3G44630.1 48.101 79 41 0 57 135 94 172 2.76e-19 87.0
Msa0528410 AT3G44630.4 48.101 79 41 0 57 135 94 172 2.76e-19 87.0
Msa0528410 AT5G41550.1 47.368 95 47 1 48 139 1 95 2.85e-19 87.0
Msa0528410 AT5G46270.2 45.652 92 48 1 48 137 1 92 2.90e-19 87.0
Msa0528410 AT5G46490.4 48.148 81 42 0 57 137 69 149 2.91e-19 86.7
Msa0528410 AT1G65850.1 44.086 93 52 0 49 141 25 117 2.93e-19 86.7
Msa0528410 AT5G46490.7 48.148 81 42 0 57 137 52 132 2.93e-19 86.7
Msa0528410 AT5G46490.5 48.148 81 42 0 57 137 52 132 2.93e-19 86.7
Msa0528410 AT5G46490.3 48.148 81 42 0 57 137 69 149 2.94e-19 86.7
Msa0528410 AT5G46270.3 45.652 92 48 1 48 137 1 92 2.95e-19 86.7
Msa0528410 AT5G11250.2 48.235 85 44 0 57 141 62 146 3.09e-19 86.7
Msa0528410 AT5G46490.6 48.148 81 42 0 57 137 52 132 3.11e-19 86.7
Msa0528410 AT5G36930.2 50.000 82 40 1 57 137 17 98 3.18e-19 86.7
Msa0528410 AT3G44630.3 48.101 79 41 0 57 135 94 172 3.26e-19 86.7
Msa0528410 AT3G44480.2 48.101 79 41 0 57 135 98 176 3.37e-19 86.7
Msa0528410 AT5G36930.4 50.000 82 40 1 57 137 14 95 3.46e-19 86.7
Msa0528410 AT5G36930.1 50.000 82 40 1 57 137 14 95 3.46e-19 86.7
Msa0528410 AT3G44480.4 48.101 79 41 0 57 135 98 176 3.46e-19 86.7
Msa0528410 AT3G44480.1 48.101 79 41 0 57 135 98 176 3.46e-19 86.7
Msa0528410 AT4G11170.1 48.352 91 47 0 49 139 3 93 3.86e-19 86.7
Msa0528410 AT5G36930.3 50.000 82 40 1 57 137 14 95 3.88e-19 86.7
Msa0528410 AT2G14080.1 46.835 79 42 0 57 135 56 134 3.89e-19 86.7
Msa0528410 AT4G16860.1 52.564 78 37 0 57 134 13 90 4.36e-19 86.3
Msa0528410 AT5G17680.1 42.056 107 61 1 58 163 19 125 4.57e-19 86.3
Msa0528410 AT3G44480.3 48.101 79 41 0 57 135 98 176 4.59e-19 86.3
Msa0528410 AT3G44480.5 48.101 79 41 0 57 135 98 176 4.59e-19 86.3
Msa0528410 AT5G17680.2 42.056 107 61 1 58 163 19 125 4.66e-19 86.3
Msa0528410 AT4G14370.2 49.398 83 42 0 57 139 14 96 5.66e-19 85.9
Msa0528410 AT4G14370.3 49.398 83 42 0 57 139 14 96 5.66e-19 85.9
Msa0528410 AT5G46270.1 48.148 81 42 0 57 137 23 103 5.80e-19 85.9
Msa0528410 AT5G46270.5 48.148 81 42 0 57 137 23 103 5.80e-19 85.9
Msa0528410 AT5G46270.4 48.148 81 42 0 57 137 23 103 5.80e-19 85.9
Msa0528410 AT5G46510.2 45.882 85 45 1 57 141 9 92 6.64e-19 85.9
Msa0528410 AT5G40100.1 51.852 81 38 1 57 136 12 92 6.80e-19 85.9
Msa0528410 AT1G72860.1 49.438 89 44 1 49 136 4 92 7.03e-19 85.9
Msa0528410 AT5G46510.1 45.882 85 45 1 57 141 9 92 7.19e-19 85.9
Msa0528410 AT1G31540.3 44.565 92 49 1 48 137 1 92 7.45e-19 85.5
Msa0528410 AT1G31540.1 44.565 92 49 1 48 137 1 92 7.45e-19 85.5
Msa0528410 AT1G72860.3 49.438 89 44 1 49 136 4 92 7.55e-19 85.5
Msa0528410 AT3G44400.2 46.988 83 44 0 57 139 48 130 7.61e-19 85.5
Msa0528410 AT3G44400.1 46.988 83 44 0 57 139 48 130 7.61e-19 85.5
Msa0528410 AT3G44400.4 46.988 83 44 0 57 139 48 130 7.61e-19 85.5
Msa0528410 AT3G44400.5 46.988 83 44 0 57 139 48 130 7.61e-19 85.5
Msa0528410 AT3G44400.3 46.988 83 44 0 57 139 48 130 7.61e-19 85.5
Msa0528410 AT1G31540.2 44.565 92 49 1 48 137 1 92 7.66e-19 85.5
Msa0528410 AT5G41750.1 46.988 83 44 0 57 139 13 95 7.84e-19 85.5
Msa0528410 AT5G41750.2 46.988 83 44 0 57 139 13 95 7.84e-19 85.5
Msa0528410 AT1G57630.1 50.617 81 39 1 56 135 21 101 8.41e-19 80.9
Msa0528410 AT4G16960.1 52.564 78 37 0 57 134 13 90 8.68e-19 85.5
Msa0528410 AT1G72860.2 49.438 89 44 1 49 136 4 92 9.70e-19 85.5
Msa0528410 AT1G69550.1 45.882 85 46 0 57 141 80 164 1.26e-18 85.1
Msa0528410 AT1G65850.2 45.882 85 46 0 57 141 48 132 1.45e-18 84.7
Msa0528410 AT5G41740.1 36.029 136 68 3 57 177 16 147 1.67e-18 84.7
Msa0528410 AT5G41740.2 36.029 136 68 3 57 177 16 147 1.98e-18 84.3
Msa0528410 AT5G46520.1 43.478 92 50 1 48 137 1 92 2.44e-18 84.3
Msa0528410 AT1G65390.2 48.810 84 42 1 59 142 24 106 2.66e-18 81.6
Msa0528410 AT4G11340.1 45.918 98 48 2 40 134 206 301 2.80e-18 83.6
Msa0528410 AT5G49140.1 50.000 86 43 0 57 142 15 100 4.06e-18 83.6
Msa0528410 AT4G16990.9 53.947 76 35 0 64 139 16 91 4.07e-18 83.6
Msa0528410 AT1G65390.3 48.810 84 42 1 59 142 24 106 4.66e-18 81.3
Msa0528410 AT5G46520.2 45.679 81 44 0 57 137 50 130 4.99e-18 83.2
Msa0528410 AT1G56540.1 46.988 83 44 0 57 139 15 97 6.29e-18 82.8
Msa0528410 AT4G19500.1 51.282 78 38 0 57 134 11 88 6.53e-18 82.8
Msa0528410 AT4G08450.1 43.956 91 51 0 49 139 3 93 8.13e-18 82.8
Msa0528410 AT4G19510.8 45.652 92 49 1 54 145 54 144 8.26e-18 82.8
Msa0528410 AT4G19510.1 45.652 92 49 1 54 145 54 144 8.26e-18 82.8
Msa0528410 AT4G08450.2 43.956 91 51 0 49 139 3 93 8.26e-18 82.8
Msa0528410 AT4G19510.9 45.652 92 49 1 54 145 54 144 8.39e-18 82.4
Msa0528410 AT4G19510.2 45.652 92 49 1 54 145 14 104 8.86e-18 82.4
Msa0528410 AT4G19510.5 45.652 92 49 1 54 145 54 144 9.03e-18 82.4
Msa0528410 AT4G19510.4 45.652 92 49 1 54 145 54 144 9.03e-18 82.4
Msa0528410 AT4G19510.7 45.652 92 49 1 54 145 54 144 9.03e-18 82.4
Msa0528410 AT4G19510.3 45.652 92 49 1 54 145 54 144 9.12e-18 82.4
Msa0528410 AT5G46450.1 47.500 80 42 0 56 135 12 91 9.14e-18 82.4
Msa0528410 AT5G46450.2 47.500 80 42 0 56 135 12 91 9.46e-18 82.4
Msa0528410 AT5G46450.3 47.500 80 42 0 56 135 12 91 9.72e-18 82.4
Msa0528410 AT4G19510.6 45.652 92 49 1 54 145 54 144 9.90e-18 82.4
Msa0528410 AT4G19510.10 45.652 92 49 1 54 145 14 104 1.00e-17 82.4
Msa0528410 AT1G65390.1 48.810 84 42 1 59 142 24 106 1.12e-17 81.6
Msa0528410 AT1G63750.3 47.727 88 45 1 49 135 9 96 1.20e-17 82.0
Msa0528410 AT4G19920.1 45.679 81 43 1 59 139 52 131 1.36e-17 80.1
Msa0528410 AT5G38850.1 49.367 79 40 0 57 135 9 87 1.39e-17 82.0
Msa0528410 AT1G27180.5 51.220 82 38 2 57 136 12 93 1.49e-17 82.0
Msa0528410 AT1G27180.8 51.220 82 38 2 57 136 12 93 1.49e-17 82.0
Msa0528410 AT1G63730.1 44.565 92 50 1 49 139 4 95 1.90e-17 81.6
Msa0528410 AT1G27180.1 51.220 82 38 2 57 136 176 257 2.08e-17 81.6
Msa0528410 AT1G64070.1 46.835 79 42 0 57 135 14 92 2.44e-17 81.3
Msa0528410 AT5G22690.1 43.529 85 48 0 57 141 10 94 2.64e-17 81.3
Msa0528410 AT1G63860.4 48.276 87 45 0 49 135 6 92 2.94e-17 80.9
Msa0528410 AT1G63860.5 48.276 87 45 0 49 135 6 92 2.94e-17 80.9
Msa0528410 AT1G63860.3 48.276 87 45 0 49 135 6 92 2.94e-17 80.9
Msa0528410 AT5G22690.3 43.529 85 48 0 57 141 10 94 3.04e-17 80.9
Msa0528410 AT5G22690.2 43.529 85 48 0 57 141 10 94 3.13e-17 80.9
Msa0528410 AT5G22690.4 43.529 85 48 0 57 141 10 94 3.24e-17 80.9
Msa0528410 AT1G63860.2 48.276 87 45 0 49 135 6 92 3.30e-17 80.9
Msa0528410 AT1G63860.1 48.276 87 45 0 49 135 6 92 3.44e-17 80.9
Msa0528410 AT1G63860.6 48.276 87 45 0 49 135 6 92 3.45e-17 80.9
Msa0528410 AT1G72840.1 46.809 94 49 1 43 135 1 94 3.88e-17 80.5
Msa0528410 AT5G58120.1 46.988 83 44 0 57 139 15 97 4.74e-17 80.5
Msa0528410 AT1G72840.2 46.809 94 49 1 43 135 1 94 5.02e-17 80.5
Msa0528410 AT1G72840.3 46.809 94 49 1 43 135 1 94 5.02e-17 80.5
Msa0528410 AT2G19070.1 46.835 79 37 2 155 232 56 130 5.81e-17 79.7
Msa0528410 AT3G44670.1 44.578 83 46 0 57 139 94 176 5.93e-17 80.1
Msa0528410 AT3G44670.2 44.578 83 46 0 57 139 94 176 5.93e-17 80.1
Msa0528410 AT1G72910.1 46.667 90 46 2 48 136 1 89 6.05e-17 79.3
Msa0528410 AT3G04210.2 42.169 83 48 0 53 135 62 144 6.11e-17 79.7
Msa0528410 AT3G04210.1 42.169 83 48 0 53 135 62 144 6.11e-17 79.7
Msa0528410 AT2G16870.1 45.055 91 50 0 49 139 4 94 6.73e-17 80.1
Msa0528410 AT1G17600.1 44.330 97 52 2 48 142 2 98 9.92e-17 79.3
Msa0528410 AT1G57830.1 50.000 76 37 1 59 134 23 97 1.16e-16 75.1
Msa0528410 AT5G48770.1 48.780 82 41 1 56 136 13 94 1.25e-16 79.3
Msa0528410 AT5G44870.1 48.276 87 43 2 53 139 9 93 1.26e-16 79.3
Msa0528410 AT1G17615.1 46.591 88 45 2 51 137 10 96 1.32e-16 78.2
Msa0528410 AT1G09665.1 41.379 87 50 1 48 134 1 86 1.73e-16 74.7
Msa0528410 AT1G63740.2 45.783 83 45 0 57 139 42 124 1.74e-16 78.6
Msa0528410 AT1G66090.1 43.373 83 47 0 57 139 26 108 1.76e-16 78.2
Msa0528410 AT1G56510.1 44.565 92 50 1 49 139 4 95 1.86e-16 78.6
Msa0528410 AT5G17880.1 47.727 88 43 2 52 139 14 98 2.20e-16 78.6
Msa0528410 AT5G17880.2 47.727 88 43 2 52 139 14 98 2.24e-16 78.6
Msa0528410 AT1G27170.1 51.316 76 35 2 57 131 14 88 2.42e-16 78.2
Msa0528410 AT2G32140.1 51.316 76 36 1 59 134 23 97 2.52e-16 77.4
Msa0528410 AT1G63880.2 43.820 89 50 0 49 137 6 94 3.26e-16 77.8
Msa0528410 AT4G16920.9 45.000 80 44 0 55 134 7 86 3.75e-16 77.8
Msa0528410 AT4G16920.6 45.000 80 44 0 55 134 7 86 3.83e-16 77.8
Msa0528410 AT4G16920.1 45.000 80 44 0 55 134 7 86 3.97e-16 77.8
Msa0528410 AT4G16920.4 45.000 80 44 0 55 134 7 86 4.05e-16 77.8
Msa0528410 AT4G16920.7 45.000 80 44 0 55 134 7 86 4.05e-16 77.8
Msa0528410 AT1G57670.1 47.436 78 40 1 59 136 11 87 4.07e-16 77.0
Msa0528410 AT1G63880.1 43.820 89 50 0 49 137 6 94 4.52e-16 77.4
Msa0528410 AT5G45200.3 39.080 87 52 1 53 139 15 100 4.81e-16 77.4
Msa0528410 AT4G16920.3 45.000 80 44 0 55 134 7 86 4.87e-16 77.4
Msa0528410 AT4G16920.5 45.000 80 44 0 55 134 7 86 4.87e-16 77.4
Msa0528410 AT4G16920.2 45.000 80 44 0 55 134 7 86 5.41e-16 77.4
Msa0528410 AT4G16920.8 45.000 80 44 0 55 134 7 86 5.41e-16 77.4
Msa0528410 AT5G45200.1 39.080 87 52 1 53 139 15 100 5.60e-16 77.4
Msa0528410 AT1G72890.1 48.235 85 42 2 52 135 35 118 6.02e-16 76.6
Msa0528410 AT4G19530.2 46.341 82 42 2 53 134 12 91 7.30e-16 77.0
Msa0528410 AT4G19530.1 46.341 82 42 2 53 134 12 91 7.71e-16 77.0
Msa0528410 AT1G63870.1 41.837 98 57 0 42 139 2 99 9.29e-16 76.6
Msa0528410 AT5G45220.2 28.571 147 85 2 26 172 300 426 9.84e-16 76.3
Msa0528410 AT1G72890.2 48.235 85 42 2 52 135 35 118 9.90e-16 76.3
Msa0528410 AT5G45060.2 43.750 96 51 2 44 139 3 95 1.07e-15 76.3
Msa0528410 AT5G45060.1 43.750 96 51 2 44 139 3 95 1.07e-15 76.3
Msa0528410 AT5G45220.1 28.571 147 85 2 26 172 300 426 1.15e-15 76.3
Msa0528410 AT1G56520.4 44.565 92 50 1 49 139 4 95 2.61e-15 75.1
Msa0528410 AT1G56520.1 44.565 92 50 1 49 139 4 95 2.75e-15 75.1
Msa0528410 AT5G46470.1 39.535 86 52 0 56 141 13 98 3.19e-15 75.1
Msa0528410 AT1G56520.5 44.565 92 50 1 49 139 4 95 3.25e-15 74.7
Msa0528410 AT4G04110.1 44.444 81 45 0 59 139 45 125 3.37e-15 72.8
Msa0528410 AT1G57850.3 48.684 76 38 1 59 134 14 88 4.13e-15 70.9
Msa0528410 AT1G56520.2 44.565 92 50 1 49 139 4 95 4.15e-15 74.7
Msa0528410 AT1G60320.1 46.154 78 41 1 53 130 20 96 5.25e-15 70.9
Msa0528410 AT4G36150.1 43.820 89 47 2 51 139 15 100 6.21e-15 74.3
Msa0528410 AT5G45250.1 44.086 93 49 2 47 139 8 97 6.80e-15 73.9
Msa0528410 AT2G03300.1 44.737 76 41 1 59 134 9 83 7.06e-15 71.2
Msa0528410 AT5G18360.1 43.590 78 44 0 57 134 16 93 7.21e-15 73.9
Msa0528410 AT1G57850.1 47.436 78 40 1 57 134 12 88 1.13e-14 70.5
Msa0528410 AT4G09430.1 41.053 95 55 1 43 136 1 95 1.42e-14 72.8
Msa0528410 AT5G44900.1 42.683 82 44 2 53 134 16 94 2.37e-14 70.5
Msa0528410 AT1G51270.13 43.678 87 46 2 53 139 185 268 2.63e-14 71.6
Msa0528410 AT1G51270.12 43.678 87 46 2 53 139 185 268 2.63e-14 71.6
Msa0528410 AT1G51270.14 43.678 87 46 2 53 139 185 268 2.63e-14 71.6
Msa0528410 AT1G51270.11 43.678 87 46 2 53 139 185 268 2.63e-14 71.6
Msa0528410 AT1G51270.5 43.678 87 46 2 53 139 186 269 2.85e-14 71.6
Msa0528410 AT5G45230.1 43.038 79 44 1 59 137 13 90 3.74e-14 72.0
Msa0528410 AT1G51270.1 34.351 131 63 3 31 139 310 439 3.79e-14 71.6
Msa0528410 AT1G51270.8 43.678 87 46 2 53 139 356 439 4.66e-14 71.2
Msa0528410 AT1G51270.2 43.678 87 46 2 53 139 356 439 4.66e-14 71.2
Msa0528410 AT1G51270.15 34.351 131 63 3 31 139 139 268 5.17e-14 71.2
Msa0528410 AT5G17970.1 44.578 83 46 0 57 139 16 98 5.70e-14 71.2
Msa0528410 AT1G51270.4 34.351 131 63 3 31 139 70 199 6.11e-14 70.9
Msa0528410 AT1G51270.3 34.351 131 63 3 31 139 310 439 7.13e-14 70.9
Msa0528410 AT1G51270.9 34.351 131 63 3 31 139 262 391 7.21e-14 70.9
Msa0528410 AT1G51270.6 34.351 131 63 3 31 139 262 391 7.21e-14 70.9
Msa0528410 AT1G51270.7 34.351 131 63 3 31 139 262 391 7.21e-14 70.9
Msa0528410 AT1G51270.10 34.351 131 63 3 31 139 262 391 7.21e-14 70.9
Msa0528410 AT1G47370.1 41.975 81 46 1 59 139 16 95 7.51e-14 70.5
Msa0528410 AT2G03030.1 44.595 74 40 1 59 132 9 81 8.13e-14 68.6
Msa0528410 AT5G45070.1 41.250 80 46 1 59 138 16 94 1.00e-13 70.1
Msa0528410 AT4G23515.2 44.444 81 43 2 59 139 11 89 3.35e-13 67.8
Msa0528410 AT5G45080.1 46.053 76 40 1 59 134 17 91 5.01e-13 68.2
Msa0528410 AT4G23515.1 44.444 81 43 2 59 139 11 89 5.75e-13 67.4
Msa0528410 AT5G11250.3 50.000 62 31 0 80 141 3 64 5.95e-13 68.2
Msa0528410 AT5G11250.1 50.000 62 31 0 80 141 3 64 5.95e-13 68.2
Msa0528410 AT5G45000.1 40.230 87 49 2 53 139 13 96 3.25e-12 65.9
Msa0528410 AT3G51570.2 40.230 87 49 2 53 139 17 100 5.34e-12 65.5
Msa0528410 AT3G51570.1 40.230 87 49 2 53 139 17 100 5.72e-12 65.5
Msa0528410 AT5G57840.1 36.585 82 49 1 146 227 45 123 1.04e-11 64.3
Msa0528410 AT5G48930.1 38.356 73 40 2 157 228 56 124 1.52e-11 63.9
Msa0528410 AT1G27170.2 35.556 90 56 2 48 136 7 95 1.77e-11 63.9
Msa0528410 AT4G36140.1 35.789 95 61 0 45 139 38 132 2.92e-11 63.5
Msa0528410 AT2G17060.2 39.506 81 48 1 59 139 20 99 5.16e-11 62.8
Msa0528410 AT2G17060.1 39.506 81 48 1 59 139 20 99 5.47e-11 62.4
Msa0528410 AT5G44920.1 38.272 81 49 1 59 139 13 92 7.56e-11 60.8
Msa0528410 AT5G44920.2 38.272 81 49 1 59 139 13 92 8.13e-11 60.5
Msa0528410 AT1G72870.1 40.860 93 53 1 48 138 1 93 9.59e-11 61.6

Find 52 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCAAACAAAGCATTTA+AGG 0.159075 4_1:-1220230 Msa0528410:intron
TTTCAACTTTATCTCGTATA+TGG 0.237541 4_1:+1220259 None:intergenic
CCTCCTCATCACGACTTCTT+TGG 0.267013 4_1:+1219933 None:intergenic
GGGATGGATCATTGCTCTCT+TGG 0.301522 4_1:-1219993 Msa0528410:CDS
TTTAATGTGTCATCATTATT+GGG 0.316226 4_1:+1214712 None:intergenic
CATCTAATACTTCCAGCTAT+TGG 0.330834 4_1:+1214835 None:intergenic
CTCATCCTCTCACTGGTTGT+GGG 0.356543 4_1:+1214892 None:intergenic
GGATGGATCATTGCTCTCTT+GGG 0.360508 4_1:-1219992 Msa0528410:CDS
TAGTATTTGTATACGAGTTC+AGG 0.367627 4_1:-1220317 Msa0528410:five_prime_UTR
TCTCATCCTCTCACTGGTTG+TGG 0.376206 4_1:+1214891 None:intergenic
TGAGAATATAATCAATGAAA+TGG 0.382957 4_1:+1216941 None:intergenic
CAATAGCTGGAAGTATTAGA+TGG 0.384674 4_1:-1214834 Msa0528410:CDS
TTTAGTGATGATGAACCGTT+TGG 0.389714 4_1:-1220014 Msa0528410:exon
TCACGGCTTTCATAGCCATT+TGG 0.421269 4_1:-1217066 Msa0528410:CDS
GTGCATTACTATCCAATAGC+TGG 0.449711 4_1:-1214847 Msa0528410:CDS
AGTTCAGGCTTTAAACTGTA+AGG 0.449779 4_1:-1220302 Msa0528410:five_prime_UTR
CTTTCATAGCCATTTGGTTG+AGG 0.476444 4_1:-1217060 Msa0528410:CDS
TGTCATCATTATTGGGAGCT+AGG 0.482414 4_1:+1214719 None:intergenic
AAAACATCATAATTTGATTG+AGG 0.487181 4_1:+1217116 None:intergenic
TTTATTATCACCTCATCCTC+AGG 0.489201 4_1:+1219902 None:intergenic
TTAATTGAACTATCAACAAA+GGG 0.492382 4_1:+1214642 None:intergenic
AATGCACTAAAATCTTGCTA+AGG 0.494710 4_1:+1214863 None:intergenic
GGGTACTACTCCTGAGGATG+AGG 0.496888 4_1:-1219912 Msa0528410:intron
GTTGATGAGAAACTTGAGAC+AGG 0.501375 4_1:-1217008 Msa0528410:CDS
AATTGATTACACTCAACCCT+TGG 0.504372 4_1:-1214671 Msa0528410:CDS
GAATTGAATTGTAATGCAAA+GGG 0.512168 4_1:-1214793 Msa0528410:CDS
GGATTCTCTCATCCTCTCAC+TGG 0.524684 4_1:+1214885 None:intergenic
AGAATTGAATTGTAATGCAA+AGG 0.529518 4_1:-1214794 Msa0528410:CDS
CAACAAAGGGATTTCTCCAA+GGG 0.532447 4_1:+1214655 None:intergenic
GTTAATTGAACTATCAACAA+AGG 0.538383 4_1:+1214641 None:intergenic
TCAACAAAGGGATTTCTCCA+AGG 0.554647 4_1:+1214654 None:intergenic
TCGATTGCTTTAAGAAGTGA+AGG 0.555762 4_1:+1216972 None:intergenic
ATGCACTAAAATCTTGCTAA+GGG 0.560800 4_1:+1214864 None:intergenic
AAAACTATGCTTCTTCACAT+TGG 0.564260 4_1:-1216917 Msa0528410:CDS
TTAGTGATGATGAACCGTTT+GGG 0.566769 4_1:-1220013 Msa0528410:exon
CCAAAGAAGTCGTGATGAGG+AGG 0.574893 4_1:-1219933 Msa0528410:CDS
CATCACGACTTCTTTGGACA+CGG 0.575920 4_1:+1219939 None:intergenic
AGACATAGATTGTTGCGGAA+TGG 0.577733 4_1:+1214925 None:intergenic
GAGCAATGATCCATCCCAAA+CGG 0.582044 4_1:+1219999 None:intergenic
TGATGATGAACCGTTTGGGA+TGG 0.586248 4_1:-1220009 Msa0528410:CDS
AATAGCTGGAAGTATTAGAT+GGG 0.595167 4_1:-1214833 Msa0528410:CDS
ATAGTGATCAACTAGCGCGT+TGG 0.598032 4_1:-1214950 Msa0528410:intron
TCACTTCTTAAAGCAATCGA+AGG 0.607233 4_1:-1216969 Msa0528410:CDS
GGAAGTATTAGATGGGCAGA+AGG 0.608145 4_1:-1214826 Msa0528410:CDS
AGGGGCGTGGACATCCGTCA+CGG 0.613486 4_1:-1217083 Msa0528410:CDS
GAAATCCCACAACCAGTGAG+AGG 0.625017 4_1:-1214897 Msa0528410:CDS
TGTCCAAAGAAGTCGTGATG+AGG 0.632393 4_1:-1219936 Msa0528410:CDS
AATGGCTATGAAAGCCGTGA+CGG 0.639366 4_1:+1217069 None:intergenic
TTTGTAGACATAGATTGTTG+CGG 0.641059 4_1:+1214920 None:intergenic
AGTATTAGATGGGCAGAAGG+TGG 0.642848 4_1:-1214823 Msa0528410:CDS
CAAAGAAGTCGTGATGAGGA+GGG 0.645753 4_1:-1219932 Msa0528410:CDS
TGAGGAGGGTACTACTCCTG+AGG 0.705059 4_1:-1219918 Msa0528410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCAAAATTGTTAAAAT+TGG + chr4_1:1216332-1216351 None:intergenic 10.0%
!!! TTTTTTAGTACAAAAAATAA+AGG - chr4_1:1216390-1216409 Msa0528410:intron 10.0%
!! AAGATAAAAGTAATAAAATA+TGG - chr4_1:1216610-1216629 Msa0528410:intron 10.0%
!! TTTATTACCAAAAAAAAAAT+AGG + chr4_1:1217029-1217048 None:intergenic 10.0%
!!! AAAAATCATTTTTAATTACT+TGG - chr4_1:1217327-1217346 Msa0528410:intron 10.0%
!! ATAATATATTAAATTGAGAA+TGG - chr4_1:1218304-1218323 Msa0528410:intron 10.0%
!!! ATTCATTAGTTTTAAAAGAT+TGG + chr4_1:1214910-1214929 None:intergenic 15.0%
!!! AATATTGTTCTTTAAAGTAT+TGG + chr4_1:1215795-1215814 None:intergenic 15.0%
!!! AATTTTTTAGGATTCTTTTT+CGG - chr4_1:1215886-1215905 Msa0528410:intron 15.0%
!! AAATACTATACACTAATTAA+TGG + chr4_1:1215942-1215961 None:intergenic 15.0%
!! AATTATTGAAACAAATTGAA+TGG + chr4_1:1216001-1216020 None:intergenic 15.0%
!! CAAAACAAAAAAACAAATAT+GGG + chr4_1:1216032-1216051 None:intergenic 15.0%
!! ACAAAACAAAAAAACAAATA+TGG + chr4_1:1216033-1216052 None:intergenic 15.0%
!!! CAATTTTGAATTTGTATTAT+TGG - chr4_1:1216339-1216358 Msa0528410:intron 15.0%
!! ACAACTATTAAAATTAAGTA+AGG - chr4_1:1216801-1216820 Msa0528410:intron 15.0%
!! TTCTGGTATAATTAATATTA+GGG + chr4_1:1217087-1217106 None:intergenic 15.0%
!!! TTTCTGGTATAATTAATATT+AGG + chr4_1:1217088-1217107 None:intergenic 15.0%
!! TTATTATTAATACAGATTTC+TGG + chr4_1:1217104-1217123 None:intergenic 15.0%
!!! TTAAAATAGTAACTTTGTTT+TGG + chr4_1:1217249-1217268 None:intergenic 15.0%
!!! TTTTTGTGTTATTTTATGAT+GGG + chr4_1:1217310-1217329 None:intergenic 15.0%
!!! TTTTTTGTGTTATTTTATGA+TGG + chr4_1:1217311-1217330 None:intergenic 15.0%
!!! TTGTAGTTTTTTTTTTCATA+TGG - chr4_1:1217628-1217647 Msa0528410:intron 15.0%
!! TCTACTACTTAATAATAAAA+AGG + chr4_1:1217705-1217724 None:intergenic 15.0%
!!! TGTATTTTGTTTATGTTATT+CGG - chr4_1:1217740-1217759 Msa0528410:intron 15.0%
!! TAGATTCTTCATAAAAATTT+AGG + chr4_1:1217772-1217791 None:intergenic 15.0%
!!! TGAAATAGTTCAATTTTTTT+GGG - chr4_1:1218387-1218406 Msa0528410:intron 15.0%
!!! TTGATCTATATATTTCATTT+TGG + chr4_1:1218957-1218976 None:intergenic 15.0%
!! TAAAAAATGTTCTCAAATAA+AGG - chr4_1:1219139-1219158 Msa0528410:intron 15.0%
!! TACGATATATAAAGATAATA+TGG + chr4_1:1219422-1219441 None:intergenic 15.0%
!!! CCATTTTTAATACAAATTTT+TGG + chr4_1:1219466-1219485 None:intergenic 15.0%
!! CCAAAAATTTGTATTAAAAA+TGG - chr4_1:1219463-1219482 Msa0528410:intron 15.0%
!! TGACAACAATAATATAATAA+TGG + chr4_1:1219666-1219685 None:intergenic 15.0%
!!! TTTGTTAAATTTGTTACATT+TGG - chr4_1:1219705-1219724 Msa0528410:intron 15.0%
!!! TTATTTTGTATTGCAACTTT+TGG - chr4_1:1215271-1215290 Msa0528410:intron 20.0%
!!! TATTTTGTATTGCAACTTTT+GGG - chr4_1:1215272-1215291 Msa0528410:intron 20.0%
!!! ATTTAAAACATAAAGTTGCA+GGG + chr4_1:1215573-1215592 None:intergenic 20.0%
!!! AATTTAAAACATAAAGTTGC+AGG + chr4_1:1215574-1215593 None:intergenic 20.0%
!!! AACAACTTCTTTCTTATTTA+AGG - chr4_1:1215633-1215652 Msa0528410:intron 20.0%
!!! ATTTAAAACATAAAGTTGCA+GGG + chr4_1:1215573-1215592 None:intergenic 20.0%
!!! AATTTAAAACATAAAGTTGC+AGG + chr4_1:1215574-1215593 None:intergenic 20.0%
!!! TTTTAGATACATGGATAATT+CGG - chr4_1:1216207-1216226 Msa0528410:intron 20.0%
!! CAAAATTGTTAAAATTGGAT+CGG + chr4_1:1216327-1216346 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr4_1:1216645-1216664 Msa0528410:intron 20.0%
!!! TTAAAATGCCTCAATTTTAT+AGG - chr4_1:1216831-1216850 Msa0528410:intron 20.0%
!!! TAAAATGCCTCAATTTTATA+GGG - chr4_1:1216832-1216851 Msa0528410:intron 20.0%
!!! TTTTTTTTCGTTAGCAAAAT+AGG + chr4_1:1216951-1216970 None:intergenic 20.0%
!!! ATTAGGGTTAATTATGTTTT+AGG + chr4_1:1217071-1217090 None:intergenic 20.0%
!!! TTTGTAGCTTTTTTTCTTAT+AGG + chr4_1:1217439-1217458 None:intergenic 20.0%
!! TTATACCAAAAATTGATCTT+GGG + chr4_1:1217501-1217520 None:intergenic 20.0%
!! TTTATACCAAAAATTGATCT+TGG + chr4_1:1217502-1217521 None:intergenic 20.0%
!! AAAACATCATAATTTGATTG+AGG + chr4_1:1217862-1217881 None:intergenic 20.0%
!! TGAGAATATAATCAATGAAA+TGG + chr4_1:1218037-1218056 None:intergenic 20.0%
!!! GTGAAATAGTTCAATTTTTT+TGG - chr4_1:1218386-1218405 Msa0528410:intron 20.0%
!!! GTTTAGATTTTCTATGAATT+TGG + chr4_1:1218680-1218699 None:intergenic 20.0%
!! TATGTTTACACTTAATTATG+TGG - chr4_1:1218822-1218841 Msa0528410:intron 20.0%
!!! TTAATACCATGGTTTTATTT+TGG + chr4_1:1219071-1219090 None:intergenic 20.0%
!! CTCTAATAATGTTATATTGT+TGG + chr4_1:1219336-1219355 None:intergenic 20.0%
!! CAACAATATAACATTATTAG+AGG - chr4_1:1219334-1219353 Msa0528410:intron 20.0%
!!! TAGAGGAAAATTTGTTTATA+AGG - chr4_1:1219351-1219370 Msa0528410:intron 20.0%
!! ATAAAGATAATATGGCATTT+AGG + chr4_1:1219414-1219433 None:intergenic 20.0%
!!! TAATACAAATTTTTGGAACA+GGG + chr4_1:1219459-1219478 None:intergenic 20.0%
!!! TTAATACAAATTTTTGGAAC+AGG + chr4_1:1219460-1219479 None:intergenic 20.0%
!! TCAAAAAAGAAAGTTTATCT+TGG + chr4_1:1219604-1219623 None:intergenic 20.0%
!! ATATATATAGTGCAAAACTT+GGG + chr4_1:1219845-1219864 None:intergenic 20.0%
!! AATATATATAGTGCAAAACT+TGG + chr4_1:1219846-1219865 None:intergenic 20.0%
!! TTTGCACTATATATATTGTA+TGG - chr4_1:1219849-1219868 Msa0528410:intron 20.0%
!! TTTAATGTGTCATCATTATT+GGG + chr4_1:1220266-1220285 None:intergenic 20.0%
!!! TTTTAATGTGTCATCATTAT+TGG + chr4_1:1220267-1220286 None:intergenic 20.0%
! TTTCAACTTTATCTCGTATA+TGG + chr4_1:1214719-1214738 None:intergenic 25.0%
!! TGAGGTGATAATAAACTTTT+AGG - chr4_1:1215081-1215100 Msa0528410:intron 25.0%
!! ATTTTGTATTGCAACTTTTG+GGG - chr4_1:1215273-1215292 Msa0528410:intron 25.0%
! TTGCAATTTATTTGCATTCA+TGG - chr4_1:1215500-1215519 Msa0528410:intron 25.0%
!! GACAACTTCTTTCTTATTTA+AGG - chr4_1:1215530-1215549 Msa0528410:intron 25.0%
!! CCATGTATCTAAAACTATAA+CGG + chr4_1:1216201-1216220 None:intergenic 25.0%
! TGTTTATTCATTTGAGTGAA+TGG - chr4_1:1216363-1216382 Msa0528410:intron 25.0%
! AGTACAAAAAATAAAGGACA+AGG - chr4_1:1216396-1216415 Msa0528410:intron 25.0%
!! TTTTAGTCCCTATAAAATTG+AGG + chr4_1:1216842-1216861 None:intergenic 25.0%
! TTGCTAACGAAAAAAAACAT+CGG - chr4_1:1216954-1216973 Msa0528410:CDS 25.0%
! AATAAAACGCGTCTATTTAT+AGG - chr4_1:1217043-1217062 Msa0528410:CDS 25.0%
! ATAAAACGCGTCTATTTATA+GGG - chr4_1:1217044-1217063 Msa0528410:CDS 25.0%
! TGGTATAAAATAATAACACG+TGG - chr4_1:1217513-1217532 Msa0528410:intron 25.0%
!!! ATGATGTTTTTGTAAGCTTT+AGG - chr4_1:1217872-1217891 Msa0528410:intron 25.0%
!!! TGATGTTTTTGTAAGCTTTA+GGG - chr4_1:1217873-1217892 Msa0528410:intron 25.0%
! ACATGCACTAAAAATGATTT+AGG + chr4_1:1218555-1218574 None:intergenic 25.0%
!!! TTTTTAGTGCATGTTTGAAT+CGG - chr4_1:1218561-1218580 Msa0528410:intron 25.0%
!! CAATTGATATGTTTCTACAT+TGG - chr4_1:1218703-1218722 Msa0528410:intron 25.0%
! TTAAGTGTAAACATATGTGT+TGG + chr4_1:1218817-1218836 None:intergenic 25.0%
! AAAATTGTGAAAACTAGTAG+TGG + chr4_1:1218923-1218942 None:intergenic 25.0%
! TGAAATATATAGATCAACTG+AGG - chr4_1:1218960-1218979 Msa0528410:intron 25.0%
! AAAACACCAAAATAAAACCA+TGG - chr4_1:1219062-1219081 Msa0528410:intron 25.0%
!! AATTGCTATTCTTAATACCA+TGG + chr4_1:1219082-1219101 None:intergenic 25.0%
!!! GTCTTATTTACTATAAAGCA+TGG - chr4_1:1219223-1219242 Msa0528410:intron 25.0%
!! TACATCATTTGAGCATTTTA+AGG + chr4_1:1219252-1219271 None:intergenic 25.0%
! CAAGAACTCGTAATAAAATA+TGG - chr4_1:1219769-1219788 Msa0528410:intron 25.0%
!!! TGGTTTTTTATCTGTAATAG+TGG - chr4_1:1219789-1219808 Msa0528410:intron 25.0%
! AAACTTGGGCATTTATTATA+TGG + chr4_1:1219831-1219850 None:intergenic 25.0%
! AACAAATAGATTTCAAGCTT+TGG + chr4_1:1219895-1219914 None:intergenic 25.0%
! AGAATTGAATTGTAATGCAA+AGG - chr4_1:1220181-1220200 Msa0528410:intron 25.0%
! GAATTGAATTGTAATGCAAA+GGG - chr4_1:1220182-1220201 Msa0528410:intron 25.0%
!!! AGCTAATGTTTTTGTTGATT+GGG + chr4_1:1220225-1220244 None:intergenic 25.0%
TAGTATTTGTATACGAGTTC+AGG - chr4_1:1214658-1214677 Msa0528410:CDS 30.0%
! TCTTGCAAACAAAGCATTTA+AGG - chr4_1:1214745-1214764 Msa0528410:CDS 30.0%
ATTAATAGAAGCAGAATCAG+AGG + chr4_1:1215135-1215154 None:intergenic 30.0%
AAGACTCCTATAACATGAAT+TGG - chr4_1:1215203-1215222 Msa0528410:intron 30.0%
ACTAACATAGTCTACATTCA+GGG - chr4_1:1215471-1215490 Msa0528410:intron 30.0%
!! TTTATTTTCAAACCCAGTCT+TGG - chr4_1:1215598-1215617 Msa0528410:intron 30.0%
TTAAAGTGTAAACCAAGACT+GGG + chr4_1:1215613-1215632 None:intergenic 30.0%
! TTTAAAGTGTAAACCAAGAC+TGG + chr4_1:1215614-1215633 None:intergenic 30.0%
!! TTTATTTTCAAACCCAGTCT+TGG - chr4_1:1215598-1215617 Msa0528410:intron 30.0%
TTAAAGTGTAAACCAAGACT+GGG + chr4_1:1215613-1215632 None:intergenic 30.0%
! TTTAAAGTGTAAACCAAGAC+TGG + chr4_1:1215614-1215633 None:intergenic 30.0%
!!! CCGTTATAGTTTTAGATACA+TGG - chr4_1:1216198-1216217 Msa0528410:intron 30.0%
TGTAGACATTGTATTAACCT+TGG - chr4_1:1216249-1216268 Msa0528410:intron 30.0%
GTAGACATTGTATTAACCTT+GGG - chr4_1:1216250-1216269 Msa0528410:intron 30.0%
! TGCATTTCTGTTTCTTAGAA+AGG - chr4_1:1216513-1216532 Msa0528410:intron 30.0%
!! GAGTGCATAGTATTTTTGTA+AGG - chr4_1:1216772-1216791 Msa0528410:intron 30.0%
!!! CACATCTGACTTTTTTTGTT+GGG + chr4_1:1216875-1216894 None:intergenic 30.0%
TGCTAACGAAAAAAAACATC+GGG - chr4_1:1216955-1216974 Msa0528410:CDS 30.0%
!!! AAACGCGCCTATTTTTTTTT+TGG - chr4_1:1217019-1217038 Msa0528410:CDS 30.0%
! GAGAACAAAATCGTAACTTT+TGG - chr4_1:1217650-1217669 Msa0528410:intron 30.0%
!! TCGTAACTTTTGGAAAGTTA+TGG - chr4_1:1217660-1217679 Msa0528410:intron 30.0%
!! CGTAACTTTTGGAAAGTTAT+GGG - chr4_1:1217661-1217680 Msa0528410:intron 30.0%
!! GTAACTTTTGGAAAGTTATG+GGG - chr4_1:1217662-1217681 Msa0528410:intron 30.0%
!! GATGTTTTTGTAAGCTTTAG+GGG - chr4_1:1217874-1217893 Msa0528410:intron 30.0%
AAAACTATGCTTCTTCACAT+TGG - chr4_1:1218058-1218077 Msa0528410:intron 30.0%
TGAGTGTCTTTGTTAAGTAT+TGG - chr4_1:1218252-1218271 Msa0528410:intron 30.0%
ATGACTCACTTATAATGAGA+CGG - chr4_1:1218433-1218452 Msa0528410:intron 30.0%
!! GGCAGGAATGTATTTTAAAT+TGG + chr4_1:1218534-1218553 None:intergenic 30.0%
TCAAAGTTCCAACAAAATTG+TGG - chr4_1:1218637-1218656 Msa0528410:intron 30.0%
TATAAAACACCGACATTCTT+CGG - chr4_1:1218739-1218758 Msa0528410:intron 30.0%
! TGAACTGACATTGTACTTTT+CGG + chr4_1:1219025-1219044 None:intergenic 30.0%
!! GTTTTTAACTAGTGTCCTAA+GGG + chr4_1:1219504-1219523 None:intergenic 30.0%
!! AGTTTTTAACTAGTGTCCTA+AGG + chr4_1:1219505-1219524 None:intergenic 30.0%
!!! TTTTATCTGTAATAGTGGAC+CGG - chr4_1:1219794-1219813 Msa0528410:intron 30.0%
TTATATGGAGTATACTTCTC+CGG + chr4_1:1219816-1219835 None:intergenic 30.0%
! TGGCTGATTAATTTGAACAA+CGG + chr4_1:1219875-1219894 None:intergenic 30.0%
TGACATTTGTGAATGTGTAT+GGG + chr4_1:1219932-1219951 None:intergenic 30.0%
ATGACATTTGTGAATGTGTA+TGG + chr4_1:1219933-1219952 None:intergenic 30.0%
TTTGTAGACATAGATTGTTG+CGG + chr4_1:1220058-1220077 None:intergenic 30.0%
ATGCACTAAAATCTTGCTAA+GGG + chr4_1:1220114-1220133 None:intergenic 30.0%
AATGCACTAAAATCTTGCTA+AGG + chr4_1:1220115-1220134 None:intergenic 30.0%
!! AATAGCTGGAAGTATTAGAT+GGG - chr4_1:1220142-1220161 Msa0528410:intron 30.0%
!! GAGCTAATGTTTTTGTTGAT+TGG + chr4_1:1220226-1220245 None:intergenic 30.0%
ACAAAAACATTAGCTCAACT+TGG - chr4_1:1220230-1220249 Msa0528410:intron 30.0%
! GGTTGAGTGTAATCAATTTT+AGG + chr4_1:1220302-1220321 None:intergenic 30.0%
!! AGTTCAGGCTTTAAACTGTA+AGG - chr4_1:1214673-1214692 Msa0528410:CDS 35.0%
TTTCTTTCCAAACTCAGTCT+CGG - chr4_1:1214845-1214864 Msa0528410:CDS 35.0%
CGGTTCATCATCACTAAAAA+TGG + chr4_1:1214959-1214978 None:intergenic 35.0%
! TTTAGTGATGATGAACCGTT+TGG - chr4_1:1214961-1214980 Msa0528410:intron 35.0%
! TTAGTGATGATGAACCGTTT+GGG - chr4_1:1214962-1214981 Msa0528410:intron 35.0%
TTTATTATCACCTCATCCTC+AGG + chr4_1:1215076-1215095 None:intergenic 35.0%
CGTGTACCAATTCATGTTAT+AGG + chr4_1:1215212-1215231 None:intergenic 35.0%
! TAGTCACTTTAGTTCCTGAT+TGG - chr4_1:1215299-1215318 Msa0528410:intron 35.0%
! AGTCACTTTAGTTCCTGATT+GGG - chr4_1:1215300-1215319 Msa0528410:intron 35.0%
! GATTACTCTTTTTCCCAATC+AGG + chr4_1:1215316-1215335 None:intergenic 35.0%
AAGAGTAATCACTTTAGTCC+CGG - chr4_1:1215326-1215345 Msa0528410:intron 35.0%
TTTGCAATTTCTCAGCATTC+CGG + chr4_1:1215348-1215367 None:intergenic 35.0%
ATTAACGAAGTCTGCATTCA+GGG - chr4_1:1215439-1215458 Msa0528410:intron 35.0%
GACTAACATAGTCTACATTC+AGG - chr4_1:1215470-1215489 Msa0528410:intron 35.0%
TGTCGTATTAATGCGATGTT+TGG - chr4_1:1216061-1216080 Msa0528410:intron 35.0%
!!! GTTTGGTTTGTTCGTCATTT+TGG - chr4_1:1216078-1216097 Msa0528410:intron 35.0%
!! ATCGGAGTTAAAAAAGTGTC+AGG + chr4_1:1216309-1216328 None:intergenic 35.0%
CAAAAAATAAAGGACAAGGC+TGG - chr4_1:1216400-1216419 Msa0528410:intron 35.0%
!!! CCACATCTGACTTTTTTTGT+TGG + chr4_1:1216876-1216895 None:intergenic 35.0%
CCAACAAAAAAAGTCAGATG+TGG - chr4_1:1216873-1216892 Msa0528410:intron 35.0%
! ATTGTTGCTGATTGAGCAAA+CGG + chr4_1:1216916-1216935 None:intergenic 35.0%
GCTACAGTTGCAAAACTTAT+GGG + chr4_1:1217467-1217486 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+TGG + chr4_1:1217468-1217487 None:intergenic 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG - chr4_1:1217472-1217491 Msa0528410:intron 35.0%
TACCAAAAATTGATCTTGGG+AGG + chr4_1:1217498-1217517 None:intergenic 35.0%
AGCGTAGATCTAGTCAAAAT+TGG - chr4_1:1217559-1217578 Msa0528410:intron 35.0%
! GATCTAGTCAAAATTGGTCT+TGG - chr4_1:1217565-1217584 Msa0528410:intron 35.0%
! TTTTGCATCTGTAGCAGTTT+TGG + chr4_1:1217594-1217613 None:intergenic 35.0%
TGCTACAGATGCAAAACTTA+GGG - chr4_1:1217598-1217617 Msa0528410:intron 35.0%
!! TCGATTGCTTTAAGAAGTGA+AGG + chr4_1:1218006-1218025 None:intergenic 35.0%
TCACTTCTTAAAGCAATCGA+AGG - chr4_1:1218006-1218025 Msa0528410:intron 35.0%
TGGCGAAAGTAGTATTAGTT+AGG - chr4_1:1218324-1218343 Msa0528410:intron 35.0%
GCACTAAAAATGATTTAGGC+AGG + chr4_1:1218551-1218570 None:intergenic 35.0%
! TTGTAGCACCACAATTTTGT+TGG + chr4_1:1218648-1218667 None:intergenic 35.0%
!! TGTCGGTGTTTTATAGGTAT+GGG + chr4_1:1218734-1218753 None:intergenic 35.0%
!! ATGTCGGTGTTTTATAGGTA+TGG + chr4_1:1218735-1218754 None:intergenic 35.0%
!! GAAGAATGTCGGTGTTTTAT+AGG + chr4_1:1218740-1218759 None:intergenic 35.0%
TCTTCGGATTAAGCGTATTT+CGG - chr4_1:1218755-1218774 Msa0528410:intron 35.0%
TAGTAGTGGTCTATGAAACA+CGG + chr4_1:1218909-1218928 None:intergenic 35.0%
! TATCTTTTGCACAACTTGTG+CGG + chr4_1:1218995-1219014 None:intergenic 35.0%
! AACTGACATTGTACTTTTCG+GGG + chr4_1:1219023-1219042 None:intergenic 35.0%
! GAACTGACATTGTACTTTTC+GGG + chr4_1:1219024-1219043 None:intergenic 35.0%
! ATGGCATTTAGGAGAGATTT+TGG + chr4_1:1219403-1219422 None:intergenic 35.0%
! CTTTTTAACAAGTGCCCTAA+GGG - chr4_1:1219625-1219644 Msa0528410:intron 35.0%
TATGGTGTAAGAAGCTGTTA+TGG + chr4_1:1219962-1219981 None:intergenic 35.0%
GATAAGATCAAAGGAGAGTT+TGG + chr4_1:1220003-1220022 None:intergenic 35.0%
TCACTATCGGATAAGATCAA+AGG + chr4_1:1220012-1220031 None:intergenic 35.0%
CATCTAATACTTCCAGCTAT+TGG + chr4_1:1220143-1220162 None:intergenic 35.0%
!! CAATAGCTGGAAGTATTAGA+TGG - chr4_1:1220141-1220160 Msa0528410:intron 35.0%
AATTGATTACACTCAACCCT+TGG - chr4_1:1220304-1220323 Msa0528410:five_prime_UTR 35.0%
ATGTAAACCGAGACTGAGTT+TGG + chr4_1:1214855-1214874 None:intergenic 40.0%
TCAGTCTCGGTTTACATTGA+GGG - chr4_1:1214858-1214877 Msa0528410:CDS 40.0%
TTGCAATTTCTCAGCATTCC+GGG + chr4_1:1215347-1215366 None:intergenic 40.0%
ACCAACAGAGTCTACATTCA+GGG + chr4_1:1215376-1215395 None:intergenic 40.0%
AGACTCTGTTGGTCAATTTC+AGG - chr4_1:1215383-1215402 Msa0528410:intron 40.0%
GACTCTGTTGGTCAATTTCA+GGG - chr4_1:1215384-1215403 Msa0528410:intron 40.0%
TGGTCAATTTCAGGGACTAA+CGG - chr4_1:1215392-1215411 Msa0528410:intron 40.0%
ACTAACGGAGTCTACATTCA+GGG - chr4_1:1215407-1215426 Msa0528410:intron 40.0%
GATTAACGAAGTCTGCATTC+AGG - chr4_1:1215438-1215457 Msa0528410:intron 40.0%
!! TTGTTTTGTCTGTCTCGTTG+CGG - chr4_1:1216111-1216130 Msa0528410:intron 40.0%
CAGCACAAAATCAAAGGACA+AGG - chr4_1:1216423-1216442 Msa0528410:intron 40.0%
ACAAAATCAAAGGACAAGGC+TGG - chr4_1:1216427-1216446 Msa0528410:intron 40.0%
ATCAGCAACAATTAACAGCG+AGG - chr4_1:1216924-1216943 Msa0528410:CDS 40.0%
TCGCAACTTCGTGAAAGTTA+GGG + chr4_1:1217410-1217429 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG + chr4_1:1217411-1217430 None:intergenic 40.0%
!! CTAGTCAAAATTGGTCTTGG+AGG - chr4_1:1217568-1217587 Msa0528410:intron 40.0%
CTGCTACAGATGCAAAACTT+AGG - chr4_1:1217597-1217616 Msa0528410:intron 40.0%
GCTACAGATGCAAAACTTAG+GGG - chr4_1:1217599-1217618 Msa0528410:intron 40.0%
CTACAGATGCAAAACTTAGG+GGG - chr4_1:1217600-1217619 Msa0528410:intron 40.0%
CTTTCATAGCCATTTGGTTG+AGG - chr4_1:1217915-1217934 Msa0528410:intron 40.0%
GAGAAAAAGCCTCAACCAAA+TGG + chr4_1:1217927-1217946 None:intergenic 40.0%
! GTTGATGAGAAACTTGAGAC+AGG - chr4_1:1217967-1217986 Msa0528410:intron 40.0%
ACTCACTTATAATGAGACGG+AGG - chr4_1:1218436-1218455 Msa0528410:intron 40.0%
CTCACTTATAATGAGACGGA+GGG - chr4_1:1218437-1218456 Msa0528410:intron 40.0%
TTAGTGCATGTTTGAATCGG+TGG - chr4_1:1218564-1218583 Msa0528410:intron 40.0%
AAAACCACAATAGCTCACTG+AGG + chr4_1:1218603-1218622 None:intergenic 40.0%
ACGCTTAATCCGAAGAATGT+CGG + chr4_1:1218751-1218770 None:intergenic 40.0%
! GATTAAGCGTATTTCGGTGT+CGG - chr4_1:1218761-1218780 Msa0528410:intron 40.0%
TGAAACACGGGTATAGACAT+CGG + chr4_1:1218896-1218915 None:intergenic 40.0%
AGTAGTGGTCTATGAAACAC+GGG + chr4_1:1218908-1218927 None:intergenic 40.0%
! ATCTTTTGCACAACTTGTGC+GGG + chr4_1:1218994-1219013 None:intergenic 40.0%
! ACTGACATTGTACTTTTCGG+GGG + chr4_1:1219022-1219041 None:intergenic 40.0%
AGAACCAAGGATGAGACAAA+TGG + chr4_1:1219168-1219187 None:intergenic 40.0%
AATAAGACACATCGTCACCT+TGG + chr4_1:1219211-1219230 None:intergenic 40.0%
TTATGCTAACAAGTGCCCTT+AGG - chr4_1:1219486-1219505 Msa0528410:intron 40.0%
! GCTTTTTAACAAGTGCCCTA+AGG - chr4_1:1219624-1219643 Msa0528410:intron 40.0%
AGTAGGCTCATTGGGAATTA+TGG + chr4_1:1219980-1219999 None:intergenic 40.0%
! ATCAAAGGAGAGTTTGGAGT+AGG + chr4_1:1219997-1220016 None:intergenic 40.0%
AGACATAGATTGTTGCGGAA+TGG + chr4_1:1220053-1220072 None:intergenic 40.0%
GTGCATTACTATCCAATAGC+TGG - chr4_1:1220128-1220147 Msa0528410:intron 40.0%
TGTCATCATTATTGGGAGCT+AGG + chr4_1:1220259-1220278 None:intergenic 40.0%
CAACAAAGGGATTTCTCCAA+GGG + chr4_1:1220323-1220342 None:intergenic 40.0%
TCAACAAAGGGATTTCTCCA+AGG + chr4_1:1220324-1220343 None:intergenic 40.0%
CTCAGTCTCGGTTTACATTG+AGG - chr4_1:1214857-1214876 Msa0528410:CDS 45.0%
! TGATGATGAACCGTTTGGGA+TGG - chr4_1:1214966-1214985 Msa0528410:intron 45.0%
GAGCAATGATCCATCCCAAA+CGG + chr4_1:1214979-1214998 None:intergenic 45.0%
GGATGGATCATTGCTCTCTT+GGG - chr4_1:1214983-1215002 Msa0528410:intron 45.0%
CATCACGACTTCTTTGGACA+CGG + chr4_1:1215039-1215058 None:intergenic 45.0%
TGTCCAAAGAAGTCGTGATG+AGG - chr4_1:1215039-1215058 Msa0528410:intron 45.0%
CAAAGAAGTCGTGATGAGGA+GGG - chr4_1:1215043-1215062 Msa0528410:intron 45.0%
TCCCTGAATGTAGACTCTGT+TGG - chr4_1:1215372-1215391 Msa0528410:intron 45.0%
GACCAACAGAGTCTACATTC+AGG + chr4_1:1215377-1215396 None:intergenic 45.0%
GACTAACGGAGTCTACATTC+AGG - chr4_1:1215406-1215425 Msa0528410:intron 45.0%
!! AAAAGTGTCAGGAACACCCA+GGG + chr4_1:1216298-1216317 None:intergenic 45.0%
!! AAAAAGTGTCAGGAACACCC+AGG + chr4_1:1216299-1216318 None:intergenic 45.0%
GCAACTTCGTGAAAGTTAGG+GGG + chr4_1:1217408-1217427 None:intergenic 45.0%
CGCAACTTCGTGAAAGTTAG+GGG + chr4_1:1217409-1217428 None:intergenic 45.0%
! GGCCTCCCAAGATCAATTTT+TGG - chr4_1:1217493-1217512 Msa0528410:intron 45.0%
AGATGCAAAACTTAGGGGGT+GGG - chr4_1:1217604-1217623 Msa0528410:intron 45.0%
!!! TTTTGTAAGCTTTAGGGGCG+TGG - chr4_1:1217879-1217898 Msa0528410:intron 45.0%
AATGGCTATGAAAGCCGTGA+CGG + chr4_1:1217909-1217928 None:intergenic 45.0%
TCACGGCTTTCATAGCCATT+TGG - chr4_1:1217909-1217928 Msa0528410:intron 45.0%
ACTACAGTTAACTGCCGTTG+AGG - chr4_1:1218489-1218508 Msa0528410:intron 45.0%
ACCGCATTCAATGACCTCAA+CGG + chr4_1:1218506-1218525 None:intergenic 45.0%
TGTTTGAATCGGTGGAGAGA+TGG - chr4_1:1218572-1218591 Msa0528410:intron 45.0%
!! CATATGTGTTGGTGTCGTGT+CGG + chr4_1:1218806-1218825 None:intergenic 45.0%
ACCAAGGATGAGACAAATGG+TGG + chr4_1:1219165-1219184 None:intergenic 45.0%
! GAGTTTGGAGTAGGCTCATT+GGG + chr4_1:1219988-1220007 None:intergenic 45.0%
! AGAGTTTGGAGTAGGCTCAT+TGG + chr4_1:1219989-1220008 None:intergenic 45.0%
ACGCGCTAGTTGATCACTAT+CGG + chr4_1:1220025-1220044 None:intergenic 45.0%
ATAGTGATCAACTAGCGCGT+TGG - chr4_1:1220025-1220044 Msa0528410:exon 45.0%
!! GGAAGTATTAGATGGGCAGA+AGG - chr4_1:1220149-1220168 Msa0528410:intron 45.0%
AGTATTAGATGGGCAGAAGG+TGG - chr4_1:1220152-1220171 Msa0528410:intron 45.0%
!!! TGAATTTTTTTTTTTTTTAA+AGG + chr4_1:1215830-1215849 None:intergenic 5.0%
!!! AATGTTTAAAATAATTTTTT+AGG - chr4_1:1215874-1215893 Msa0528410:intron 5.0%
!!! CTTAAATTTTATTAAATTTT+TGG + chr4_1:1216983-1217002 None:intergenic 5.0%
!! AAATTTAATAAAATTTAAGT+AGG - chr4_1:1216984-1217003 Msa0528410:CDS 5.0%
!! AATTTAATAAAATTTAAGTA+GGG - chr4_1:1216985-1217004 Msa0528410:CDS 5.0%
!!! TAATACTTTTTTTTTTTTTT+TGG - chr4_1:1217790-1217809 Msa0528410:intron 5.0%
!!! TTTTGTTATATTTATTATAT+GGG + chr4_1:1219291-1219310 None:intergenic 5.0%
!!! TTTTTGTTATATTTATTATA+TGG + chr4_1:1219292-1219311 None:intergenic 5.0%
GGGATGGATCATTGCTCTCT+TGG - chr4_1:1214982-1215001 Msa0528410:intron 50.0%
CCTCCTCATCACGACTTCTT+TGG + chr4_1:1215045-1215064 None:intergenic 50.0%
CCAAAGAAGTCGTGATGAGG+AGG - chr4_1:1215042-1215061 Msa0528410:intron 50.0%
CTGTAAGGGCAAAATGCCCA+AGG + chr4_1:1216269-1216288 None:intergenic 50.0%
ACCCAGGGGTCTTTCTGTAA+GGG + chr4_1:1216283-1216302 None:intergenic 50.0%
! AAAGTGTCAGGAACACCCAG+GGG + chr4_1:1216297-1216316 None:intergenic 50.0%
GGCTGGCAGCACAAAATCAA+AGG - chr4_1:1216417-1216436 Msa0528410:intron 50.0%
TAACACGTGGCACCTCAGTT+AGG - chr4_1:1217526-1217545 Msa0528410:intron 50.0%
TGACTAGATCTACGCTGACG+TGG + chr4_1:1217555-1217574 None:intergenic 50.0%
CAGATGCAAAACTTAGGGGG+TGG - chr4_1:1217603-1217622 Msa0528410:intron 50.0%
GCCGTTGAGGTCATTGAATG+CGG - chr4_1:1218502-1218521 Msa0528410:intron 50.0%
TTGAATCGGTGGAGAGATGG+TGG - chr4_1:1218575-1218594 Msa0528410:intron 50.0%
GGAACCTCAGTGAGCTATTG+TGG - chr4_1:1218596-1218615 Msa0528410:intron 50.0%
!! TGTTGGTGTCGTGTCGGTTT+CGG + chr4_1:1218800-1218819 None:intergenic 50.0%
GCCACCATTTGTCTCATCCT+TGG - chr4_1:1219161-1219180 Msa0528410:intron 50.0%
AAGACACATCGTCACCTTGG+AGG + chr4_1:1219208-1219227 None:intergenic 50.0%
GAAATCCCACAACCAGTGAG+AGG - chr4_1:1220078-1220097 Msa0528410:intron 50.0%
! CTCATCCTCTCACTGGTTGT+GGG + chr4_1:1220086-1220105 None:intergenic 50.0%
! TCTCATCCTCTCACTGGTTG+TGG + chr4_1:1220087-1220106 None:intergenic 50.0%
GGATTCTCTCATCCTCTCAC+TGG + chr4_1:1220093-1220112 None:intergenic 50.0%
!! TGAGGAGGGTACTACTCCTG+AGG - chr4_1:1215057-1215076 Msa0528410:intron 55.0%
GGGTACTACTCCTGAGGATG+AGG - chr4_1:1215063-1215082 Msa0528410:intron 55.0%
TGCCCTTACAGAAAGACCCC+TGG - chr4_1:1216278-1216297 Msa0528410:intron 55.0%
GCCCTTACAGAAAGACCCCT+GGG - chr4_1:1216279-1216298 Msa0528410:intron 55.0%
CACCCAGGGGTCTTTCTGTA+AGG + chr4_1:1216284-1216303 None:intergenic 55.0%
CTGACGTGGCATCCTAACTG+AGG + chr4_1:1217541-1217560 None:intergenic 55.0%
CACCTTGGAGGAAGTCCATG+CGG + chr4_1:1219196-1219215 None:intergenic 55.0%
! CCATGCGGTGCTGAGAACCA+AGG + chr4_1:1219181-1219200 None:intergenic 60.0%
! CCTTGGTTCTCAGCACCGCA+TGG - chr4_1:1219178-1219197 Msa0528410:intron 60.0%
CACCGCATGGACTTCCTCCA+AGG - chr4_1:1219191-1219210 Msa0528410:intron 60.0%
! AGGGGCGTGGACATCCGTCA+CGG - chr4_1:1217892-1217911 Msa0528410:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 1214654 1220343 1214654 ID=Msa0528410;Name=Msa0528410
chr4_1 mRNA 1214654 1220343 1214654 ID=Msa0528410-mRNA-1;Parent=Msa0528410;Name=Msa0528410-mRNA-1;_AED=0.30;_eAED=0.34;_QI=130|0.66|0.5|1|0.66|0.5|4|0|236
chr4_1 exon 1214654 1214957 1214654 ID=Msa0528410-mRNA-1:exon:360;Parent=Msa0528410-mRNA-1
chr4_1 exon 1216888 1217177 1216888 ID=Msa0528410-mRNA-1:exon:359;Parent=Msa0528410-mRNA-1
chr4_1 exon 1219913 1220046 1219913 ID=Msa0528410-mRNA-1:exon:358;Parent=Msa0528410-mRNA-1
chr4_1 exon 1220231 1220343 1220231 ID=Msa0528410-mRNA-1:exon:357;Parent=Msa0528410-mRNA-1
chr4_1 five_prime_UTR 1220231 1220343 1220231 ID=Msa0528410-mRNA-1:five_prime_utr;Parent=Msa0528410-mRNA-1
chr4_1 five_prime_UTR 1220030 1220046 1220030 ID=Msa0528410-mRNA-1:five_prime_utr;Parent=Msa0528410-mRNA-1
chr4_1 CDS 1219913 1220029 1219913 ID=Msa0528410-mRNA-1:cds;Parent=Msa0528410-mRNA-1
chr4_1 CDS 1216888 1217177 1216888 ID=Msa0528410-mRNA-1:cds;Parent=Msa0528410-mRNA-1
chr4_1 CDS 1214654 1214957 1214654 ID=Msa0528410-mRNA-1:cds;Parent=Msa0528410-mRNA-1
Gene Sequence

>Msa0528410

ATGATGAACCGTTTGGGATGGATCATTGCTCTCTTGGGTCTCTTCAAAGTTACTGCTTCATTACTGCACCGTGTCCAAAGAAGTCGTGATGAGGAGGGTACTACTCCTGAGGATGAGTTGAAGAGTGTAGCAGAAAAGACAATGTCAAACAGTACTCCTCAATCAAATTATGATGTTTTTGTAAGCTTTAGGGGCGTGGACATCCGTCACGGCTTTCATAGCCATTTGGTTGAGGCTTTTTCTCAAAAGAAAATACATGCTTTTGTTGATGAGAAACTTGAGACAGGAGATGAAATAGAACCTTCACTTCTTAAAGCAATCGAAGGATCATCCATTTCATTGATTATATTCTCAGAAAACTATGCTTCTTCACATTGGTGTTTAGATGAGCTTGTGAAAATAATTGACGCGTTGGAGCCATTCCGCAACAATCTATGTCTACAAAGAAATCCCACAACCAGTGAGAGGATGAGAGAATCCCTTAGCAAGATTTTAGTGCATTACTATCCAATAGCTGGAAGTATTAGATGGGCAGAAGGTGGTCGTGTAGAATTGAATTGTAATGCAAAGGGAGTGATGTTTATTGAAGCCCAATCAACAAAAACATTAGCTCAACTTGGAGACCTAGCTCCCAATAATGATGACACATTAAAATATGAGTTTGTTCCTAAAATTGATTACACTCAACCCTTGGAGAAATCCCTTTGTTGA
Protein sequence

>Msa0528410

MMNRLGWIIALLGLFKVTASLLHRVQRSRDEEGTTPEDELKSVAEKTMSNSTPQSNYDVFVSFRGVDIRHGFHSHLVEAFSQKKIHAFVDEKLETGDEIEPSLLKAIEGSSISLIIFSENYASSHWCLDELVKIIDALEPFRNNLCLQRNPTTSERMRESLSKILVHYYPIAGSIRWAEGGRVELNCNAKGVMFIEAQSTKTLAQLGDLAPNNDDTLKYEFVPKIDYTQPLEKSLC*