AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0870630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870630 MtrunA17_Chr6g0452181 97.333 225 3 1 1 222 138 362 7.46e-163 457
Msa0870630 MtrunA17_Chr8g0355021 47.768 224 109 3 3 222 204 423 6.45e-67 213
Msa0870630 MtrunA17_Chr1g0185281 50.000 206 94 4 21 222 283 483 5.12e-63 205
Msa0870630 MtrunA17_Chr5g0394901 49.524 210 97 4 17 222 345 549 3.90e-62 204
Msa0870630 MtrunA17_Chr1g0205121 48.165 218 96 5 17 222 298 510 3.25e-61 201
Msa0870630 MtrunA17_Chr7g0260081 50.246 203 92 4 24 222 286 483 2.24e-60 198
Msa0870630 MtrunA17_Chr8g0382571 49.510 204 94 4 23 222 210 408 9.89e-60 194
Msa0870630 MtrunA17_Chr4g0054941 48.241 199 97 4 25 222 309 502 3.53e-57 190
Msa0870630 MtrunA17_Chr5g0400311 44.954 218 112 6 6 222 349 559 4.34e-57 191
Msa0870630 MtrunA17_Chr4g0054951 47.087 206 103 4 18 222 302 502 6.04e-57 189
Msa0870630 MtrunA17_Chr8g0375751 44.186 215 115 4 9 222 130 340 2.98e-56 184
Msa0870630 MtrunA17_Chr1g0165011 47.291 203 94 5 26 222 177 372 4.13e-56 184
Msa0870630 MtrunA17_Chr7g0263111 48.500 200 93 4 23 222 168 357 2.29e-55 182
Msa0870630 MtrunA17_Chr1g0201271 48.259 201 95 6 23 222 368 560 4.74e-53 180
Msa0870630 MtrunA17_Chr6g0466801 47.264 201 97 5 23 222 366 558 1.08e-52 179
Msa0870630 MtrunA17_Chr6g0479511 40.594 202 115 4 22 222 148 345 1.93e-52 173
Msa0870630 MtrunA17_Chr1g0189231 30.631 222 122 5 24 222 606 818 2.30e-24 100
Msa0870630 MtrunA17_Chr1g0154491 33.333 162 90 8 63 222 144 289 1.85e-14 71.2
Msa0870630 MtrunA17_Chr6g0488541 39.560 91 49 3 133 222 807 892 1.32e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870630 AT3G63240.2 51.442 208 90 5 20 222 272 473 8.11e-64 207
Msa0870630 AT3G63240.1 51.442 208 90 5 20 222 272 473 8.11e-64 207
Msa0870630 AT2G32010.2 50.732 205 92 4 22 222 322 521 2.00e-63 207
Msa0870630 AT2G32010.1 50.732 205 92 4 22 222 322 521 2.00e-63 207
Msa0870630 AT2G32010.4 50.732 205 92 4 22 222 322 521 2.00e-63 207
Msa0870630 AT2G32010.3 50.732 205 92 4 22 222 322 521 2.00e-63 207
Msa0870630 AT5G65090.2 50.746 201 90 4 26 222 199 394 6.59e-63 203
Msa0870630 AT5G65090.3 50.746 201 90 4 26 222 262 457 1.89e-62 203
Msa0870630 AT5G65090.1 50.746 201 90 4 26 222 262 457 1.89e-62 203
Msa0870630 AT1G05470.2 50.244 205 93 4 22 222 345 544 2.81e-62 204
Msa0870630 AT1G05470.1 50.244 205 93 4 22 222 345 544 2.81e-62 204
Msa0870630 AT2G37440.2 47.596 208 102 4 16 222 103 304 1.25e-60 195
Msa0870630 AT2G37440.1 47.596 208 102 4 16 222 184 385 6.08e-60 196
Msa0870630 AT2G37440.3 47.596 208 102 4 16 222 184 385 6.08e-60 196
Msa0870630 AT5G04980.4 48.515 202 96 4 25 222 156 353 4.28e-59 191
Msa0870630 AT5G04980.1 48.515 202 96 4 25 222 191 388 1.72e-58 191
Msa0870630 AT5G04980.3 48.515 202 96 4 25 222 191 388 1.72e-58 191
Msa0870630 AT5G04980.2 48.515 202 96 4 25 222 220 417 2.14e-58 191
Msa0870630 AT1G34120.5 44.053 227 115 8 1 222 155 374 4.91e-57 187
Msa0870630 AT4G18010.2 46.535 202 102 4 22 222 385 581 2.17e-56 188
Msa0870630 AT4G18010.1 46.535 202 102 4 22 222 385 581 6.96e-56 188
Msa0870630 AT1G34120.1 43.612 227 116 7 1 222 306 525 1.28e-55 186
Msa0870630 AT1G34120.2 43.612 227 116 7 1 222 310 529 1.47e-55 186
Msa0870630 AT1G34120.3 43.172 227 116 8 1 222 310 528 5.06e-53 179
Msa0870630 AT2G01900.1 41.475 217 122 3 7 222 133 345 3.36e-52 174
Msa0870630 AT2G01900.3 41.475 217 122 3 7 222 141 353 4.31e-52 174
Msa0870630 AT1G71710.2 43.939 198 103 3 26 222 399 589 7.53e-50 172
Msa0870630 AT1G71710.1 43.939 198 103 3 26 222 408 598 8.12e-50 172
Msa0870630 AT2G01900.2 40.092 217 116 4 7 222 133 336 3.01e-47 160
Msa0870630 AT1G34120.4 42.105 171 92 4 1 166 306 474 3.55e-38 138
Msa0870630 AT1G05630.2 31.915 235 123 7 16 222 642 867 5.11e-27 108
Msa0870630 AT1G05630.3 31.915 235 123 7 16 222 642 867 6.37e-27 108
Msa0870630 AT2G31830.2 30.638 235 126 7 16 222 651 876 1.45e-26 107
Msa0870630 AT2G31830.1 30.638 235 126 7 16 222 651 876 1.94e-26 107
Msa0870630 AT2G31830.3 30.638 235 126 7 16 222 651 876 2.10e-26 107
Msa0870630 AT2G43900.1 29.114 237 131 6 14 222 646 873 3.26e-26 106
Msa0870630 AT2G43900.2 29.114 237 131 6 14 222 646 873 3.39e-26 106
Msa0870630 AT1G65580.2 28.511 235 131 5 16 222 343 568 7.44e-23 96.7
Msa0870630 AT1G65580.1 28.511 235 131 5 16 222 609 834 9.87e-23 96.7
Msa0870630 AT1G47510.4 31.868 182 95 8 43 222 72 226 3.72e-18 81.3
Msa0870630 AT1G47510.1 31.868 182 95 8 43 222 134 288 7.50e-18 81.3
Msa0870630 AT1G05630.1 40.000 95 51 3 129 222 812 901 4.15e-13 68.6

Find 69 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGACCTCAACAGTAAT+AGG 0.217504 6_1:-5181543 Msa0870630:five_prime_UTR
GTTGTAGCACATTTAGCTTC+TGG 0.239187 6_1:-5181168 Msa0870630:CDS
TAAGATTTGACTGTAGAATT+TGG 0.253750 6_1:-5177759 Msa0870630:three_prime_UTR
TGTGGTGTTATGGGATATTT+AGG 0.280551 6_1:-5181246 Msa0870630:CDS
TTCAGTTGCATGTGGTGTTA+TGG 0.281058 6_1:-5181256 Msa0870630:CDS
ACAAATTGGAACAATCTTAT+AGG 0.311233 6_1:-5181498 Msa0870630:five_prime_UTR
TATGTAACAGTCGCATATTT+TGG 0.312136 6_1:-5179402 Msa0870630:intron
ATCCATCAGTGGCAACAAAT+TGG 0.315420 6_1:-5181512 Msa0870630:five_prime_UTR
TCATGGCCTAAGATTGTTAG+AGG 0.356206 6_1:+5181057 None:intergenic
CATCATCCTCTAACAATCTT+AGG 0.357579 6_1:-5181063 Msa0870630:CDS
TTATAACGAGATTGCAGGTT+TGG 0.360404 6_1:+5181762 None:intergenic
TTGTAGCACATTTAGCTTCT+GGG 0.368059 6_1:-5181167 Msa0870630:CDS
TCAGTTGCATGTGGTGTTAT+GGG 0.377051 6_1:-5181255 Msa0870630:CDS
TGAAGACCTCAACAGTAATA+GGG 0.381134 6_1:-5181542 Msa0870630:five_prime_UTR
TTAAAATTATTACATAGGTT+TGG 0.387356 6_1:-5181687 Msa0870630:five_prime_UTR
AGTCTTTATAACGAGATTGC+AGG 0.403782 6_1:+5181757 None:intergenic
TTATTAGATGCCTAGCTAGA+TGG 0.410366 6_1:+5179344 None:intergenic
TTGGAGTATTCATAAGTGTT+TGG 0.411708 6_1:-5181329 Msa0870630:CDS
AGAAAGGTGATGAAGGTAGA+AGG 0.414224 6_1:-5181140 Msa0870630:CDS
AAGATGAGTACTTATATGTT+GGG 0.424011 6_1:+5179218 None:intergenic
ATCTAATAAGAAAGCAAGAT+TGG 0.453124 6_1:-5179330 Msa0870630:CDS
TTTATGTTGCGACCATAACT+AGG 0.454756 6_1:-5181725 Msa0870630:five_prime_UTR
TATCAAAACATTGGAGGAAG+TGG 0.455018 6_1:-5181396 Msa0870630:CDS
TTCCAATTTGTTGCCACTGA+TGG 0.460598 6_1:+5181510 None:intergenic
ACAATTTAAAATTATTACAT+AGG 0.468058 6_1:-5181692 Msa0870630:five_prime_UTR
GAAGATGAGTACTTATATGT+TGG 0.474834 6_1:+5179217 None:intergenic
TTCTGCCCCTATTACTGTTG+AGG 0.480423 6_1:+5181536 None:intergenic
TTGGTTAAAAGAACAAGTGT+TGG 0.481233 6_1:-5181310 Msa0870630:CDS
TTAGCTTCTGGGGAAAAGAA+AGG 0.481354 6_1:-5181156 Msa0870630:CDS
AGCAATATCTATTGTGGTGG+TGG 0.490845 6_1:-5179190 Msa0870630:CDS
GGTGGCCTTCCAACTAGATC+AGG 0.501700 6_1:-5179172 Msa0870630:CDS
TACATAGGTTTGGCCCTACT+CGG 0.508009 6_1:-5181677 Msa0870630:five_prime_UTR
TTATGCTGCAACCACAATTG+AGG 0.508863 6_1:-5181801 Msa0870630:five_prime_UTR
ATGGGATATTTAGGAAACAA+AGG 0.510358 6_1:-5181237 Msa0870630:CDS
CAAGAAAATTATCAAAACAT+TGG 0.513877 6_1:-5181405 Msa0870630:CDS
CTTCATTAACATTGAAAGTG+AGG 0.516557 6_1:+5177910 None:intergenic
AATAAGAAAGCAAGATTGGA+AGG 0.529530 6_1:-5179326 Msa0870630:CDS
GAAAATTATCAAAACATTGG+AGG 0.529937 6_1:-5181402 Msa0870630:CDS
ACAACAAATTTGAGTTCCCA+TGG 0.529948 6_1:-5181464 Msa0870630:five_prime_UTR
TTTCTCCTGATCTAGTTGGA+AGG 0.532772 6_1:+5179167 None:intergenic
TTAGGAAACAAAGGTTGTGT+GGG 0.539213 6_1:-5181228 Msa0870630:CDS
TAATTAGAGTGAGGAATGAA+AGG 0.540084 6_1:-5181601 Msa0870630:five_prime_UTR
GGAGTTAGTATGTTGATTGA+AGG 0.544715 6_1:-5181207 Msa0870630:CDS
GGCAAGGATGAATTTAACAT+AGG 0.550454 6_1:+5181435 None:intergenic
GTAGTCTGCAACCCTAGTTA+TGG 0.552548 6_1:+5181713 None:intergenic
TTTGGTAAATACAATTGTGG+TGG 0.554873 6_1:-5177741 Msa0870630:three_prime_UTR
TTTAGGAAACAAAGGTTGTG+TGG 0.554999 6_1:-5181229 Msa0870630:CDS
TTATGTTGCGACCATAACTA+GGG 0.556657 6_1:-5181724 Msa0870630:five_prime_UTR
ATTACTGTTGAGGTCTTCAA+AGG 0.559244 6_1:+5181546 None:intergenic
GGGGAAAAGAAAGGTGATGA+AGG 0.566624 6_1:-5181147 Msa0870630:CDS
TCCACTAGCAATATCTATTG+TGG 0.577164 6_1:-5179196 Msa0870630:CDS
ACTTGAAAGACCATCTAGCT+AGG 0.579325 6_1:-5179354 Msa0870630:CDS
TTAACATAGGTGTTAACCAT+GGG 0.581644 6_1:+5181448 None:intergenic
TGTAGCACATTTAGCTTCTG+GGG 0.589661 6_1:-5181166 Msa0870630:CDS
TTTAACATAGGTGTTAACCA+TGG 0.603323 6_1:+5181447 None:intergenic
GAATTTGGTAAATACAATTG+TGG 0.604043 6_1:-5177744 Msa0870630:three_prime_UTR
ATTGTGGTGGAGACTGAAGA+TGG 0.609468 6_1:-5177728 Msa0870630:three_prime_UTR
AGAGTTTGTTCAGTTGCATG+TGG 0.609478 6_1:-5181264 Msa0870630:CDS
TTATTGCAGGAGGTGAGCAA+AGG 0.611315 6_1:-5177953 Msa0870630:intron
GAAGACCTCAACAGTAATAG+GGG 0.617039 6_1:-5181541 Msa0870630:five_prime_UTR
TTTGTCTACAACCTCAATTG+TGG 0.624981 6_1:+5181790 None:intergenic
ATGTTAATGAAGAATGTACA+AGG 0.625047 6_1:-5177899 Msa0870630:three_prime_UTR
AGATGAGTACTTATATGTTG+GGG 0.634547 6_1:+5179219 None:intergenic
AAGTGGTTACTATACCATGC+TGG 0.634633 6_1:+5179133 None:intergenic
ACTAGCAATATCTATTGTGG+TGG 0.637512 6_1:-5179193 Msa0870630:CDS
ACCACAATAGATATTGCTAG+TGG 0.647730 6_1:+5179195 None:intergenic
AAAAGCAAAGAACACCAGCA+TGG 0.661082 6_1:-5179147 Msa0870630:intron
ATAGGTTTGGCCCTACTCGG+AGG 0.707837 6_1:-5181674 Msa0870630:five_prime_UTR
AGGGGCAGAAGATCCATCAG+TGG 0.708283 6_1:-5181523 Msa0870630:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTTATAATATTA+TGG + chr6_1:5179540-5179559 None:intergenic 0.0%
!!! ACAATTTAAAATTATTACAT+AGG - chr6_1:5177757-5177776 Msa0870630:three_prime_UTR 10.0%
!!! AAAAACTAAATTTTAGAAAT+GGG + chr6_1:5178629-5178648 None:intergenic 10.0%
!!! AATATTTTTAGGTTAAAAAA+TGG - chr6_1:5179128-5179147 Msa0870630:intron 10.0%
!!! ATATTTTTAGGTTAAAAAAT+GGG - chr6_1:5179129-5179148 Msa0870630:intron 10.0%
!!! TGTTTAAAATAATTTTTTCA+TGG - chr6_1:5180725-5180744 Msa0870630:intron 10.0%
!! TTAAAATTATTACATAGGTT+TGG - chr6_1:5177762-5177781 Msa0870630:three_prime_UTR 15.0%
!!! AAAACTAAATTTTAGAAATG+GGG + chr6_1:5178628-5178647 None:intergenic 15.0%
!!! CAAAAACTAAATTTTAGAAA+TGG + chr6_1:5178630-5178649 None:intergenic 15.0%
!! CTATTTCACTTATATTAAAA+TGG - chr6_1:5178650-5178669 Msa0870630:intron 15.0%
!!! TTGTTATTGTTTTTTACAAA+GGG + chr6_1:5178724-5178743 None:intergenic 15.0%
!!! TTTGTTATTGTTTTTTACAA+AGG + chr6_1:5178725-5178744 None:intergenic 15.0%
!!! TTGTTATTGTTTTTTTATGA+AGG - chr6_1:5178999-5179018 Msa0870630:intron 15.0%
!!! TGTTATTGTTTTTTTATGAA+GGG - chr6_1:5179000-5179019 Msa0870630:intron 15.0%
!!! TAACAACCAAATTTTAAAAT+GGG - chr6_1:5179169-5179188 Msa0870630:CDS 15.0%
!! ATCAACTTTGTAAAATTAAT+TGG + chr6_1:5179197-5179216 None:intergenic 15.0%
!!! TTTTTCATACGTAAAAATTA+GGG + chr6_1:5179749-5179768 None:intergenic 15.0%
!!! TTTTTTCATACGTAAAAATT+AGG + chr6_1:5179750-5179769 None:intergenic 15.0%
!!! CTTTTTTCTTTGTTAATTAT+AGG - chr6_1:5180346-5180365 Msa0870630:intron 15.0%
!! AAAATATCAAGCTTAAAATA+TGG + chr6_1:5180480-5180499 None:intergenic 15.0%
!! TTAATGTTATTGAAATTAGA+TGG + chr6_1:5180833-5180852 None:intergenic 15.0%
!! ATTAGAAAAATGACAAAAAT+TGG - chr6_1:5181619-5181638 Msa0870630:five_prime_UTR 15.0%
!!! TTATTCTTTTAATTAGAGTG+AGG - chr6_1:5177839-5177858 Msa0870630:three_prime_UTR 20.0%
!!! TGATAATTTTCTTGATCATT+TGG + chr6_1:5178038-5178057 None:intergenic 20.0%
!! CAAGAAAATTATCAAAACAT+TGG - chr6_1:5178044-5178063 Msa0870630:intron 20.0%
!!! ATCAAGTTGAAGAAATTTTT+AGG - chr6_1:5178336-5178355 Msa0870630:intron 20.0%
!!! TTTTTCTTGTTTATGATGAT+TGG - chr6_1:5178484-5178503 Msa0870630:intron 20.0%
!!! TTTCGAAGTGAATTTTTAAT+AGG + chr6_1:5179074-5179093 None:intergenic 20.0%
!!! CTAACAACCAAATTTTAAAA+TGG - chr6_1:5179168-5179187 Msa0870630:CDS 20.0%
!!! AACAACCAAATTTTAAAATG+GGG - chr6_1:5179170-5179189 Msa0870630:CDS 20.0%
!!! AAATGTGTTACTCAATAAAA+GGG + chr6_1:5179407-5179426 None:intergenic 20.0%
!!! TTTTATTGAGTAACACATTT+CGG - chr6_1:5179407-5179426 Msa0870630:intron 20.0%
!!! CTTTAGAATGAAACATTATT+TGG + chr6_1:5179497-5179516 None:intergenic 20.0%
!! CAAATAATGTTTCATTCTAA+AGG - chr6_1:5179495-5179514 Msa0870630:intron 20.0%
!!! ATTAATTTTAAGAACGAACT+AGG + chr6_1:5179581-5179600 None:intergenic 20.0%
!! ATTAATAGTAAACATGTCTA+AGG + chr6_1:5179604-5179623 None:intergenic 20.0%
!! AAATGTTATATGGTAGAATT+TGG + chr6_1:5179669-5179688 None:intergenic 20.0%
!!! TTTTAGACAGAAATGTTATA+TGG + chr6_1:5179679-5179698 None:intergenic 20.0%
!!! ATAACATTTCTGTCTAAAAT+TGG - chr6_1:5179680-5179699 Msa0870630:intron 20.0%
!!! TAAAATTGGTTTTAATGGTA+AGG - chr6_1:5179694-5179713 Msa0870630:intron 20.0%
!!! AAAATTGGTTTTAATGGTAA+GGG - chr6_1:5179695-5179714 Msa0870630:intron 20.0%
!! TTTACGTATGAAAAAAATTC+CGG - chr6_1:5179754-5179773 Msa0870630:intron 20.0%
!! AAAGTCTATTTCATATTTGT+AGG - chr6_1:5179870-5179889 Msa0870630:intron 20.0%
!!! GTTAACAACTGTAATTTTTT+TGG - chr6_1:5180640-5180659 Msa0870630:intron 20.0%
!!! GTAAAACATTTTTACATTGT+TGG + chr6_1:5180806-5180825 None:intergenic 20.0%
!! TGTTGTGTATATTAAGAAAA+TGG - chr6_1:5181187-5181206 Msa0870630:CDS 20.0%
!! GTTGTGTATATTAAGAAAAT+GGG - chr6_1:5181188-5181207 Msa0870630:CDS 20.0%
!!! TTCTTCAAGTTTTTTGAAAT+TGG - chr6_1:5181448-5181467 Msa0870630:exon 20.0%
!!! TTTTTGAAATTGGTATTCTA+AGG - chr6_1:5181458-5181477 Msa0870630:five_prime_UTR 20.0%
!! AAAAACGTAGACGATTTTAT+TGG + chr6_1:5177801-5177820 None:intergenic 25.0%
! ACAAATTGGAACAATCTTAT+AGG - chr6_1:5177951-5177970 Msa0870630:intron 25.0%
! GAAAATTATCAAAACATTGG+AGG - chr6_1:5178047-5178066 Msa0870630:intron 25.0%
! TAAACAAGAAAAAACACAGA+GGG + chr6_1:5178477-5178496 None:intergenic 25.0%
! ATAAACAAGAAAAAACACAG+AGG + chr6_1:5178478-5178497 None:intergenic 25.0%
!!! AACTGCAACAAGTTTTTTTA+CGG + chr6_1:5178569-5178588 None:intergenic 25.0%
!!! AAAAAAACTTGTTGCAGTTT+TGG - chr6_1:5178570-5178589 Msa0870630:intron 25.0%
! ATCGTAAACTAGTGAAAATA+TGG + chr6_1:5178599-5178618 None:intergenic 25.0%
!!! TTTTCACTAGTTTACGATAT+TGG - chr6_1:5178601-5178620 Msa0870630:intron 25.0%
! ATAAAGTGATCGATCAAAAT+TGG + chr6_1:5178793-5178812 None:intergenic 25.0%
!! GATCGATCACTTTATTTATT+AGG - chr6_1:5178798-5178817 Msa0870630:intron 25.0%
!! ATTAGGCTTAATTGCAATTT+TGG - chr6_1:5178815-5178834 Msa0870630:intron 25.0%
!! TGTGACTTTCTATTTTCTTA+GGG + chr6_1:5178874-5178893 None:intergenic 25.0%
!! CTTGTCAAGTCAATATTTTT+AGG - chr6_1:5179117-5179136 Msa0870630:intron 25.0%
!!! TTTCAAGTTTAGTCTTTCTT+AGG - chr6_1:5179279-5179298 Msa0870630:CDS 25.0%
!! AATGTGTTACTCAATAAAAG+GGG + chr6_1:5179406-5179425 None:intergenic 25.0%
!! GAAATGTGTTACTCAATAAA+AGG + chr6_1:5179408-5179427 None:intergenic 25.0%
! TTTATTGAGTAACACATTTC+GGG - chr6_1:5179408-5179427 Msa0870630:intron 25.0%
!!! CTGTCTAAAATTGGTTTTAA+TGG - chr6_1:5179689-5179708 Msa0870630:intron 25.0%
!! AATTTTTATCGATGATCTGT+TGG + chr6_1:5179808-5179827 None:intergenic 25.0%
! ATCTAATAAGAAAGCAAGAT+TGG - chr6_1:5180119-5180138 Msa0870630:intron 25.0%
! AAGATGAGTACTTATATGTT+GGG + chr6_1:5180234-5180253 None:intergenic 25.0%
!! AAGAAAAAAGTATAAGCAAG+TGG + chr6_1:5180336-5180355 None:intergenic 25.0%
! TTAATTATAGGCCATGAATT+AGG - chr6_1:5180358-5180377 Msa0870630:intron 25.0%
! TAATTATAGGCCATGAATTA+GGG - chr6_1:5180359-5180378 Msa0870630:intron 25.0%
! TTCATGGAATTAATTATGTG+TGG - chr6_1:5180741-5180760 Msa0870630:intron 25.0%
!!! AGTATTGTAGAGTTTTTTTG+AGG - chr6_1:5180907-5180926 Msa0870630:intron 25.0%
!!! GTATTGTAGAGTTTTTTTGA+GGG - chr6_1:5180908-5180927 Msa0870630:intron 25.0%
! AGAAATTATGCATTGGAAAT+TGG - chr6_1:5181238-5181257 Msa0870630:CDS 25.0%
! GCAAAACCATAAGAAAATTA+AGG - chr6_1:5181365-5181384 Msa0870630:CDS 25.0%
!! CATTGTCCTTAATTTTCTTA+TGG + chr6_1:5181374-5181393 None:intergenic 25.0%
! ATGTTTCATGTTATTATTGC+AGG - chr6_1:5181483-5181502 Msa0870630:five_prime_UTR 25.0%
! ATGTTAATGAAGAATGTACA+AGG - chr6_1:5181550-5181569 Msa0870630:five_prime_UTR 25.0%
!! ATATGTTTTCAGTCATGTTA+TGG - chr6_1:5181594-5181613 Msa0870630:five_prime_UTR 25.0%
!! CAAAAAAAATGTCGGATTTT+AGG + chr6_1:5181648-5181667 None:intergenic 25.0%
!!! CTAAAATCCGACATTTTTTT+TGG - chr6_1:5181646-5181665 Msa0870630:five_prime_UTR 25.0%
! TAGATCTCCAAAAAAAATGT+CGG + chr6_1:5181656-5181675 None:intergenic 25.0%
!!! TGGAGATCTAAATTTTAGAA+AGG - chr6_1:5181666-5181685 Msa0870630:five_prime_UTR 25.0%
! TAAGATTTGACTGTAGAATT+TGG - chr6_1:5181690-5181709 Msa0870630:five_prime_UTR 25.0%
! GAATTTGGTAAATACAATTG+TGG - chr6_1:5181705-5181724 Msa0870630:five_prime_UTR 25.0%
!! ATATTTTGCATGACAAACAT+CGG + chr6_1:5181774-5181793 None:intergenic 25.0%
TAATTAGAGTGAGGAATGAA+AGG - chr6_1:5177848-5177867 Msa0870630:three_prime_UTR 30.0%
! GAAAGGCTTATCAAATTTTC+AGG - chr6_1:5177865-5177884 Msa0870630:three_prime_UTR 30.0%
TTAACATAGGTGTTAACCAT+GGG + chr6_1:5178004-5178023 None:intergenic 30.0%
TTTAACATAGGTGTTAACCA+TGG + chr6_1:5178005-5178024 None:intergenic 30.0%
! ATTTTCTTGATCATTTGGCA+AGG + chr6_1:5178033-5178052 None:intergenic 30.0%
!!! CATCTTGTACTTGTTTTTGT+TGG + chr6_1:5178081-5178100 None:intergenic 30.0%
CAACAAAAACAAGTACAAGA+TGG - chr6_1:5178079-5178098 Msa0870630:intron 30.0%
GATGGTAGCTAGTAAAAAAA+TGG - chr6_1:5178097-5178116 Msa0870630:intron 30.0%
GTAGCTAGTAAAAAAATGGT+TGG - chr6_1:5178101-5178120 Msa0870630:intron 30.0%
! TTGGAGTATTCATAAGTGTT+TGG - chr6_1:5178120-5178139 Msa0870630:intron 30.0%
TTGGTTAAAAGAACAAGTGT+TGG - chr6_1:5178139-5178158 Msa0870630:intron 30.0%
ATGGGATATTTAGGAAACAA+AGG - chr6_1:5178212-5178231 Msa0870630:intron 30.0%
TGCAAAAGGAGATAAACTTA+GGG + chr6_1:5178754-5178773 None:intergenic 30.0%
! TGACTTTCTATTTTCTTAGG+GGG + chr6_1:5178872-5178891 None:intergenic 30.0%
! GTGACTTTCTATTTTCTTAG+GGG + chr6_1:5178873-5178892 None:intergenic 30.0%
! GTGTGACTTTCTATTTTCTT+AGG + chr6_1:5178875-5178894 None:intergenic 30.0%
!! TGCATTGACTTGATCAAAAT+TGG - chr6_1:5178931-5178950 Msa0870630:intron 30.0%
GTATCACAATCTTGTGATAT+TGG + chr6_1:5179026-5179045 None:intergenic 30.0%
ATCACAAGATTGTGATACTT+AGG - chr6_1:5179028-5179047 Msa0870630:intron 30.0%
! TTTAGGTTAAAAAATGGGAG+TGG - chr6_1:5179134-5179153 Msa0870630:intron 30.0%
TTAGGTTAAAAAATGGGAGT+GGG - chr6_1:5179135-5179154 Msa0870630:intron 30.0%
!!! TTGGTCCCCATTTTAAAATT+TGG + chr6_1:5179178-5179197 None:intergenic 30.0%
! ATATCTAATTTGCATGGACT+TGG + chr6_1:5179339-5179358 None:intergenic 30.0%
AAGTCCATGCAAATTAGATA+TGG - chr6_1:5179338-5179357 Msa0870630:CDS 30.0%
! CAAACCATATCTAATTTGCA+TGG + chr6_1:5179345-5179364 None:intergenic 30.0%
! ATGTGTTACTCAATAAAAGG+GGG + chr6_1:5179405-5179424 None:intergenic 30.0%
TGAAAAAAATTCCGGTTGAA+AGG - chr6_1:5179762-5179781 Msa0870630:intron 30.0%
! TATGTAACAGTCGCATATTT+TGG - chr6_1:5180047-5180066 Msa0870630:intron 30.0%
AATAAGAAAGCAAGATTGGA+AGG - chr6_1:5180123-5180142 Msa0870630:intron 30.0%
AGATGAGTACTTATATGTTG+GGG + chr6_1:5180233-5180252 None:intergenic 30.0%
GAAGATGAGTACTTATATGT+TGG + chr6_1:5180235-5180254 None:intergenic 30.0%
CAATTCAAATCCCTAATTCA+TGG + chr6_1:5180372-5180391 None:intergenic 30.0%
TTAGGGATTTGAATTGTCTA+TGG - chr6_1:5180376-5180395 Msa0870630:intron 30.0%
!! TCAGACGGTCTATATTTTAA+CGG - chr6_1:5180453-5180472 Msa0870630:intron 30.0%
AATCCAAATCTATGTAGTAG+AGG - chr6_1:5180602-5180621 Msa0870630:intron 30.0%
ATCCAAATCTATGTAGTAGA+GGG - chr6_1:5180603-5180622 Msa0870630:intron 30.0%
AACTAACAACATTCCTTTGA+TGG - chr6_1:5180969-5180988 Msa0870630:intron 30.0%
ACTAACAACATTCCTTTGAT+GGG - chr6_1:5180970-5180989 Msa0870630:intron 30.0%
TGTGATAGAATTCTATGGTA+TGG - chr6_1:5180998-5181017 Msa0870630:intron 30.0%
AGAATTCTATGGTATGGTAA+AGG - chr6_1:5181004-5181023 Msa0870630:intron 30.0%
TGATTGGATTGCAAAATTGT+TGG + chr6_1:5181161-5181180 None:intergenic 30.0%
ATACACAACACTTACATGAT+TGG + chr6_1:5181177-5181196 None:intergenic 30.0%
AGGGTATAGAAATTATGCAT+TGG - chr6_1:5181231-5181250 Msa0870630:CDS 30.0%
TTTCATGTTATTATTGCAGG+AGG - chr6_1:5181486-5181505 Msa0870630:five_prime_UTR 30.0%
CTTCATTAACATTGAAAGTG+AGG + chr6_1:5181542-5181561 None:intergenic 30.0%
TTTGGTAAATACAATTGTGG+TGG - chr6_1:5181708-5181727 Msa0870630:five_prime_UTR 30.0%
TTTGTCTACAACCTCAATTG+TGG + chr6_1:5177662-5177681 None:intergenic 35.0%
TTATAACGAGATTGCAGGTT+TGG + chr6_1:5177690-5177709 None:intergenic 35.0%
AGTCTTTATAACGAGATTGC+AGG + chr6_1:5177695-5177714 None:intergenic 35.0%
TTTATGTTGCGACCATAACT+AGG - chr6_1:5177724-5177743 Msa0870630:three_prime_UTR 35.0%
TTATGTTGCGACCATAACTA+GGG - chr6_1:5177725-5177744 Msa0870630:three_prime_UTR 35.0%
ATTACTGTTGAGGTCTTCAA+AGG + chr6_1:5177906-5177925 None:intergenic 35.0%
TTGAAGACCTCAACAGTAAT+AGG - chr6_1:5177906-5177925 Msa0870630:three_prime_UTR 35.0%
TGAAGACCTCAACAGTAATA+GGG - chr6_1:5177907-5177926 Msa0870630:three_prime_UTR 35.0%
! ACAACAAATTTGAGTTCCCA+TGG - chr6_1:5177985-5178004 Msa0870630:intron 35.0%
GGCAAGGATGAATTTAACAT+AGG + chr6_1:5178017-5178036 None:intergenic 35.0%
TATCAAAACATTGGAGGAAG+TGG - chr6_1:5178053-5178072 Msa0870630:intron 35.0%
!! TGTGGTGTTATGGGATATTT+AGG - chr6_1:5178203-5178222 Msa0870630:intron 35.0%
TTTAGGAAACAAAGGTTGTG+TGG - chr6_1:5178220-5178239 Msa0870630:intron 35.0%
TTAGGAAACAAAGGTTGTGT+GGG - chr6_1:5178221-5178240 Msa0870630:intron 35.0%
! GGAGTTAGTATGTTGATTGA+AGG - chr6_1:5178242-5178261 Msa0870630:intron 35.0%
! TTGTAGCACATTTAGCTTCT+GGG - chr6_1:5178282-5178301 Msa0870630:intron 35.0%
! GGATGATGTTTTGTGTTTCT+AGG + chr6_1:5178374-5178393 None:intergenic 35.0%
CATCATCCTCTAACAATCTT+AGG - chr6_1:5178386-5178405 Msa0870630:intron 35.0%
ATCGCAAAATTGTGGTACTT+AGG + chr6_1:5178696-5178715 None:intergenic 35.0%
CAAAAGGAGATAAACTTAGG+GGG + chr6_1:5178752-5178771 None:intergenic 35.0%
GCAAAAGGAGATAAACTTAG+GGG + chr6_1:5178753-5178772 None:intergenic 35.0%
GTGCAAAAGGAGATAAACTT+AGG + chr6_1:5178755-5178774 None:intergenic 35.0%
GCAAGATTGTGATACTTAAG+GGG + chr6_1:5178841-5178860 None:intergenic 35.0%
CGCAAGATTGTGATACTTAA+GGG + chr6_1:5178842-5178861 None:intergenic 35.0%
TCGCAAGATTGTGATACTTA+AGG + chr6_1:5178843-5178862 None:intergenic 35.0%
! GTATCACAATCTTGCGATTT+TGG - chr6_1:5178846-5178865 Msa0870630:intron 35.0%
AGAAAATAGAAAGTCACACG+TGG - chr6_1:5178876-5178895 Msa0870630:intron 35.0%
TGACTTGATCAAAATTGGTC+TGG - chr6_1:5178936-5178955 Msa0870630:intron 35.0%
! GACTTGATCAAAATTGGTCT+GGG - chr6_1:5178937-5178956 Msa0870630:intron 35.0%
! ACTTGATCAAAATTGGTCTG+GGG - chr6_1:5178938-5178957 Msa0870630:intron 35.0%
! TTTACTCCCTTTTGCACTTT+TGG + chr6_1:5178965-5178984 None:intergenic 35.0%
CAAAAGGGAGTAAACTTAGA+GGG - chr6_1:5178971-5178990 Msa0870630:intron 35.0%
TAAAAAATGGGAGTGGGAAT+TGG - chr6_1:5179141-5179160 Msa0870630:intron 35.0%
AATTAACTGCACTGCTATGT+TGG + chr6_1:5179252-5179271 None:intergenic 35.0%
ACATAGCAGTGCAGTTAATT+CGG - chr6_1:5179252-5179271 Msa0870630:CDS 35.0%
! TTTAGTCTTTCTTAGGTAGC+AGG - chr6_1:5179286-5179305 Msa0870630:CDS 35.0%
AATTTGCATGGACTTGGATT+TGG + chr6_1:5179333-5179352 None:intergenic 35.0%
! TGTGTTACTCAATAAAAGGG+GGG + chr6_1:5179404-5179423 None:intergenic 35.0%
! TTATACTAGAGTACTAGGCT+AGG + chr6_1:5179472-5179491 None:intergenic 35.0%
! TGGACTTATACTAGAGTACT+AGG + chr6_1:5179477-5179496 None:intergenic 35.0%
!!! AACAGTCGCATATTTTGGTT+TGG - chr6_1:5180052-5180071 Msa0870630:intron 35.0%
!!! ACAGTCGCATATTTTGGTTT+GGG - chr6_1:5180053-5180072 Msa0870630:intron 35.0%
TTATTAGATGCCTAGCTAGA+TGG + chr6_1:5180108-5180127 None:intergenic 35.0%
CTTCAAAAAGAGTTAGCAGA+AGG - chr6_1:5180166-5180185 Msa0870630:intron 35.0%
TCCACTAGCAATATCTATTG+TGG - chr6_1:5180253-5180272 Msa0870630:intron 35.0%
ACCACAATAGATATTGCTAG+TGG + chr6_1:5180257-5180276 None:intergenic 35.0%
ACTAGCAATATCTATTGTGG+TGG - chr6_1:5180256-5180275 Msa0870630:intron 35.0%
TACCCTCTACTACATAGATT+TGG + chr6_1:5180608-5180627 None:intergenic 35.0%
CTAACAACATTCCTTTGATG+GGG - chr6_1:5180971-5180990 Msa0870630:intron 35.0%
! ATTTCCACAAGTTCTTTTGC+TGG + chr6_1:5181125-5181144 None:intergenic 35.0%
TGGATTGCAAAATTGTTGGA+GGG + chr6_1:5181157-5181176 None:intergenic 35.0%
TTGGATTGCAAAATTGTTGG+AGG + chr6_1:5181158-5181177 None:intergenic 35.0%
AAATGCTAACTAGTGCTCTA+AGG - chr6_1:5181211-5181230 Msa0870630:CDS 35.0%
AATGCTAACTAGTGCTCTAA+GGG - chr6_1:5181212-5181231 Msa0870630:CDS 35.0%
CATTGGAAATTGGTGAAAAG+TGG - chr6_1:5181248-5181267 Msa0870630:CDS 35.0%
TTTGCTAACCAGTATCCTAA+GGG + chr6_1:5181350-5181369 None:intergenic 35.0%
! TTTTGCTAACCAGTATCCTA+AGG + chr6_1:5181351-5181370 None:intergenic 35.0%
TTATGCTGCAACCACAATTG+AGG - chr6_1:5177648-5177667 Msa0870630:three_prime_UTR 40.0%
!! ATTTTATTGGCCTCCGAGTA+GGG + chr6_1:5177788-5177807 None:intergenic 40.0%
GAAGACCTCAACAGTAATAG+GGG - chr6_1:5177908-5177927 Msa0870630:three_prime_UTR 40.0%
ATCCATCAGTGGCAACAAAT+TGG - chr6_1:5177937-5177956 Msa0870630:three_prime_UTR 40.0%
!! TTCCAATTTGTTGCCACTGA+TGG + chr6_1:5177942-5177961 None:intergenic 40.0%
! AGAGTTTGTTCAGTTGCATG+TGG - chr6_1:5178185-5178204 Msa0870630:intron 40.0%
! TTCAGTTGCATGTGGTGTTA+TGG - chr6_1:5178193-5178212 Msa0870630:intron 40.0%
!! TCAGTTGCATGTGGTGTTAT+GGG - chr6_1:5178194-5178213 Msa0870630:intron 40.0%
! GTTGTAGCACATTTAGCTTC+TGG - chr6_1:5178281-5178300 Msa0870630:intron 40.0%
! TGTAGCACATTTAGCTTCTG+GGG - chr6_1:5178283-5178302 Msa0870630:intron 40.0%
! TTAGCTTCTGGGGAAAAGAA+AGG - chr6_1:5178293-5178312 Msa0870630:intron 40.0%
AGAAAGGTGATGAAGGTAGA+AGG - chr6_1:5178309-5178328 Msa0870630:intron 40.0%
TCATGGCCTAAGATTGTTAG+AGG + chr6_1:5178395-5178414 None:intergenic 40.0%
CAGAGAGACAAACTTACTCA+TGG + chr6_1:5178412-5178431 None:intergenic 40.0%
GCAAAATTGTGGTACTTAGG+AGG + chr6_1:5178693-5178712 None:intergenic 40.0%
GGGTCAAAATCGCAAAATTG+TGG + chr6_1:5178704-5178723 None:intergenic 40.0%
! TCGATCAAAATTGGTCTGGA+GGG + chr6_1:5178784-5178803 None:intergenic 40.0%
! ATCGATCAAAATTGGTCTGG+AGG + chr6_1:5178785-5178804 None:intergenic 40.0%
GTGATCGATCAAAATTGGTC+TGG + chr6_1:5178788-5178807 None:intergenic 40.0%
CACCTCACTTTAAGTGATGT+GGG - chr6_1:5178899-5178918 Msa0870630:intron 40.0%
! CTTGATCAAAATTGGTCTGG+GGG - chr6_1:5178939-5178958 Msa0870630:intron 40.0%
GCAAAAGGGAGTAAACTTAG+AGG - chr6_1:5178970-5178989 Msa0870630:intron 40.0%
! TTTTAATGGTAAGGGTCTCG+AGG - chr6_1:5179703-5179722 Msa0870630:intron 40.0%
!!! CAGTCGCATATTTTGGTTTG+GGG - chr6_1:5180054-5180073 Msa0870630:intron 40.0%
ACTTGAAAGACCATCTAGCT+AGG - chr6_1:5180095-5180114 Msa0870630:intron 40.0%
CAAAAAGAGTTAGCAGAAGG+TGG - chr6_1:5180169-5180188 Msa0870630:intron 40.0%
!! GTTTTTGAGGGTTGGAAAGA+AGG - chr6_1:5180193-5180212 Msa0870630:intron 40.0%
AGCAATATCTATTGTGGTGG+TGG - chr6_1:5180259-5180278 Msa0870630:intron 40.0%
TTTCTCCTGATCTAGTTGGA+AGG + chr6_1:5180285-5180304 None:intergenic 40.0%
! TGCTTTTCTCCTGATCTAGT+TGG + chr6_1:5180289-5180308 None:intergenic 40.0%
AAAAGCAAAGAACACCAGCA+TGG - chr6_1:5180302-5180321 Msa0870630:intron 40.0%
AAGTGGTTACTATACCATGC+TGG + chr6_1:5180319-5180338 None:intergenic 40.0%
!! TCAGATAGCCAATGTTTTGG+TGG + chr6_1:5180558-5180577 None:intergenic 40.0%
! CGTTCAGATAGCCAATGTTT+TGG + chr6_1:5180561-5180580 None:intergenic 40.0%
! AAACATTGGCTATCTGAACG+TGG - chr6_1:5180561-5180580 Msa0870630:intron 40.0%
! AACATTGGCTATCTGAACGT+GGG - chr6_1:5180562-5180581 Msa0870630:intron 40.0%
GCAGGTGTGATAGAATTCTA+TGG - chr6_1:5180993-5181012 Msa0870630:intron 40.0%
TCATCCAGCAAAAGAACTTG+TGG - chr6_1:5181118-5181137 Msa0870630:CDS 40.0%
CATTCTTACCTATTGCCCTT+AGG - chr6_1:5181332-5181351 Msa0870630:CDS 40.0%
GTAGTCTGCAACCCTAGTTA+TGG + chr6_1:5177739-5177758 None:intergenic 45.0%
TACATAGGTTTGGCCCTACT+CGG - chr6_1:5177772-5177791 Msa0870630:three_prime_UTR 45.0%
!! GATTTTATTGGCCTCCGAGT+AGG + chr6_1:5177789-5177808 None:intergenic 45.0%
TTCTGCCCCTATTACTGTTG+AGG + chr6_1:5177916-5177935 None:intergenic 45.0%
GGGGAAAAGAAAGGTGATGA+AGG - chr6_1:5178302-5178321 Msa0870630:intron 45.0%
! TGGAGGGCTAAAAGTGCAAA+AGG + chr6_1:5178768-5178787 None:intergenic 45.0%
GCACCTCACTTTAAGTGATG+TGG - chr6_1:5178898-5178917 Msa0870630:intron 45.0%
CACCCACATCACTTAAAGTG+AGG + chr6_1:5178904-5178923 None:intergenic 45.0%
AGGGAGTAAACTTAGAGGGT+CGG - chr6_1:5178975-5178994 Msa0870630:intron 45.0%
!! AACACATTTCGGGTTCTTGC+TGG - chr6_1:5179418-5179437 Msa0870630:intron 45.0%
! AGCAGAAGGTGGAGTTTTTG+AGG - chr6_1:5180180-5180199 Msa0870630:intron 45.0%
! GCAGAAGGTGGAGTTTTTGA+GGG - chr6_1:5180181-5180200 Msa0870630:intron 45.0%
!! AAGGTGGAGTTTTTGAGGGT+TGG - chr6_1:5180185-5180204 Msa0870630:intron 45.0%
!! CGTAGTTTGCACTTTTGTGC+CGG - chr6_1:5180419-5180438 Msa0870630:intron 45.0%
!! CCGTCTGATTTTGATCCAAC+CGG + chr6_1:5180441-5180460 None:intergenic 45.0%
CCGGTTGGATCAAAATCAGA+CGG - chr6_1:5180438-5180457 Msa0870630:intron 45.0%
!! TTCTGAGGCCACCAAAACAT+TGG - chr6_1:5180547-5180566 Msa0870630:intron 45.0%
!! GTAGAGAAGAGTGCTGAAAC+TGG + chr6_1:5181082-5181101 None:intergenic 45.0%
ACCTATTGCCCTTAGGATAC+TGG - chr6_1:5181339-5181358 Msa0870630:CDS 45.0%
ACCAGTATCCTAAGGGCAAT+AGG + chr6_1:5181343-5181362 None:intergenic 45.0%
TTATTGCAGGAGGTGAGCAA+AGG - chr6_1:5181496-5181515 Msa0870630:five_prime_UTR 45.0%
! ATTGTGGTGGAGACTGAAGA+TGG - chr6_1:5181721-5181740 Msa0870630:five_prime_UTR 45.0%
!! AATATATCATAAAATATAAT+AGG - chr6_1:5180851-5180870 Msa0870630:intron 5.0%
! TGGGGGCCAAAAGTGCAAAA+GGG - chr6_1:5178956-5178975 Msa0870630:intron 50.0%
GCAAGTTCTCGCCTTTCAAC+CGG + chr6_1:5179776-5179795 None:intergenic 50.0%
!! GTTTGCACTTTTGTGCCGGT+TGG - chr6_1:5180423-5180442 Msa0870630:intron 50.0%
CACCCTCTAACATCGTTCTG+AGG - chr6_1:5180532-5180551 Msa0870630:intron 50.0%
GGCCTCAGAACGATGTTAGA+GGG + chr6_1:5180537-5180556 None:intergenic 50.0%
TGGCCTCAGAACGATGTTAG+AGG + chr6_1:5180538-5180557 None:intergenic 50.0%
ACGTGGGAATTTGTGACTGC+AGG - chr6_1:5180578-5180597 Msa0870630:intron 50.0%
CAACATTCCTTTGATGGGGC+AGG - chr6_1:5180975-5180994 Msa0870630:intron 50.0%
TATCACACCTGCCCCATCAA+AGG + chr6_1:5180985-5181004 None:intergenic 50.0%
ATAGGTTTGGCCCTACTCGG+AGG - chr6_1:5177775-5177794 Msa0870630:three_prime_UTR 55.0%
AGGGGCAGAAGATCCATCAG+TGG - chr6_1:5177926-5177945 Msa0870630:three_prime_UTR 55.0%
! CTGGGGGCCAAAAGTGCAAA+AGG - chr6_1:5178955-5178974 Msa0870630:intron 55.0%
GGTGGCCTTCCAACTAGATC+AGG - chr6_1:5180277-5180296 Msa0870630:intron 55.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 5177645 5181826 5177645 ID=Msa0870630;Name=Msa0870630
chr6_1 mRNA 5177645 5181826 5177645 ID=Msa0870630-mRNA-1;Parent=Msa0870630;Name=Msa0870630-mRNA-1;_AED=0.24;_eAED=0.24;_QI=372|0.5|1|1|0.5|0.66|3|315|223
chr6_1 exon 5177645 5177966 5177645 ID=Msa0870630-mRNA-1:exon:1656;Parent=Msa0870630-mRNA-1
chr6_1 exon 5179148 5179414 5179148 ID=Msa0870630-mRNA-1:exon:1655;Parent=Msa0870630-mRNA-1
chr6_1 exon 5181057 5181826 5181057 ID=Msa0870630-mRNA-1:exon:1654;Parent=Msa0870630-mRNA-1
chr6_1 five_prime_UTR 5181455 5181826 5181455 ID=Msa0870630-mRNA-1:five_prime_utr;Parent=Msa0870630-mRNA-1
chr6_1 CDS 5181057 5181454 5181057 ID=Msa0870630-mRNA-1:cds;Parent=Msa0870630-mRNA-1
chr6_1 CDS 5179148 5179414 5179148 ID=Msa0870630-mRNA-1:cds;Parent=Msa0870630-mRNA-1
chr6_1 CDS 5177960 5177966 5177960 ID=Msa0870630-mRNA-1:cds;Parent=Msa0870630-mRNA-1
chr6_1 three_prime_UTR 5177645 5177959 5177645 ID=Msa0870630-mRNA-1:three_prime_utr;Parent=Msa0870630-mRNA-1
Gene Sequence

>Msa0870630

ATGTTAAATTCATCCTTGCCAAATGATCAAGAAAATTATCAAAACATTGGAGGAAGTGGAACCAACAAAAACAAGTACAAGATGGTAGCTAGTAAAAAAATGGTTGGAGTATTCATAAGTGTTTGGTTAAAAGAACAAGTGTTGGAAAAATATTGTGTTTCAAATGTGAGAGTTTGTTCAGTTGCATGTGGTGTTATGGGATATTTAGGAAACAAAGGTTGTGTGGGAGTTAGTATGTTGATTGAAGGAACAAGTTTTTGTTTTGTTGTAGCACATTTAGCTTCTGGGGAAAAGAAAGGTGATGAAGGTAGAAGGAATCATCAAGTTGAAGAAATTTTTAGGAGAACATCTTTTCCTAGAAACACAAAACATCATCCTCTAACAATCTTAGGCCATGATCGCATATTTTGGTTTGGGGATCTCAACTATAGACTATACTTGAAAGACCATCTAGCTAGGCATCTAATAAGAAAGCAAGATTGGAAGGCTTTGCAAGAGTTTGATCAACTTCAAAAAGAGTTAGCAGAAGGTGGAGTTTTTGAGGGTTGGAAAGAAGGTAACGTAGAATTTGCCCCAACATATAAGTACTCATCTTCCACTAGCAATATCTATTGTGGTGGTGGCCTTCCAACTAGATCAGGAGAAAAGCAAAGAACACCAGCATGGAGGTGA

Protein sequence

>Msa0870630

MLNSSLPNDQENYQNIGGSGTNKNKYKMVASKKMVGVFISVWLKEQVLEKYCVSNVRVCSVACGVMGYLGNKGCVGVSMLIEGTSFCFVVAHLASGEKKGDEGRRNHQVEEIFRRTSFPRNTKHHPLTILGHDRIFWFGDLNYRLYLKDHLARHLIRKQDWKALQEFDQLQKELAEGGVFEGWKEGNVEFAPTYKYSSSTSNIYCGGGLPTRSGEKQRTPAWR*