AlfalfaGEDB | Msa0411280

M. sativa cultivar zhongmu-4 / Msa0411280

KEGG: -
GO: GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0411280	XP_003600351.1	92.308	78	6	0	3	80	658	735	2.67e-38	145

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0411280	sp\|Q8VZK9\|CSLE1_ARATH	44.000	75	39	1	1	75	653	724	1.08e-13	67.4

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0411280	G7IV14	92.308	78	6	0	3	80	658	735	1.28e-38	145

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004350	Msa0411280	0.803389	3.568697e-49	-8.615850e-47
Msa0006700	Msa0411280	0.833567	4.951693e-56	-8.615850e-47
Msa0008850	Msa0411280	0.838892	2.194423e-57	-8.615850e-47
Msa0017120	Msa0411280	0.833258	5.912770e-56	-8.615850e-47
Msa0020630	Msa0411280	0.836398	9.576900e-57	-8.615850e-47
Msa0027540	Msa0411280	0.802755	4.825959e-49	-8.615850e-47
Msa0030000	Msa0411280	0.813446	2.548946e-51	-8.615850e-47
Msa0030730	Msa0411280	0.817636	2.975035e-52	-8.615850e-47
Msa0037820	Msa0411280	0.815113	1.091747e-51	-8.615850e-47
Msa0047470	Msa0411280	0.841151	5.655346e-58	-8.615850e-47
Msa0055280	Msa0411280	0.854054	1.588868e-61	-8.615850e-47
Msa0060350	Msa0411280	0.812057	5.133131e-51	-8.615850e-47
Msa0060600	Msa0411280	0.816647	4.964188e-52	-8.615850e-47
Msa0062750	Msa0411280	0.838221	3.271201e-57	-8.615850e-47
Msa0065390	Msa0411280	0.800602	1.334166e-48	-8.615850e-47
Msa0068410	Msa0411280	0.800235	1.585311e-48	-8.615850e-47
Msa0075310	Msa0411280	0.801168	1.022460e-48	-8.615850e-47
Msa0079250	Msa0411280	0.816926	4.297607e-52	-8.615850e-47
Msa0083160	Msa0411280	0.815442	9.224401e-52	-8.615850e-47
Msa0084680	Msa0411280	0.817490	3.209162e-52	-8.615850e-47
Msa0089210	Msa0411280	0.831630	1.496688e-55	-8.615850e-47
Msa0091480	Msa0411280	0.818902	1.537949e-52	-8.615850e-47
Msa0091770	Msa0411280	0.808245	3.404823e-50	-8.615850e-47
Msa0101060	Msa0411280	0.847930	8.465509e-60	-8.615850e-47
Msa0105210	Msa0411280	0.821752	3.415912e-53	-8.615850e-47
Msa0105340	Msa0411280	0.834177	3.485644e-56	-8.615850e-47
Msa0113160	Msa0411280	0.801615	8.282327e-49	-8.615850e-47
Msa0114250	Msa0411280	0.846814	1.714281e-59	-8.615850e-47
Msa0125230	Msa0411280	0.806622	7.523131e-50	-8.615850e-47
Msa0125440	Msa0411280	0.808442	3.091417e-50	-8.615850e-47
Msa0130800	Msa0411280	0.825339	4.946243e-54	-8.615850e-47
Msa0133440	Msa0411280	0.811050	8.498214e-51	-8.615850e-47
Msa0135980	Msa0411280	0.819218	1.303562e-52	-8.615850e-47
Msa0141550	Msa0411280	0.822304	2.544133e-53	-8.615850e-47
Msa0141670	Msa0411280	0.827813	1.271785e-54	-8.615850e-47
Msa0142870	Msa0411280	0.803089	4.116057e-49	-8.615850e-47
Msa0143970	Msa0411280	0.808073	3.705199e-50	-8.615850e-47
Msa0147550	Msa0411280	0.823666	1.225171e-53	-8.615850e-47
Msa0149500	Msa0411280	0.830818	2.370393e-55	-8.615850e-47
Msa0153640	Msa0411280	0.800725	1.259419e-48	-8.615850e-47
Msa0157020	Msa0411280	0.825457	4.639325e-54	-8.615850e-47
Msa0159750	Msa0411280	0.836722	7.921323e-57	-8.615850e-47
Msa0162030	Msa0411280	0.832794	7.711593e-56	-8.615850e-47
Msa0162050	Msa0411280	0.819935	8.942444e-53	-8.615850e-47
Msa0162070	Msa0411280	0.822135	2.785361e-53	-8.615850e-47
Msa0168100	Msa0411280	0.813332	2.700921e-51	-8.615850e-47
Msa0182640	Msa0411280	0.814569	1.441246e-51	-8.615850e-47
Msa0183610	Msa0411280	0.813064	3.092582e-51	-8.615850e-47
Msa0185390	Msa0411280	0.814868	1.237422e-51	-8.615850e-47
Msa0194570	Msa0411280	0.814612	1.409786e-51	-8.615850e-47
Msa0199730	Msa0411280	0.812332	4.471473e-51	-8.615850e-47
Msa0200970	Msa0411280	0.805586	1.242685e-49	-8.615850e-47
Msa0203180	Msa0411280	0.811063	8.441185e-51	-8.615850e-47
Msa0206940	Msa0411280	0.807226	5.606226e-50	-8.615850e-47
Msa0207000	Msa0411280	0.805922	1.056503e-49	-8.615850e-47
Msa0207180	Msa0411280	0.805090	1.578431e-49	-8.615850e-47
Msa0208630	Msa0411280	0.818289	2.118859e-52	-8.615850e-47
Msa0213080	Msa0411280	0.868278	7.353411e-66	-8.615850e-47
Msa0217470	Msa0411280	0.828748	7.566259e-55	-8.615850e-47
Msa0223100	Msa0411280	0.801356	9.360316e-49	-8.615850e-47
Msa0223290	Msa0411280	0.804093	2.549113e-49	-8.615850e-47
Msa0227500	Msa0411280	0.808091	3.672635e-50	-8.615850e-47
Msa0235550	Msa0411280	0.803654	3.143639e-49	-8.615850e-47
Msa0371610	Msa0411280	0.810901	9.155863e-51	-8.615850e-47
Msa0376510	Msa0411280	0.818979	1.477439e-52	-8.615850e-47
Msa0387790	Msa0411280	0.813783	2.149583e-51	-8.615850e-47
Msa0389310	Msa0411280	0.802728	4.889396e-49	-8.615850e-47
Msa0401330	Msa0411280	0.828527	8.556409e-55	-8.615850e-47
Msa0409820	Msa0411280	0.808476	3.039413e-50	-8.615850e-47
Msa0411280	Msa0413180	0.807136	5.856873e-50	-8.615850e-47
Msa0411280	Msa0413740	0.837987	3.757595e-57	-8.615850e-47
Msa0411280	Msa0417150	0.806822	6.825588e-50	-8.615850e-47
Msa0411280	Msa0420070	0.801683	8.021961e-49	-8.615850e-47
Msa0411280	Msa0425050	0.805532	1.275550e-49	-8.615850e-47
Msa0411280	Msa0432680	0.800341	1.508327e-48	-8.615850e-47
Msa0411280	Msa0436460	0.809843	1.548629e-50	-8.615850e-47
Msa0411280	Msa0442880	0.804511	2.085429e-49	-8.615850e-47
Msa0411280	Msa0448080	0.821460	3.990731e-53	-8.615850e-47
Msa0411280	Msa0458110	0.800115	1.676433e-48	-8.615850e-47
Msa0411280	Msa0458790	0.817489	3.210794e-52	-8.615850e-47
Msa0411280	Msa0466100	0.800392	1.472735e-48	-8.615850e-47
Msa0411280	Msa0467800	0.800394	1.471006e-48	-8.615850e-47
Msa0411280	Msa0467880	0.800934	1.141528e-48	-8.615850e-47
Msa0411280	Msa0473530	0.813467	2.522249e-51	-8.615850e-47
Msa0411280	Msa0480320	0.816869	4.426633e-52	-8.615850e-47
Msa0411280	Msa0484690	0.847862	8.837569e-60	-8.615850e-47
Msa0411280	Msa0490300	0.824997	5.959965e-54	-8.615850e-47
Msa0411280	Msa0490350	0.828453	8.914824e-55	-8.615850e-47
Msa0411280	Msa0498830	0.801783	7.649057e-49	-8.615850e-47
Msa0411280	Msa0502500	0.807562	4.758139e-50	-8.615850e-47
Msa0411280	Msa0504730	0.802213	6.240717e-49	-8.615850e-47
Msa0411280	Msa0505390	0.835017	2.143061e-56	-8.615850e-47
Msa0411280	Msa0508200	0.832828	7.566589e-56	-8.615850e-47
Msa0411280	Msa0512310	0.809958	1.463143e-50	-8.615850e-47
Msa0411280	Msa0516450	0.804196	2.425970e-49	-8.615850e-47
Msa0411280	Msa0524050	0.817131	3.866782e-52	-8.615850e-47
Msa0411280	Msa0524090	0.803866	2.841532e-49	-8.615850e-47
Msa0411280	Msa0524120	0.823968	1.040577e-53	-8.615850e-47
Msa0411280	Msa0528410	0.815491	8.999110e-52	-8.615850e-47
Msa0411280	Msa0528740	0.800748	1.246272e-48	-8.615850e-47
Msa0411280	Msa0530930	0.812923	3.319905e-51	-8.615850e-47
Msa0411280	Msa0532840	0.825611	4.264376e-54	-8.615850e-47
Msa0411280	Msa0533010	0.825765	3.922343e-54	-8.615850e-47
Msa0411280	Msa0535030	0.805267	1.449677e-49	-8.615850e-47
Msa0411280	Msa0535060	0.805130	1.548926e-49	-8.615850e-47
Msa0411280	Msa0540320	0.818090	2.349994e-52	-8.615850e-47
Msa0411280	Msa0542040	0.825012	5.911505e-54	-8.615850e-47
Msa0411280	Msa0546380	0.833274	5.858884e-56	-8.615850e-47
Msa0411280	Msa0546740	0.816093	6.606538e-52	-8.615850e-47
Msa0411280	Msa0549740	0.829335	5.454260e-55	-8.615850e-47
Msa0411280	Msa0550110	0.802715	4.917924e-49	-8.615850e-47
Msa0411280	Msa0564930	0.816135	6.463604e-52	-8.615850e-47
Msa0411280	Msa0568610	0.801213	1.001313e-48	-8.615850e-47
Msa0411280	Msa0574170	0.816756	4.692290e-52	-8.615850e-47
Msa0411280	Msa0575250	0.808037	3.769989e-50	-8.615850e-47
Msa0411280	Msa0576420	0.822207	2.679999e-53	-8.615850e-47
Msa0411280	Msa0581340	0.821026	5.023733e-53	-8.615850e-47
Msa0411280	Msa0582110	0.822013	2.971912e-53	-8.615850e-47
Msa0411280	Msa0587900	0.805999	1.017906e-49	-8.615850e-47
Msa0411280	Msa0596100	0.826239	3.025340e-54	-8.615850e-47
Msa0411280	Msa0598250	0.841869	3.656837e-58	-8.615850e-47
Msa0411280	Msa0605620	0.826940	2.058527e-54	-8.615850e-47
Msa0411280	Msa0606060	0.840861	6.736822e-58	-8.615850e-47
Msa0411280	Msa0607200	0.801237	9.899110e-49	-8.615850e-47
Msa0411280	Msa0607280	0.805952	1.040968e-49	-8.615850e-47
Msa0411280	Msa0609990	0.801449	8.957274e-49	-8.615850e-47
Msa0411280	Msa0617830	0.807329	5.331298e-50	-8.615850e-47
Msa0411280	Msa0619330	0.862195	6.018589e-64	-8.615850e-47
Msa0411280	Msa0619980	0.824242	8.973222e-54	-8.615850e-47
Msa0411280	Msa0620640	0.852625	4.083232e-61	-8.615850e-47
Msa0411280	Msa0621890	0.816733	4.748472e-52	-8.615850e-47
Msa0411280	Msa0622390	0.832218	1.071826e-55	-8.615850e-47
Msa0411280	Msa0624730	0.820540	6.499909e-53	-8.615850e-47
Msa0411280	Msa0628060	0.816576	5.150136e-52	-8.615850e-47
Msa0411280	Msa0642650	0.803164	3.971959e-49	-8.615850e-47
Msa0411280	Msa0646390	0.810908	9.123903e-51	-8.615850e-47
Msa0411280	Msa0647000	0.842393	2.658085e-58	-8.615850e-47
Msa0411280	Msa0651400	0.803018	4.257545e-49	-8.615850e-47
Msa0411280	Msa0654060	0.804704	1.901526e-49	-8.615850e-47
Msa0411280	Msa0656270	0.800885	1.168112e-48	-8.615850e-47
Msa0411280	Msa0656680	0.817142	3.843404e-52	-8.615850e-47
Msa0411280	Msa0657670	0.804895	1.734085e-49	-8.615850e-47
Msa0411280	Msa0659040	0.806984	6.308097e-50	-8.615850e-47
Msa0411280	Msa0660820	0.811329	7.393180e-51	-8.615850e-47
Msa0411280	Msa0663090	0.847438	1.156191e-59	-8.615850e-47
Msa0411280	Msa0667970	0.813699	2.242163e-51	-8.615850e-47
Msa0411280	Msa0669850	0.802848	4.618009e-49	-8.615850e-47
Msa0411280	Msa0674220	0.832463	9.319568e-56	-8.615850e-47
Msa0411280	Msa0674300	0.816597	5.093412e-52	-8.615850e-47
Msa0411280	Msa0681890	0.812582	3.942555e-51	-8.615850e-47
Msa0411280	Msa0686610	0.839841	1.244529e-57	-8.615850e-47
Msa0411280	Msa0690350	0.819666	1.030556e-52	-8.615850e-47
Msa0411280	Msa0700070	0.804658	1.943910e-49	-8.615850e-47
Msa0411280	Msa0705440	0.801558	8.507906e-49	-8.615850e-47
Msa0411280	Msa0706370	0.802810	4.701669e-49	-8.615850e-47
Msa0411280	Msa0706380	0.804576	2.021920e-49	-8.615850e-47
Msa0411280	Msa0707780	0.833615	4.818578e-56	-8.615850e-47
Msa0411280	Msa0709480	0.820259	7.538737e-53	-8.615850e-47
Msa0411280	Msa0714600	0.812620	3.868279e-51	-8.615850e-47
Msa0411280	Msa0719340	0.837839	4.102207e-57	-8.615850e-47
Msa0411280	Msa0720270	0.805482	1.306757e-49	-8.615850e-47
Msa0411280	Msa0724050	0.827000	1.992016e-54	-8.615850e-47
Msa0411280	Msa0726610	0.828372	9.324842e-55	-8.615850e-47
Msa0411280	Msa0730180	0.818586	1.814147e-52	-8.615850e-47
Msa0411280	Msa0733000	0.844390	7.787558e-59	-8.615850e-47
Msa0411280	Msa0743640	0.834215	3.409193e-56	-8.615850e-47
Msa0411280	Msa0744450	0.801967	7.011883e-49	-8.615850e-47
Msa0411280	Msa0756480	0.831637	1.491069e-55	-8.615850e-47
Msa0411280	Msa0760890	0.813874	2.052552e-51	-8.615850e-47
Msa0411280	Msa0763880	0.822373	2.452724e-53	-8.615850e-47
Msa0411280	Msa0763910	0.811527	6.696408e-51	-8.615850e-47
Msa0411280	Msa0770430	0.827837	1.255038e-54	-8.615850e-47
Msa0411280	Msa0772150	0.831156	1.958344e-55	-8.615850e-47
Msa0411280	Msa0780140	0.800085	1.700849e-48	-8.615850e-47
Msa0411280	Msa0787720	0.814668	1.370044e-51	-8.615850e-47
Msa0411280	Msa0790830	0.805333	1.403983e-49	-8.615850e-47
Msa0411280	Msa0792510	0.835458	1.659000e-56	-8.615850e-47
Msa0411280	Msa0807730	0.811446	6.973099e-51	-8.615850e-47
Msa0411280	Msa0811510	0.836611	8.453919e-57	-8.615850e-47
Msa0411280	Msa0812660	0.801042	1.085243e-48	-8.615850e-47
Msa0411280	Msa0835510	0.812041	5.176528e-51	-8.615850e-47
Msa0411280	Msa0847200	0.808771	2.629064e-50	-8.615850e-47
Msa0411280	Msa0851740	0.847245	1.306164e-59	-8.615850e-47
Msa0411280	Msa0854570	0.820709	5.942942e-53	-8.615850e-47
Msa0411280	Msa0863250	0.801393	9.195378e-49	-8.615850e-47
Msa0411280	Msa0863760	0.834226	3.387993e-56	-8.615850e-47
Msa0411280	Msa0864950	0.819199	1.316472e-52	-8.615850e-47
Msa0411280	Msa0870620	0.832776	7.793249e-56	-8.615850e-47
Msa0411280	Msa0870630	0.815658	8.258047e-52	-8.615850e-47
Msa0411280	Msa0872660	0.831439	1.668447e-55	-8.615850e-47
Msa0411280	Msa0887070	0.808057	3.733956e-50	-8.615850e-47
Msa0411280	Msa0890250	0.822919	1.830612e-53	-8.615850e-47
Msa0411280	Msa0903730	0.826382	2.798122e-54	-8.615850e-47
Msa0411280	Msa0907700	0.818502	1.896175e-52	-8.615850e-47
Msa0411280	Msa0909710	0.826143	3.189727e-54	-8.615850e-47
Msa0411280	Msa0925160	0.822998	1.754330e-53	-8.615850e-47
Msa0411280	Msa0934830	0.845287	4.462536e-59	-8.615850e-47
Msa0411280	Msa0936430	0.804773	1.839205e-49	-8.615850e-47
Msa0411280	Msa0937940	0.817487	3.214630e-52	-8.615850e-47
Msa0411280	Msa0946320	0.832234	1.061615e-55	-8.615850e-47
Msa0411280	Msa0950620	0.802108	6.558708e-49	-8.615850e-47
Msa0411280	Msa0955260	0.805992	1.021309e-49	-8.615850e-47
Msa0411280	Msa0958020	0.818291	2.116694e-52	-8.615850e-47
Msa0411280	Msa0964680	0.817206	3.718920e-52	-8.615850e-47
Msa0411280	Msa0971860	0.843218	1.603965e-58	-8.615850e-47
Msa0411280	Msa0973230	0.820576	6.375667e-53	-8.615850e-47
Msa0411280	Msa0975080	0.837237	5.851298e-57	-8.615850e-47
Msa0411280	Msa0980440	0.801397	9.178998e-49	-8.615850e-47
Msa0411280	Msa0981740	0.817263	3.610643e-52	-8.615850e-47
Msa0411280	Msa0981770	0.808305	3.306204e-50	-8.615850e-47
Msa0411280	Msa0990520	0.805452	1.326010e-49	-8.615850e-47
Msa0411280	Msa1010140	0.806614	7.551902e-50	-8.615850e-47
Msa0411280	Msa1014350	0.809323	2.002680e-50	-8.615850e-47
Msa0411280	Msa1015060	0.821335	4.265108e-53	-8.615850e-47
Msa0411280	Msa1018790	0.811508	6.759029e-51	-8.615850e-47
Msa0411280	Msa1029320	0.819281	1.261012e-52	-8.615850e-47
Msa0411280	Msa1036390	0.800951	1.132454e-48	-8.615850e-47
Msa0411280	Msa1038050	0.815160	1.065787e-51	-8.615850e-47
Msa0411280	Msa1038320	0.812821	3.496316e-51	-8.615850e-47
Msa0411280	Msa1044040	0.834828	2.392033e-56	-8.615850e-47
Msa0411280	Msa1051680	0.808722	2.693977e-50	-8.615850e-47
Msa0411280	Msa1055360	0.816456	5.479466e-52	-8.615850e-47
Msa0411280	Msa1056640	0.826656	2.406970e-54	-8.615850e-47
Msa0411280	Msa1058010	0.803805	2.925928e-49	-8.615850e-47
Msa0411280	Msa1069300	0.810977	8.812267e-51	-8.615850e-47
Msa0411280	Msa1072350	0.818478	1.920097e-52	-8.615850e-47
Msa0411280	Msa1076680	0.808680	2.749934e-50	-8.615850e-47
Msa0411280	Msa1080460	0.816053	6.743736e-52	-8.615850e-47
Msa0411280	Msa1081700	0.802866	4.578422e-49	-8.615850e-47
Msa0411280	Msa1081850	0.803167	3.967542e-49	-8.615850e-47
Msa0411280	Msa1084490	0.803252	3.809595e-49	-8.615850e-47
Msa0411280	Msa1092820	0.813505	2.473652e-51	-8.615850e-47
Msa0411280	Msa1093390	0.821011	5.065938e-53	-8.615850e-47
Msa0411280	Msa1097210	0.822816	1.934300e-53	-8.615850e-47
Msa0411280	Msa1097380	0.859070	5.333730e-63	-8.615850e-47
Msa0411280	Msa1100490	0.825221	5.277160e-54	-8.615850e-47
Msa0411280	Msa1102540	0.807728	4.387143e-50	-8.615850e-47
Msa0411280	Msa1118140	0.826848	2.166184e-54	-8.615850e-47
Msa0411280	Msa1122510	0.827828	1.261067e-54	-8.615850e-47
Msa0411280	Msa1125780	0.828741	7.593679e-55	-8.615850e-47
Msa0411280	Msa1125950	0.828327	9.563387e-55	-8.615850e-47
Msa0411280	Msa1130650	0.803499	3.386065e-49	-8.615850e-47
Msa0411280	Msa1135870	0.802349	5.853207e-49	-8.615850e-47
Msa0411280	Msa1140010	0.814379	1.587699e-51	-8.615850e-47
Msa0411280	Msa1143630	0.803070	4.154203e-49	-8.615850e-47
Msa0411280	Msa1159100	0.810183	1.308464e-50	-8.615850e-47
Msa0411280	Msa1159360	0.835196	1.932009e-56	-8.615850e-47
Msa0411280	Msa1161160	0.809499	1.835664e-50	-8.615850e-47
Msa0411280	Msa1161760	0.805597	1.236426e-49	-8.615850e-47
Msa0411280	Msa1166180	0.818802	1.621107e-52	-8.615850e-47
Msa0411280	Msa1166280	0.811324	7.413013e-51	-8.615850e-47
Msa0411280	Msa1166970	0.826317	2.899648e-54	-8.615850e-47
Msa0411280	Msa1171340	0.830875	2.295588e-55	-8.615850e-47
Msa0411280	Msa1171690	0.810659	1.032498e-50	-8.615850e-47
Msa0411280	Msa1184580	0.817180	3.770220e-52	-8.615850e-47
Msa0411280	Msa1220230	0.800263	1.564508e-48	-8.615850e-47
Msa0411280	Msa1221260	0.819899	9.112591e-53	-8.615850e-47
Msa0411280	Msa1226600	0.826193	3.102709e-54	-8.615850e-47
Msa0411280	Msa1238490	0.806416	8.312360e-50	-8.615850e-47
Msa0411280	Msa1238700	0.835634	1.496658e-56	-8.615850e-47
Msa0411280	Msa1250670	0.803206	3.893123e-49	-8.615850e-47
Msa0411280	Msa1254770	0.803737	3.021965e-49	-8.615850e-47
Msa0411280	Msa1262310	0.820753	5.806068e-53	-8.615850e-47
Msa0411280	Msa1264560	0.810247	1.267308e-50	-8.615850e-47
Msa0411280	Msa1265960	0.816504	5.344288e-52	-8.615850e-47
Msa0411280	Msa1280130	0.831539	1.576395e-55	-8.615850e-47
Msa0411280	Msa1302150	0.801481	8.823738e-49	-8.615850e-47
Msa0411280	Msa1309100	0.801118	1.046899e-48	-8.615850e-47
Msa0411280	Msa1316170	0.804711	1.894499e-49	-8.615850e-47
Msa0411280	Msa1319580	0.800418	1.454671e-48	-8.615850e-47
Msa0411280	Msa1325980	0.819412	1.177466e-52	-8.615850e-47
Msa0411280	Msa1326000	0.832432	9.483301e-56	-8.615850e-47
Msa0411280	Msa1329990	0.805078	1.588164e-49	-8.615850e-47
Msa0411280	Msa1337340	0.803197	3.910839e-49	-8.615850e-47
Msa0411280	Msa1343340	0.802128	6.499143e-49	-8.615850e-47
Msa0411280	Msa1347620	0.802612	5.165585e-49	-8.615850e-47
Msa0411280	Msa1354040	0.804600	1.998307e-49	-8.615850e-47
Msa0411280	Msa1366620	0.800071	1.711385e-48	-8.615850e-47
Msa0411280	Msa1373950	0.832057	1.174372e-55	-8.615850e-47
Msa0411280	Msa1374440	0.850093	2.122059e-60	-8.615850e-47
Msa0411280	Msa1379990	0.826906	2.098016e-54	-8.615850e-47
Msa0411280	Msa1381130	0.807692	4.464480e-50	-8.615850e-47
Msa0411280	Msa1384320	0.810713	1.005202e-50	-8.615850e-47
Msa0411280	Msa1385620	0.808497	3.008814e-50	-8.615850e-47
Msa0411280	Msa1385900	0.813074	3.077006e-51	-8.615850e-47
Msa0411280	Msa1405770	0.807772	4.293433e-50	-8.615850e-47
Msa0411280	Msa1412080	0.808503	3.000261e-50	-8.615850e-47
Msa0411280	Msa1418200	0.852724	3.824951e-61	-8.615850e-47
Msa0411280	Msa1419010	0.828339	9.499886e-55	-8.615850e-47
Msa0411280	Msa1422270	0.840162	1.026335e-57	-8.615850e-47
Msa0411280	Msa1428440	0.807895	4.042649e-50	-8.615850e-47
Msa0411280	Msa1431000	0.814650	1.382804e-51	-8.615850e-47
Msa0411280	Msa1435040	0.818779	1.639993e-52	-8.615850e-47
Msa0411280	Msa1435470	0.825438	4.687471e-54	-8.615850e-47
Msa0411280	Msa1439230	0.801137	1.037482e-48	-8.615850e-47
Msa0411280	Msa1440180	0.844413	7.678126e-59	-8.615850e-47
Msa0411280	Msa1449740	0.845045	5.186925e-59	-8.615850e-47
Msa0411280	Msa1456810	0.837022	6.641974e-57	-8.615850e-47
Msa0411280	Msa1458920	0.827743	1.321687e-54	-8.615850e-47
Msa0411280	Msa1464560	0.840274	9.598160e-58	-8.615850e-47
Msa0242280	Msa0411280	0.800272	1.558179e-48	-8.615850e-47
Msa0252180	Msa0411280	0.835850	1.319951e-56	-8.615850e-47
Msa0253370	Msa0411280	0.801573	8.447306e-49	-8.615850e-47
Msa0257310	Msa0411280	0.845203	4.701528e-59	-8.615850e-47
Msa0280490	Msa0411280	0.820975	5.161092e-53	-8.615850e-47
Msa0284780	Msa0411280	0.804649	1.952131e-49	-8.615850e-47
Msa0284870	Msa0411280	0.845510	3.883767e-59	-8.615850e-47
Msa0292180	Msa0411280	0.819109	1.380418e-52	-8.615850e-47
Msa0296610	Msa0411280	0.838652	2.531780e-57	-8.615850e-47
Msa0296760	Msa0411280	0.802287	6.025658e-49	-8.615850e-47
Msa0298940	Msa0411280	0.823190	1.582959e-53	-8.615850e-47
Msa0298970	Msa0411280	0.828018	1.135191e-54	-8.615850e-47
Msa0314790	Msa0411280	0.803161	3.978849e-49	-8.615850e-47
Msa0315480	Msa0411280	0.808247	3.402117e-50	-8.615850e-47
Msa0323630	Msa0411280	0.804667	1.935304e-49	-8.615850e-47
Msa0334980	Msa0411280	0.818162	2.263288e-52	-8.615850e-47
Msa0357380	Msa0411280	0.822809	1.941771e-53	-8.615850e-47
Msa0357390	Msa0411280	0.807928	3.976581e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0411280	MtrunA17_Chr3g0102541	92.308	78	6	0	3	80	658	735	2.46e-42	145
Msa0411280	MtrunA17_Chr3g0102531	84.810	79	9	1	3	81	657	732	3.68e-38	134
Msa0411280	MtrunA17_Chr3g0102551	51.282	78	37	1	1	78	661	737	2.98e-20	82.8
Msa0411280	MtrunA17_Chr1g0186381	35.802	81	46	2	1	80	662	737	7.06e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0411280	AT1G55850.1	44.000	75	39	1	1	75	653	724	1.09e-14	67.4

Find 11 sgRNAs with CRISPR-Local

Find 16 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTTATCTTTCCTTAGAAAA+AGG	0.222725	3_2:-53486578	None:intergenic
AGCAAGTGTTACATTATTTG+AGG	0.419258	3_2:+53486491	Msa0411280:CDS
ATCAATATACCTATTTATCA+AGG	0.451343	3_2:+53486555	Msa0411280:CDS
TTTAGCTAAGGGCACTATAG+AGG	0.499956	3_2:-53486659	None:intergenic
TCTTGTTGGGATGTTGCTAA+AGG	0.509119	3_2:+53486452	Msa0411280:CDS
TGCAATTACATCAACAACAT+TGG	0.535135	3_2:+53486620	Msa0411280:CDS
CAAGGACATGGATTTAGCTA+AGG	0.541799	3_2:-53486671	None:intergenic
GATGTAATTGCAACAGACCT+TGG	0.567343	3_2:-53486609	None:intergenic
TGTTGGGATGTTGCTAAAGG+AGG	0.567645	3_2:+53486455	Msa0411280:CDS
AAGGACATGGATTTAGCTAA+GGG	0.609717	3_2:-53486670	None:intergenic
AAGATAAGGGAAGATTGCCA+AGG	0.672929	3_2:+53486592	Msa0411280:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCAATATACCTATTTATCA+AGG	+	chr3_2:53486555-53486574	Msa0411280:CDS	20.0%
!!!	TGAATTTGTTTTGTCTTGTT+GGG	+	chr3_2:53486439-53486458	Msa0411280:CDS	25.0%
!!	TTATTGCAAGTTTTACTAAG+TGG	+	chr3_2:53486519-53486538	Msa0411280:CDS	25.0%
!!!	CTTTTTCTAAGGAAAGATAA+GGG	+	chr3_2:53486579-53486598	Msa0411280:CDS	25.0%
!!!	CTGAATTTGTTTTGTCTTGT+TGG	+	chr3_2:53486438-53486457	Msa0411280:CDS	30.0%
	AGCAAGTGTTACATTATTTG+AGG	+	chr3_2:53486491-53486510	Msa0411280:CDS	30.0%
!	AGTTTTACTAAGTGGTGTTT+TGG	+	chr3_2:53486527-53486546	Msa0411280:CDS	30.0%
	AGAAAAAGGCCTTGATAAAT+AGG	-	chr3_2:53486567-53486586	None:intergenic	30.0%
!	TTTATCAAGGCCTTTTTCTA+AGG	+	chr3_2:53486568-53486587	Msa0411280:CDS	30.0%
	CCTTATCTTTCCTTAGAAAA+AGG	-	chr3_2:53486581-53486600	None:intergenic	30.0%
!!	CCTTTTTCTAAGGAAAGATA+AGG	+	chr3_2:53486578-53486597	Msa0411280:CDS	30.0%
	TGCAATTACATCAACAACAT+TGG	+	chr3_2:53486620-53486639	Msa0411280:CDS	30.0%
	TCTTGTTGGGATGTTGCTAA+AGG	+	chr3_2:53486452-53486471	Msa0411280:CDS	40.0%
	AAGATAAGGGAAGATTGCCA+AGG	+	chr3_2:53486592-53486611	Msa0411280:CDS	40.0%
	GATGTAATTGCAACAGACCT+TGG	-	chr3_2:53486612-53486631	None:intergenic	40.0%
	TGTTGGGATGTTGCTAAAGG+AGG	+	chr3_2:53486455-53486474	Msa0411280:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_2	gene	53486435	53486680	53486435	ID=Msa0411280;Name=Msa0411280
chr3_2	mRNA	53486435	53486680	53486435	ID=Msa0411280-mRNA-1;Parent=Msa0411280;Name=Msa0411280-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|81
chr3_2	exon	53486435	53486680	53486435	ID=Msa0411280-mRNA-1:exon:10687;Parent=Msa0411280-mRNA-1
chr3_2	CDS	53486435	53486680	53486435	ID=Msa0411280-mRNA-1:cds;Parent=Msa0411280-mRNA-1

Gene Sequence	>Msa0411280 ATGCTGAATTTGTTTTGTCTTGTTGGGATGTTGCTAAAGGAGGTTGTGTTAAGTAGAGCAAGTGTTACATTATTTGAGGCAATGTTATTGCAAGTTTTACTAAGTGGTGTTTTGGTTCTTATCAATATACCTATTTATCAAGGCCTTTTTCTAAGGAAAGATAAGGGAAGATTGCCAAGGTCTGTTGCAATTACATCAACAACATTGGCTCTAAGTGCATGTGTCCTCTATAGTGCCCTTAGCTAA
Protein sequence	>Msa0411280 MLNLFCLVGMLLKEVVLSRASVTLFEAMLLQVLLSGVLVLINIPIYQGLFLRKDKGRLPRSVAITSTTLALSACVLYSALS*