AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1446780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1446780 MtrunA17_Chr7g0274541 98.617 723 9 1 1 723 1 722 0.0 1476
Msa1446780 MtrunA17_Chr6g0459461 82.301 113 18 1 1 111 91 203 2.04e-55 189
Msa1446780 MtrunA17_Chr6g0459471 93.651 63 4 0 653 715 1 63 3.95e-34 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1446780 AT2G34970.1 62.983 724 247 7 1 714 1 713 0.0 915
Msa1446780 AT4G18300.1 58.564 724 267 13 1 714 1 701 0.0 819
Msa1446780 AT3G02270.1 55.556 729 260 14 1 719 1 675 0.0 753

Find 187 sgRNAs with CRISPR-Local

Find 712 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGCCTCCTTCACATTT+TGG 0.127019 tig0031493:-27638 None:intergenic
GTACCAGATGTTATGAATTT+TGG 0.128972 tig0031493:+24036 Msa1446780:CDS
CTTCGTGTTCTTGCCAATTT+TGG 0.166436 tig0031493:-24479 None:intergenic
AAGATACTCACTTGAATTAA+TGG 0.203717 tig0031493:-30650 None:intergenic
GGAAGTATTCTTCCACCTTC+TGG 0.225473 tig0031493:+27755 Msa1446780:CDS
TATTACTGAAGATAAAATTT+TGG 0.227298 tig0031493:+27688 Msa1446780:CDS
AGAAACTGCTTCTGAATTAT+TGG 0.228648 tig0031493:+26651 Msa1446780:CDS
GCTTGTTCGTGTTCCGTTAC+AGG 0.244182 tig0031493:+19669 Msa1446780:CDS
GAAGCAGGTGATTAACTATT+TGG 0.248892 tig0031493:+21049 Msa1446780:CDS
ATAGGATCTGGCACCAAAAT+TGG 0.250898 tig0031493:+24466 Msa1446780:CDS
GTTGGCCCATTCTCTGTTAT+AGG 0.251239 tig0031493:+24448 Msa1446780:CDS
ATAGTTGTTACAGTAAAATT+AGG 0.269459 tig0031493:-21095 None:intergenic
AGTCAAAATTGTCTGTAAAT+AGG 0.286591 tig0031493:-23411 None:intergenic
ATTTAGAGAAACACCAGTTT+TGG 0.292797 tig0031493:+30979 Msa1446780:three_prime_UTR
TTATATTTCTTTCAGATAAT+GGG 0.293378 tig0031493:+23901 Msa1446780:intron
TTCGTCTTCATCGTCTTCTT+CGG 0.298425 tig0031493:-30801 None:intergenic
TGTACTTACCAAGTGGAAAA+AGG 0.300815 tig0031493:+29603 Msa1446780:CDS
TACAAAAGTTGCTTGGTATT+AGG 0.305309 tig0031493:-22815 None:intergenic
AGTAGAGATACTTGTGAATA+AGG 0.319455 tig0031493:-25142 None:intergenic
AAAGCTCACCAGCTGAACTA+TGG 0.322453 tig0031493:-28836 None:intergenic
ATAATAAAGCCTATTTCTAT+TGG 0.322638 tig0031493:-31051 None:intergenic
AAAATTTGAAGAAATGTGTT+TGG 0.336103 tig0031493:+29921 Msa1446780:CDS
TTGGTGGGGCTGGTTATGTT+TGG 0.339452 tig0031493:+27615 Msa1446780:CDS
TCGTCTTCATCGTCTTCTTC+GGG 0.349579 tig0031493:-30800 None:intergenic
GTGATTGAAGAAGAGTCTAT+AGG 0.352948 tig0031493:-19208 None:intergenic
TCATGTTTCCAGGTTGTAGT+TGG 0.360879 tig0031493:+25100 Msa1446780:intron
TCATCGTCATCTGAATCATT+AGG 0.362858 tig0031493:-27794 None:intergenic
ACATAGAGGGATGCTATATA+TGG 0.363209 tig0031493:+24551 Msa1446780:CDS
CCATTCTCTGTTATAGGATC+TGG 0.364215 tig0031493:+24454 Msa1446780:CDS
TGATTGAAGAAGAGTCTATA+GGG 0.373912 tig0031493:-19207 None:intergenic
AAGTTCACAGCCATCTTCTA+TGG 0.377775 tig0031493:-24584 None:intergenic
GAAGTATTCTTCCACCTTCT+GGG 0.385133 tig0031493:+27756 Msa1446780:CDS
GTCAATGTGTAATTTATCAT+TGG 0.388585 tig0031493:-20972 None:intergenic
TAAAATACATGACCCAAAAC+TGG 0.392182 tig0031493:-30992 None:intergenic
GTCGGAGTAGGATGCAAAAT+CGG 0.392986 tig0031493:+24517 Msa1446780:CDS
GTAAATAGGCTAAGGACTTC+CGG 0.402526 tig0031493:-23397 None:intergenic
TGTCGAGGTGCTGTCATCTT+GGG 0.403227 tig0031493:+30861 Msa1446780:three_prime_UTR
AGTTGAATGGCAAAAGGGAT+TGG 0.406087 tig0031493:-31125 None:intergenic
GAAAGCTATGGAAGATGAAC+TGG 0.408041 tig0031493:+27718 Msa1446780:CDS
CCGGAACAAACCTCTGAAGC+AGG 0.410804 tig0031493:-26688 None:intergenic
AAGAGAAGCGGCGGTGGCAG+AGG 0.418493 tig0031493:-18913 None:intergenic
TCATCTGAATCATTAGGATT+AGG 0.423207 tig0031493:-27788 None:intergenic
ATGGCTCATTTAAAGTTGAA+TGG 0.431165 tig0031493:-31138 None:intergenic
ATTTAAAGTTGAATGGCAAA+AGG 0.433487 tig0031493:-31131 None:intergenic
TTACGAAATGGAAGCGCGAT+TGG 0.440990 tig0031493:-19308 None:intergenic
AGAAAGAAATTGAGAAAGCC+TGG 0.442920 tig0031493:+19153 Msa1446780:five_prime_UTR
TACGAAATGGAAGCGCGATT+GGG 0.445237 tig0031493:-19307 None:intergenic
CTGCTGTGCTCATGCGAAGC+AGG 0.446859 tig0031493:+21034 Msa1446780:CDS
TTGTCGAGGTGCTGTCATCT+TGG 0.447642 tig0031493:+30860 Msa1446780:three_prime_UTR
AGAGTCTATAGGGAGGTGTT+TGG 0.448982 tig0031493:-19197 None:intergenic
CATGTTTCCAGGTTGTAGTT+GGG 0.449794 tig0031493:+25101 Msa1446780:intron
TTGCCAAAATTCATAACATC+TGG 0.452105 tig0031493:-24039 None:intergenic
CAAGCACAATCAGCTGTTGT+TGG 0.455052 tig0031493:+24430 Msa1446780:CDS
TCGTCGCTATCTTCCTCAAC+CGG 0.456281 tig0031493:-25172 None:intergenic
CCAGATCCTATAACAGAGAA+TGG 0.458173 tig0031493:-24454 None:intergenic
CTCTCTGCACCATGACAAGC+AGG 0.458401 tig0031493:+22913 Msa1446780:CDS
TCGGAGTAGGATGCAAAATC+GGG 0.464129 tig0031493:+24518 Msa1446780:CDS
AGGAAGAGAAGTGACGGTGG+AGG 0.468544 tig0031493:-18969 None:intergenic
CTTGAATTAATGGTTGAGCT+TGG 0.472089 tig0031493:-30640 None:intergenic
AATTGACTTCTAAAGTCAAA+TGG 0.473008 tig0031493:-27974 None:intergenic
TAATGACCATGGTTATTAAA+CGG 0.473067 tig0031493:+22726 Msa1446780:CDS
ATATTTATTACCAAGAAAAT+GGG 0.473836 tig0031493:+19601 Msa1446780:intron
TTTCCAGGTTGTAGTTGGGC+AGG 0.474402 tig0031493:+25105 Msa1446780:intron
GCAAGGATATAATTCATAGA+TGG 0.481776 tig0031493:+24001 Msa1446780:CDS
AAGCTCACCAGCTGAACTAT+GGG 0.483922 tig0031493:-28835 None:intergenic
TTTAAAGTTGAATGGCAAAA+GGG 0.489246 tig0031493:-31130 None:intergenic
TCTACTACAGCAGCCGGTTG+AGG 0.489304 tig0031493:+25159 Msa1446780:CDS
TATGAAATCAGGATCTGCTC+TGG 0.490344 tig0031493:+24636 Msa1446780:CDS
TTTGGAGGCAATGAAAGCTA+TGG 0.494317 tig0031493:+27706 Msa1446780:CDS
GACTTGCCCCATAGTTCAGC+TGG 0.494761 tig0031493:+28828 Msa1446780:CDS
TTAAATTCCGTCGTCGGAGT+AGG 0.496201 tig0031493:+24505 Msa1446780:CDS
TGAGAAGAAAGGCGCGGATG+AGG 0.496216 tig0031493:+30598 Msa1446780:CDS
GCAGCAAGAGAGAGAGAAAG+AGG 0.502929 tig0031493:-19234 None:intergenic
GATAAAGCAGACTTCTCAAA+AGG 0.505881 tig0031493:+22845 Msa1446780:CDS
AAGATAGCTGCTGATTGTGC+TGG 0.506462 tig0031493:+28771 Msa1446780:CDS
AGAAGCGGTGACAGCAAAAG+AGG 0.507784 tig0031493:-18989 None:intergenic
TTGGGGCGTTCAAGAGTGAT+AGG 0.508515 tig0031493:-19730 None:intergenic
CAAGGAATATACCGTGGCTC+GGG 0.510114 tig0031493:+24084 Msa1446780:CDS
TTACAGTATCTCCACTGATA+AGG 0.511096 tig0031493:-22637 None:intergenic
CTTATCCACTGTGCTGGTGA+TGG 0.511806 tig0031493:-26620 None:intergenic
TCAGGATCTGCTCTGGAACC+TGG 0.517246 tig0031493:+24643 Msa1446780:CDS
GGTGACAGAAAGTCTAGATC+TGG 0.519766 tig0031493:-19050 None:intergenic
CTCGTAATACAAAAGTTGCT+TGG 0.522774 tig0031493:-22822 None:intergenic
TCCGTTACAGGCGATTCTGT+TGG 0.523711 tig0031493:+19681 Msa1446780:CDS
AAGAGATGACTTTGACAAAG+AGG 0.524902 tig0031493:+27829 Msa1446780:CDS
TTTGCATCCTACTCCGACGA+CGG 0.525897 tig0031493:-24512 None:intergenic
TAGAAGATGGCTGTGAACTT+AGG 0.527350 tig0031493:+24587 Msa1446780:CDS
AGTTGGGAAGATGAGAAGAA+AGG 0.528430 tig0031493:+30587 Msa1446780:CDS
ATCTGACTTATCCACTGTGC+TGG 0.528457 tig0031493:-26626 None:intergenic
CGGTACCAAGTCGAGACTGA+TGG 0.534696 tig0031493:-22769 None:intergenic
AGTCGAGACTGATGGATAGC+TGG 0.535756 tig0031493:-22761 None:intergenic
CAAGAGAGAGAGAAAGAGGT+TGG 0.538438 tig0031493:-19230 None:intergenic
AGAGAAGCGGCGGTGGCAGA+GGG 0.538686 tig0031493:-18912 None:intergenic
CATAGAGGGATGCTATATAT+GGG 0.540737 tig0031493:+24552 Msa1446780:CDS
CAGATGAAGAGAAGCGGCGG+TGG 0.543483 tig0031493:-18919 None:intergenic
CACCGAAGAAAAGCGCTGCT+AGG 0.545842 tig0031493:+19626 Msa1446780:CDS
TCTGAATGATACGGACGAGC+AGG 0.546245 tig0031493:+29639 Msa1446780:CDS
AGAATCACACTTGAATTCAA+AGG 0.549859 tig0031493:-30916 None:intergenic
AAGGAGGCCATGAGGAAGAG+TGG 0.549988 tig0031493:+27648 Msa1446780:CDS
ACCGAAGAAAAGCGCTGCTA+GGG 0.550483 tig0031493:+19627 Msa1446780:CDS
AATTGTCTGTAAATAGGCTA+AGG 0.551876 tig0031493:-23405 None:intergenic
TCTCAAAATTGTGTCAGTGC+TGG 0.552524 tig0031493:+21122 Msa1446780:CDS
TGCATCCTATCTGAATGATA+CGG 0.553061 tig0031493:+29630 Msa1446780:CDS
AAGAATACCTTTGTGAACAA+TGG 0.554034 tig0031493:-29964 None:intergenic
ATCATTGGAACATTCGCCAA+TGG 0.555479 tig0031493:-20957 None:intergenic
AGGCATGCCATTGTATGTGA+GGG 0.557311 tig0031493:+24607 Msa1446780:CDS
CAGATCCTATAACAGAGAAT+GGG 0.557862 tig0031493:-24453 None:intergenic
AATGCCTCCACTCTTCCTCA+TGG 0.559030 tig0031493:-27655 None:intergenic
CAAAATGACGCCGAAGATGT+TGG 0.560588 tig0031493:-23435 None:intergenic
GCTTGTCATGGTGCAGAGAG+AGG 0.561389 tig0031493:-22910 None:intergenic
AATAGCCATGAAAATTTCAT+CGG 0.561616 tig0031493:-22789 None:intergenic
TGTCATCTTGGGAGCTCAAG+AGG 0.562299 tig0031493:+30872 Msa1446780:three_prime_UTR
GACAATGTCACCATAGAAGA+TGG 0.562927 tig0031493:+24574 Msa1446780:CDS
TTACATTGACATCTGCTCGC+CGG 0.564196 tig0031493:+23378 Msa1446780:CDS
ACTGCTTCTGAATTATTGGA+TGG 0.564790 tig0031493:+26655 Msa1446780:CDS
ACAAGGAATATACCGTGGCT+CGG 0.564823 tig0031493:+24083 Msa1446780:CDS
GAACTGGAGTTAATTCATGA+TGG 0.565184 tig0031493:+27734 Msa1446780:CDS
AAAGAAACACGCGATTCAGT+CGG 0.571450 tig0031493:-18853 None:intergenic
GGAGACTTTGTCCTTATCAG+TGG 0.573784 tig0031493:+22626 Msa1446780:CDS
GGGGCTCAACCTGCTTGTCA+TGG 0.573811 tig0031493:-22922 None:intergenic
TGAATCAGCTGGTGTAGAAG+AGG 0.574781 tig0031493:+21001 Msa1446780:CDS
TTCATAACATCTGGTACCAG+TGG 0.577449 tig0031493:-24030 None:intergenic
AAGAGTGATAGGTCTAAACT+TGG 0.579985 tig0031493:-19719 None:intergenic
TGCTGACAGTGTCATAACTT+CGG 0.582802 tig0031493:-23981 None:intergenic
AAGTATTCTTCCACCTTCTG+GGG 0.583960 tig0031493:+27757 Msa1446780:CDS
AGTATCTCTACTACAGCAGC+CGG 0.584040 tig0031493:+25153 Msa1446780:CDS
GTCATCTTGGGAGCTCAAGA+GGG 0.584236 tig0031493:+30873 Msa1446780:three_prime_UTR
TCATAGATGGACATATCCAC+TGG 0.588064 tig0031493:+24014 Msa1446780:CDS
CTTGTCATGGTGCAGAGAGA+GGG 0.589004 tig0031493:-22909 None:intergenic
ACAACGGCGACGGCAATCGA+CGG 0.591644 tig0031493:-19108 None:intergenic
GCTATCCATCAGTCTCGACT+TGG 0.593196 tig0031493:+22764 Msa1446780:CDS
CGGGTCAAATGTACACATAG+AGG 0.593427 tig0031493:+24537 Msa1446780:CDS
GCCAACAGAATCGCCTGTAA+CGG 0.595148 tig0031493:-19682 None:intergenic
TTGTCTGTAGTGGCTAAAAG+AGG 0.596027 tig0031493:+30775 Msa1446780:intron
CTCGTCCGTATCATTCAGAT+AGG 0.596542 tig0031493:-29635 None:intergenic
AGCACAGTGGATAAGTCAGA+TGG 0.596852 tig0031493:+26628 Msa1446780:CDS
AAGCAACATGTCGCTTACTC+AGG 0.597045 tig0031493:+22658 Msa1446780:CDS
TTCATGTTGTACTTACCAAG+TGG 0.599094 tig0031493:+29596 Msa1446780:CDS
CGGAACAAACCTCTGAAGCA+GGG 0.599221 tig0031493:-26687 None:intergenic
TAGGCATGCCATTGTATGTG+AGG 0.601520 tig0031493:+24606 Msa1446780:CDS
GAAGAAAGGCGCGGATGAGG+CGG 0.603471 tig0031493:+30601 Msa1446780:CDS
GGTAACAGCTCCCCAGAAGG+TGG 0.603673 tig0031493:-27767 None:intergenic
AAGCGCTGCTAGGGTTTCAG+AGG 0.606605 tig0031493:+19636 Msa1446780:CDS
ACAACGAAGACGACAATCGA+CGG 0.609160 tig0031493:-19071 None:intergenic
CAAAAGAGGAAGAGAAGTGA+CGG 0.610688 tig0031493:-18975 None:intergenic
TTGACATGGCTTGAATCAGC+TGG 0.610800 tig0031493:+20990 Msa1446780:CDS
GTTTGCTCCATTGTTCACAA+AGG 0.615724 tig0031493:+29957 Msa1446780:CDS
GGATTGGATTATCAAAGATG+TGG 0.616116 tig0031493:-31109 None:intergenic
TGATAAATTACACATTGACA+TGG 0.618999 tig0031493:+20976 Msa1446780:CDS
AAGTTATGACACTGTCAGCA+AGG 0.620949 tig0031493:+23984 Msa1446780:CDS
AATGTGTTTGGAATCTGCGA+AGG 0.621847 tig0031493:+29933 Msa1446780:CDS
AAGAGGAAGAGAAGTGACGG+TGG 0.622550 tig0031493:-18972 None:intergenic
GTTTGGCCAAAATGTGAAGG+AGG 0.624679 tig0031493:+27632 Msa1446780:CDS
TTAAAAGACAGCACAACACC+AGG 0.626342 tig0031493:-24661 None:intergenic
GGGTCAAATGTACACATAGA+GGG 0.626953 tig0031493:+24538 Msa1446780:CDS
GGAGGAGTAGAGAGAAGCGA+CGG 0.630322 tig0031493:-18951 None:intergenic
GGCATGCCATTGTATGTGAG+GGG 0.631236 tig0031493:+24608 Msa1446780:CDS
GTAGAACACAACAACGGCGA+CGG 0.632518 tig0031493:-19118 None:intergenic
TTGAAGAAGAGTCTATAGGG+AGG 0.633938 tig0031493:-19204 None:intergenic
TTAGGTAACAGCTCCCCAGA+AGG 0.638298 tig0031493:-27770 None:intergenic
TCCGCGCAGATTATGCTGCA+AGG 0.638328 tig0031493:+23947 Msa1446780:CDS
TATCACTCTTGAACGCCCCA+AGG 0.638983 tig0031493:+19732 Msa1446780:CDS
TCATGGTGCAGAGAGAGGGA+AGG 0.640432 tig0031493:-22905 None:intergenic
GAATATGCTGATAGTACTAG+TGG 0.642214 tig0031493:+25202 Msa1446780:CDS
TTTCATCCATACCCGAGCCA+CGG 0.644715 tig0031493:-24095 None:intergenic
GAGGCCATGAGGAAGAGTGG+AGG 0.645571 tig0031493:+27651 Msa1446780:CDS
GCTACTAAGCTTGAAAGACA+AGG 0.649677 tig0031493:+24066 Msa1446780:CDS
TAGTAATGCTGTAATGACCA+TGG 0.655646 tig0031493:+22715 Msa1446780:CDS
CAGCAACAGATGAAGAGAAG+CGG 0.660084 tig0031493:-18925 None:intergenic
GGACATCTATATATTTGTCG+AGG 0.660131 tig0031493:+30846 Msa1446780:three_prime_UTR
GGAAGAGTGGAGGCATTCAG+TGG 0.663488 tig0031493:+27661 Msa1446780:CDS
CAACAGATGAAGAGAAGCGG+CGG 0.665733 tig0031493:-18922 None:intergenic
AGCTCACCAGCTGAACTATG+GGG 0.666465 tig0031493:-28834 None:intergenic
TATGTTTGGCCAAAATGTGA+AGG 0.666968 tig0031493:+27629 Msa1446780:CDS
AGAGATACTTGTGAATAAGG+AGG 0.676241 tig0031493:-25139 None:intergenic
GGAAGATGAGAAGAAAGGCG+CGG 0.690784 tig0031493:+30592 Msa1446780:CDS
AATCCTAACTGAAAAGAACA+CGG 0.696865 tig0031493:-30954 None:intergenic
TGCAGCCATCACCAGCACAG+TGG 0.703317 tig0031493:+26615 Msa1446780:intron
TATTATATACGAGCGCAACG+TGG 0.703453 tig0031493:+21157 Msa1446780:CDS
GCATGCCATTGTATGTGAGG+GGG 0.713162 tig0031493:+24609 Msa1446780:CDS
AAAATGTGAAGGAGGCCATG+AGG 0.717990 tig0031493:+27640 Msa1446780:CDS
ACTATTTGGAGAAATCTGAG+TGG 0.722937 tig0031493:+21063 Msa1446780:CDS
TCCTTGCAGCATAATCTGCG+CGG 0.727596 tig0031493:-23948 None:intergenic
GAAAGACAAGGAATATACCG+TGG 0.737588 tig0031493:+24078 Msa1446780:CDS
GAACACGAACAAGCTCATCG+TGG 0.778351 tig0031493:-19660 None:intergenic
ATTGCACTACATGTATAACG+AGG 0.789338 tig0031493:+30538 Msa1446780:CDS
TATGTCGTAGAACACAACAA+CGG 0.790425 tig0031493:-19124 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+CGG + tig0031493:19907-19926 Msa1446780:intron 0.0%
!! TATCAAATTATATAATGTAA+AGG - tig0031493:19393-19412 None:intergenic 10.0%
!! TCATAGATATATAAAAAAAA+GGG - tig0031493:19969-19988 None:intergenic 10.0%
!! TTCATAGATATATAAAAAAA+AGG - tig0031493:19970-19989 None:intergenic 10.0%
!!! TTTTCTTTTCAAATTATTAT+CGG - tig0031493:20037-20056 None:intergenic 10.0%
!!! ATTATGTATTTGTTAATTTA+AGG + tig0031493:20125-20144 Msa1446780:intron 10.0%
!! TTAGTAAGAATAAAAAAATT+TGG + tig0031493:22050-22069 Msa1446780:intron 10.0%
!!! AGTAATTTGTTTTTATAATT+TGG + tig0031493:22447-22466 Msa1446780:intron 10.0%
!! AAAAAAAAAAATGATTCAAA+AGG - tig0031493:23587-23606 None:intergenic 10.0%
!! AATGTAATTCAATAATAATA+GGG - tig0031493:25261-25280 None:intergenic 10.0%
!! TAATGTAATTCAATAATAAT+AGG - tig0031493:25262-25281 None:intergenic 10.0%
!!! TGAATCTTTTATAAATATTT+TGG + tig0031493:25491-25510 Msa1446780:intron 10.0%
!! TTTATCATTTAAAAAAAGAA+TGG + tig0031493:26278-26297 Msa1446780:intron 10.0%
!! TTATCATTTAAAAAAAGAAT+GGG + tig0031493:26279-26298 Msa1446780:intron 10.0%
!!! TTTTAAATTTAATAAAGTTG+AGG + tig0031493:26403-26422 Msa1446780:intron 10.0%
!!! ATTTAATTTACATTTAACAT+TGG + tig0031493:26851-26870 Msa1446780:intron 10.0%
!!! ATTGAAGTTTTTTTTTTATT+TGG + tig0031493:27179-27198 Msa1446780:intron 10.0%
!! TTCTTTAATATATTTAGATA+GGG - tig0031493:28541-28560 None:intergenic 10.0%
!! ATAATATAAATTAATCTCAA+AGG - tig0031493:29535-29554 None:intergenic 10.0%
!!! TTTTTTTTTTTTCTCATTTA+AGG - tig0031493:31029-31048 None:intergenic 10.0%
!! TTAAATGAGAAAAAAAAAAA+AGG + tig0031493:31028-31047 Msa1446780:three_prime_UTR 10.0%
!!! CTTATCTTATTTTTTAGTTT+AGG + tig0031493:19539-19558 Msa1446780:intron 15.0%
!! TATATTTATTACCAAGAAAA+TGG + tig0031493:19600-19619 Msa1446780:intron 15.0%
!! ATATTTATTACCAAGAAAAT+GGG + tig0031493:19601-19620 Msa1446780:intron 15.0%
!! AAAAAAATAGAAATTACCTT+GGG - tig0031493:19751-19770 None:intergenic 15.0%
!!! ATTTATGAATTCATTGTTTT+TGG + tig0031493:19865-19884 Msa1446780:intron 15.0%
!! AGATTTAGAAATTAATAAGT+TGG + tig0031493:20389-20408 Msa1446780:intron 15.0%
!!! TTTACTTTTGATATAGAAAT+AGG + tig0031493:20736-20755 Msa1446780:intron 15.0%
!! CTTAAATTAACAAACAAATA+CGG - tig0031493:20833-20852 None:intergenic 15.0%
!!! TTTATTTGTTTCTTGATTTA+AGG + tig0031493:20926-20945 Msa1446780:intron 15.0%
!!! TTTTTGTAATAAACAGATTT+TGG + tig0031493:22276-22295 Msa1446780:intron 15.0%
!! TTATATTTCTTTCAGATAAT+GGG + tig0031493:23901-23920 Msa1446780:intron 15.0%
!! TGTAACATTAAATGATAAAA+TGG + tig0031493:24153-24172 Msa1446780:intron 15.0%
!! AAATACTAAACACAAATTAA+AGG - tig0031493:24845-24864 None:intergenic 15.0%
!!! TTAAAAGCTTTATGAAAATT+CGG - tig0031493:25233-25252 None:intergenic 15.0%
!!! CTTTTATAAATATTTTGGAT+TGG + tig0031493:25496-25515 Msa1446780:intron 15.0%
!! GTTTATAATAACAAAATACA+TGG - tig0031493:26323-26342 None:intergenic 15.0%
!!! ATCAAGTAATGTATTTTTTT+AGG - tig0031493:26466-26485 None:intergenic 15.0%
!! GTAAATTAAATTCTACAATT+TGG - tig0031493:26842-26861 None:intergenic 15.0%
!!! TTTTTTTATTGAAATCGATT+TGG + tig0031493:26906-26925 Msa1446780:intron 15.0%
!! ATGAAAGAAAAAAAAAAACA+GGG - tig0031493:27146-27165 None:intergenic 15.0%
!!! TGATAGAATTTTCATTTTAA+AGG + tig0031493:27545-27564 Msa1446780:intron 15.0%
!!! GATAGAATTTTCATTTTAAA+GGG + tig0031493:27546-27565 Msa1446780:intron 15.0%
!!! AAAATTTTATCTTCAGTAAT+AGG - tig0031493:27689-27708 None:intergenic 15.0%
!!! TATTACTGAAGATAAAATTT+TGG + tig0031493:27688-27707 Msa1446780:CDS 15.0%
!! TTATCATGTTATTATTAGTT+CGG - tig0031493:28230-28249 None:intergenic 15.0%
!! GTTCTTTAATATATTTAGAT+AGG - tig0031493:28542-28561 None:intergenic 15.0%
!! GTTTCTCTTTATATTTAATT+AGG - tig0031493:29084-29103 None:intergenic 15.0%
!! AAACTAAAAAATAATGCAAT+TGG - tig0031493:29740-29759 None:intergenic 15.0%
!!! CATTATTTTTTAGTTTAATC+TGG + tig0031493:29744-29763 Msa1446780:intron 15.0%
!!! ATGAGTTTTATTCTTGATTA+AGG + tig0031493:19433-19452 Msa1446780:intron 20.0%
!!! CTTATTTTTTAGTTTAGGTT+TGG + tig0031493:19544-19563 Msa1446780:intron 20.0%
!! AAAAAATAGAAATTACCTTG+GGG - tig0031493:19750-19769 None:intergenic 20.0%
!! CAAAAAAATAGAAATTACCT+TGG - tig0031493:19752-19771 None:intergenic 20.0%
!!! ATGCGTTTATTCATTATTTT+TGG + tig0031493:19838-19857 Msa1446780:intron 20.0%
!! AAATTATAAGAGAACCTATT+AGG + tig0031493:20364-20383 Msa1446780:intron 20.0%
!! AACATTCATATATAAGAACA+TGG + tig0031493:20543-20562 Msa1446780:intron 20.0%
!!! CGTATTTGTTTGTTAATTTA+AGG + tig0031493:20831-20850 Msa1446780:intron 20.0%
!! ATAGTTGTTACAGTAAAATT+AGG - tig0031493:21098-21117 None:intergenic 20.0%
!!! AGAGAAAATTTTGAAAATCA+AGG + tig0031493:21415-21434 Msa1446780:intron 20.0%
!!! AAATTTTGAAAATCAAGGAA+TGG + tig0031493:21420-21439 Msa1446780:intron 20.0%
!! TAATAAAAACTGTATTCTGT+TGG - tig0031493:21711-21730 None:intergenic 20.0%
!! TTATGATCAATCAAAATGAA+TGG + tig0031493:21728-21747 Msa1446780:intron 20.0%
!! TATTAAAGATGTATCTTATC+TGG + tig0031493:21958-21977 Msa1446780:intron 20.0%
!! AAAAAAATTTGGATACTTTC+TGG + tig0031493:22061-22080 Msa1446780:intron 20.0%
!! AAAAAATTTGGATACTTTCT+GGG + tig0031493:22062-22081 Msa1446780:intron 20.0%
!!! TTTTCTATTTTGAAGATACA+AGG + tig0031493:22605-22624 Msa1446780:intron 20.0%
!!! AATAAATCATCGATTCATTT+GGG - tig0031493:23216-23235 None:intergenic 20.0%
!!! TAATAAATCATCGATTCATT+TGG - tig0031493:23217-23236 None:intergenic 20.0%
!!! ATTATTAATGCTACTTTGTT+TGG + tig0031493:23282-23301 Msa1446780:intron 20.0%
!! CATTATCTGAAAGAAATATA+AGG - tig0031493:23902-23921 None:intergenic 20.0%
!! CTTATATTTCTTTCAGATAA+TGG + tig0031493:23900-23919 Msa1446780:intron 20.0%
!! AACTTCATACATTCAATTAA+TGG - tig0031493:24375-24394 None:intergenic 20.0%
!! AATATATTAACCATTAGTAG+TGG + tig0031493:24877-24896 Msa1446780:intron 20.0%
!!! TGTTTTTTTTTCTCATTAGA+TGG + tig0031493:25015-25034 Msa1446780:intron 20.0%
!!! GTTTTTTTTTCTCATTAGAT+GGG + tig0031493:25016-25035 Msa1446780:intron 20.0%
!! TGAATTACATTATTAGCAAT+TGG + tig0031493:25270-25289 Msa1446780:intron 20.0%
!! CAAACAGTTAGAATAATTAT+TGG + tig0031493:25641-25660 Msa1446780:intron 20.0%
!! TAGAATAATTATTGGAATCA+AGG + tig0031493:25649-25668 Msa1446780:intron 20.0%
!! AGAATAATTATTGGAATCAA+GGG + tig0031493:25650-25669 Msa1446780:intron 20.0%
!! AATTTCAGTTATTAAACAGA+GGG + tig0031493:25675-25694 Msa1446780:intron 20.0%
!! TTTGCAAGAAAAAAATCTTT+AGG - tig0031493:25913-25932 None:intergenic 20.0%
!!! ATTTTTTTCTTGCAAAGAAT+TGG + tig0031493:25917-25936 Msa1446780:intron 20.0%
!! TTTAAAAAAAGAATGGGAAT+TGG + tig0031493:26285-26304 Msa1446780:intron 20.0%
!! TCAAACTTGATAAATGAAAA+TGG - tig0031493:26345-26364 None:intergenic 20.0%
!! CTGGTATTTGATAAAAATTT+AGG + tig0031493:26439-26458 Msa1446780:intron 20.0%
!!! TATTTTCTTTATACTATGTG+TGG + tig0031493:26521-26540 Msa1446780:intron 20.0%
!!! TATGTTTTTTGTATGTAGAT+AGG + tig0031493:26551-26570 Msa1446780:intron 20.0%
!!! ACATAAATTAAGAAGTTTTC+CGG - tig0031493:26710-26729 None:intergenic 20.0%
!!! TACATCTCTAAAATGTTATT+TGG - tig0031493:26800-26819 None:intergenic 20.0%
!! GATGAAAGAAAAAAAAAAAC+AGG - tig0031493:27147-27166 None:intergenic 20.0%
!!! GAAGTTTTTTTTTTATTTGG+TGG + tig0031493:27182-27201 Msa1446780:intron 20.0%
!! TAGTGTATAAACAATATATC+TGG + tig0031493:27386-27405 Msa1446780:intron 20.0%
!! TTTGACATATAAACTTACAT+CGG + tig0031493:27859-27878 Msa1446780:intron 20.0%
!!! TGAAAACAACTTACTTTTAA+AGG - tig0031493:28144-28163 None:intergenic 20.0%
!! TAATAATAACATGATAAAGC+TGG + tig0031493:28233-28252 Msa1446780:intron 20.0%
!! GAAAGTTAATATGTATCTAT+AGG - tig0031493:28340-28359 None:intergenic 20.0%
!!! GTTCATAACTATTATTTTTC+TGG + tig0031493:28614-28633 Msa1446780:intron 20.0%
!!! ACATTGTTTTTATTTGTGTT+AGG + tig0031493:28736-28755 Msa1446780:intron 20.0%
!! TATGCCTGATAAAAAATAAA+CGG - tig0031493:28900-28919 None:intergenic 20.0%
!! TGTTACTAAATATATCTGAT+AGG - tig0031493:28958-28977 None:intergenic 20.0%
!!! ATATGGTTTTACTGAAATTT+TGG + tig0031493:29348-29367 Msa1446780:intron 20.0%
!! TTAATTTATATTATTGCCTG+TGG + tig0031493:29541-29560 Msa1446780:intron 20.0%
!! TAATTTATATTATTGCCTGT+GGG + tig0031493:29542-29561 Msa1446780:intron 20.0%
!! AAAATTTGAAGAAATGTGTT+TGG + tig0031493:29921-29940 Msa1446780:CDS 20.0%
!! TACAATACTTGTAAAATGAT+TGG + tig0031493:30438-30457 Msa1446780:intron 20.0%
!!! ATAATAAAGCCTATTTCTAT+TGG - tig0031493:31054-31073 None:intergenic 20.0%
!! TAGAAGAAAAAGAAAGATTA+AGG + tig0031493:31074-31093 Msa1446780:three_prime_UTR 20.0%
!!! TTTTGTTTTTGACAACAATC+TGG - tig0031493:19029-19048 None:intergenic 25.0%
! TATGCAATAAAGTTGTAGTT+TGG + tig0031493:19493-19512 Msa1446780:intron 25.0%
! TTCATTGTAATCATACGTTT+CGG + tig0031493:20065-20084 Msa1446780:intron 25.0%
!! GGTTCTCTTATAATTTTTCT+CGG - tig0031493:20360-20379 None:intergenic 25.0%
! ATTTCTAAATCTCTCCTAAT+AGG - tig0031493:20381-20400 None:intergenic 25.0%
!! TAATAAGTTGGACTGAAATA+TGG + tig0031493:20401-20420 Msa1446780:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG + tig0031493:20421-20440 Msa1446780:intron 25.0%
!! GTAATGACATAAATTTTGTG+AGG + tig0031493:20586-20605 Msa1446780:intron 25.0%
! AGAAATAGGTTATACATAAG+CGG + tig0031493:20750-20769 Msa1446780:intron 25.0%
! GTCAATGTGTAATTTATCAT+TGG - tig0031493:20975-20994 None:intergenic 25.0%
! TGATAAATTACACATTGACA+TGG + tig0031493:20976-20995 Msa1446780:CDS 25.0%
!! TATTTCTACTATGAATGTGT+TGG + tig0031493:21598-21617 Msa1446780:intron 25.0%
!! AAAATTCTCTAGAAGGAATA+GGG - tig0031493:21861-21880 None:intergenic 25.0%
! TACATATTGTAGGTACATAT+CGG + tig0031493:22085-22104 Msa1446780:intron 25.0%
!! GGAAACAATACTTTCATTTT+TGG + tig0031493:22135-22154 Msa1446780:intron 25.0%
!!! ACTTTCATTTTTGGAGTATT+TGG + tig0031493:22144-22163 Msa1446780:intron 25.0%
!!! CTTTCATTTTTGGAGTATTT+GGG + tig0031493:22145-22164 Msa1446780:intron 25.0%
! AAATTACTATGACACATGTA+AGG - tig0031493:22435-22454 None:intergenic 25.0%
!!! CACTTTTAGAACATAAAGAA+AGG + tig0031493:22681-22700 Msa1446780:CDS 25.0%
! TAATGACCATGGTTATTAAA+CGG + tig0031493:22726-22745 Msa1446780:CDS 25.0%
! AATAGCCATGAAAATTTCAT+CGG - tig0031493:22792-22811 None:intergenic 25.0%
! ACTCGTAAACGAATTATTAT+CGG + tig0031493:23015-23034 Msa1446780:intron 25.0%
!! AAAAAAATGCAGTTTAGTTC+AGG + tig0031493:23083-23102 Msa1446780:intron 25.0%
! AGTCAAAATTGTCTGTAAAT+AGG - tig0031493:23414-23433 None:intergenic 25.0%
!! AGCTTATCCTTTTTAATAGA+TGG + tig0031493:23550-23569 Msa1446780:intron 25.0%
!!! GCTTTTTCCATCTATTAAAA+AGG - tig0031493:23560-23579 None:intergenic 25.0%
! TTAAATGTTCTCAACAAACA+GGG - tig0031493:23673-23692 None:intergenic 25.0%
! TTTAAATGTTCTCAACAAAC+AGG - tig0031493:23674-23693 None:intergenic 25.0%
! AAACATAAATGATGAGCTTT+AGG - tig0031493:23814-23833 None:intergenic 25.0%
! AATATAAGGTAATGTTGATG+AGG - tig0031493:23888-23907 None:intergenic 25.0%
! ATAAAATGGCAAGCTTATAT+TGG + tig0031493:24167-24186 Msa1446780:intron 25.0%
! ATTAATGGAAACAACACAAT+AGG - tig0031493:24360-24379 None:intergenic 25.0%
! AAAATTATGACCACTACTAA+TGG - tig0031493:24890-24909 None:intergenic 25.0%
! TAATATAAAAAGAGATACCG+AGG + tig0031493:25459-25478 Msa1446780:intron 25.0%
! GAATTTCAGTTATTAAACAG+AGG + tig0031493:25674-25693 Msa1446780:intron 25.0%
! GTAACTCTGTATTATTTAAC+TGG - tig0031493:25862-25881 None:intergenic 25.0%
! AGAGTTACCTTCAAATTTAT+GGG + tig0031493:25874-25893 Msa1446780:intron 25.0%
!! ACAATTGCATTTAAGTGTTT+TGG + tig0031493:25968-25987 Msa1446780:intron 25.0%
! TGTAATTGTTTAGCTAATTC+TGG + tig0031493:26012-26031 Msa1446780:intron 25.0%
!! GAAACATTTTCTAACTTTGT+TGG + tig0031493:26073-26092 Msa1446780:intron 25.0%
! TTTCAAAATCCAATTTAGAG+AGG + tig0031493:26129-26148 Msa1446780:intron 25.0%
! TAAATTTACTTGCAACTCAA+TGG - tig0031493:26503-26522 None:intergenic 25.0%
!!! TTTTAGAGATGTAAGTTTTC+TGG + tig0031493:26807-26826 Msa1446780:intron 25.0%
! AAATTCTACAATTTGGTTGA+CGG - tig0031493:26835-26854 None:intergenic 25.0%
! TGTTAAAACTGTGTTCTATT+CGG + tig0031493:26967-26986 Msa1446780:intron 25.0%
!!! GTTTTTTTTTTATTTGGTGG+TGG + tig0031493:27185-27204 Msa1446780:intron 25.0%
! ACAATGCATAATATATGCAA+AGG - tig0031493:27230-27249 None:intergenic 25.0%
! TATATTGCGAATAAGTTTGT+CGG - tig0031493:27335-27354 None:intergenic 25.0%
!!! CTTTCTTTTTTTAATCAGCT+AGG + tig0031493:27590-27609 Msa1446780:intron 25.0%
!!! TTTTTTAATCAGCTAGGTTT+TGG + tig0031493:27596-27615 Msa1446780:intron 25.0%
!! TACTGAAGATAAAATTTTGG+AGG + tig0031493:27691-27710 Msa1446780:CDS 25.0%
!! TTTAATATTCTGTCATTTGC+AGG + tig0031493:27905-27924 Msa1446780:intron 25.0%
!!! AATTGACTTCTAAAGTCAAA+TGG - tig0031493:27977-27996 None:intergenic 25.0%
! TTTAACATCCAAAATACAGA+GGG - tig0031493:28100-28119 None:intergenic 25.0%
!!! GTTCTGTTTCTTTTTTTGAA+GGG - tig0031493:28419-28438 None:intergenic 25.0%
!!! TGTTCTGTTTCTTTTTTTGA+AGG - tig0031493:28420-28439 None:intergenic 25.0%
! ATTAAAAAGACTCTAACAAC+AGG - tig0031493:28872-28891 None:intergenic 25.0%
!!! TTTCCCGTTTATTTTTTATC+AGG + tig0031493:28893-28912 Msa1446780:intron 25.0%
! ATGCCTGATAAAAAATAAAC+GGG - tig0031493:28899-28918 None:intergenic 25.0%
!! TTTTTATCAGGCATAGAATA+TGG + tig0031493:28905-28924 Msa1446780:intron 25.0%
! TAGAAGATACTGAAATTGAA+AGG + tig0031493:29046-29065 Msa1446780:intron 25.0%
! AGAAGATACTGAAATTGAAA+GGG + tig0031493:29047-29066 Msa1446780:intron 25.0%
! TTTCCAACATGTATATATGT+TGG + tig0031493:29456-29475 Msa1446780:intron 25.0%
!!! TAGTTATATTTTGAACTCTC+AGG + tig0031493:29484-29503 Msa1446780:intron 25.0%
!!! AGTTATATTTTGAACTCTCA+GGG + tig0031493:29485-29504 Msa1446780:intron 25.0%
! AAATCACAATAAAAGAAGAG+TGG - tig0031493:29788-29807 None:intergenic 25.0%
! ATCATCCAATGTTCATTATA+AGG + tig0031493:29820-29839 Msa1446780:intron 25.0%
!!! AAGGTATTCTTATCTTTTAC+TGG + tig0031493:29976-29995 Msa1446780:intron 25.0%
!!! ATTCTTATCTTTTACTGGTT+AGG + tig0031493:29981-30000 Msa1446780:intron 25.0%
!! TGTTATAGTTTTTCTTTCTG+AGG - tig0031493:30148-30167 None:intergenic 25.0%
! CAGAAAGAAAAACTATAACA+TGG + tig0031493:30148-30167 Msa1446780:intron 25.0%
! GAGTTAATAATGTTGTGAAA+TGG + tig0031493:30265-30284 Msa1446780:intron 25.0%
!!! ATGGATTTTAACACAATTGA+AGG + tig0031493:30284-30303 Msa1446780:intron 25.0%
! TATATAGACAGCATGAAAAT+GGG - tig0031493:30420-30439 None:intergenic 25.0%
! AAGATACTCACTTGAATTAA+TGG - tig0031493:30653-30672 None:intergenic 25.0%
! TTATTTATTCTTGTCTGTAG+TGG + tig0031493:30765-30784 Msa1446780:intron 25.0%
! AAAAAAAGGCCAATAGAAAT+AGG + tig0031493:31042-31061 Msa1446780:three_prime_UTR 25.0%
!! TTTAAAGTTGAATGGCAAAA+GGG - tig0031493:31133-31152 None:intergenic 25.0%
!! ATTTAAAGTTGAATGGCAAA+AGG - tig0031493:31134-31153 None:intergenic 25.0%
TGATTGAAGAAGAGTCTATA+GGG - tig0031493:19210-19229 None:intergenic 30.0%
ATTCTTGATTAAGGATGTGT+TGG + tig0031493:19442-19461 Msa1446780:intron 30.0%
ATATAAAAAAAAGGGCAACC+CGG - tig0031493:19961-19980 None:intergenic 30.0%
TGCGATGATAAATTTCACAT+TGG + tig0031493:20170-20189 Msa1446780:intron 30.0%
! GGTTAATTTGAACATTTGTG+TGG + tig0031493:20191-20210 Msa1446780:intron 30.0%
ATGACAATATTAGAGAGAGT+TGG + tig0031493:20240-20259 Msa1446780:intron 30.0%
AGTACCAACTATAGTAGAAA+AGG + tig0031493:20263-20282 Msa1446780:intron 30.0%
TAGAAAAGGTGGTTGAAAAT+AGG + tig0031493:20277-20296 Msa1446780:intron 30.0%
ACTAACAACAACAACAAAGA+AGG - tig0031493:20489-20508 None:intergenic 30.0%
! ATAAATTTTGTGAGGCTGTA+TGG + tig0031493:20594-20613 Msa1446780:intron 30.0%
! ACTGTTTTCATAAGCTATCA+TGG - tig0031493:20685-20704 None:intergenic 30.0%
ATAAGCTGTTTATCGAAACT+AGG + tig0031493:20807-20826 Msa1446780:intron 30.0%
!! ATTTAAGGTGCTTTTACCAT+TGG + tig0031493:20941-20960 Msa1446780:intron 30.0%
CTATTGTAAATATGCTACAG+TGG + tig0031493:21235-21254 Msa1446780:intron 30.0%
TTGAAGTCTGTATTGAACAA+TGG + tig0031493:21300-21319 Msa1446780:intron 30.0%
CTGGATACATAGTATGATAT+GGG + tig0031493:21364-21383 Msa1446780:intron 30.0%
AGTATGATATGGGTACAATA+TGG + tig0031493:21374-21393 Msa1446780:intron 30.0%
!! TACAATATGGCACTGATTTA+AGG + tig0031493:21387-21406 Msa1446780:intron 30.0%
AATTGTGATCATCCAACAAT+AGG + tig0031493:21535-21554 Msa1446780:intron 30.0%
!!! AAATCTGATTTTTTACCCAG+CGG - tig0031493:21626-21645 None:intergenic 30.0%
AACTGTATTCTGTTGGAAAA+GGG - tig0031493:21704-21723 None:intergenic 30.0%
AAACTGTATTCTGTTGGAAA+AGG - tig0031493:21705-21724 None:intergenic 30.0%
! CAAAATTCTCTAGAAGGAAT+AGG - tig0031493:21862-21881 None:intergenic 30.0%
!! CTATTCCTTCTAGAGAATTT+TGG + tig0031493:21860-21879 Msa1446780:intron 30.0%
AGATTCCAAAATTCTCTAGA+AGG - tig0031493:21868-21887 None:intergenic 30.0%
!!! TAGAGAATTTTGGAATCTCT+TGG + tig0031493:21870-21889 Msa1446780:intron 30.0%
! TTTTTGTGACACATTCTGTT+AGG - tig0031493:21898-21917 None:intergenic 30.0%
AAAGATGTATCTTATCTGGA+TGG + tig0031493:21962-21981 Msa1446780:intron 30.0%
CATGCATTTAATACCGATAT+GGG - tig0031493:22112-22131 None:intergenic 30.0%
ACATGCATTTAATACCGATA+TGG - tig0031493:22113-22132 None:intergenic 30.0%
ATCGGTATTAAATGCATGTT+AGG + tig0031493:22114-22133 Msa1446780:intron 30.0%
TTATGGCTTTCTTAGAATTG+AGG + tig0031493:22240-22259 Msa1446780:intron 30.0%
CTAATGAAACAAACAACAAG+AGG - tig0031493:22330-22349 None:intergenic 30.0%
TTATGTATGCTCTGTTCTAT+TGG + tig0031493:22379-22398 Msa1446780:intron 30.0%
!! CTGTTCTATTGGTTCTTTAA+AGG + tig0031493:22390-22409 Msa1446780:intron 30.0%
! ATTGGTTCTTTAAAGGAACA+AGG + tig0031493:22397-22416 Msa1446780:intron 30.0%
! GTTTTGTGTAGTAACACTAT+TGG + tig0031493:22578-22597 Msa1446780:intron 30.0%
! TTTTGACCGTTTAATAACCA+TGG - tig0031493:22735-22754 None:intergenic 30.0%
TACAAAAGTTGCTTGGTATT+AGG - tig0031493:22818-22837 None:intergenic 30.0%
AGCAGAAAGATAGGAAAAAA+GGG - tig0031493:22945-22964 None:intergenic 30.0%
AAGCAGAAAGATAGGAAAAA+AGG - tig0031493:22946-22965 None:intergenic 30.0%
!!! CTAAACTGCATTTTTTTTCG+TGG - tig0031493:23080-23099 None:intergenic 30.0%
!! TTTTTAGGAGAAAACATCAC+AGG - tig0031493:23123-23142 None:intergenic 30.0%
!!! CGTCACAGGTATTTTTTTTT+AGG - tig0031493:23138-23157 None:intergenic 30.0%
AATTGTCTGTAAATAGGCTA+AGG - tig0031493:23408-23427 None:intergenic 30.0%
!!! ATTTTGACTACCAACATCTT+CGG + tig0031493:23425-23444 Msa1446780:CDS 30.0%
! AAAGGATAAGCTGATTCAAA+AGG - tig0031493:23542-23561 None:intergenic 30.0%
TCTACTTGTTTATCTCTTAC+AGG + tig0031493:23623-23642 Msa1446780:intron 30.0%
TGAAACACTTCAACAGTTTA+TGG + tig0031493:23736-23755 Msa1446780:intron 30.0%
GCAAGGATATAATTCATAGA+TGG + tig0031493:24001-24020 Msa1446780:CDS 30.0%
! GTACCAGATGTTATGAATTT+TGG + tig0031493:24036-24055 Msa1446780:CDS 30.0%
TTGCCAAAATTCATAACATC+TGG - tig0031493:24042-24061 None:intergenic 30.0%
!!! ATGAAAGTTTTGGTGTTGAT+TGG + tig0031493:24112-24131 Msa1446780:intron 30.0%
!!! TGAAAGTTTTGGTGTTGATT+GGG + tig0031493:24113-24132 Msa1446780:intron 30.0%
! AAGATTTTAAATTCCGTCGT+CGG + tig0031493:24499-24518 Msa1446780:CDS 30.0%
CAAACATATGAGAAACATGA+AGG - tig0031493:24720-24739 None:intergenic 30.0%
CTTCATGTTTCTCATATGTT+TGG + tig0031493:24718-24737 Msa1446780:intron 30.0%
CAAACATCTTACATACACTT+AGG - tig0031493:24969-24988 None:intergenic 30.0%
TCTTCGTAAGATGGAAATAT+AGG + tig0031493:25064-25083 Msa1446780:intron 30.0%
CTTCGTAAGATGGAAATATA+GGG + tig0031493:25065-25084 Msa1446780:intron 30.0%
AGTAGAGATACTTGTGAATA+AGG - tig0031493:25145-25164 None:intergenic 30.0%
TTCCTTAGAACTGAATGAAT+TGG + tig0031493:25354-25373 Msa1446780:intron 30.0%
! TTGAGCTTGATTAGATGTTT+TGG + tig0031493:25404-25423 Msa1446780:intron 30.0%
CAGAGTTACCTTCAAATTTA+TGG + tig0031493:25873-25892 Msa1446780:intron 30.0%
GATAGAACCCATAAATTTGA+AGG - tig0031493:25884-25903 None:intergenic 30.0%
!! TTTTGAAAACCATACAAGAG+AGG - tig0031493:26117-26136 None:intergenic 30.0%
AAATGTTTATGCACTTATCG+AGG - tig0031493:26250-26269 None:intergenic 30.0%
AAAAAAAGAATGGGAATTGG+AGG + tig0031493:26288-26307 Msa1446780:intron 30.0%
TCAAATACCAGTTACAGTTA+AGG - tig0031493:26430-26449 None:intergenic 30.0%
AGAAACTGCTTCTGAATTAT+TGG + tig0031493:26651-26670 Msa1446780:CDS 30.0%
AACAGTTACTTAGTATCTTC+AGG - tig0031493:26945-26964 None:intergenic 30.0%
! TTTTCTTCATTGATGTGAGA+GGG + tig0031493:26996-27015 Msa1446780:intron 30.0%
TTAAACTAACAGATCTACAC+AGG + tig0031493:27046-27065 Msa1446780:intron 30.0%
ATAATATATGCAAAGGTCCA+GGG - tig0031493:27223-27242 None:intergenic 30.0%
!!! TCTGATTTTTCAAGTATCGT+TGG + tig0031493:27363-27382 Msa1446780:intron 30.0%
! CAAAGTATCAGCAAATTACT+AGG - tig0031493:27429-27448 None:intergenic 30.0%
TTCTTAGTGAACAATTCATC+CGG + tig0031493:27452-27471 Msa1446780:intron 30.0%
TCATCTGAATCATTAGGATT+AGG - tig0031493:27791-27810 None:intergenic 30.0%
ATGTGTGTTCGATATATATC+TGG + tig0031493:28071-28090 Msa1446780:intron 30.0%
GTTTAACATCCAAAATACAG+AGG - tig0031493:28101-28120 None:intergenic 30.0%
AGATACAAACAACAGAACTA+TGG + tig0031493:28372-28391 Msa1446780:intron 30.0%
TTCTAGACAAAATTGAACAC+TGG - tig0031493:28564-28583 None:intergenic 30.0%
TAGAATATGGTTGGAAAACT+TGG + tig0031493:28918-28937 Msa1446780:intron 30.0%
ACAAATTATGCAGAATGTTC+AGG + tig0031493:28975-28994 Msa1446780:intron 30.0%
! TTCAGGTTACATGAATTAAC+TGG + tig0031493:28992-29011 Msa1446780:intron 30.0%
TCAGGTTACATGAATTAACT+GGG + tig0031493:28993-29012 Msa1446780:intron 30.0%
GAAGATACTGAAATTGAAAG+GGG + tig0031493:29048-29067 Msa1446780:intron 30.0%
ATCACTTACAGAATGCAAAA+AGG + tig0031493:29205-29224 Msa1446780:intron 30.0%
TTGGTTTATGACAAGTACAT+TGG + tig0031493:29367-29386 Msa1446780:intron 30.0%
ACATGTTGGAAAGTAAGATT+GGG - tig0031493:29448-29467 None:intergenic 30.0%
TACATGTTGGAAAGTAAGAT+TGG - tig0031493:29449-29468 None:intergenic 30.0%
TGACCAACATATATACATGT+TGG - tig0031493:29462-29481 None:intergenic 30.0%
!! GTTATATTTTGAACTCTCAG+GGG + tig0031493:29486-29505 Msa1446780:intron 30.0%
ATCTGAAAAATTAATCCCAC+AGG - tig0031493:29560-29579 None:intergenic 30.0%
!! TGTGGGATTAATTTTTCAGA+TGG + tig0031493:29559-29578 Msa1446780:intron 30.0%
!! GATTAATTTTTCAGATGGCT+TGG + tig0031493:29564-29583 Msa1446780:intron 30.0%
! ACAAGCCTTATAATGAACAT+TGG - tig0031493:29828-29847 None:intergenic 30.0%
!!! ATTTTAGAATCACTTCGATC+TGG - tig0031493:29906-29925 None:intergenic 30.0%
AAGAATACCTTTGTGAACAA+TGG - tig0031493:29967-29986 None:intergenic 30.0%
TCACAACATTATTAACTCAC+TGG - tig0031493:30263-30282 None:intergenic 30.0%
GTATATAGACAGCATGAAAA+TGG - tig0031493:30421-30440 None:intergenic 30.0%
TTCATATTCTCACACTACAT+TGG + tig0031493:30471-30490 Msa1446780:intron 30.0%
!!! AAGAAGATGCTATTTTGAGT+TGG + tig0031493:30570-30589 Msa1446780:CDS 30.0%
!!! AGAAGATGCTATTTTGAGTT+GGG + tig0031493:30571-30590 Msa1446780:CDS 30.0%
AAGAAAGTAATGCATCTCAT+GGG - tig0031493:30734-30753 None:intergenic 30.0%
TAAGAAAGTAATGCATCTCA+TGG - tig0031493:30735-30754 None:intergenic 30.0%
!!! CGAAGAGTAGAAATTTTTTG+AGG + tig0031493:30820-30839 Msa1446780:exon 30.0%
!!! AGTAGAAATTTTTTGAGGCT+AGG + tig0031493:30825-30844 Msa1446780:exon 30.0%
AGAATCACACTTGAATTCAA+AGG - tig0031493:30919-30938 None:intergenic 30.0%
AATCCTAACTGAAAAGAACA+CGG - tig0031493:30957-30976 None:intergenic 30.0%
! ATTTAGAGAAACACCAGTTT+TGG + tig0031493:30979-30998 Msa1446780:three_prime_UTR 30.0%
! TTTAGAGAAACACCAGTTTT+GGG + tig0031493:30980-30999 Msa1446780:three_prime_UTR 30.0%
TAAAATACATGACCCAAAAC+TGG - tig0031493:30995-31014 None:intergenic 30.0%
! ATGGCTCATTTAAAGTTGAA+TGG - tig0031493:31141-31160 None:intergenic 30.0%
TATGTCGTAGAACACAACAA+CGG - tig0031493:19127-19146 None:intergenic 35.0%
AGAAAGAAATTGAGAAAGCC+TGG + tig0031493:19153-19172 Msa1446780:five_prime_UTR 35.0%
GTGATTGAAGAAGAGTCTAT+AGG - tig0031493:19211-19230 None:intergenic 35.0%
AAAAATCATCACTGAGTGAG+AGG - tig0031493:19335-19354 None:intergenic 35.0%
AAGAGTGATAGGTCTAAACT+TGG - tig0031493:19722-19741 None:intergenic 35.0%
CATTGACATTGATATGACAC+TGG + tig0031493:20004-20023 Msa1446780:intron 35.0%
!! ATTTAAGGTGCTATTGCCAT+TGG + tig0031493:20140-20159 Msa1446780:intron 35.0%
ATTTGTGTGGTAAGACTAGA+TGG + tig0031493:20204-20223 Msa1446780:intron 35.0%
TTTGTGTGGTAAGACTAGAT+GGG + tig0031493:20205-20224 Msa1446780:intron 35.0%
ACCAACTATAGTAGAAAAGG+TGG + tig0031493:20266-20285 Msa1446780:intron 35.0%
! ACCACCTTTTCTACTATAGT+TGG - tig0031493:20270-20289 None:intergenic 35.0%
AAAATAGGCATAGGTGGTTT+GGG + tig0031493:20292-20311 Msa1446780:intron 35.0%
!! ATTTAAGGTGCTTTTGCCAT+TGG + tig0031493:20846-20865 Msa1446780:intron 35.0%
! ATAATCGAAGCATTCACCAA+TGG - tig0031493:20865-20884 None:intergenic 35.0%
GAAGCAGGTGATTAACTATT+TGG + tig0031493:21049-21068 Msa1446780:CDS 35.0%
ACTATTTGGAGAAATCTGAG+TGG + tig0031493:21063-21082 Msa1446780:CDS 35.0%
AACAATGGTTGTTGTGTTCT+TGG + tig0031493:21315-21334 Msa1446780:intron 35.0%
GTTGTGTTCTTGGTTAGAAT+TGG + tig0031493:21325-21344 Msa1446780:intron 35.0%
! TGGTTTTCAGTTAAGAAACC+TGG + tig0031493:21345-21364 Msa1446780:intron 35.0%
CCATATCATACTATGTATCC+AGG - tig0031493:21366-21385 None:intergenic 35.0%
CCTGGATACATAGTATGATA+TGG + tig0031493:21363-21382 Msa1446780:intron 35.0%
TATGTCACTAAGCCTATTGT+TGG - tig0031493:21550-21569 None:intergenic 35.0%
AGAATCAAAGAAACACATGC+AGG + tig0031493:21655-21674 Msa1446780:intron 35.0%
GAATCAAAGAAACACATGCA+GGG + tig0031493:21656-21675 Msa1446780:intron 35.0%
AAATGAATGGATCCCAAACA+TGG + tig0031493:21741-21760 Msa1446780:intron 35.0%
AATGAATGGATCCCAAACAT+GGG + tig0031493:21742-21761 Msa1446780:intron 35.0%
TTAGTAGTTAGTAGCAGCAA+GGG - tig0031493:21788-21807 None:intergenic 35.0%
ATTAGTAGTTAGTAGCAGCA+AGG - tig0031493:21789-21808 None:intergenic 35.0%
TAACTGCTGCATAAACTTAG+TGG + tig0031493:21834-21853 Msa1446780:intron 35.0%
ACTTTCTGGGTACATATTGT+AGG + tig0031493:22075-22094 Msa1446780:intron 35.0%
!!! CTTCCAAGCTTTTTAAGATG+AGG + tig0031493:22168-22187 Msa1446780:intron 35.0%
ACACCTCATCTTAAAAAGCT+TGG - tig0031493:22174-22193 None:intergenic 35.0%
ATAACCTTATCTAGACTAGG+AGG - tig0031493:22224-22243 None:intergenic 35.0%
TCCTAGTCTAGATAAGGTTA+TGG + tig0031493:22223-22242 Msa1446780:intron 35.0%
TTACAGTATCTCCACTGATA+AGG - tig0031493:22640-22659 None:intergenic 35.0%
TAGTAATGCTGTAATGACCA+TGG + tig0031493:22715-22734 Msa1446780:CDS 35.0%
!!! TGGTACCGATGAAATTTTCA+TGG + tig0031493:22784-22803 Msa1446780:CDS 35.0%
CTCGTAATACAAAAGTTGCT+TGG - tig0031493:22825-22844 None:intergenic 35.0%
! CAAGCAACTTTTGTATTACG+AGG + tig0031493:22823-22842 Msa1446780:CDS 35.0%
GATAAAGCAGACTTCTCAAA+AGG + tig0031493:22845-22864 Msa1446780:CDS 35.0%
GCAGAAAGATAGGAAAAAAG+GGG - tig0031493:22944-22963 None:intergenic 35.0%
TGAAAGCAAAGCAGAAAGAT+AGG - tig0031493:22954-22973 None:intergenic 35.0%
TATCTTTCTGCTTTGCTTTC+AGG + tig0031493:22953-22972 Msa1446780:intron 35.0%
ACTTCACGCTAAAGAGTAAT+TGG + tig0031493:22979-22998 Msa1446780:intron 35.0%
!! GCTAAAGAGTAATTGGTTTG+CGG + tig0031493:22986-23005 Msa1446780:intron 35.0%
GAAATGACAATAAACGTCAC+AGG - tig0031493:23152-23171 None:intergenic 35.0%
! TGTCATTTCAACCTCATGAT+TGG + tig0031493:23163-23182 Msa1446780:intron 35.0%
GTCATTTCAACCTCATGATT+GGG + tig0031493:23164-23183 Msa1446780:intron 35.0%
AGAAAGTTTCATAGCTTCTC+AGG - tig0031493:23320-23339 None:intergenic 35.0%
AGAAGCTATGAAACTTTCTG+AGG + tig0031493:23321-23340 Msa1446780:intron 35.0%
! GTGAATGATTTCTTTTCTGC+AGG + tig0031493:23351-23370 Msa1446780:intron 35.0%
ATTCATGACAGTTCAACATG+TGG - tig0031493:23496-23515 None:intergenic 35.0%
AACAGTTTATGGACTTGCAT+TGG + tig0031493:23747-23766 Msa1446780:intron 35.0%
CAAACAGGCAAACATATAAC+TGG - tig0031493:24202-24221 None:intergenic 35.0%
ACAGCATGAATTAAGCAAAC+AGG - tig0031493:24217-24236 None:intergenic 35.0%
TGCTTGCGAAATATCTGATA+GGG - tig0031493:24416-24435 None:intergenic 35.0%
CAGATCCTATAACAGAGAAT+GGG - tig0031493:24456-24475 None:intergenic 35.0%
ACATAGAGGGATGCTATATA+TGG + tig0031493:24551-24570 Msa1446780:CDS 35.0%
CATAGAGGGATGCTATATAT+GGG + tig0031493:24552-24571 Msa1446780:CDS 35.0%
! AACATGAAGGATGGAAGTAT+GGG - tig0031493:24707-24726 None:intergenic 35.0%
AAACATGAAGGATGGAAGTA+TGG - tig0031493:24708-24727 None:intergenic 35.0%
CATATGAGAAACATGAAGGA+TGG - tig0031493:24716-24735 None:intergenic 35.0%
TCCAGTTATTCTTCGTAAGA+TGG + tig0031493:25055-25074 Msa1446780:intron 35.0%
TCCATCTTACGAAGAATAAC+TGG - tig0031493:25059-25078 None:intergenic 35.0%
TTGTTGTCTTTCATGTTTCC+AGG + tig0031493:25090-25109 Msa1446780:intron 35.0%
AGAGATACTTGTGAATAAGG+AGG - tig0031493:25142-25161 None:intergenic 35.0%
GAATATGCTGATAGTACTAG+TGG + tig0031493:25202-25221 Msa1446780:CDS 35.0%
CTAGCATATGAAATATTGCC+TGG + tig0031493:25309-25328 Msa1446780:intron 35.0%
CACCAATTCATTCAGTTCTA+AGG - tig0031493:25359-25378 None:intergenic 35.0%
CTTAGAACTGAATGAATTGG+TGG + tig0031493:25357-25376 Msa1446780:intron 35.0%
!! AAGTTTGCTGAGAGTTGTTT+AGG + tig0031493:25723-25742 Msa1446780:intron 35.0%
GATGAAAACAGAAAACTGAG+AGG - tig0031493:25811-25830 None:intergenic 35.0%
TCTATACAGCCTCTCTAAAT+TGG - tig0031493:26141-26160 None:intergenic 35.0%
TGTGAGACTGTTCATTCAAA+AGG - tig0031493:26171-26190 None:intergenic 35.0%
CACAGAAAAACTAGAGAAAG+AGG - tig0031493:26211-26230 None:intergenic 35.0%
!!! CTCTTTCTCTAGTTTTTCTG+TGG + tig0031493:26209-26228 Msa1446780:intron 35.0%
ATTTACTTGCAACTCAATGG+AGG - tig0031493:26500-26519 None:intergenic 35.0%
CTTTATACTATGTGTGGATG+TGG + tig0031493:26527-26546 Msa1446780:intron 35.0%
GATGGCTGCATAAATGAAAA+TGG - tig0031493:26605-26624 None:intergenic 35.0%
ACTGCTTCTGAATTATTGGA+TGG + tig0031493:26655-26674 Msa1446780:CDS 35.0%
ACAGCAGTAAAGCTAAACAA+TGG - tig0031493:26739-26758 None:intergenic 35.0%
! GTTTTCTTCATTGATGTGAG+AGG + tig0031493:26995-27014 Msa1446780:intron 35.0%
GTTGAATTACAACAAGCACA+GGG - tig0031493:27099-27118 None:intergenic 35.0%
AGTTGAATTACAACAAGCAC+AGG - tig0031493:27100-27119 None:intergenic 35.0%
CATAATATATGCAAAGGTCC+AGG - tig0031493:27224-27243 None:intergenic 35.0%
GTATCAGCAAATTACTAGGT+TGG - tig0031493:27425-27444 None:intergenic 35.0%
ATCCACTACAATCATTTGCA+TGG - tig0031493:27479-27498 None:intergenic 35.0%
!! TTTAATCAGCTAGGTTTTGG+TGG + tig0031493:27599-27618 Msa1446780:intron 35.0%
!! TTAATCAGCTAGGTTTTGGT+GGG + tig0031493:27600-27619 Msa1446780:intron 35.0%
TATGTTTGGCCAAAATGTGA+AGG + tig0031493:27629-27648 Msa1446780:CDS 35.0%
GAACTGGAGTTAATTCATGA+TGG + tig0031493:27734-27753 Msa1446780:CDS 35.0%
TCATCGTCATCTGAATCATT+AGG - tig0031493:27797-27816 None:intergenic 35.0%
AAGAGATGACTTTGACAAAG+AGG + tig0031493:27829-27848 Msa1446780:CDS 35.0%
TCATGCATGCATCATATACT+TGG + tig0031493:28170-28189 Msa1446780:intron 35.0%
! TATTCTACTAACCGACTCAA+CGG + tig0031493:28303-28322 Msa1446780:intron 35.0%
!!! CTGTTTCTTTTTTTGAAGGG+AGG - tig0031493:28416-28435 None:intergenic 35.0%
TGTTACAGTTATTGTGCACT+AGG - tig0031493:28447-28466 None:intergenic 35.0%
TATTTAGATAGGGTCAGTTG+AGG - tig0031493:28531-28550 None:intergenic 35.0%
ACTTTGAATCTGCATTCACT+AGG + tig0031493:28698-28717 Msa1446780:intron 35.0%
AGACTCTAACAACAGGAATA+TGG - tig0031493:28865-28884 None:intergenic 35.0%
TATCAGGCATAGAATATGGT+TGG + tig0031493:28909-28928 Msa1446780:intron 35.0%
GTGAAGTTATACTCTCATAG+TGG - tig0031493:29106-29125 None:intergenic 35.0%
TAGCTAAAAACTTATGCCAG+TGG - tig0031493:29184-29203 None:intergenic 35.0%
CGAATGAATATGATACAGGT+AGG - tig0031493:29240-29259 None:intergenic 35.0%
ACCTGTATCATATTCATTCG+AGG + tig0031493:29240-29259 Msa1446780:intron 35.0%
TCCTCGAATGAATATGATAC+AGG - tig0031493:29244-29263 None:intergenic 35.0%
!! TACATTGGTGTTAGTATCCA+TGG + tig0031493:29382-29401 Msa1446780:intron 35.0%
TTCATGTTGTACTTACCAAG+TGG + tig0031493:29596-29615 Msa1446780:CDS 35.0%
TGTACTTACCAAGTGGAAAA+AGG + tig0031493:29603-29622 Msa1446780:CDS 35.0%
TGCATCCTATCTGAATGATA+CGG + tig0031493:29630-29649 Msa1446780:CDS 35.0%
GAACATGAGTAACTTCAACA+AGG - tig0031493:29685-29704 None:intergenic 35.0%
! TCGATCTGGAGCAAAAAAAT+TGG - tig0031493:29892-29911 None:intergenic 35.0%
! TTGAGTTGTCCTTATTCAGT+TGG + tig0031493:30007-30026 Msa1446780:intron 35.0%
TTAGACAGTGTTATATCCTC+TGG + tig0031493:30179-30198 Msa1446780:intron 35.0%
TAGACAGTGTTATATCCTCT+GGG + tig0031493:30180-30199 Msa1446780:intron 35.0%
GTTGGAACTTCAATTGTGTT+AGG - tig0031493:30331-30350 None:intergenic 35.0%
GTTAAGGAGTCAAAACACAA+AGG - tig0031493:30507-30526 None:intergenic 35.0%
GCAATATCTGAAAGCAGTTA+AGG - tig0031493:30523-30542 None:intergenic 35.0%
ATTGCACTACATGTATAACG+AGG + tig0031493:30538-30557 Msa1446780:CDS 35.0%
CTTGAATTAATGGTTGAGCT+TGG - tig0031493:30643-30662 None:intergenic 35.0%
GGACATCTATATATTTGTCG+AGG + tig0031493:30846-30865 Msa1446780:three_prime_UTR 35.0%
! AGTGTGATTCTCTTTTCACA+CGG + tig0031493:30928-30947 Msa1446780:three_prime_UTR 35.0%
! TATCCGTGTTCTTTTCAGTT+AGG + tig0031493:30951-30970 Msa1446780:three_prime_UTR 35.0%
GGATTGGATTATCAAAGATG+TGG - tig0031493:31112-31131 None:intergenic 35.0%
AAAGAAACACGCGATTCAGT+CGG - tig0031493:18856-18875 None:intergenic 40.0%
CAAAAGAGGAAGAGAAGTGA+CGG - tig0031493:18978-18997 None:intergenic 40.0%
!! GCTTTTGTTGTGTAGAGAAG+CGG - tig0031493:19007-19026 None:intergenic 40.0%
TTGAAGAAGAGTCTATAGGG+AGG - tig0031493:19207-19226 None:intergenic 40.0%
! GTTTCGGTGATCAAAAGTGT+AGG + tig0031493:20081-20100 Msa1446780:intron 40.0%
ATCATCGCAACAATCACCAA+TGG - tig0031493:20159-20178 None:intergenic 40.0%
AGGTGGTTGAAAATAGGCAT+AGG + tig0031493:20283-20302 Msa1446780:intron 40.0%
TGGTTGAAAATAGGCATAGG+TGG + tig0031493:20286-20305 Msa1446780:intron 40.0%
GAAAATAGGCATAGGTGGTT+TGG + tig0031493:20291-20310 Msa1446780:intron 40.0%
AGGCTGTATGGAAGAACTTA+TGG + tig0031493:20606-20625 Msa1446780:intron 40.0%
ATCATTGGAACATTCGCCAA+TGG - tig0031493:20960-20979 None:intergenic 40.0%
TCTCAAAATTGTGTCAGTGC+TGG + tig0031493:21122-21141 Msa1446780:CDS 40.0%
TATTATATACGAGCGCAACG+TGG + tig0031493:21157-21176 Msa1446780:CDS 40.0%
! ATGCAGGGATTTTTCTGCAA+GGG + tig0031493:21671-21690 Msa1446780:intron 40.0%
ATGAATGGATCCCAAACATG+GGG + tig0031493:21743-21762 Msa1446780:intron 40.0%
ATACTGTTACCCCCATGTTT+GGG - tig0031493:21756-21775 None:intergenic 40.0%
AATACTGTTACCCCCATGTT+TGG - tig0031493:21757-21776 None:intergenic 40.0%
GTTAGTAGTTAGAGAGGGAA+AGG - tig0031493:21818-21837 None:intergenic 40.0%
CAGCAGTTAGTAGTTAGAGA+GGG - tig0031493:21823-21842 None:intergenic 40.0%
! ATGTACCTGAGCAGTATTGA+GGG + tig0031493:22019-22038 Msa1446780:intron 40.0%
GCCATAACCTTATCTAGACT+AGG - tig0031493:22227-22246 None:intergenic 40.0%
GTAAATAGGCTAAGGACTTC+CGG - tig0031493:23400-23419 None:intergenic 40.0%
TGCTGACAGTGTCATAACTT+CGG - tig0031493:23984-24003 None:intergenic 40.0%
AAGTTATGACACTGTCAGCA+AGG + tig0031493:23984-24003 Msa1446780:CDS 40.0%
TCATAGATGGACATATCCAC+TGG + tig0031493:24014-24033 Msa1446780:CDS 40.0%
TTCATAACATCTGGTACCAG+TGG - tig0031493:24033-24052 None:intergenic 40.0%
GCTACTAAGCTTGAAAGACA+AGG + tig0031493:24066-24085 Msa1446780:CDS 40.0%
GAAAGACAAGGAATATACCG+TGG + tig0031493:24078-24097 Msa1446780:CDS 40.0%
! TCGGGTATGGATGAAAGTTT+TGG + tig0031493:24102-24121 Msa1446780:intron 40.0%
TATCACCCTTGTAGATTGCT+GGG + tig0031493:24319-24338 Msa1446780:intron 40.0%
TTTGACCCAGCAATCTACAA+GGG - tig0031493:24327-24346 None:intergenic 40.0%
! TTTTGACCCAGCAATCTACA+AGG - tig0031493:24328-24347 None:intergenic 40.0%
GCTTGCGAAATATCTGATAG+GGG - tig0031493:24415-24434 None:intergenic 40.0%
GTGCTTGCGAAATATCTGAT+AGG - tig0031493:24417-24436 None:intergenic 40.0%
CCAGATCCTATAACAGAGAA+TGG - tig0031493:24457-24476 None:intergenic 40.0%
CCATTCTCTGTTATAGGATC+TGG + tig0031493:24454-24473 Msa1446780:CDS 40.0%
ATAGGATCTGGCACCAAAAT+TGG + tig0031493:24466-24485 Msa1446780:CDS 40.0%
! CTTCGTGTTCTTGCCAATTT+TGG - tig0031493:24482-24501 None:intergenic 40.0%
GGGTCAAATGTACACATAGA+GGG + tig0031493:24538-24557 Msa1446780:CDS 40.0%
GACAATGTCACCATAGAAGA+TGG + tig0031493:24574-24593 Msa1446780:CDS 40.0%
AAGTTCACAGCCATCTTCTA+TGG - tig0031493:24587-24606 None:intergenic 40.0%
TAGAAGATGGCTGTGAACTT+AGG + tig0031493:24587-24606 Msa1446780:CDS 40.0%
TATGAAATCAGGATCTGCTC+TGG + tig0031493:24636-24655 Msa1446780:CDS 40.0%
TTAAAAGACAGCACAACACC+AGG - tig0031493:24664-24683 None:intergenic 40.0%
!!! TGGTGTTGTGCTGTCTTTTA+AGG + tig0031493:24663-24682 Msa1446780:CDS 40.0%
CACACTTCACCACAATATTC+AGG + tig0031493:24758-24777 Msa1446780:intron 40.0%
ACTTCACCACAATATTCAGG+TGG + tig0031493:24761-24780 Msa1446780:intron 40.0%
TAGTGACCACCTGAATATTG+TGG - tig0031493:24770-24789 None:intergenic 40.0%
TCATGTTTCCAGGTTGTAGT+TGG + tig0031493:25100-25119 Msa1446780:intron 40.0%
CATGTTTCCAGGTTGTAGTT+GGG + tig0031493:25101-25120 Msa1446780:intron 40.0%
! AATTTTCCTCACTATCAGCC+AGG - tig0031493:25330-25349 None:intergenic 40.0%
AAGATTCAGTGTATGCACCT+CGG - tig0031493:25479-25498 None:intergenic 40.0%
AACACATGTACAGGAACTCA+GGG - tig0031493:25551-25570 None:intergenic 40.0%
AAGCTGTACTTGTGTGGTTT+GGG - tig0031493:25589-25608 None:intergenic 40.0%
! TTCTAGAAGCTGTACTTGTG+TGG - tig0031493:25595-25614 None:intergenic 40.0%
TAAACAGAGGGAATCCTAGA+CGG + tig0031493:25687-25706 Msa1446780:intron 40.0%
AGAGAAGTTCTCTCTGATCT+AGG + tig0031493:25746-25765 Msa1446780:intron 40.0%
!! ACTTTGTTGGCTTGAGTACA+TGG + tig0031493:26086-26105 Msa1446780:intron 40.0%
!! CTTTGTTGGCTTGAGTACAT+GGG + tig0031493:26087-26106 Msa1446780:intron 40.0%
TTGAGGTCCTTAACTGTAAC+TGG + tig0031493:26420-26439 Msa1446780:intron 40.0%
!! ACATTTTAACCCTGCTTCAG+AGG + tig0031493:26678-26697 Msa1446780:CDS 40.0%
GTTACTTAGTATCTTCAGGC+TGG - tig0031493:26941-26960 None:intergenic 40.0%
CTAACAGATCTACACAGGAT+AGG + tig0031493:27051-27070 Msa1446780:intron 40.0%
CAGGGTGAAATTAAAGCTAG+AGG - tig0031493:27081-27100 None:intergenic 40.0%
CTACAATCATTTGCATGGTC+CGG - tig0031493:27474-27493 None:intergenic 40.0%
GACCATGCAAATGATTGTAG+TGG + tig0031493:27474-27493 Msa1446780:intron 40.0%
!! TAATCAGCTAGGTTTTGGTG+GGG + tig0031493:27601-27620 Msa1446780:intron 40.0%
TTTGGAGGCAATGAAAGCTA+TGG + tig0031493:27706-27725 Msa1446780:CDS 40.0%
GAAAGCTATGGAAGATGAAC+TGG + tig0031493:27718-27737 Msa1446780:CDS 40.0%
! GAAGTATTCTTCCACCTTCT+GGG + tig0031493:27756-27775 Msa1446780:CDS 40.0%
AAGTATTCTTCCACCTTCTG+GGG + tig0031493:27757-27776 Msa1446780:CDS 40.0%
!! CTTACATCGGTTGCATTTTG+TGG + tig0031493:27872-27891 Msa1446780:intron 40.0%
! AGGTTGAAGCAACTTTTCTG+AGG + tig0031493:27925-27944 Msa1446780:intron 40.0%
! GGTTGAAGCAACTTTTCTGA+GGG + tig0031493:27926-27945 Msa1446780:intron 40.0%
AGTTCGGACATGAAAACTGA+AGG - tig0031493:28214-28233 None:intergenic 40.0%
ATATCCTAACTCCGTTGAGT+CGG - tig0031493:28317-28336 None:intergenic 40.0%
GTGCACAATAACTGTAACAC+AGG + tig0031493:28448-28467 Msa1446780:intron 40.0%
TAGAAGCTATGCCATCTTCA+TGG + tig0031493:28579-28598 Msa1446780:intron 40.0%
TATGCCATCTTCATGGATGA+TGG + tig0031493:28586-28605 Msa1446780:intron 40.0%
GAACTGCAATTCTTTGACTC+CGG + tig0031493:28636-28655 Msa1446780:intron 40.0%
AACACATATGACGAGAACAC+CGG - tig0031493:28658-28677 None:intergenic 40.0%
GTTGGAAAACTTGGCATCTT+GGG + tig0031493:28927-28946 Msa1446780:intron 40.0%
ACTGAAATTGAAAGGGGTAG+AGG + tig0031493:29054-29073 Msa1446780:intron 40.0%
CTGAAATTGAAAGGGGTAGA+GGG + tig0031493:29055-29074 Msa1446780:intron 40.0%
GTAATAGCGCTTGCTCTATA+TGG + tig0031493:29331-29350 Msa1446780:intron 40.0%
! TGCAAGAACCTTTTTCCACT+TGG - tig0031493:29614-29633 None:intergenic 40.0%
! AATGTGTTTGGAATCTGCGA+AGG + tig0031493:29933-29952 Msa1446780:CDS 40.0%
GTTTGCTCCATTGTTCACAA+AGG + tig0031493:29957-29976 Msa1446780:CDS 40.0%
GACATGCTACCAACTGAATA+AGG - tig0031493:30019-30038 None:intergenic 40.0%
! AAGTATTTTCCTATGCCCAG+AGG - tig0031493:30198-30217 None:intergenic 40.0%
TTTCAGTCAGCAAAGCAAGT+AGG - tig0031493:30369-30388 None:intergenic 40.0%
AGTTGGGAAGATGAGAAGAA+AGG + tig0031493:30587-30606 Msa1446780:CDS 40.0%
TTGTCTGTAGTGGCTAAAAG+AGG + tig0031493:30775-30794 Msa1446780:intron 40.0%
TTCGTCTTCATCGTCTTCTT+CGG - tig0031493:30804-30823 None:intergenic 40.0%
AGTTGAATGGCAAAAGGGAT+TGG - tig0031493:31128-31147 None:intergenic 40.0%
CAGCAACAGATGAAGAGAAG+CGG - tig0031493:18928-18947 None:intergenic 45.0%
GGTGACAGAAAGTCTAGATC+TGG - tig0031493:19053-19072 None:intergenic 45.0%
ACAACGAAGACGACAATCGA+CGG - tig0031493:19074-19093 None:intergenic 45.0%
CAAAAACGCTTAACGCTTCC+AGG - tig0031493:19174-19193 None:intergenic 45.0%
!!! CTGGAAGCGTTAAGCGTTTT+TGG + tig0031493:19172-19191 Msa1446780:five_prime_UTR 45.0%
!! AGAGTCTATAGGGAGGTGTT+TGG - tig0031493:19200-19219 None:intergenic 45.0%
CAAGAGAGAGAGAAAGAGGT+TGG - tig0031493:19233-19252 None:intergenic 45.0%
AGAGAGAGAGAGGATCGAAT+CGG - tig0031493:19268-19287 None:intergenic 45.0%
! TACGAAATGGAAGCGCGATT+GGG - tig0031493:19310-19329 None:intergenic 45.0%
! TTACGAAATGGAAGCGCGAT+TGG - tig0031493:19311-19330 None:intergenic 45.0%
TGAGTGAGAGGCTTACGAAA+TGG - tig0031493:19323-19342 None:intergenic 45.0%
TATATCGGACCCTGCATATG+CGG + tig0031493:19922-19941 Msa1446780:intron 45.0%
GTGGTAAGACTAGATGGGAT+AGG + tig0031493:20210-20229 Msa1446780:intron 45.0%
AGCTAGGAGAGTAGATCAGA+TGG + tig0031493:20328-20347 Msa1446780:intron 45.0%
TAGGAGAGTAGATCAGATGG+AGG + tig0031493:20331-20350 Msa1446780:intron 45.0%
! AGAAGGCTTTTCCGACTAAG+CGG - tig0031493:20472-20491 None:intergenic 45.0%
TTGACATGGCTTGAATCAGC+TGG + tig0031493:20990-21009 Msa1446780:CDS 45.0%
TGAATCAGCTGGTGTAGAAG+AGG + tig0031493:21001-21020 Msa1446780:CDS 45.0%
! CATGCAGGGATTTTTCTGCA+AGG + tig0031493:21670-21689 Msa1446780:intron 45.0%
TGAATGGATCCCAAACATGG+GGG + tig0031493:21744-21763 Msa1446780:intron 45.0%
GCAGCAGTTAGTAGTTAGAG+AGG - tig0031493:21824-21843 None:intergenic 45.0%
GATGTACCTGAGCAGTATTG+AGG + tig0031493:22018-22037 Msa1446780:intron 45.0%
! TGTACCTGAGCAGTATTGAG+GGG + tig0031493:22020-22039 Msa1446780:intron 45.0%
TATTCCCCTCAATACTGCTC+AGG - tig0031493:22027-22046 None:intergenic 45.0%
GGTACATATCGGACCCATAT+CGG + tig0031493:22096-22115 Msa1446780:intron 45.0%
TCTAGACTAGGAGGTAGCTA+GGG - tig0031493:22215-22234 None:intergenic 45.0%
ATCTAGACTAGGAGGTAGCT+AGG - tig0031493:22216-22235 None:intergenic 45.0%
GCTACCTCCTAGTCTAGATA+AGG + tig0031493:22217-22236 Msa1446780:intron 45.0%
GGAGACTTTGTCCTTATCAG+TGG + tig0031493:22626-22645 Msa1446780:CDS 45.0%
! AAGCAACATGTCGCTTACTC+AGG + tig0031493:22658-22677 Msa1446780:CDS 45.0%
TTACATTGACATCTGCTCGC+CGG + tig0031493:23378-23397 Msa1446780:CDS 45.0%
CAAAATGACGCCGAAGATGT+TGG - tig0031493:23438-23457 None:intergenic 45.0%
!! TCTTCGGCGTCATTTTGTCA+AGG + tig0031493:23441-23460 Msa1446780:CDS 45.0%
!! CTTCGGCGTCATTTTGTCAA+GGG + tig0031493:23442-23461 Msa1446780:CDS 45.0%
ACAAGGAATATACCGTGGCT+CGG + tig0031493:24083-24102 Msa1446780:CDS 45.0%
!! TTGGTGTTGATTGGGTGTGT+TGG + tig0031493:24121-24140 Msa1446780:intron 45.0%
GTATCACCCTTGTAGATTGC+TGG + tig0031493:24318-24337 Msa1446780:intron 45.0%
CAAGCACAATCAGCTGTTGT+TGG + tig0031493:24430-24449 Msa1446780:CDS 45.0%
GTTGGCCCATTCTCTGTTAT+AGG + tig0031493:24448-24467 Msa1446780:CDS 45.0%
TTAAATTCCGTCGTCGGAGT+AGG + tig0031493:24505-24524 Msa1446780:CDS 45.0%
GTCGGAGTAGGATGCAAAAT+CGG + tig0031493:24517-24536 Msa1446780:CDS 45.0%
TCGGAGTAGGATGCAAAATC+GGG + tig0031493:24518-24537 Msa1446780:CDS 45.0%
CGGGTCAAATGTACACATAG+AGG + tig0031493:24537-24556 Msa1446780:CDS 45.0%
TAGGCATGCCATTGTATGTG+AGG + tig0031493:24606-24625 Msa1446780:CDS 45.0%
AGGCATGCCATTGTATGTGA+GGG + tig0031493:24607-24626 Msa1446780:CDS 45.0%
AATCACCCCCTCACATACAA+TGG - tig0031493:24617-24636 None:intergenic 45.0%
GAGGGGGTGATTATGAAATC+AGG + tig0031493:24625-24644 Msa1446780:CDS 45.0%
AGTATCTCTACTACAGCAGC+CGG + tig0031493:25153-25172 Msa1446780:CDS 45.0%
! ATATTGCCTGGCTGATAGTG+AGG + tig0031493:25321-25340 Msa1446780:intron 45.0%
CAACACATGTACAGGAACTC+AGG - tig0031493:25552-25571 None:intergenic 45.0%
CTGAGTTCCTGTACATGTGT+TGG + tig0031493:25550-25569 Msa1446780:intron 45.0%
AATTGGGCCAACACATGTAC+AGG - tig0031493:25560-25579 None:intergenic 45.0%
! ACATGTGTTGGCCCAATTAC+TGG + tig0031493:25562-25581 Msa1446780:intron 45.0%
! CATGTGTTGGCCCAATTACT+GGG + tig0031493:25563-25582 Msa1446780:intron 45.0%
GAAGCTGTACTTGTGTGGTT+TGG - tig0031493:25590-25609 None:intergenic 45.0%
TAGAAGCCTGTAGAAGCTGT+GGG + tig0031493:25610-25629 Msa1446780:intron 45.0%
CTGATCTAGGAGCTTAACTC+TGG + tig0031493:25759-25778 Msa1446780:intron 45.0%
TCTAGGAGCTTAACTCTGGT+AGG + tig0031493:25763-25782 Msa1446780:intron 45.0%
ATGGGTCAACCTCTCTTGTA+TGG + tig0031493:26105-26124 Msa1446780:intron 45.0%
ATCTGACTTATCCACTGTGC+TGG - tig0031493:26629-26648 None:intergenic 45.0%
AGCACAGTGGATAAGTCAGA+TGG + tig0031493:26628-26647 Msa1446780:CDS 45.0%
TCATTGATGTGAGAGGGAGA+TGG + tig0031493:27002-27021 Msa1446780:intron 45.0%
CATTGATGTGAGAGGGAGAT+GGG + tig0031493:27003-27022 Msa1446780:intron 45.0%
!!! TTTTTATTTGGTGGTGGCCG+TGG + tig0031493:27191-27210 Msa1446780:intron 45.0%
ATGTCCTTGTGAGCTTAGCT+CGG - tig0031493:27262-27281 None:intergenic 45.0%
GTTTGGCCAAAATGTGAAGG+AGG + tig0031493:27632-27651 Msa1446780:CDS 45.0%
! TCATGGCCTCCTTCACATTT+TGG - tig0031493:27641-27660 None:intergenic 45.0%
AAAATGTGAAGGAGGCCATG+AGG + tig0031493:27640-27659 Msa1446780:CDS 45.0%
!! GGAAGTATTCTTCCACCTTC+TGG + tig0031493:27755-27774 Msa1446780:CDS 45.0%
! TCTGGCATCCCTCTGTATTT+TGG + tig0031493:28089-28108 Msa1446780:intron 45.0%
TAGATAGGGTCAGTTGAGGT+TGG - tig0031493:28527-28546 None:intergenic 45.0%
CACTCCATCATCCATGAAGA+TGG - tig0031493:28593-28612 None:intergenic 45.0%
! AAGATAGCTGCTGATTGTGC+TGG + tig0031493:28771-28790 Msa1446780:CDS 45.0%
GGTTGGAAAACTTGGCATCT+TGG + tig0031493:28926-28945 Msa1446780:intron 45.0%
TTAACTGGGAGTCTCTAGTG+AGG + tig0031493:29007-29026 Msa1446780:intron 45.0%
TAGAGCAAGCGCTATTACAG+TGG - tig0031493:29329-29348 None:intergenic 45.0%
CTCGTCCGTATCATTCAGAT+AGG - tig0031493:29638-29657 None:intergenic 45.0%
!! CAGTTGGTAGCATGTCAGAA+AGG + tig0031493:30023-30042 Msa1446780:intron 45.0%
GTGTTATATCCTCTGGGCAT+AGG + tig0031493:30186-30205 Msa1446780:intron 45.0%
AGGCGAGCGTGAAAATTTGT+TGG - tig0031493:30311-30330 None:intergenic 45.0%
AGGCGAGCGTGAAAATTTGT+TGG - tig0031493:30311-30330 None:intergenic 45.0%
TCGTCTTCATCGTCTTCTTC+GGG - tig0031493:30803-30822 None:intergenic 45.0%
!!! TGATTTTTTTTTTTTAATTT+TGG + tig0031493:19347-19366 Msa1446780:intron 5.0%
!!! TAACTTTTAAAATTTTTAAT+TGG + tig0031493:19571-19590 Msa1446780:intron 5.0%
!!! AACTTTTAAAATTTTTAATT+GGG + tig0031493:19572-19591 Msa1446780:intron 5.0%
CAACAGATGAAGAGAAGCGG+CGG - tig0031493:18925-18944 None:intergenic 50.0%
AAGAGGAAGAGAAGTGACGG+TGG - tig0031493:18975-18994 None:intergenic 50.0%
AGAAGCGGTGACAGCAAAAG+AGG - tig0031493:18992-19011 None:intergenic 50.0%
GTAGAACACAACAACGGCGA+CGG - tig0031493:19121-19140 None:intergenic 50.0%
GCAGCAAGAGAGAGAGAAAG+AGG - tig0031493:19237-19256 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - tig0031493:19276-19295 None:intergenic 50.0%
!!! CTTCGGTGCTCCCATTTTCT+TGG - tig0031493:19614-19633 None:intergenic 50.0%
!! ACCGAAGAAAAGCGCTGCTA+GGG + tig0031493:19627-19646 Msa1446780:CDS 50.0%
! ACCCTAGCAGCGCTTTTCTT+CGG - tig0031493:19631-19650 None:intergenic 50.0%
GAACACGAACAAGCTCATCG+TGG - tig0031493:19663-19682 None:intergenic 50.0%
GCTTGTTCGTGTTCCGTTAC+AGG + tig0031493:19669-19688 Msa1446780:CDS 50.0%
TCCGTTACAGGCGATTCTGT+TGG + tig0031493:19681-19700 Msa1446780:CDS 50.0%
GCCAACAGAATCGCCTGTAA+CGG - tig0031493:19685-19704 None:intergenic 50.0%
! TTGGGGCGTTCAAGAGTGAT+AGG - tig0031493:19733-19752 None:intergenic 50.0%
TATCACTCTTGAACGCCCCA+AGG + tig0031493:19732-19751 Msa1446780:CDS 50.0%
ATATCGGACCCTGCATATGC+GGG + tig0031493:19923-19942 Msa1446780:intron 50.0%
GGGCATGTAGAGATGTAGCT+AGG + tig0031493:20312-20331 Msa1446780:intron 50.0%
! CTTTTCCGACTAAGCGGGAT+CGG - tig0031493:20466-20485 None:intergenic 50.0%
! GAAGGCTTTTCCGACTAAGC+GGG - tig0031493:20471-20490 None:intergenic 50.0%
!! TATGAATGTGTTGGCTCCGC+TGG + tig0031493:21607-21626 Msa1446780:intron 50.0%
!! ATGAATGTGTTGGCTCCGCT+GGG + tig0031493:21608-21627 Msa1446780:intron 50.0%
GTAGTTAGAGAGGGAAAGGC+TGG - tig0031493:21814-21833 None:intergenic 50.0%
! AGTCGAGACTGATGGATAGC+TGG - tig0031493:22764-22783 None:intergenic 50.0%
GCTATCCATCAGTCTCGACT+TGG + tig0031493:22764-22783 Msa1446780:CDS 50.0%
CTTGTCATGGTGCAGAGAGA+GGG - tig0031493:22912-22931 None:intergenic 50.0%
CCTAGCATAGCCCAATCATG+AGG - tig0031493:23177-23196 None:intergenic 50.0%
CCTCATGATTGGGCTATGCT+AGG + tig0031493:23174-23193 Msa1446780:intron 50.0%
GCAGACCTACATTTCGTCTG+AGG + tig0031493:23645-23664 Msa1446780:intron 50.0%
TCCTTGCAGCATAATCTGCG+CGG - tig0031493:23951-23970 None:intergenic 50.0%
CAAGGAATATACCGTGGCTC+GGG + tig0031493:24084-24103 Msa1446780:CDS 50.0%
! AATATACCGTGGCTCGGGTA+TGG + tig0031493:24089-24108 Msa1446780:intron 50.0%
TTTCATCCATACCCGAGCCA+CGG - tig0031493:24098-24117 None:intergenic 50.0%
TTTGCATCCTACTCCGACGA+CGG - tig0031493:24515-24534 None:intergenic 50.0%
GGCATGCCATTGTATGTGAG+GGG + tig0031493:24608-24627 Msa1446780:CDS 50.0%
GCATGCCATTGTATGTGAGG+GGG + tig0031493:24609-24628 Msa1446780:CDS 50.0%
TTTCCAGGTTGTAGTTGGGC+AGG + tig0031493:25105-25124 Msa1446780:intron 50.0%
TCGTCGCTATCTTCCTCAAC+CGG - tig0031493:25175-25194 None:intergenic 50.0%
! GTGGTTTGGGCCCAGTAATT+GGG - tig0031493:25576-25595 None:intergenic 50.0%
! TGTGGTTTGGGCCCAGTAAT+TGG - tig0031493:25577-25596 None:intergenic 50.0%
CTAGAAGCCTGTAGAAGCTG+TGG + tig0031493:25609-25628 Msa1446780:intron 50.0%
TTCTGACTGCTTCACCGTCT+AGG - tig0031493:25704-25723 None:intergenic 50.0%
GGTAGGAGTTCTCTGAACTC+TGG + tig0031493:25780-25799 Msa1446780:intron 50.0%
! CTTATCCACTGTGCTGGTGA+TGG - tig0031493:26623-26642 None:intergenic 50.0%
!! CGGAACAAACCTCTGAAGCA+GGG - tig0031493:26690-26709 None:intergenic 50.0%
! CCTGCTTCAGAGGTTTGTTC+CGG + tig0031493:26688-26707 Msa1446780:intron 50.0%
AAGGTCCAGGGTTCAAACCA+CGG - tig0031493:27211-27230 None:intergenic 50.0%
! TGAGCTTAGCTCGGTTGGTA+GGG - tig0031493:27253-27272 None:intergenic 50.0%
!! TTGGTGGGGCTGGTTATGTT+TGG + tig0031493:27615-27634 Msa1446780:CDS 50.0%
AATGCCTCCACTCTTCCTCA+TGG - tig0031493:27658-27677 None:intergenic 50.0%
TTAGGTAACAGCTCCCCAGA+AGG - tig0031493:27773-27792 None:intergenic 50.0%
! CTAACCGACTCAACGGAGTT+AGG + tig0031493:28310-28329 Msa1446780:intron 50.0%
TAGGGTCAGTTGAGGTTGGA+TGG - tig0031493:28523-28542 None:intergenic 50.0%
CTTAGCATTACCCCACTAGG+AGG - tig0031493:29416-29435 None:intergenic 50.0%
CCACTTAGCATTACCCCACT+AGG - tig0031493:29419-29438 None:intergenic 50.0%
CCTAGTGGGGTAATGCTAAG+TGG + tig0031493:29416-29435 Msa1446780:intron 50.0%
TCTGAATGATACGGACGAGC+AGG + tig0031493:29639-29658 Msa1446780:CDS 50.0%
GGAAGATGAGAAGAAAGGCG+CGG + tig0031493:30592-30611 Msa1446780:CDS 50.0%
!! TTGTCGAGGTGCTGTCATCT+TGG + tig0031493:30860-30879 Msa1446780:three_prime_UTR 50.0%
!! TGTCGAGGTGCTGTCATCTT+GGG + tig0031493:30861-30880 Msa1446780:three_prime_UTR 50.0%
TGTCATCTTGGGAGCTCAAG+AGG + tig0031493:30872-30891 Msa1446780:three_prime_UTR 50.0%
GTCATCTTGGGAGCTCAAGA+GGG + tig0031493:30873-30892 Msa1446780:three_prime_UTR 50.0%
GGAGGAGTAGAGAGAAGCGA+CGG - tig0031493:18954-18973 None:intergenic 55.0%
AGGAAGAGAAGTGACGGTGG+AGG - tig0031493:18972-18991 None:intergenic 55.0%
!! CACCGAAGAAAAGCGCTGCT+AGG + tig0031493:19626-19645 Msa1446780:CDS 55.0%
! AAGCGCTGCTAGGGTTTCAG+AGG + tig0031493:19636-19655 Msa1446780:CDS 55.0%
CTAGAGCTCCCGCATATGCA+GGG - tig0031493:19934-19953 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - tig0031493:19935-19954 None:intergenic 55.0%
ACTAAGCGGGATCGGCTACA+TGG - tig0031493:20458-20477 None:intergenic 55.0%
TGTAGCCGATCCCGCTTAGT+CGG + tig0031493:20458-20477 Msa1446780:intron 55.0%
CGGTACCAAGTCGAGACTGA+TGG - tig0031493:22772-22791 None:intergenic 55.0%
TCATGGTGCAGAGAGAGGGA+AGG - tig0031493:22908-22927 None:intergenic 55.0%
GCTTGTCATGGTGCAGAGAG+AGG - tig0031493:22913-22932 None:intergenic 55.0%
CTCTCTGCACCATGACAAGC+AGG + tig0031493:22913-22932 Msa1446780:CDS 55.0%
GGGCACCTCAGACGAAATGT+AGG - tig0031493:23653-23672 None:intergenic 55.0%
TCCGCGCAGATTATGCTGCA+AGG + tig0031493:23947-23966 Msa1446780:CDS 55.0%
!! TCAGGATCTGCTCTGGAACC+TGG + tig0031493:24643-24662 Msa1446780:CDS 55.0%
ACTCCTGCCCAACTACAACC+TGG - tig0031493:25111-25130 None:intergenic 55.0%
TCTACTACAGCAGCCGGTTG+AGG + tig0031493:25159-25178 Msa1446780:CDS 55.0%
AAGCCTGTAGAAGCTGTGGG+AGG + tig0031493:25613-25632 Msa1446780:intron 55.0%
AGCCTGTAGAAGCTGTGGGA+GGG + tig0031493:25614-25633 Msa1446780:intron 55.0%
TTCCCTCCCACAGCTTCTAC+AGG - tig0031493:25619-25638 None:intergenic 55.0%
!! CCGGAACAAACCTCTGAAGC+AGG - tig0031493:26691-26710 None:intergenic 55.0%
GTGAGCTTAGCTCGGTTGGT+AGG - tig0031493:27254-27273 None:intergenic 55.0%
CCTTGTGAGCTTAGCTCGGT+TGG - tig0031493:27258-27277 None:intergenic 55.0%
CCAACCGAGCTAAGCTCACA+AGG + tig0031493:27255-27274 Msa1446780:intron 55.0%
AAGGAGGCCATGAGGAAGAG+TGG + tig0031493:27648-27667 Msa1446780:CDS 55.0%
!! GGAAGAGTGGAGGCATTCAG+TGG + tig0031493:27661-27680 Msa1446780:CDS 55.0%
! AGTGCTGAACTGTGTGCCAC+TGG + tig0031493:29165-29184 Msa1446780:intron 55.0%
ACTAGGAGGAGTCAGCTCCA+TGG - tig0031493:29402-29421 None:intergenic 55.0%
! ATGGAGCTGACTCCTCCTAG+TGG + tig0031493:29401-29420 Msa1446780:intron 55.0%
! TGGAGCTGACTCCTCCTAGT+GGG + tig0031493:29402-29421 Msa1446780:intron 55.0%
! TGAGAAGAAAGGCGCGGATG+AGG + tig0031493:30598-30617 Msa1446780:CDS 55.0%
CAGATGAAGAGAAGCGGCGG+TGG - tig0031493:18922-18941 None:intergenic 60.0%
ACAACGGCGACGGCAATCGA+CGG - tig0031493:19111-19130 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + tig0031493:19939-19958 Msa1446780:intron 60.0%
CTGCTGTGCTCATGCGAAGC+AGG + tig0031493:21034-21053 Msa1446780:CDS 60.0%
GGGGCTCAACCTGCTTGTCA+TGG - tig0031493:22925-22944 None:intergenic 60.0%
TGCAGCCATCACCAGCACAG+TGG + tig0031493:26615-26634 Msa1446780:intron 60.0%
!! CAGCTAGGTTTTGGTGGGGC+TGG + tig0031493:27605-27624 Msa1446780:intron 60.0%
GAGGCCATGAGGAAGAGTGG+AGG + tig0031493:27651-27670 Msa1446780:CDS 60.0%
GGTAACAGCTCCCCAGAAGG+TGG - tig0031493:27770-27789 None:intergenic 60.0%
! GGAGCTGACTCCTCCTAGTG+GGG + tig0031493:29403-29422 Msa1446780:intron 60.0%
! GAAGAAAGGCGCGGATGAGG+CGG + tig0031493:30601-30620 Msa1446780:CDS 60.0%
AGAGAAGCGGCGGTGGCAGA+GGG - tig0031493:18915-18934 None:intergenic 65.0%
AAGAGAAGCGGCGGTGGCAG+AGG - tig0031493:18916-18935 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + tig0031493:19940-19959 Msa1446780:intron 65.0%
GGTGGCCGTGGTTTGAACCC+TGG + tig0031493:27203-27222 Msa1446780:intron 65.0%
Chromosome Type Strat End Strand Name
tig0031493 gene 18844 31165 18844 ID=Msa1446780;Name=Msa1446780
tig0031493 mRNA 18844 31165 18844 ID=Msa1446780-mRNA-1;Parent=Msa1446780;Name=Msa1446780-mRNA-1;_AED=0.08;_eAED=0.08;_QI=486|1|1|1|0.93|0.87|16|336|723
tig0031493 exon 18844 19326 18844 ID=Msa1446780-mRNA-1:exon:15542;Parent=Msa1446780-mRNA-1
tig0031493 exon 19616 19753 19616 ID=Msa1446780-mRNA-1:exon:15543;Parent=Msa1446780-mRNA-1
tig0031493 exon 20948 21178 20948 ID=Msa1446780-mRNA-1:exon:15544;Parent=Msa1446780-mRNA-1
tig0031493 exon 22620 22934 22620 ID=Msa1446780-mRNA-1:exon:15545;Parent=Msa1446780-mRNA-1
tig0031493 exon 23373 23480 23373 ID=Msa1446780-mRNA-1:exon:15546;Parent=Msa1446780-mRNA-1
tig0031493 exon 23916 24105 23916 ID=Msa1446780-mRNA-1:exon:15547;Parent=Msa1446780-mRNA-1
tig0031493 exon 24422 24684 24422 ID=Msa1446780-mRNA-1:exon:15548;Parent=Msa1446780-mRNA-1
tig0031493 exon 25112 25223 25112 ID=Msa1446780-mRNA-1:exon:15549;Parent=Msa1446780-mRNA-1
tig0031493 exon 26620 26699 26620 ID=Msa1446780-mRNA-1:exon:15550;Parent=Msa1446780-mRNA-1
tig0031493 exon 27608 27850 27608 ID=Msa1446780-mRNA-1:exon:15551;Parent=Msa1446780-mRNA-1
tig0031493 exon 27927 28003 27927 ID=Msa1446780-mRNA-1:exon:15552;Parent=Msa1446780-mRNA-1
tig0031493 exon 28758 28849 28758 ID=Msa1446780-mRNA-1:exon:15553;Parent=Msa1446780-mRNA-1
tig0031493 exon 29578 29660 29578 ID=Msa1446780-mRNA-1:exon:15554;Parent=Msa1446780-mRNA-1
tig0031493 exon 29907 29978 29907 ID=Msa1446780-mRNA-1:exon:15555;Parent=Msa1446780-mRNA-1
tig0031493 exon 30536 30661 30536 ID=Msa1446780-mRNA-1:exon:15556;Parent=Msa1446780-mRNA-1
tig0031493 exon 30785 31165 30785 ID=Msa1446780-mRNA-1:exon:15557;Parent=Msa1446780-mRNA-1
tig0031493 five_prime_UTR 18844 19326 18844 ID=Msa1446780-mRNA-1:five_prime_utr;Parent=Msa1446780-mRNA-1
tig0031493 five_prime_UTR 19616 19618 19616 ID=Msa1446780-mRNA-1:five_prime_utr;Parent=Msa1446780-mRNA-1
tig0031493 CDS 19619 19753 19619 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 20948 21178 20948 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 22620 22934 22620 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 23373 23480 23373 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 23916 24105 23916 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 24422 24684 24422 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 25112 25223 25112 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 26620 26699 26620 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 27608 27850 27608 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 27927 28003 27927 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 28758 28849 28758 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 29578 29660 29578 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 29907 29978 29907 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 30536 30661 30536 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 CDS 30785 30829 30785 ID=Msa1446780-mRNA-1:cds;Parent=Msa1446780-mRNA-1
tig0031493 three_prime_UTR 30830 31165 30830 ID=Msa1446780-mRNA-1:three_prime_utr;Parent=Msa1446780-mRNA-1
Gene Sequence

>Msa1446780

ATGGGAGCACCGAAGAAAAGCGCTGCTAGGGTTTCAGAGGACCACGATGAGCTTGTTCGTGTTCCGTTACAGGCGATTCTGTTGGCTGATAGTTTTACTACCAAGTTTAGACCTATCACTCTTGAACGCCCCAAGGTGCTTTTACCATTGGCGAATGTTCCAATGATAAATTACACATTGACATGGCTTGAATCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTTACTGTAACAACTATTGAGTCTCAAAATTGTGTCAGTGCTGGAGATGCACTGCGTATTATATACGAGCGCAACGTGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACTGTAAGCAACATGTCGCTTACTCAGGCACTTTTAGAACATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACCATGGTTATTAAACGGTCAAAAACTCATCCAGCTATCCATCAGTCTCGACTTGGTACCGATGAAATTTTCATGGCTATTGATCCTAATACCAAGCAACTTTTGTATTACGAGGATAAAGCAGACTTCTCAAAAGGCACTCTACATCTTGAAAATTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCGCCGGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTTCGGCGTCATTTTGTCAAGGGACTGCTTCTTGATGATATAATGGGATACAAAATTTTTGTTCATGAAATCCGCGCAGATTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCACTGGTACCAGATGTTATGAATTTTGGCAACACAGCTACTAAGCTTGAAAGACAAGGAATATACCGTGGCTCGGATATTTCGCAAGCACAATCAGCTGTTGTTGGCCCATTCTCTGTTATAGGATCTGGCACCAAAATTGGCAAGAACACGAAGATTTTAAATTCCGTCGTCGGAGTAGGATGCAAAATCGGGTCAAATGTACACATAGAGGGATGCTATATATGGGACAATGTCACCATAGAAGATGGCTGTGAACTTAGGCATGCCATTGTATGTGAGGGGGTGATTATGAAATCAGGATCTGCTCTGGAACCTGGTGTTGTGCTGTCTTTTAAGGTTGTAGTTGGGCAGGAGTTTGTTGTTCCTCCTTATTCACAAGTATCTCTACTACAGCAGCCGGTTGAGGAAGATAGCGACGAAGAGCTCGAATATGCTGATAGTACTAGTGCCATCACCAGCACAGTGGATAAGTCAGATGGAGAAACTGCTTCTGAATTATTGGATGGACATTTTAACCCTGCTTCAGAGCTAGGTTTTGGTGGGGCTGGTTATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGAAGAGTGGAGGCATTCAGTGGCACCTATTACTGAAGATAAAATTTTGGAGGCAATGAAAGCTATGGAAGATGAACTGGAGTTAATTCATGATGGAAGTATTCTTCCACCTTCTGGGGAGCTGTTACCTAATCCTAATGATTCAGATGACGATGATAATGATGATTTAAGAGATGACTTTGACAAAGAGGTTGAAGCAACTTTTCTGAGGGCTGTGCTTGAAAACATACAAGAAAACCATTTGACTTTAGAAGTCAATTCTTTGAAGTTGTCATACAACAAGATAGCTGCTGATTGTGCTGGAGCTTTATTTTATGCAATGATGAAGTATGCTGTAGACTTGCCCCATAGTTCAGCTGATGGCTTGGTTCAGAATGTTCATGTTGTACTTACCAAGTGGAAAAAGGTTCTTGCATCCTATCTGAATGATACGGACGAGCAGATCGAAGTGATTCTAAAATTTGAAGAAATGTGTTTGGAATCTGCGAAGGAGTTTGCTCCATTGTTCACAAAGATATTGCACTACATGTATAACGAGGATATTATTGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGGCGCGGATGAGGCGGATAAAGTATTTGTTAACCAAGCTCAACCATTAATTCAATGGCTAAAAGAGGCTCCCGAAGAAGACGATGAAGACGAAGAGTAG
Protein sequence

>Msa1446780

MGAPKKSAARVSEDHDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLANVPMINYTLTWLESAGVEEVFVFCCAHAKQVINYLEKSEWFNQPNFTVTTIESQNCVSAGDALRIIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKTHPAIHQSRLGTDEIFMAIDPNTKQLLYYEDKADFSKGTLHLENSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIRADYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGIYRGSDISQAQSAVVGPFSVIGSGTKIGKNTKILNSVVGVGCKIGSNVHIEGCYIWDNVTIEDGCELRHAIVCEGVIMKSGSALEPGVVLSFKVVVGQEFVVPPYSQVSLLQQPVEEDSDEELEYADSTSAITSTVDKSDGETASELLDGHFNPASELGFGGAGYVWPKCEGGHEEEWRHSVAPITEDKILEAMKAMEDELELIHDGSILPPSGELLPNPNDSDDDDNDDLRDDFDKEVEATFLRAVLENIQENHLTLEVNSLKLSYNKIAADCAGALFYAMMKYAVDLPHSSADGLVQNVHVVLTKWKKVLASYLNDTDEQIEVILKFEEMCLESAKEFAPLFTKILHYMYNEDIIEEDAILSWEDEKKGADEADKVFVNQAQPLIQWLKEAPEEDDEDEE*