AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1190990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1190990 MtrunA17_Chr8g0360371 89.251 307 29 3 1 307 1 303 4.04e-149 420
Msa1190990 MtrunA17_Chr2g0317231 68.033 122 38 1 1 122 3 123 1.08e-62 213
Msa1190990 MtrunA17_Chr2g0324711 41.379 290 146 7 7 275 8 294 2.57e-54 181
Msa1190990 MtrunA17_Chr2g0324721 46.409 181 78 4 1 175 4 171 9.92e-48 159
Msa1190990 MtrunA17_Chr8g0385031 38.489 278 147 6 1 260 1 272 1.17e-45 156
Msa1190990 MtrunA17_Chr8g0385021 37.165 261 124 6 1 232 1 250 1.56e-42 147
Msa1190990 MtrunA17_Chr4g0040291 51.887 106 51 0 20 125 21 126 2.83e-39 136
Msa1190990 MtrunA17_Chr8g0385041 40.183 219 102 7 22 231 23 221 5.79e-39 139
Msa1190990 MtrunA17_Chr4g0041811 46.281 121 63 2 7 125 15 135 8.10e-36 128
Msa1190990 MtrunA17_Chr1g0150131 45.455 121 63 2 8 125 9 129 9.00e-35 124
Msa1190990 MtrunA17_Chr3g0136871 43.312 157 70 4 21 174 24 164 9.85e-35 124
Msa1190990 MtrunA17_Chr3g0127521 36.797 231 121 5 1 206 2 232 5.76e-32 120
Msa1190990 MtrunA17_Chr2g0331181 44.720 161 64 6 12 169 18 156 6.68e-32 117
Msa1190990 MtrunA17_Chr2g0319611 43.478 115 61 3 21 131 23 137 2.07e-30 115
Msa1190990 MtrunA17_Chr6g0458331 49.541 109 50 2 26 131 39 145 1.99e-29 110
Msa1190990 MtrunA17_Chr4g0039721 38.356 146 75 5 5 142 12 150 1.86e-27 105
Msa1190990 MtrunA17_Chr4g0062341 41.304 138 69 4 9 136 12 147 1.69e-26 102
Msa1190990 MtrunA17_Chr4g0062311 41.304 138 69 4 9 136 12 147 1.69e-26 102
Msa1190990 MtrunA17_Chr7g0256441 37.580 157 62 5 21 174 24 147 2.79e-23 93.6
Msa1190990 MtrunA17_Chr5g0394321 30.769 156 106 1 7 162 9 162 4.00e-23 94.0
Msa1190990 MtrunA17_Chr4g0073901 34.167 120 74 4 7 121 10 129 7.84e-20 85.1
Msa1190990 MtrunA17_Chr2g0323021 32.031 128 83 3 4 130 5 129 4.08e-18 81.6
Msa1190990 MtrunA17_Chr2g0289741 34.959 123 71 4 11 132 15 129 1.11e-17 79.0
Msa1190990 MtrunA17_Chr8g0379081 49.275 69 33 1 69 135 2 70 3.89e-17 76.3
Msa1190990 MtrunA17_Chr4g0073921 34.146 123 77 4 5 123 9 131 6.50e-17 79.0
Msa1190990 MtrunA17_Chr4g0064041 37.000 100 61 1 24 121 191 290 7.56e-17 80.1
Msa1190990 MtrunA17_Chr4g0064041 31.111 135 84 2 10 135 8 142 2.64e-16 78.6
Msa1190990 MtrunA17_Chr2g0306461 35.043 117 73 3 7 121 10 125 1.76e-16 76.6
Msa1190990 MtrunA17_Chr5g0440711 34.307 137 83 5 4 137 9 141 3.01e-16 74.3
Msa1190990 MtrunA17_Chr1g0188981 31.731 104 68 1 21 121 26 129 1.03e-15 74.3
Msa1190990 MtrunA17_Chr1g0205701 31.250 112 77 0 11 122 12 123 1.65e-15 73.6
Msa1190990 MtrunA17_Chr8g0387804 32.258 124 78 2 4 121 4 127 1.88e-15 71.6
Msa1190990 MtrunA17_Chr3g0132431 34.752 141 85 4 1 138 1 137 4.02e-15 72.4
Msa1190990 MtrunA17_Chr4g0064031 36.290 124 73 4 16 134 20 142 9.03e-15 70.9
Msa1190990 MtrunA17_Chr4g0033131 31.387 137 81 5 7 137 10 139 1.32e-14 70.5
Msa1190990 MtrunA17_Chr4g0033531 31.387 137 81 5 7 137 10 139 1.32e-14 70.5
Msa1190990 MtrunA17_Chr6g0453921 36.232 138 79 5 1 135 17 148 3.33e-14 69.7
Msa1190990 MtrunA17_Chr1g0196801 33.566 143 85 4 18 153 17 156 3.65e-14 69.7
Msa1190990 MtrunA17_Chr8g0335531 37.736 159 81 8 5 153 6 156 4.93e-14 69.3
Msa1190990 MtrunA17_Chr1g0211101 30.172 116 78 2 3 117 12 125 8.46e-14 68.6
Msa1190990 MtrunA17_Chr3g0132441 37.097 124 71 4 1 121 1 120 6.00e-13 66.2
Msa1190990 MtrunA17_Chr8g0335571 35.833 120 71 4 5 122 6 121 6.89e-13 66.2
Msa1190990 MtrunA17_Chr6g0453801 36.667 120 70 4 5 121 15 131 8.05e-13 65.5
Msa1190990 MtrunA17_Chr7g0253641 31.667 120 76 3 5 122 7 122 8.17e-12 63.9
Msa1190990 MtrunA17_Chr6g0481491 31.933 119 74 3 3 121 11 122 1.16e-11 63.2
Msa1190990 MtrunA17_Chr3g0132511 35.000 100 62 2 23 121 25 122 2.50e-11 62.4
Msa1190990 MtrunA17_Chr6g0483981 32.927 164 95 6 7 163 8 163 3.53e-11 63.9
Msa1190990 MtrunA17_Chr6g0459441 34.021 97 60 3 26 121 28 121 4.96e-11 60.8
Msa1190990 MtrunA17_Chr3g0132411 32.743 113 72 3 5 117 47 155 1.00e-10 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1190990 AT4G27520.1 54.198 131 56 1 1 127 4 134 1.01e-49 169
Msa1190990 AT5G53870.2 47.917 192 82 5 8 197 12 187 2.35e-49 168
Msa1190990 AT5G53870.1 47.917 192 82 5 8 197 12 187 2.63e-49 168
Msa1190990 AT4G28365.1 46.409 181 86 5 1 173 5 182 1.56e-47 158
Msa1190990 AT4G32490.1 50.926 108 53 0 16 123 23 130 3.95e-41 142
Msa1190990 AT2G25060.1 43.678 174 76 5 4 174 13 167 6.94e-38 133
Msa1190990 AT4G31840.1 46.259 147 75 3 5 148 8 153 1.38e-36 129
Msa1190990 AT3G20570.1 37.356 174 90 3 9 163 15 188 2.61e-35 127
Msa1190990 AT4G30590.1 42.105 152 81 3 1 145 1 152 2.44e-33 121
Msa1190990 AT5G57920.1 44.954 109 57 2 19 124 18 126 2.44e-32 118
Msa1190990 AT5G57920.2 39.568 139 79 3 8 141 6 144 2.53e-32 118
Msa1190990 AT5G57920.3 42.188 128 69 3 19 141 50 177 9.08e-32 118
Msa1190990 AT5G25090.1 43.802 121 65 2 8 125 10 130 1.61e-31 116
Msa1190990 AT2G23990.1 44.094 127 67 3 5 127 8 134 4.61e-30 113
Msa1190990 AT1G48940.1 45.902 122 56 3 5 122 11 126 2.53e-27 105
Msa1190990 AT1G79800.1 39.073 151 74 5 4 146 11 151 6.19e-26 102
Msa1190990 AT2G23990.2 39.041 146 66 4 5 127 8 153 1.76e-25 102
Msa1190990 AT5G14345.1 44.545 110 55 3 28 134 20 126 2.51e-25 99.4
Msa1190990 AT3G18590.1 45.082 122 60 3 5 122 9 127 4.02e-25 99.8
Msa1190990 AT2G31050.1 39.450 109 65 1 26 134 31 138 4.18e-20 86.7
Msa1190990 AT5G26330.1 34.513 113 74 0 12 124 12 124 3.98e-18 80.9
Msa1190990 AT2G26720.1 37.113 97 60 1 26 122 31 126 7.62e-17 78.2
Msa1190990 AT5G07475.1 31.507 146 93 4 1 143 7 148 8.73e-17 77.4
Msa1190990 AT2G32300.1 32.117 137 90 2 10 145 12 146 5.10e-16 76.6
Msa1190990 AT2G32300.2 32.117 137 90 2 10 145 42 176 7.84e-15 73.9
Msa1190990 AT3G17675.1 30.252 119 79 2 5 121 11 127 8.18e-15 70.5
Msa1190990 AT3G60270.1 36.893 103 60 3 21 122 23 121 3.72e-14 70.1
Msa1190990 AT5G15350.1 35.000 120 73 3 23 140 28 144 1.03e-13 68.6
Msa1190990 AT1G64640.1 31.933 119 79 2 24 141 33 150 3.78e-13 67.4
Msa1190990 AT4G12880.1 34.653 101 61 3 23 121 28 125 4.49e-12 63.2
Msa1190990 AT2G27035.1 30.070 143 84 5 10 151 15 142 8.27e-12 63.2
Msa1190990 AT5G20230.1 32.353 102 66 2 23 122 24 124 9.10e-12 63.5
Msa1190990 AT1G72230.1 33.613 119 68 3 3 121 10 117 1.35e-11 62.8
Msa1190990 AT3G27200.1 29.600 125 82 4 1 122 1 122 2.53e-11 62.0

Find 138 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGCTCCTTCGAGCTTTC+TGG 0.120831 8_1:-34420121 Msa1190990:CDS
CTTGGTGAAGGAGATGATTT+TGG 0.279381 8_1:+34420594 None:intergenic
CCATCTTCGAATTTCTTGAT+TGG 0.318575 8_1:+34420732 None:intergenic
CCCTGGAGTCGCTGCTCCCC+CGG 0.321676 8_1:+34420248 None:intergenic
GGTCCTCCGGCTCCAGGACC+CGG 0.322983 8_1:-34420267 Msa1190990:CDS
TACCTATAGTGTCACTGATT+TGG 0.323312 8_1:+34421340 None:intergenic
GCCGGAACAGGGGAGCTTGC+TGG 0.329366 8_1:+34420483 None:intergenic
CCCCGCTGGAGCGGCTCCCC+CGG 0.330921 8_1:+34420191 None:intergenic
CATCTTCGAATTTCTTGATT+GGG 0.341423 8_1:+34420733 None:intergenic
GGACCACCTGCTGGGGTAGA+TGG 0.356874 8_1:+34420285 None:intergenic
GGAGCCGGAGGACCACCTGC+TGG 0.368310 8_1:+34420276 None:intergenic
TCCAGCAAGCTCCCCTGTTC+CGG 0.374050 8_1:-34420484 Msa1190990:CDS
ACTCCAGGGGCACCAGGACC+CGG 0.378684 8_1:-34420234 Msa1190990:CDS
GTAGGTCCACCAGCCGGAAC+AGG 0.383142 8_1:+34420471 None:intergenic
TCCTGGTGTCCCTGATCCCC+CGG 0.386729 8_1:+34420215 None:intergenic
ATCAGGGACACCAGGACCCG+GGG 0.407662 8_1:-34420208 Msa1190990:CDS
ACAAAGGGATTGACTTGAGT+TGG 0.409385 8_1:+34421634 None:intergenic
AGCTCCCCTGTTCCGGCTGG+TGG 0.411187 8_1:-34420477 Msa1190990:CDS
ACCTGTTCCTTCCAGCCCAC+TGG 0.419128 8_1:+34421364 None:intergenic
TCCACCAACGAAATACTTGA+AGG 0.422626 8_1:+34421425 None:intergenic
GCCGCTCCAGCGGGGTCACC+AGG 0.425799 8_1:-34420183 Msa1190990:CDS
GTCCTCCGGCTCCAGGACCC+GGG 0.434272 8_1:-34420266 Msa1190990:CDS
ATCTAATTCAACTGCACCAC+CGG 0.438406 8_1:-34420160 Msa1190990:CDS
AAAAGATCAAAACTGTGAAA+AGG 0.439027 8_1:-34420658 Msa1190990:CDS
CTCCAGGGGCACCAGGACCC+GGG 0.448613 8_1:-34420233 Msa1190990:CDS
AGCACCAACGGCAAGGGTTG+CGG 0.449999 8_1:+34420092 None:intergenic
GGATCAGGGACACCAGGACC+CGG 0.450156 8_1:-34420210 Msa1190990:CDS
ACCTCCAGCCGGTGGACCTA+TGG 0.450407 8_1:-34420361 Msa1190990:CDS
GCCTTCAAGTATTTCGTTGG+TGG 0.451428 8_1:-34421426 Msa1190990:CDS
CCACCTGCTGGTGAAGGAGC+TGG 0.452499 8_1:+34420309 None:intergenic
AAAGATCAAAACTGTGAAAA+GGG 0.454501 8_1:-34420657 Msa1190990:CDS
GAGAATTACAACCAGTGGGC+TGG 0.458809 8_1:-34421375 Msa1190990:CDS
GAGCCGGAGGACCACCTGCT+GGG 0.459286 8_1:+34420277 None:intergenic
GCTGGAGGTGTGCTCACTAC+TGG 0.459593 8_1:+34420375 None:intergenic
ACCTCCGGCTGGTGGACCTA+TGG 0.461437 8_1:-34420418 Msa1190990:CDS
TCTCCTTCACCAAGTGGTGG+TGG 0.464912 8_1:-34420585 Msa1190990:CDS
GCCGGAGGTGTGCTCACTAC+TGG 0.466620 8_1:+34420432 None:intergenic
GCAGGTGGTCCTCCGGCTCC+AGG 0.469719 8_1:-34420273 Msa1190990:CDS
GCAAGCTCCCCTGTTCCGGC+TGG 0.470059 8_1:-34420480 Msa1190990:CDS
ACCAGTGGGCTGGAAGGAAC+AGG 0.473167 8_1:-34421365 Msa1190990:CDS
GATCAGGGACACCAGGACCC+GGG 0.484770 8_1:-34420209 Msa1190990:CDS
CAAAGGGATTGACTTGAGTT+GGG 0.485619 8_1:+34421635 None:intergenic
CAAGTATTTCGTTGGTGGAA+AGG 0.487435 8_1:-34421421 Msa1190990:CDS
GGGGTAGATGGACCACCTGC+TGG 0.492892 8_1:+34420297 None:intergenic
TTTCCACTGATGAAATAGAA+TGG 0.497104 8_1:+34420678 None:intergenic
GCAGCGACTCCAGGGGCACC+AGG 0.499399 8_1:-34420240 Msa1190990:CDS
TATGGCTTCATCTCCTTCTC+CGG 0.503605 8_1:-34420343 Msa1190990:CDS
GGAGCTGGTGGTCCACCTGC+CGG 0.504880 8_1:+34420324 None:intergenic
TATTTCGTTGGTGGAAAGGA+TGG 0.506955 8_1:-34421417 Msa1190990:CDS
GGTGGTCCACCTGCCGGAGA+AGG 0.507316 8_1:+34420330 None:intergenic
GAGTTCACTTTGGACAGAGC+AGG 0.508058 8_1:-34420702 Msa1190990:CDS
TCCTCCGGCTCCAGGACCCG+GGG 0.508521 8_1:-34420265 Msa1190990:CDS
GCTTCATCTCCTTCTCCGGC+AGG 0.510071 8_1:-34420339 Msa1190990:CDS
TTAGATCCTGGTGACCCCGC+TGG 0.511126 8_1:+34420177 None:intergenic
ATATTGAATTGAATGGATAT+AGG 0.511378 8_1:+34421526 None:intergenic
TACCCCAGCAGGTGGTCCTC+CGG 0.511478 8_1:-34420280 Msa1190990:CDS
CAAGCCTTCAAGTATTTCGT+TGG 0.517033 8_1:-34421429 Msa1190990:CDS
TCCAGGGGCACCAGGACCCG+GGG 0.517503 8_1:-34420232 Msa1190990:CDS
TATTCCGCAACCCTTGCCGT+TGG 0.520673 8_1:-34420096 Msa1190990:CDS
GTGAAGGATATTGAATTGAA+TGG 0.524878 8_1:+34421519 None:intergenic
CCACCAGCTCCTTCACCAGC+AGG 0.525764 8_1:-34420312 Msa1190990:CDS
TTCCAAATCAGTGACACTAT+AGG 0.526349 8_1:-34421342 Msa1190990:intron
CACTGGTTGTAATTCTCAGA+AGG 0.527393 8_1:+34421381 None:intergenic
GGTGGTCCATCTACCCCAGC+AGG 0.528795 8_1:-34420291 Msa1190990:CDS
CCAATCAAGAAATTCGAAGA+TGG 0.535933 8_1:-34420732 Msa1190990:CDS
GTACTATGTGATGTGTTGTA+TGG 0.536216 8_1:+34421589 None:intergenic
ACAACCACTCCATCACCCTC+TGG 0.541209 8_1:-34420534 Msa1190990:CDS
GTGAAGAGAACAAAGAAGAG+AGG 0.543513 8_1:+34421471 None:intergenic
CTTGCTGGAGGAATAGCCGC+TGG 0.545733 8_1:+34420498 None:intergenic
TCAGGGACACCAGGACCCGG+GGG 0.547872 8_1:-34420207 Msa1190990:CDS
TGTGATGTGTTGTATGGTAA+AGG 0.550026 8_1:+34421595 None:intergenic
CTCACTACTGGAGATGGAGA+TGG 0.551978 8_1:+34420387 None:intergenic
GTGAGCACACCTCCGGCTGG+TGG 0.552623 8_1:-34420426 Msa1190990:CDS
TCCTGGTGACCCCGCTGGAG+CGG 0.558755 8_1:+34420182 None:intergenic
TCCAGTAGTGAGCACACCTC+CGG 0.562951 8_1:-34420433 Msa1190990:CDS
GGTGTGCTCACTACTGGAGA+TGG 0.563208 8_1:+34420438 None:intergenic
GAAGCCATAGGTCCACCGGC+TGG 0.563900 8_1:+34420357 None:intergenic
TGTTCCGGCTGGTGGACCTA+CGG 0.567370 8_1:-34420469 Msa1190990:CDS
TCATCTCCTTCTCCGGCAGG+TGG 0.568679 8_1:-34420336 Msa1190990:CDS
TAGGTCCACCAGCCGGAACA+GGG 0.568683 8_1:+34420472 None:intergenic
GGTCCATCTACCCCAGCAGG+TGG 0.568822 8_1:-34420288 Msa1190990:CDS
CTCCATAGCAAAATGTGTGA+AGG 0.568998 8_1:+34421503 None:intergenic
GTATGGTAAAGGAAATTGAA+TGG 0.573547 8_1:+34421606 None:intergenic
CCTGCTGGTGAAGGAGCTGG+TGG 0.574961 8_1:+34420312 None:intergenic
GGGCCATTCTATTTCATCAG+TGG 0.577208 8_1:-34420681 Msa1190990:CDS
GATGGACCACCTGCTGGTGA+AGG 0.578374 8_1:+34420303 None:intergenic
AGCCGGAGGACCACCTGCTG+GGG 0.579158 8_1:+34420278 None:intergenic
AAACAGAGCACCAACGGCAA+GGG 0.581779 8_1:+34420086 None:intergenic
AGTTCACTTTGGACAGAGCA+GGG 0.582623 8_1:-34420701 Msa1190990:CDS
GAAGGGTTCAGACTCGGTGT+TGG 0.583480 8_1:-34420796 Msa1190990:CDS
AGATGAAGCCATAGGTCCAC+CGG 0.584657 8_1:+34420353 None:intergenic
GGTGTGCTCACTACTGGAGA+TGG 0.585001 8_1:+34420381 None:intergenic
AAAACAGAGCACCAACGGCA+AGG 0.585538 8_1:+34420085 None:intergenic
GTAGTGAGCACACCTCCGGC+TGG 0.586869 8_1:-34420429 Msa1190990:CDS
GGAGGAATAGCCGCTGGAGA+TGG 0.587071 8_1:+34420504 None:intergenic
GTTGTCGTTGGTGACGGTGA+AGG 0.587432 8_1:+34420552 None:intergenic
ACTGGTTGTAATTCTCAGAA+GGG 0.589662 8_1:+34421382 None:intergenic
GGTGATGGAGTGGTTGTCGT+TGG 0.590401 8_1:+34420540 None:intergenic
GGTGGTGAACCAGAGGGTGA+TGG 0.593176 8_1:+34420525 None:intergenic
TCGTTGGTGGAAAGGATGGA+TGG 0.594920 8_1:-34421413 Msa1190990:CDS
GGTGATAAGCCACCACCACT+TGG 0.595997 8_1:+34420576 None:intergenic
GGAGTGGTTGTCGTTGGTGA+CGG 0.597376 8_1:+34420546 None:intergenic
ACAAATGAACCACTGCTACC+CGG 0.604696 8_1:+34420141 None:intergenic
GTAGTGAGCACACCTCCAGC+CGG 0.608290 8_1:-34420372 Msa1190990:CDS
ATTACAACCAGTGGGCTGGA+AGG 0.611232 8_1:-34421371 Msa1190990:CDS
GTACAAGAAGGGTTCAGACT+CGG 0.611620 8_1:-34420802 Msa1190990:CDS
TGGTGATACAGAGTTCACTT+TGG 0.612356 8_1:-34420712 Msa1190990:CDS
GTCGTTGGTGACGGTGAAGG+TGG 0.613000 8_1:+34420555 None:intergenic
GCCATAGGTCCACCGGCTGG+AGG 0.614158 8_1:+34420360 None:intergenic
GTGAGCACACCTCCAGCCGG+TGG 0.614961 8_1:-34420369 Msa1190990:CDS
GGAGATGGAGATGATGCCAT+AGG 0.617212 8_1:+34420402 None:intergenic
AAGCCACCACCACTTGGTGA+AGG 0.618943 8_1:+34420582 None:intergenic
TCTAATTCAACTGCACCACC+GGG 0.619239 8_1:-34420159 Msa1190990:CDS
TTCTGAGAATTACAACCAGT+GGG 0.619799 8_1:-34421379 Msa1190990:CDS
GCCATAGGTCCACCAGCCGG+AGG 0.620945 8_1:+34420417 None:intergenic
GGAACAGGGGAGCTTGCTGG+AGG 0.623639 8_1:+34420486 None:intergenic
AGGTCCACCAGCCGGAACAG+GGG 0.624119 8_1:+34420473 None:intergenic
GGTGCAGTTGAATTAGATCC+TGG 0.624618 8_1:+34420165 None:intergenic
ACTGCACCACCGGGTAGCAG+TGG 0.628398 8_1:-34420150 Msa1190990:CDS
TTCGTGGAGTTATAACAACA+AGG 0.629941 8_1:+34420622 None:intergenic
GATGCCATAGGTCCACCAGC+CGG 0.631786 8_1:+34420414 None:intergenic
CTTCTGAGAATTACAACCAG+TGG 0.634874 8_1:-34421380 Msa1190990:CDS
GGAGAAGGAGATGAAGCCAT+AGG 0.637297 8_1:+34420345 None:intergenic
CCAGCTCCTTCACCAGCAGG+TGG 0.640600 8_1:-34420309 Msa1190990:CDS
GAATACACCAGAAAGCTCGA+AGG 0.652876 8_1:+34420114 None:intergenic
GATGCCGTAGGTCCACCAGC+CGG 0.653292 8_1:+34420465 None:intergenic
GGAATAGCCGCTGGAGATGG+TGG 0.653879 8_1:+34420507 None:intergenic
CCTCCGGCTCCAGGACCCGG+GGG 0.661807 8_1:-34420264 Msa1190990:CDS
GGAGATGGAGATGATGCCGT+AGG 0.662452 8_1:+34420453 None:intergenic
TCATCTCCTTCACCAAGTGG+TGG 0.662715 8_1:-34420588 Msa1190990:CDS
AAATCATCTCCTTCACCAAG+TGG 0.664193 8_1:-34420591 Msa1190990:CDS
TGGAGATGGTGGTGAACCAG+AGG 0.665486 8_1:+34420518 None:intergenic
TGAACCAGAGGGTGATGGAG+TGG 0.667431 8_1:+34420530 None:intergenic
TCGTGGAGTTATAACAACAA+GGG 0.673218 8_1:+34420623 None:intergenic
CCAGGGGCACCAGGACCCGG+GGG 0.673519 8_1:-34420231 Msa1190990:CDS
TGGTTCACCACCATCTCCAG+CGG 0.707098 8_1:-34420514 Msa1190990:CDS
AATGAACCACTGCTACCCGG+TGG 0.713699 8_1:+34420144 None:intergenic
GGAGATGGTGGTGAACCAGA+GGG 0.713882 8_1:+34420519 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAATAATAAAGTG+GGG + chr8_1:34420497-34420516 None:intergenic 10.0%
!!! GTATATATCAAATTAATTTT+TGG - chr8_1:34420657-34420676 Msa1190990:CDS 10.0%
!! ATTAAAATAATAATAAAGTG+GGG + chr8_1:34420497-34420516 None:intergenic 10.0%
!!! GTATATATCAAATTAATTTT+TGG - chr8_1:34420657-34420676 Msa1190990:CDS 10.0%
!! AAATCACAATAATTTCTTTA+TGG - chr8_1:34420760-34420779 Msa1190990:CDS 15.0%
!!! AAAATTTTATAGGAAAAACA+AGG + chr8_1:34420910-34420929 None:intergenic 15.0%
!!! TTTAAGTTGCAAAATTTTAT+AGG + chr8_1:34420920-34420939 None:intergenic 15.0%
!! AAATCACAATAATTTCTTTA+TGG - chr8_1:34420760-34420779 Msa1190990:CDS 15.0%
!!! AAAATTTTATAGGAAAAACA+AGG + chr8_1:34420910-34420929 None:intergenic 15.0%
!!! TTTAAGTTGCAAAATTTTAT+AGG + chr8_1:34420920-34420939 None:intergenic 15.0%
!! AATTGAATGGAAAAAACAAA+GGG + chr8_1:34420184-34420203 None:intergenic 20.0%
!! AAATTGAATGGAAAAAACAA+AGG + chr8_1:34420185-34420204 None:intergenic 20.0%
!! ATATTGAATTGAATGGATAT+AGG + chr8_1:34420277-34420296 None:intergenic 20.0%
!!! ATCAAATTAATTTTTGGTCT+AGG - chr8_1:34420663-34420682 Msa1190990:CDS 20.0%
!!! TCAAATTAATTTTTGGTCTA+GGG - chr8_1:34420664-34420683 Msa1190990:CDS 20.0%
!!! TACGATCCTTTAATTTTTTA+TGG - chr8_1:34420855-34420874 Msa1190990:intron 20.0%
!! GAACAACCATAAAAAATTAA+AGG + chr8_1:34420864-34420883 None:intergenic 20.0%
!! AATTGAATGGAAAAAACAAA+GGG + chr8_1:34420184-34420203 None:intergenic 20.0%
!! AAATTGAATGGAAAAAACAA+AGG + chr8_1:34420185-34420204 None:intergenic 20.0%
!! ATATTGAATTGAATGGATAT+AGG + chr8_1:34420277-34420296 None:intergenic 20.0%
!!! ATCAAATTAATTTTTGGTCT+AGG - chr8_1:34420663-34420682 Msa1190990:CDS 20.0%
!!! TCAAATTAATTTTTGGTCTA+GGG - chr8_1:34420664-34420683 Msa1190990:CDS 20.0%
!!! TACGATCCTTTAATTTTTTA+TGG - chr8_1:34420855-34420874 Msa1190990:intron 20.0%
!! GAACAACCATAAAAAATTAA+AGG + chr8_1:34420864-34420883 None:intergenic 20.0%
! AGTTGAATATGTGTTTAGTT+TGG - chr8_1:34420704-34420723 Msa1190990:CDS 25.0%
!!! TTAGTTTGGATTTTGTTGTT+TGG - chr8_1:34420718-34420737 Msa1190990:CDS 25.0%
!!! TATAGTTTTCAAGTACAAGA+AGG - chr8_1:34420986-34421005 Msa1190990:intron 25.0%
!!! ATAGTTTTCAAGTACAAGAA+GGG - chr8_1:34420987-34421006 Msa1190990:intron 25.0%
! AAAAGATCAAAACTGTGAAA+AGG - chr8_1:34421142-34421161 Msa1190990:intron 25.0%
! AAAGATCAAAACTGTGAAAA+GGG - chr8_1:34421143-34421162 Msa1190990:intron 25.0%
! AGTTGAATATGTGTTTAGTT+TGG - chr8_1:34420704-34420723 Msa1190990:CDS 25.0%
!!! TTAGTTTGGATTTTGTTGTT+TGG - chr8_1:34420718-34420737 Msa1190990:CDS 25.0%
!!! TATAGTTTTCAAGTACAAGA+AGG - chr8_1:34420986-34421005 Msa1190990:intron 25.0%
!!! ATAGTTTTCAAGTACAAGAA+GGG - chr8_1:34420987-34421006 Msa1190990:intron 25.0%
! AAAAGATCAAAACTGTGAAA+AGG - chr8_1:34421142-34421161 Msa1190990:intron 25.0%
! AAAGATCAAAACTGTGAAAA+GGG - chr8_1:34421143-34421162 Msa1190990:intron 25.0%
GTATGGTAAAGGAAATTGAA+TGG + chr8_1:34420197-34420216 None:intergenic 30.0%
GTGAAGGATATTGAATTGAA+TGG + chr8_1:34420284-34420303 None:intergenic 30.0%
CTATGTAACATACAACTACA+TGG - chr8_1:34420528-34420547 Msa1190990:CDS 30.0%
ATTAAAGGATCGTACAATAG+AGG + chr8_1:34420849-34420868 None:intergenic 30.0%
CATCTTCGAATTTCTTGATT+GGG + chr8_1:34421070-34421089 None:intergenic 30.0%
TTTCCACTGATGAAATAGAA+TGG + chr8_1:34421125-34421144 None:intergenic 30.0%
GTATGGTAAAGGAAATTGAA+TGG + chr8_1:34420197-34420216 None:intergenic 30.0%
GTGAAGGATATTGAATTGAA+TGG + chr8_1:34420284-34420303 None:intergenic 30.0%
CTATGTAACATACAACTACA+TGG - chr8_1:34420528-34420547 Msa1190990:CDS 30.0%
ATTAAAGGATCGTACAATAG+AGG + chr8_1:34420849-34420868 None:intergenic 30.0%
CATCTTCGAATTTCTTGATT+GGG + chr8_1:34421070-34421089 None:intergenic 30.0%
TTTCCACTGATGAAATAGAA+TGG + chr8_1:34421125-34421144 None:intergenic 30.0%
TGTGATGTGTTGTATGGTAA+AGG + chr8_1:34420208-34420227 None:intergenic 35.0%
GTACTATGTGATGTGTTGTA+TGG + chr8_1:34420214-34420233 None:intergenic 35.0%
! ATCCTTCACACATTTTGCTA+TGG - chr8_1:34420295-34420314 Msa1190990:CDS 35.0%
ACTGGTTGTAATTCTCAGAA+GGG + chr8_1:34420421-34420440 None:intergenic 35.0%
! TTCTGAGAATTACAACCAGT+GGG - chr8_1:34420421-34420440 Msa1190990:CDS 35.0%
TTCCAAATCAGTGACACTAT+AGG - chr8_1:34420458-34420477 Msa1190990:CDS 35.0%
! TACCTATAGTGTCACTGATT+TGG + chr8_1:34420463-34420482 None:intergenic 35.0%
CCATCTTCGAATTTCTTGAT+TGG + chr8_1:34421071-34421090 None:intergenic 35.0%
CCAATCAAGAAATTCGAAGA+TGG - chr8_1:34421068-34421087 Msa1190990:intron 35.0%
TCGTGGAGTTATAACAACAA+GGG + chr8_1:34421180-34421199 None:intergenic 35.0%
TTCGTGGAGTTATAACAACA+AGG + chr8_1:34421181-34421200 None:intergenic 35.0%
TGTGATGTGTTGTATGGTAA+AGG + chr8_1:34420208-34420227 None:intergenic 35.0%
GTACTATGTGATGTGTTGTA+TGG + chr8_1:34420214-34420233 None:intergenic 35.0%
! ATCCTTCACACATTTTGCTA+TGG - chr8_1:34420295-34420314 Msa1190990:CDS 35.0%
ACTGGTTGTAATTCTCAGAA+GGG + chr8_1:34420421-34420440 None:intergenic 35.0%
! TTCTGAGAATTACAACCAGT+GGG - chr8_1:34420421-34420440 Msa1190990:CDS 35.0%
TTCCAAATCAGTGACACTAT+AGG - chr8_1:34420458-34420477 Msa1190990:CDS 35.0%
! TACCTATAGTGTCACTGATT+TGG + chr8_1:34420463-34420482 None:intergenic 35.0%
CCATCTTCGAATTTCTTGAT+TGG + chr8_1:34421071-34421090 None:intergenic 35.0%
CCAATCAAGAAATTCGAAGA+TGG - chr8_1:34421068-34421087 Msa1190990:intron 35.0%
TCGTGGAGTTATAACAACAA+GGG + chr8_1:34421180-34421199 None:intergenic 35.0%
TTCGTGGAGTTATAACAACA+AGG + chr8_1:34421181-34421200 None:intergenic 35.0%
!! CAAAGGGATTGACTTGAGTT+GGG + chr8_1:34420168-34420187 None:intergenic 40.0%
!! ACAAAGGGATTGACTTGAGT+TGG + chr8_1:34420169-34420188 None:intergenic 40.0%
CTCCATAGCAAAATGTGTGA+AGG + chr8_1:34420300-34420319 None:intergenic 40.0%
GTGAAGAGAACAAAGAAGAG+AGG + chr8_1:34420332-34420351 None:intergenic 40.0%
CAAGCCTTCAAGTATTTCGT+TGG - chr8_1:34420371-34420390 Msa1190990:CDS 40.0%
TCCACCAACGAAATACTTGA+AGG + chr8_1:34420378-34420397 None:intergenic 40.0%
! CAAGTATTTCGTTGGTGGAA+AGG - chr8_1:34420379-34420398 Msa1190990:CDS 40.0%
! TATTTCGTTGGTGGAAAGGA+TGG - chr8_1:34420383-34420402 Msa1190990:CDS 40.0%
! CACTGGTTGTAATTCTCAGA+AGG + chr8_1:34420422-34420441 None:intergenic 40.0%
! CTTCTGAGAATTACAACCAG+TGG - chr8_1:34420420-34420439 Msa1190990:CDS 40.0%
TGGTGATACAGAGTTCACTT+TGG - chr8_1:34421088-34421107 Msa1190990:intron 40.0%
! CTTGGTGAAGGAGATGATTT+TGG + chr8_1:34421209-34421228 None:intergenic 40.0%
AAATCATCTCCTTCACCAAG+TGG - chr8_1:34421209-34421228 Msa1190990:intron 40.0%
ATCTAATTCAACTGCACCAC+CGG - chr8_1:34421640-34421659 Msa1190990:five_prime_UTR 40.0%
! ACTCAAAAACAGAGCACCAA+CGG + chr8_1:34421723-34421742 None:intergenic 40.0%
!! CAAAGGGATTGACTTGAGTT+GGG + chr8_1:34420168-34420187 None:intergenic 40.0%
!! ACAAAGGGATTGACTTGAGT+TGG + chr8_1:34420169-34420188 None:intergenic 40.0%
CTCCATAGCAAAATGTGTGA+AGG + chr8_1:34420300-34420319 None:intergenic 40.0%
GTGAAGAGAACAAAGAAGAG+AGG + chr8_1:34420332-34420351 None:intergenic 40.0%
CAAGCCTTCAAGTATTTCGT+TGG - chr8_1:34420371-34420390 Msa1190990:CDS 40.0%
TCCACCAACGAAATACTTGA+AGG + chr8_1:34420378-34420397 None:intergenic 40.0%
! CAAGTATTTCGTTGGTGGAA+AGG - chr8_1:34420379-34420398 Msa1190990:CDS 40.0%
! TATTTCGTTGGTGGAAAGGA+TGG - chr8_1:34420383-34420402 Msa1190990:CDS 40.0%
! CACTGGTTGTAATTCTCAGA+AGG + chr8_1:34420422-34420441 None:intergenic 40.0%
! CTTCTGAGAATTACAACCAG+TGG - chr8_1:34420420-34420439 Msa1190990:CDS 40.0%
TGGTGATACAGAGTTCACTT+TGG - chr8_1:34421088-34421107 Msa1190990:intron 40.0%
! CTTGGTGAAGGAGATGATTT+TGG + chr8_1:34421209-34421228 None:intergenic 40.0%
AAATCATCTCCTTCACCAAG+TGG - chr8_1:34421209-34421228 Msa1190990:intron 40.0%
ATCTAATTCAACTGCACCAC+CGG - chr8_1:34421640-34421659 Msa1190990:five_prime_UTR 40.0%
! ACTCAAAAACAGAGCACCAA+CGG + chr8_1:34421723-34421742 None:intergenic 40.0%
GCCTTCAAGTATTTCGTTGG+TGG - chr8_1:34420374-34420393 Msa1190990:CDS 45.0%
GTACAAGAAGGGTTCAGACT+CGG - chr8_1:34420998-34421017 Msa1190990:intron 45.0%
AGTTCACTTTGGACAGAGCA+GGG - chr8_1:34421099-34421118 Msa1190990:intron 45.0%
GGGCCATTCTATTTCATCAG+TGG - chr8_1:34421119-34421138 Msa1190990:intron 45.0%
!!! GATGATTTTGGTGGTGTTCG+TGG + chr8_1:34421197-34421216 None:intergenic 45.0%
! GGTGAAGGAGATGATTTTGG+TGG + chr8_1:34421206-34421225 None:intergenic 45.0%
TATGGCTTCATCTCCTTCTC+CGG - chr8_1:34421457-34421476 Msa1190990:CDS 45.0%
GGTGCAGTTGAATTAGATCC+TGG + chr8_1:34421638-34421657 None:intergenic 45.0%
TCTAATTCAACTGCACCACC+GGG - chr8_1:34421641-34421660 Msa1190990:five_prime_UTR 45.0%
ACAAATGAACCACTGCTACC+CGG + chr8_1:34421662-34421681 None:intergenic 45.0%
GAATACACCAGAAAGCTCGA+AGG + chr8_1:34421689-34421708 None:intergenic 45.0%
GCCTTCAAGTATTTCGTTGG+TGG - chr8_1:34420374-34420393 Msa1190990:CDS 45.0%
GTACAAGAAGGGTTCAGACT+CGG - chr8_1:34420998-34421017 Msa1190990:intron 45.0%
AGTTCACTTTGGACAGAGCA+GGG - chr8_1:34421099-34421118 Msa1190990:intron 45.0%
GGGCCATTCTATTTCATCAG+TGG - chr8_1:34421119-34421138 Msa1190990:intron 45.0%
!!! GATGATTTTGGTGGTGTTCG+TGG + chr8_1:34421197-34421216 None:intergenic 45.0%
! GGTGAAGGAGATGATTTTGG+TGG + chr8_1:34421206-34421225 None:intergenic 45.0%
TATGGCTTCATCTCCTTCTC+CGG - chr8_1:34421457-34421476 Msa1190990:CDS 45.0%
GGTGCAGTTGAATTAGATCC+TGG + chr8_1:34421638-34421657 None:intergenic 45.0%
TCTAATTCAACTGCACCACC+GGG - chr8_1:34421641-34421660 Msa1190990:five_prime_UTR 45.0%
ACAAATGAACCACTGCTACC+CGG + chr8_1:34421662-34421681 None:intergenic 45.0%
GAATACACCAGAAAGCTCGA+AGG + chr8_1:34421689-34421708 None:intergenic 45.0%
!! AATTAAAATAATAATAAAGT+GGG + chr8_1:34420498-34420517 None:intergenic 5.0%
!! AAATTAAAATAATAATAAAG+TGG + chr8_1:34420499-34420518 None:intergenic 5.0%
!!! ATTTTTTTTTATTTTTTAGA+AGG - chr8_1:34420593-34420612 Msa1190990:CDS 5.0%
!! AATTAAAATAATAATAAAGT+GGG + chr8_1:34420498-34420517 None:intergenic 5.0%
!! AAATTAAAATAATAATAAAG+TGG + chr8_1:34420499-34420518 None:intergenic 5.0%
!!! ATTTTTTTTTATTTTTTAGA+AGG - chr8_1:34420593-34420612 Msa1190990:CDS 5.0%
! TCGTTGGTGGAAAGGATGGA+TGG - chr8_1:34420387-34420406 Msa1190990:CDS 50.0%
GAGAATTACAACCAGTGGGC+TGG - chr8_1:34420425-34420444 Msa1190990:CDS 50.0%
!! ATTACAACCAGTGGGCTGGA+AGG - chr8_1:34420429-34420448 Msa1190990:CDS 50.0%
GAGTTCACTTTGGACAGAGC+AGG - chr8_1:34421098-34421117 Msa1190990:intron 50.0%
TCATCTCCTTCACCAAGTGG+TGG - chr8_1:34421212-34421231 Msa1190990:intron 50.0%
GGAGATGGAGATGATGCCAT+AGG + chr8_1:34421401-34421420 None:intergenic 50.0%
CTCACTACTGGAGATGGAGA+TGG + chr8_1:34421359-34421378 None:intergenic 50.0%
AGATGAAGCCATAGGTCCAC+CGG + chr8_1:34421450-34421469 None:intergenic 50.0%
GGAGAAGGAGATGAAGCCAT+AGG + chr8_1:34421458-34421477 None:intergenic 50.0%
TGTAGCTCCTTCGAGCTTTC+TGG - chr8_1:34421679-34421698 Msa1190990:five_prime_UTR 50.0%
! AAACAGAGCACCAACGGCAA+GGG + chr8_1:34421717-34421736 None:intergenic 50.0%
! AAAACAGAGCACCAACGGCA+AGG + chr8_1:34421718-34421737 None:intergenic 50.0%
! TCGTTGGTGGAAAGGATGGA+TGG - chr8_1:34420387-34420406 Msa1190990:CDS 50.0%
GAGAATTACAACCAGTGGGC+TGG - chr8_1:34420425-34420444 Msa1190990:CDS 50.0%
!! ATTACAACCAGTGGGCTGGA+AGG - chr8_1:34420429-34420448 Msa1190990:CDS 50.0%
GAGTTCACTTTGGACAGAGC+AGG - chr8_1:34421098-34421117 Msa1190990:intron 50.0%
TCATCTCCTTCACCAAGTGG+TGG - chr8_1:34421212-34421231 Msa1190990:intron 50.0%
GGAGATGGAGATGATGCCAT+AGG + chr8_1:34421401-34421420 None:intergenic 50.0%
CTCACTACTGGAGATGGAGA+TGG + chr8_1:34421359-34421378 None:intergenic 50.0%
AGATGAAGCCATAGGTCCAC+CGG + chr8_1:34421450-34421469 None:intergenic 50.0%
GGAGAAGGAGATGAAGCCAT+AGG + chr8_1:34421458-34421477 None:intergenic 50.0%
TGTAGCTCCTTCGAGCTTTC+TGG - chr8_1:34421679-34421698 Msa1190990:five_prime_UTR 50.0%
! AAACAGAGCACCAACGGCAA+GGG + chr8_1:34421717-34421736 None:intergenic 50.0%
! AAAACAGAGCACCAACGGCA+AGG + chr8_1:34421718-34421737 None:intergenic 50.0%
!! GAAGGGTTCAGACTCGGTGT+TGG - chr8_1:34421004-34421023 Msa1190990:intron 55.0%
TCTCCTTCACCAAGTGGTGG+TGG - chr8_1:34421215-34421234 Msa1190990:intron 55.0%
! AAGCCACCACCACTTGGTGA+AGG + chr8_1:34421221-34421240 None:intergenic 55.0%
GGTGATAAGCCACCACCACT+TGG + chr8_1:34421227-34421246 None:intergenic 55.0%
!! GTTGTCGTTGGTGACGGTGA+AGG + chr8_1:34421251-34421270 None:intergenic 55.0%
! GGAGTGGTTGTCGTTGGTGA+CGG + chr8_1:34421257-34421276 None:intergenic 55.0%
!! GGTGATGGAGTGGTTGTCGT+TGG + chr8_1:34421263-34421282 None:intergenic 55.0%
ACAACCACTCCATCACCCTC+TGG - chr8_1:34421266-34421285 Msa1190990:intron 55.0%
!! TGAACCAGAGGGTGATGGAG+TGG + chr8_1:34421273-34421292 None:intergenic 55.0%
! GGAGATGGTGGTGAACCAGA+GGG + chr8_1:34421284-34421303 None:intergenic 55.0%
! TGGAGATGGTGGTGAACCAG+AGG + chr8_1:34421285-34421304 None:intergenic 55.0%
TGGTTCACCACCATCTCCAG+CGG - chr8_1:34421286-34421305 Msa1190990:intron 55.0%
GGAGATGGAGATGATGCCGT+AGG + chr8_1:34421350-34421369 None:intergenic 55.0%
GGTGTGCTCACTACTGGAGA+TGG + chr8_1:34421365-34421384 None:intergenic 55.0%
TCCAGTAGTGAGCACACCTC+CGG - chr8_1:34421367-34421386 Msa1190990:CDS 55.0%
GGTGTGCTCACTACTGGAGA+TGG + chr8_1:34421365-34421384 None:intergenic 55.0%
AATGAACCACTGCTACCCGG+TGG + chr8_1:34421659-34421678 None:intergenic 55.0%
TATTCCGCAACCCTTGCCGT+TGG - chr8_1:34421704-34421723 Msa1190990:five_prime_UTR 55.0%
!! GAAGGGTTCAGACTCGGTGT+TGG - chr8_1:34421004-34421023 Msa1190990:intron 55.0%
TCTCCTTCACCAAGTGGTGG+TGG - chr8_1:34421215-34421234 Msa1190990:intron 55.0%
! AAGCCACCACCACTTGGTGA+AGG + chr8_1:34421221-34421240 None:intergenic 55.0%
GGTGATAAGCCACCACCACT+TGG + chr8_1:34421227-34421246 None:intergenic 55.0%
!! GTTGTCGTTGGTGACGGTGA+AGG + chr8_1:34421251-34421270 None:intergenic 55.0%
! GGAGTGGTTGTCGTTGGTGA+CGG + chr8_1:34421257-34421276 None:intergenic 55.0%
!! GGTGATGGAGTGGTTGTCGT+TGG + chr8_1:34421263-34421282 None:intergenic 55.0%
ACAACCACTCCATCACCCTC+TGG - chr8_1:34421266-34421285 Msa1190990:intron 55.0%
!! TGAACCAGAGGGTGATGGAG+TGG + chr8_1:34421273-34421292 None:intergenic 55.0%
! GGAGATGGTGGTGAACCAGA+GGG + chr8_1:34421284-34421303 None:intergenic 55.0%
! TGGAGATGGTGGTGAACCAG+AGG + chr8_1:34421285-34421304 None:intergenic 55.0%
TGGTTCACCACCATCTCCAG+CGG - chr8_1:34421286-34421305 Msa1190990:intron 55.0%
GGAGATGGAGATGATGCCGT+AGG + chr8_1:34421350-34421369 None:intergenic 55.0%
GGTGTGCTCACTACTGGAGA+TGG + chr8_1:34421365-34421384 None:intergenic 55.0%
TCCAGTAGTGAGCACACCTC+CGG - chr8_1:34421367-34421386 Msa1190990:CDS 55.0%
GGTGTGCTCACTACTGGAGA+TGG + chr8_1:34421365-34421384 None:intergenic 55.0%
AATGAACCACTGCTACCCGG+TGG + chr8_1:34421659-34421678 None:intergenic 55.0%
TATTCCGCAACCCTTGCCGT+TGG - chr8_1:34421704-34421723 Msa1190990:five_prime_UTR 55.0%
!! ACCAGTGGGCTGGAAGGAAC+AGG - chr8_1:34420435-34420454 Msa1190990:CDS 60.0%
ACCTGTTCCTTCCAGCCCAC+TGG + chr8_1:34420439-34420458 None:intergenic 60.0%
!! GTCGTTGGTGACGGTGAAGG+TGG + chr8_1:34421248-34421267 None:intergenic 60.0%
GGTGGTGAACCAGAGGGTGA+TGG + chr8_1:34421278-34421297 None:intergenic 60.0%
GGAATAGCCGCTGGAGATGG+TGG + chr8_1:34421296-34421315 None:intergenic 60.0%
GGAGGAATAGCCGCTGGAGA+TGG + chr8_1:34421299-34421318 None:intergenic 60.0%
CTTGCTGGAGGAATAGCCGC+TGG + chr8_1:34421305-34421324 None:intergenic 60.0%
TCCAGCAAGCTCCCCTGTTC+CGG - chr8_1:34421316-34421335 Msa1190990:intron 60.0%
TAGGTCCACCAGCCGGAACA+GGG + chr8_1:34421331-34421350 None:intergenic 60.0%
! TGTTCCGGCTGGTGGACCTA+CGG - chr8_1:34421331-34421350 Msa1190990:intron 60.0%
GATGCCATAGGTCCACCAGC+CGG + chr8_1:34421389-34421408 None:intergenic 60.0%
! GCTGGAGGTGTGCTCACTAC+TGG + chr8_1:34421428-34421447 None:intergenic 60.0%
GTAGTGAGCACACCTCCAGC+CGG - chr8_1:34421428-34421447 Msa1190990:CDS 60.0%
GCTTCATCTCCTTCTCCGGC+AGG - chr8_1:34421461-34421480 Msa1190990:CDS 60.0%
TCATCTCCTTCTCCGGCAGG+TGG - chr8_1:34421464-34421483 Msa1190990:CDS 60.0%
GATGGACCACCTGCTGGTGA+AGG + chr8_1:34421500-34421519 None:intergenic 60.0%
TTAGATCCTGGTGACCCCGC+TGG + chr8_1:34421626-34421645 None:intergenic 60.0%
AGCACCAACGGCAAGGGTTG+CGG + chr8_1:34421711-34421730 None:intergenic 60.0%
!! ACCAGTGGGCTGGAAGGAAC+AGG - chr8_1:34420435-34420454 Msa1190990:CDS 60.0%
ACCTGTTCCTTCCAGCCCAC+TGG + chr8_1:34420439-34420458 None:intergenic 60.0%
!! GTCGTTGGTGACGGTGAAGG+TGG + chr8_1:34421248-34421267 None:intergenic 60.0%
GGTGGTGAACCAGAGGGTGA+TGG + chr8_1:34421278-34421297 None:intergenic 60.0%
GGAATAGCCGCTGGAGATGG+TGG + chr8_1:34421296-34421315 None:intergenic 60.0%
GGAGGAATAGCCGCTGGAGA+TGG + chr8_1:34421299-34421318 None:intergenic 60.0%
CTTGCTGGAGGAATAGCCGC+TGG + chr8_1:34421305-34421324 None:intergenic 60.0%
TCCAGCAAGCTCCCCTGTTC+CGG - chr8_1:34421316-34421335 Msa1190990:intron 60.0%
TAGGTCCACCAGCCGGAACA+GGG + chr8_1:34421331-34421350 None:intergenic 60.0%
! TGTTCCGGCTGGTGGACCTA+CGG - chr8_1:34421331-34421350 Msa1190990:intron 60.0%
GATGCCATAGGTCCACCAGC+CGG + chr8_1:34421389-34421408 None:intergenic 60.0%
! GCTGGAGGTGTGCTCACTAC+TGG + chr8_1:34421428-34421447 None:intergenic 60.0%
GTAGTGAGCACACCTCCAGC+CGG - chr8_1:34421428-34421447 Msa1190990:CDS 60.0%
GCTTCATCTCCTTCTCCGGC+AGG - chr8_1:34421461-34421480 Msa1190990:CDS 60.0%
TCATCTCCTTCTCCGGCAGG+TGG - chr8_1:34421464-34421483 Msa1190990:CDS 60.0%
GATGGACCACCTGCTGGTGA+AGG + chr8_1:34421500-34421519 None:intergenic 60.0%
TTAGATCCTGGTGACCCCGC+TGG + chr8_1:34421626-34421645 None:intergenic 60.0%
AGCACCAACGGCAAGGGTTG+CGG + chr8_1:34421711-34421730 None:intergenic 60.0%
!! GGAACAGGGGAGCTTGCTGG+AGG + chr8_1:34421317-34421336 None:intergenic 65.0%
AGGTCCACCAGCCGGAACAG+GGG + chr8_1:34421330-34421349 None:intergenic 65.0%
GTAGGTCCACCAGCCGGAAC+AGG + chr8_1:34421332-34421351 None:intergenic 65.0%
GATGCCGTAGGTCCACCAGC+CGG + chr8_1:34421338-34421357 None:intergenic 65.0%
! GCCGGAGGTGTGCTCACTAC+TGG + chr8_1:34421371-34421390 None:intergenic 65.0%
GTAGTGAGCACACCTCCGGC+TGG - chr8_1:34421371-34421390 Msa1190990:CDS 65.0%
! ACCTCCGGCTGGTGGACCTA+TGG - chr8_1:34421382-34421401 Msa1190990:CDS 65.0%
ACCTCCAGCCGGTGGACCTA+TGG - chr8_1:34421439-34421458 Msa1190990:CDS 65.0%
GAAGCCATAGGTCCACCGGC+TGG + chr8_1:34421446-34421465 None:intergenic 65.0%
CCTGCTGGTGAAGGAGCTGG+TGG + chr8_1:34421491-34421510 None:intergenic 65.0%
CCACCAGCTCCTTCACCAGC+AGG - chr8_1:34421488-34421507 Msa1190990:CDS 65.0%
CCACCTGCTGGTGAAGGAGC+TGG + chr8_1:34421494-34421513 None:intergenic 65.0%
CCAGCTCCTTCACCAGCAGG+TGG - chr8_1:34421491-34421510 Msa1190990:exon 65.0%
GGGGTAGATGGACCACCTGC+TGG + chr8_1:34421506-34421525 None:intergenic 65.0%
GGTGGTCCATCTACCCCAGC+AGG - chr8_1:34421509-34421528 Msa1190990:five_prime_UTR 65.0%
GGTCCATCTACCCCAGCAGG+TGG - chr8_1:34421512-34421531 Msa1190990:five_prime_UTR 65.0%
GGACCACCTGCTGGGGTAGA+TGG + chr8_1:34421518-34421537 None:intergenic 65.0%
TACCCCAGCAGGTGGTCCTC+CGG - chr8_1:34421520-34421539 Msa1190990:five_prime_UTR 65.0%
TCCTGGTGTCCCTGATCCCC+CGG + chr8_1:34421588-34421607 None:intergenic 65.0%
GGATCAGGGACACCAGGACC+CGG - chr8_1:34421590-34421609 Msa1190990:five_prime_UTR 65.0%
GATCAGGGACACCAGGACCC+GGG - chr8_1:34421591-34421610 Msa1190990:five_prime_UTR 65.0%
ATCAGGGACACCAGGACCCG+GGG - chr8_1:34421592-34421611 Msa1190990:five_prime_UTR 65.0%
ACTGCACCACCGGGTAGCAG+TGG - chr8_1:34421650-34421669 Msa1190990:five_prime_UTR 65.0%
!! GGAACAGGGGAGCTTGCTGG+AGG + chr8_1:34421317-34421336 None:intergenic 65.0%
AGGTCCACCAGCCGGAACAG+GGG + chr8_1:34421330-34421349 None:intergenic 65.0%
GTAGGTCCACCAGCCGGAAC+AGG + chr8_1:34421332-34421351 None:intergenic 65.0%
GATGCCGTAGGTCCACCAGC+CGG + chr8_1:34421338-34421357 None:intergenic 65.0%
! GCCGGAGGTGTGCTCACTAC+TGG + chr8_1:34421371-34421390 None:intergenic 65.0%
GTAGTGAGCACACCTCCGGC+TGG - chr8_1:34421371-34421390 Msa1190990:CDS 65.0%
! ACCTCCGGCTGGTGGACCTA+TGG - chr8_1:34421382-34421401 Msa1190990:CDS 65.0%
ACCTCCAGCCGGTGGACCTA+TGG - chr8_1:34421439-34421458 Msa1190990:CDS 65.0%
GAAGCCATAGGTCCACCGGC+TGG + chr8_1:34421446-34421465 None:intergenic 65.0%
CCTGCTGGTGAAGGAGCTGG+TGG + chr8_1:34421491-34421510 None:intergenic 65.0%
CCACCAGCTCCTTCACCAGC+AGG - chr8_1:34421488-34421507 Msa1190990:CDS 65.0%
CCACCTGCTGGTGAAGGAGC+TGG + chr8_1:34421494-34421513 None:intergenic 65.0%
CCAGCTCCTTCACCAGCAGG+TGG - chr8_1:34421491-34421510 Msa1190990:exon 65.0%
GGGGTAGATGGACCACCTGC+TGG + chr8_1:34421506-34421525 None:intergenic 65.0%
GGTGGTCCATCTACCCCAGC+AGG - chr8_1:34421509-34421528 Msa1190990:five_prime_UTR 65.0%
GGTCCATCTACCCCAGCAGG+TGG - chr8_1:34421512-34421531 Msa1190990:five_prime_UTR 65.0%
GGACCACCTGCTGGGGTAGA+TGG + chr8_1:34421518-34421537 None:intergenic 65.0%
TACCCCAGCAGGTGGTCCTC+CGG - chr8_1:34421520-34421539 Msa1190990:five_prime_UTR 65.0%
TCCTGGTGTCCCTGATCCCC+CGG + chr8_1:34421588-34421607 None:intergenic 65.0%
GGATCAGGGACACCAGGACC+CGG - chr8_1:34421590-34421609 Msa1190990:five_prime_UTR 65.0%
GATCAGGGACACCAGGACCC+GGG - chr8_1:34421591-34421610 Msa1190990:five_prime_UTR 65.0%
ATCAGGGACACCAGGACCCG+GGG - chr8_1:34421592-34421611 Msa1190990:five_prime_UTR 65.0%
ACTGCACCACCGGGTAGCAG+TGG - chr8_1:34421650-34421669 Msa1190990:five_prime_UTR 65.0%
GCCGGAACAGGGGAGCTTGC+TGG + chr8_1:34421320-34421339 None:intergenic 70.0%
GCAAGCTCCCCTGTTCCGGC+TGG - chr8_1:34421320-34421339 Msa1190990:intron 70.0%
AGCTCCCCTGTTCCGGCTGG+TGG - chr8_1:34421323-34421342 Msa1190990:intron 70.0%
GTGAGCACACCTCCGGCTGG+TGG - chr8_1:34421374-34421393 Msa1190990:CDS 70.0%
GCCATAGGTCCACCAGCCGG+AGG + chr8_1:34421386-34421405 None:intergenic 70.0%
GTGAGCACACCTCCAGCCGG+TGG - chr8_1:34421431-34421450 Msa1190990:CDS 70.0%
! GCCATAGGTCCACCGGCTGG+AGG + chr8_1:34421443-34421462 None:intergenic 70.0%
GGTGGTCCACCTGCCGGAGA+AGG + chr8_1:34421473-34421492 None:intergenic 70.0%
GGAGCTGGTGGTCCACCTGC+CGG + chr8_1:34421479-34421498 None:intergenic 70.0%
AGCCGGAGGACCACCTGCTG+GGG + chr8_1:34421525-34421544 None:intergenic 70.0%
GAGCCGGAGGACCACCTGCT+GGG + chr8_1:34421526-34421545 None:intergenic 70.0%
!! ACTCCAGGGGCACCAGGACC+CGG - chr8_1:34421566-34421585 Msa1190990:five_prime_UTR 70.0%
CACCAGGACCCGGGGGATCA+GGG - chr8_1:34421576-34421595 Msa1190990:five_prime_UTR 70.0%
CCTGGTGTCCCTGATCCCCC+GGG + chr8_1:34421587-34421606 None:intergenic 70.0%
TCAGGGACACCAGGACCCGG+GGG - chr8_1:34421593-34421612 Msa1190990:five_prime_UTR 70.0%
TCCTGGTGACCCCGCTGGAG+CGG + chr8_1:34421621-34421640 None:intergenic 70.0%
GCCGGAACAGGGGAGCTTGC+TGG + chr8_1:34421320-34421339 None:intergenic 70.0%
GCAAGCTCCCCTGTTCCGGC+TGG - chr8_1:34421320-34421339 Msa1190990:intron 70.0%
AGCTCCCCTGTTCCGGCTGG+TGG - chr8_1:34421323-34421342 Msa1190990:intron 70.0%
GTGAGCACACCTCCGGCTGG+TGG - chr8_1:34421374-34421393 Msa1190990:CDS 70.0%
GCCATAGGTCCACCAGCCGG+AGG + chr8_1:34421386-34421405 None:intergenic 70.0%
GTGAGCACACCTCCAGCCGG+TGG - chr8_1:34421431-34421450 Msa1190990:CDS 70.0%
! GCCATAGGTCCACCGGCTGG+AGG + chr8_1:34421443-34421462 None:intergenic 70.0%
GGTGGTCCACCTGCCGGAGA+AGG + chr8_1:34421473-34421492 None:intergenic 70.0%
GGAGCTGGTGGTCCACCTGC+CGG + chr8_1:34421479-34421498 None:intergenic 70.0%
AGCCGGAGGACCACCTGCTG+GGG + chr8_1:34421525-34421544 None:intergenic 70.0%
GAGCCGGAGGACCACCTGCT+GGG + chr8_1:34421526-34421545 None:intergenic 70.0%
!! ACTCCAGGGGCACCAGGACC+CGG - chr8_1:34421566-34421585 Msa1190990:five_prime_UTR 70.0%
CACCAGGACCCGGGGGATCA+GGG - chr8_1:34421576-34421595 Msa1190990:five_prime_UTR 70.0%
CCTGGTGTCCCTGATCCCCC+GGG + chr8_1:34421587-34421606 None:intergenic 70.0%
TCAGGGACACCAGGACCCGG+GGG - chr8_1:34421593-34421612 Msa1190990:five_prime_UTR 70.0%
TCCTGGTGACCCCGCTGGAG+CGG + chr8_1:34421621-34421640 None:intergenic 70.0%
GGAGCCGGAGGACCACCTGC+TGG + chr8_1:34421527-34421546 None:intergenic 75.0%
GCAGGTGGTCCTCCGGCTCC+AGG - chr8_1:34421527-34421546 Msa1190990:five_prime_UTR 75.0%
GGTCCTCCGGCTCCAGGACC+CGG - chr8_1:34421533-34421552 Msa1190990:five_prime_UTR 75.0%
GTCCTCCGGCTCCAGGACCC+GGG - chr8_1:34421534-34421553 Msa1190990:five_prime_UTR 75.0%
TCCTCCGGCTCCAGGACCCG+GGG - chr8_1:34421535-34421554 Msa1190990:five_prime_UTR 75.0%
CCTGGAGTCGCTGCTCCCCC+GGG + chr8_1:34421554-34421573 None:intergenic 75.0%
CCCTGGAGTCGCTGCTCCCC+CGG + chr8_1:34421555-34421574 None:intergenic 75.0%
CCGGGGGAGCAGCGACTCCA+GGG - chr8_1:34421552-34421571 Msa1190990:five_prime_UTR 75.0%
CGGGGGAGCAGCGACTCCAG+GGG - chr8_1:34421553-34421572 Msa1190990:five_prime_UTR 75.0%
!! GCAGCGACTCCAGGGGCACC+AGG - chr8_1:34421560-34421579 Msa1190990:five_prime_UTR 75.0%
!! CTCCAGGGGCACCAGGACCC+GGG - chr8_1:34421567-34421586 Msa1190990:five_prime_UTR 75.0%
!! TCCAGGGGCACCAGGACCCG+GGG - chr8_1:34421568-34421587 Msa1190990:five_prime_UTR 75.0%
GCACCAGGACCCGGGGGATC+AGG - chr8_1:34421575-34421594 Msa1190990:five_prime_UTR 75.0%
GTCCCTGATCCCCCGGGTCC+TGG + chr8_1:34421581-34421600 None:intergenic 75.0%
CCCGGGGGATCAGGGACACC+AGG - chr8_1:34421584-34421603 Msa1190990:five_prime_UTR 75.0%
GGAGCCGGAGGACCACCTGC+TGG + chr8_1:34421527-34421546 None:intergenic 75.0%
GCAGGTGGTCCTCCGGCTCC+AGG - chr8_1:34421527-34421546 Msa1190990:five_prime_UTR 75.0%
GGTCCTCCGGCTCCAGGACC+CGG - chr8_1:34421533-34421552 Msa1190990:five_prime_UTR 75.0%
GTCCTCCGGCTCCAGGACCC+GGG - chr8_1:34421534-34421553 Msa1190990:five_prime_UTR 75.0%
TCCTCCGGCTCCAGGACCCG+GGG - chr8_1:34421535-34421554 Msa1190990:five_prime_UTR 75.0%
CCTGGAGTCGCTGCTCCCCC+GGG + chr8_1:34421554-34421573 None:intergenic 75.0%
CCCTGGAGTCGCTGCTCCCC+CGG + chr8_1:34421555-34421574 None:intergenic 75.0%
CCGGGGGAGCAGCGACTCCA+GGG - chr8_1:34421552-34421571 Msa1190990:five_prime_UTR 75.0%
CGGGGGAGCAGCGACTCCAG+GGG - chr8_1:34421553-34421572 Msa1190990:five_prime_UTR 75.0%
!! GCAGCGACTCCAGGGGCACC+AGG - chr8_1:34421560-34421579 Msa1190990:five_prime_UTR 75.0%
!! CTCCAGGGGCACCAGGACCC+GGG - chr8_1:34421567-34421586 Msa1190990:five_prime_UTR 75.0%
!! TCCAGGGGCACCAGGACCCG+GGG - chr8_1:34421568-34421587 Msa1190990:five_prime_UTR 75.0%
GCACCAGGACCCGGGGGATC+AGG - chr8_1:34421575-34421594 Msa1190990:five_prime_UTR 75.0%
GTCCCTGATCCCCCGGGTCC+TGG + chr8_1:34421581-34421600 None:intergenic 75.0%
CCCGGGGGATCAGGGACACC+AGG - chr8_1:34421584-34421603 Msa1190990:five_prime_UTR 75.0%
! CCTCCGGCTCCAGGACCCGG+GGG - chr8_1:34421536-34421555 Msa1190990:five_prime_UTR 80.0%
! GCTCCCCCGGGTCCTGGAGC+CGG + chr8_1:34421542-34421561 None:intergenic 80.0%
! GTCGCTGCTCCCCCGGGTCC+TGG + chr8_1:34421548-34421567 None:intergenic 80.0%
! CCCGGGGGAGCAGCGACTCC+AGG - chr8_1:34421551-34421570 Msa1190990:five_prime_UTR 80.0%
!!! CCAGGGGCACCAGGACCCGG+GGG - chr8_1:34421569-34421588 Msa1190990:five_prime_UTR 80.0%
! ACCCGGGGGAGCCGCTCCAG+CGG - chr8_1:34421607-34421626 Msa1190990:five_prime_UTR 80.0%
! GCCGCTCCAGCGGGGTCACC+AGG - chr8_1:34421617-34421636 Msa1190990:five_prime_UTR 80.0%
! CCTCCGGCTCCAGGACCCGG+GGG - chr8_1:34421536-34421555 Msa1190990:five_prime_UTR 80.0%
! GCTCCCCCGGGTCCTGGAGC+CGG + chr8_1:34421542-34421561 None:intergenic 80.0%
! GTCGCTGCTCCCCCGGGTCC+TGG + chr8_1:34421548-34421567 None:intergenic 80.0%
! CCCGGGGGAGCAGCGACTCC+AGG - chr8_1:34421551-34421570 Msa1190990:five_prime_UTR 80.0%
!!! CCAGGGGCACCAGGACCCGG+GGG - chr8_1:34421569-34421588 Msa1190990:five_prime_UTR 80.0%
! ACCCGGGGGAGCCGCTCCAG+CGG - chr8_1:34421607-34421626 Msa1190990:five_prime_UTR 80.0%
! GCCGCTCCAGCGGGGTCACC+AGG - chr8_1:34421617-34421636 Msa1190990:five_prime_UTR 80.0%
! CCCCCGGGTCCTGGAGCCGG+AGG + chr8_1:34421539-34421558 None:intergenic 85.0%
! CCCCCGGGTCCTGGTGCCCC+TGG + chr8_1:34421572-34421591 None:intergenic 85.0%
! GGAGCGGCTCCCCCGGGTCC+TGG + chr8_1:34421605-34421624 None:intergenic 85.0%
! CCCGCTGGAGCGGCTCCCCC+GGG + chr8_1:34421611-34421630 None:intergenic 85.0%
! CCCGGGGGAGCCGCTCCAGC+GGG - chr8_1:34421608-34421627 Msa1190990:five_prime_UTR 85.0%
! CCCCGCTGGAGCGGCTCCCC+CGG + chr8_1:34421612-34421631 None:intergenic 85.0%
! CCGGGGGAGCCGCTCCAGCG+GGG - chr8_1:34421609-34421628 Msa1190990:five_prime_UTR 85.0%
! CCCCCGGGTCCTGGAGCCGG+AGG + chr8_1:34421539-34421558 None:intergenic 85.0%
! CCCCCGGGTCCTGGTGCCCC+TGG + chr8_1:34421572-34421591 None:intergenic 85.0%
! GGAGCGGCTCCCCCGGGTCC+TGG + chr8_1:34421605-34421624 None:intergenic 85.0%
! CCCGCTGGAGCGGCTCCCCC+GGG + chr8_1:34421611-34421630 None:intergenic 85.0%
! CCCGGGGGAGCCGCTCCAGC+GGG - chr8_1:34421608-34421627 Msa1190990:five_prime_UTR 85.0%
! CCCCGCTGGAGCGGCTCCCC+CGG + chr8_1:34421612-34421631 None:intergenic 85.0%
! CCGGGGGAGCCGCTCCAGCG+GGG - chr8_1:34421609-34421628 Msa1190990:five_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 34420074 34421748 34420074 ID=Msa1190990;Name=Msa1190990
chr8_1 mRNA 34420074 34421748 34420074 ID=Msa1190990-mRNA-1;Parent=Msa1190990;Name=Msa1190990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=240|1|0.5|1|1|1|2|0|307
chr8_1 exon 34420074 34420831 34420074 ID=Msa1190990-mRNA-1:exon:11544;Parent=Msa1190990-mRNA-1
chr8_1 exon 34421343 34421748 34421343 ID=Msa1190990-mRNA-1:exon:11543;Parent=Msa1190990-mRNA-1
chr8_1 five_prime_UTR 34421509 34421748 34421509 ID=Msa1190990-mRNA-1:five_prime_utr;Parent=Msa1190990-mRNA-1
chr8_1 CDS 34421343 34421508 34421343 ID=Msa1190990-mRNA-1:cds;Parent=Msa1190990-mRNA-1
chr8_1 CDS 34420074 34420831 34420074 ID=Msa1190990-mRNA-1:cds;Parent=Msa1190990-mRNA-1
Gene Sequence

>Msa1190990

ATGGAGTTTAAGATACCTCTCTTCTTTGTTCTCTTCACTCTTGTTGTCTCAACTTCTCAAGCCTTCAAGTATTTCGTTGGTGGAAAGGATGGATGGACTCTAAACCCTTCTGAGAATTACAACCAGTGGGCTGGAAGGAACAGGTTCCAAATCAGTGACACTATAGTTTTCAAGTACAAGAAGGGTTCAGACTCGGTGTTGGAAGTGAAGAAAGAAGATTATGAAAAGTGCAACAAAACAAACCCAATCAAGAAATTCGAAGATGGTGATACAGAGTTCACTTTGGACAGAGCAGGGCCATTCTATTTCATCAGTGGAAAAGATCAAAACTGTGAAAAGGGTCAGAAATTAACCCTTGTTGTTATAACTCCACGAACACCACCAAAATCATCTCCTTCACCAAGTGGTGGTGGCTTATCACCACCTTCACCGTCACCAACGACAACCACTCCATCACCCTCTGGTTCACCACCATCTCCAGCGGCTATTCCTCCAGCAAGCTCCCCTGTTCCGGCTGGTGGACCTACGGCATCATCTCCATCTCCAGTAGTGAGCACACCTCCGGCTGGTGGACCTATGGCATCATCTCCATCTCCATCTCCAGTAGTGAGCACACCTCCAGCCGGTGGACCTATGGCTTCATCTCCTTCTCCGGCAGGTGGACCACCAGCTCCTTCACCAGCAGGTGGTCCATCTACCCCAGCAGGTGGTCCTCCGGCTCCAGGACCCGGGGGAGCAGCGACTCCAGGGGCACCAGGACCCGGGGGATCAGGGACACCAGGACCCGGGGGAGCCGCTCCAGCGGGGTCACCAGGATCTAATTCAACTGCACCACCGGGTAGCAGTGGTTCATTTGTAGCTCCTTCGAGCTTTCTGGTGTATTCCGCAACCCTTGCCGTTGGTGCTCTGTTTTTGAGTTACTGA
Protein sequence

>Msa1190990

MEFKIPLFFVLFTLVVSTSQAFKYFVGGKDGWTLNPSENYNQWAGRNRFQISDTIVFKYKKGSDSVLEVKKEDYEKCNKTNPIKKFEDGDTEFTLDRAGPFYFISGKDQNCEKGQKLTLVVITPRTPPKSSPSPSGGGLSPPSPSPTTTTPSPSGSPPSPAAIPPASSPVPAGGPTASSPSPVVSTPPAGGPMASSPSPSPVVSTPPAGGPMASSPSPAGGPPAPSPAGGPSTPAGGPPAPGPGGAATPGAPGPGGSGTPGPGGAAPAGSPGSNSTAPPGSSGSFVAPSSFLVYSATLAVGALFLSY*