Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545860 | XP_003606163.2 | 97.967 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545860 | sp|Q93ZB9|FACR3_ARATH | 59.053 | 486 | 198 | 1 | 6 | 491 | 9 | 493 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545860 | G7JJM0 | 97.967 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1001 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0130240 | Msa0545860 | 0.803192 | 3.919840e-49 | -8.615850e-47 |
| Msa0249580 | Msa0545860 | 0.802235 | 6.175620e-49 | -8.615850e-47 |
| Msa0295080 | Msa0545860 | 0.805948 | 1.043192e-49 | -8.615850e-47 |
| Msa0307850 | Msa0545860 | 0.816186 | 6.295576e-52 | -8.615850e-47 |
| Msa0545860 | Msa0601530 | 0.888909 | 3.883238e-73 | -8.615850e-47 |
| Msa0545860 | Msa0644030 | 0.802817 | 4.686355e-49 | -8.615850e-47 |
| Msa0545860 | Msa0644800 | 0.941545 | 3.450336e-101 | -8.615850e-47 |
| Msa0545860 | Msa0680700 | 0.852872 | 3.470096e-61 | -8.615850e-47 |
| Msa0545860 | Msa1123350 | 0.801779 | 7.663126e-49 | -8.615850e-47 |
| Msa0545860 | Msa1251160 | 0.812225 | 4.718785e-51 | -8.615850e-47 |
| Msa0545860 | Msa1443300 | 0.806958 | 6.386554e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545860 | MtrunA17_Chr4g0026701 | 97.967 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1001 |
| Msa0545860 | MtrunA17_Chr2g0321181 | 72.449 | 490 | 135 | 0 | 3 | 492 | 2 | 491 | 0.0 | 770 |
| Msa0545860 | MtrunA17_Chr2g0321201 | 69.388 | 490 | 149 | 1 | 3 | 492 | 4 | 492 | 0.0 | 734 |
| Msa0545860 | MtrunA17_Chr4g0026691 | 68.776 | 490 | 153 | 0 | 3 | 492 | 2 | 491 | 0.0 | 732 |
| Msa0545860 | MtrunA17_Chr4g0026711 | 48.374 | 492 | 250 | 2 | 5 | 492 | 4 | 495 | 1.44e-172 | 495 |
| Msa0545860 | MtrunA17_Chr4g0026771 | 47.131 | 488 | 252 | 4 | 10 | 492 | 6 | 492 | 1.92e-162 | 469 |
| Msa0545860 | MtrunA17_Chr6g0465391 | 46.856 | 493 | 225 | 5 | 3 | 492 | 2 | 460 | 2.21e-156 | 452 |
| Msa0545860 | MtrunA17_Chr1g0176054 | 39.479 | 499 | 291 | 6 | 1 | 492 | 114 | 608 | 6.90e-124 | 375 |
| Msa0545860 | MtrunA17_Chr5g0419501 | 39.850 | 399 | 183 | 4 | 4 | 399 | 3 | 347 | 1.00e-96 | 296 |
| Msa0545860 | MtrunA17_Chr4g0026891 | 49.776 | 223 | 108 | 2 | 10 | 228 | 6 | 228 | 1.28e-69 | 224 |
| Msa0545860 | MtrunA17_Chr5g0431251 | 49.231 | 130 | 66 | 0 | 181 | 310 | 1 | 130 | 2.76e-42 | 147 |
| Msa0545860 | MtrunA17_Chr4g0026911 | 42.077 | 183 | 102 | 4 | 310 | 489 | 3 | 184 | 2.91e-42 | 149 |
| Msa0545860 | MtrunA17_Chr5g0431241 | 54.762 | 126 | 55 | 1 | 5 | 130 | 4 | 127 | 3.76e-41 | 144 |
| Msa0545860 | MtrunA17_Chr5g0431281 | 40.323 | 186 | 105 | 3 | 310 | 492 | 28 | 210 | 8.25e-40 | 143 |
| Msa0545860 | MtrunA17_Chr6g0465381 | 45.578 | 147 | 78 | 1 | 244 | 388 | 1 | 147 | 5.21e-32 | 120 |
| Msa0545860 | MtrunA17_Chr5g0419491 | 46.809 | 94 | 50 | 0 | 399 | 492 | 7 | 100 | 1.05e-23 | 95.5 |
| Msa0545860 | MtrunA17_Chr4g0026901 | 66.667 | 57 | 19 | 0 | 228 | 284 | 16 | 72 | 9.26e-23 | 92.0 |
| Msa0545860 | MtrunA17_Chr5g0431271 | 56.716 | 67 | 29 | 0 | 244 | 310 | 1 | 67 | 1.40e-21 | 90.5 |
| Msa0545860 | MtrunA17_Chr5g0431261 | 36.667 | 90 | 57 | 0 | 310 | 399 | 3 | 92 | 7.82e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545860 | AT4G33790.1 | 59.053 | 486 | 198 | 1 | 6 | 491 | 9 | 493 | 0.0 | 624 |
| Msa0545860 | AT3G44540.1 | 54.527 | 486 | 219 | 2 | 9 | 492 | 7 | 492 | 0.0 | 558 |
| Msa0545860 | AT5G22500.1 | 52.469 | 486 | 227 | 3 | 9 | 492 | 7 | 490 | 0.0 | 548 |
| Msa0545860 | AT3G44550.1 | 52.653 | 490 | 225 | 4 | 9 | 492 | 7 | 495 | 0.0 | 528 |
| Msa0545860 | AT3G44560.1 | 51.521 | 493 | 232 | 4 | 6 | 492 | 4 | 495 | 1.12e-176 | 506 |
| Msa0545860 | AT4G33790.2 | 58.793 | 381 | 156 | 1 | 111 | 491 | 1 | 380 | 1.03e-174 | 496 |
| Msa0545860 | AT3G44560.3 | 53.061 | 441 | 203 | 3 | 6 | 443 | 4 | 443 | 6.20e-161 | 464 |
| Msa0545860 | AT5G22500.2 | 54.847 | 392 | 174 | 2 | 9 | 399 | 7 | 396 | 1.11e-160 | 461 |
| Msa0545860 | AT3G44560.2 | 54.386 | 399 | 178 | 3 | 6 | 401 | 4 | 401 | 1.80e-149 | 433 |
| Msa0545860 | AT3G44550.2 | 51.421 | 387 | 182 | 3 | 111 | 492 | 1 | 386 | 6.34e-141 | 410 |
| Msa0545860 | AT3G44540.2 | 59.016 | 305 | 124 | 1 | 9 | 312 | 7 | 311 | 6.51e-131 | 382 |
| Msa0545860 | AT3G44540.3 | 59.016 | 305 | 124 | 1 | 9 | 312 | 7 | 311 | 6.51e-131 | 382 |
| Msa0545860 | AT5G22420.4 | 50.959 | 365 | 174 | 4 | 116 | 479 | 6 | 366 | 4.43e-130 | 382 |
| Msa0545860 | AT3G11980.1 | 40.562 | 498 | 276 | 8 | 7 | 492 | 124 | 613 | 3.42e-126 | 381 |
| Msa0545860 | AT5G22420.1 | 48.257 | 373 | 188 | 4 | 108 | 479 | 34 | 402 | 5.67e-123 | 365 |
| Msa0545860 | AT5G22420.1 | 64.000 | 50 | 18 | 0 | 9 | 58 | 7 | 56 | 1.23e-13 | 73.2 |
| Msa0545860 | AT5G22420.3 | 50.284 | 352 | 170 | 4 | 129 | 479 | 3 | 350 | 9.13e-123 | 363 |
| Msa0545860 | AT5G22420.6 | 50.284 | 352 | 170 | 4 | 129 | 479 | 3 | 350 | 9.13e-123 | 363 |
| Msa0545860 | AT3G56700.2 | 36.853 | 483 | 284 | 7 | 7 | 488 | 77 | 539 | 4.03e-104 | 322 |
| Msa0545860 | AT5G22420.5 | 48.734 | 316 | 157 | 4 | 165 | 479 | 4 | 315 | 1.01e-103 | 313 |
| Msa0545860 | AT5G22420.2 | 48.000 | 300 | 151 | 4 | 181 | 479 | 1 | 296 | 2.58e-96 | 293 |
| Msa0545860 | AT5G22420.7 | 48.000 | 300 | 151 | 4 | 181 | 479 | 1 | 296 | 2.58e-96 | 293 |
| Msa0545860 | AT3G56700.1 | 35.197 | 483 | 271 | 8 | 7 | 488 | 77 | 518 | 9.00e-93 | 292 |
Find 98 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTTACTTGCTTCCTTTAA+AGG | 0.085086 | 4_1:+36709935 | Msa0545860:CDS |
| AGAAATTGAATAACCTTTAA+AGG | 0.182202 | 4_1:-36709948 | None:intergenic |
| CAACTTGGTGTTTCACTAAA+TGG | 0.185971 | 4_1:+36708117 | Msa0545860:CDS |
| TGCGGTTGGTTGAACTTTAC+AGG | 0.263042 | 4_1:+36710540 | Msa0545860:CDS |
| TTTCTCTCTATATATATATT+TGG | 0.267188 | 4_1:+36703886 | None:intergenic |
| ATGCTTCCTTGCAGACTTAG+AGG | 0.301520 | 4_1:+36708743 | Msa0545860:CDS |
| TTCATGAACATTCATATTCC+TGG | 0.304377 | 4_1:+36710861 | Msa0545860:CDS |
| CCAAGAAAATTTCAATTTGA+AGG | 0.310827 | 4_1:+36706874 | Msa0545860:CDS |
| GACAGTTTAATTGTTGCATA+TGG | 0.320149 | 4_1:+36708705 | Msa0545860:CDS |
| TTCCATTCCCAAGTCCTTCA+TGG | 0.320784 | 4_1:-36708238 | None:intergenic |
| GCTAGAGAGATTAATAATAT+TGG | 0.323863 | 4_1:+36710986 | Msa0545860:three_prime_UTR |
| TGCAACAATTAAACTGTCTA+TGG | 0.329367 | 4_1:-36708700 | None:intergenic |
| AACGAATATACATGTATCTT+TGG | 0.340392 | 4_1:-36709917 | None:intergenic |
| CCTTGAGCATAAGAATGTTT+TGG | 0.340479 | 4_1:+36704043 | Msa0545860:CDS |
| GGTAACTTTGCCAACTTTGA+TGG | 0.345674 | 4_1:-36709871 | None:intergenic |
| GCATTGGGTTTAAATACATT+TGG | 0.366725 | 4_1:+36707202 | Msa0545860:CDS |
| AGATAAAGTTTCTTCACATT+TGG | 0.367398 | 4_1:-36704248 | None:intergenic |
| CAGAATATAGTTTCACTTGA+AGG | 0.368930 | 4_1:-36710898 | None:intergenic |
| TAAGTACTGGTAATGATTGT+AGG | 0.376329 | 4_1:-36708517 | None:intergenic |
| CAAAGAACCTTTCCCTGGTT+GGG | 0.394468 | 4_1:+36708540 | Msa0545860:CDS |
| CTTCCTTCCTTGTCAAAACA+TGG | 0.404754 | 4_1:-36709846 | None:intergenic |
| GTATAACTCTTGAAGTAGAT+TGG | 0.417054 | 4_1:-36706900 | None:intergenic |
| AGTTGGCAAAGTTACCGTAT+TGG | 0.425068 | 4_1:+36709878 | Msa0545860:CDS |
| TAAAATTGCCATGAAGGACT+TGG | 0.427959 | 4_1:+36708230 | Msa0545860:CDS |
| GTGCTTGTCCACGTATCAAC+AGG | 0.430498 | 4_1:+36707271 | Msa0545860:CDS |
| GAAGCAGATCCCTGCTGATA+TGG | 0.433499 | 4_1:+36709680 | Msa0545860:intron |
| TTAATTGTTGCATATGGTAA+AGG | 0.436186 | 4_1:+36708711 | Msa0545860:CDS |
| CAACCAACCGCATCACAGTA+TGG | 0.442539 | 4_1:-36710529 | None:intergenic |
| GAAAGGTTCTTTGTAAGTAC+TGG | 0.450620 | 4_1:-36708530 | None:intergenic |
| AAGGAATATTTGACAATGCC+AGG | 0.451920 | 4_1:-36710879 | None:intergenic |
| ATCACGTGGGTTCATCTGTT+CGG | 0.460795 | 4_1:+36709766 | Msa0545860:CDS |
| CCTTTCCCTGGTTGGGTCGA+AGG | 0.461087 | 4_1:+36708547 | Msa0545860:CDS |
| AGGCCCTATGTGTTCTTCAA+TGG | 0.461502 | 4_1:+36710560 | Msa0545860:CDS |
| TTTGTAAAGACATATGTGTT+TGG | 0.467992 | 4_1:-36708433 | None:intergenic |
| CTTACTCCTTCGACCCAACC+AGG | 0.485945 | 4_1:-36708553 | None:intergenic |
| CTGGTTGGGTCGAAGGAGTA+AGG | 0.490574 | 4_1:+36708554 | Msa0545860:CDS |
| AGTGAAACACCAAGTTGGTA+TGG | 0.494139 | 4_1:-36708111 | None:intergenic |
| GCATTCACCACCATATCAGC+AGG | 0.497234 | 4_1:-36709690 | None:intergenic |
| ACAAAGAACCTTTCCCTGGT+TGG | 0.498389 | 4_1:+36708539 | Msa0545860:CDS |
| GGATACTAAAATTGCCATGA+AGG | 0.514059 | 4_1:+36708224 | Msa0545860:CDS |
| TATGTCTTTACAAAGGCAAT+GGG | 0.529172 | 4_1:+36708442 | Msa0545860:CDS |
| ACTTACAAAGAACCTTTCCC+TGG | 0.531850 | 4_1:+36708535 | Msa0545860:CDS |
| TGAGGAAAAGAGAGTAGTTG+AGG | 0.532920 | 4_1:+36708161 | Msa0545860:CDS |
| GGACTTGTTCAAATTGCTGA+AGG | 0.533109 | 4_1:+36706784 | Msa0545860:CDS |
| ACAAGAGGGAGCTACTGAAA+AGG | 0.533743 | 4_1:+36708203 | Msa0545860:CDS |
| GAAGGAAGAGCCATCAAAGT+TGG | 0.538912 | 4_1:+36709861 | Msa0545860:CDS |
| AATGCTAGTTGGAACTATGA+AGG | 0.538953 | 4_1:+36708468 | Msa0545860:CDS |
| TGCCATGAAGGACTTGGGAA+TGG | 0.539047 | 4_1:+36708236 | Msa0545860:CDS |
| ATACTGCCAAATTGATCCAT+TGG | 0.540433 | 4_1:-36704011 | None:intergenic |
| TGCAGATATGATGTAGCATT+GGG | 0.544440 | 4_1:+36707187 | Msa0545860:intron |
| AAAGAGAGTTACTCTTTGCA+AGG | 0.545203 | 4_1:-36704085 | None:intergenic |
| TCAGAGCAAAGTTATATGGA+TGG | 0.546766 | 4_1:+36708410 | Msa0545860:intron |
| GCAATGGGAGAAATGCTAGT+TGG | 0.548595 | 4_1:+36708457 | Msa0545860:CDS |
| CCAAAACATTCTTATGCTCA+AGG | 0.551300 | 4_1:-36704043 | None:intergenic |
| AGAGAGATTAATAATATTGG+TGG | 0.552498 | 4_1:+36710989 | Msa0545860:three_prime_UTR |
| AAGACAAAGTGGAGTAGAGA+TGG | 0.553343 | 4_1:+36710794 | Msa0545860:CDS |
| AAAATTGCCATGAAGGACTT+GGG | 0.556255 | 4_1:+36708231 | Msa0545860:CDS |
| ATGCAGATATGATGTAGCAT+TGG | 0.559269 | 4_1:+36707186 | Msa0545860:intron |
| TTTAAACTTCTTATTACGTG+TGG | 0.563068 | 4_1:+36711031 | Msa0545860:three_prime_UTR |
| ATTGAACATGCTTCAACAAG+AGG | 0.567383 | 4_1:+36708188 | Msa0545860:CDS |
| CTCATTGTGCAGTCTTCTAG+TGG | 0.568499 | 4_1:-36704300 | None:intergenic |
| GAATGCAATGCTAGTGGCCA+TGG | 0.569856 | 4_1:+36709707 | Msa0545860:CDS |
| CTAAGACTCTCATATCTCAC+AGG | 0.569873 | 4_1:-36709792 | None:intergenic |
| CAAATAGCAGCAAGACAAAG+TGG | 0.573597 | 4_1:+36710783 | Msa0545860:CDS |
| CAACAACTAACTTTGATGAA+AGG | 0.576712 | 4_1:+36706954 | Msa0545860:CDS |
| ATATGTCTTTACAAAGGCAA+TGG | 0.586877 | 4_1:+36708441 | Msa0545860:CDS |
| ACGCCATTGAAGAACACATA+GGG | 0.595025 | 4_1:-36710563 | None:intergenic |
| GAGAGGAGGACTGATAGTAG+AGG | 0.600345 | 4_1:+36708086 | Msa0545860:CDS |
| CATTTAGTGAAACACCAAGT+TGG | 0.601093 | 4_1:-36708116 | None:intergenic |
| CCTTCGACCCAACCAGGGAA+AGG | 0.605631 | 4_1:-36708547 | None:intergenic |
| TTAAATGTAGCATACGTATG+TGG | 0.610970 | 4_1:+36708060 | Msa0545860:intron |
| AAACTGCCTCTAAGTCTGCA+AGG | 0.617704 | 4_1:-36708749 | None:intergenic |
| AAATTGCTGAAGGAAAATCA+TGG | 0.619305 | 4_1:+36706794 | Msa0545860:CDS |
| GTTTCACTAAATGGAGTGCA+AGG | 0.619534 | 4_1:+36708126 | Msa0545860:CDS |
| AATACAAACCTGTTGATACG+TGG | 0.632502 | 4_1:-36707279 | None:intergenic |
| TTGAACATGCTTCAACAAGA+GGG | 0.635496 | 4_1:+36708189 | Msa0545860:CDS |
| TTACTCCTTCGACCCAACCA+GGG | 0.637146 | 4_1:-36708552 | None:intergenic |
| TGAAGGACTTGGGAATGGAA+AGG | 0.637500 | 4_1:+36708241 | Msa0545860:CDS |
| GCATACGTATGTGGAGAGAG+AGG | 0.637651 | 4_1:+36708069 | Msa0545860:intron |
| CACGCCATTGAAGAACACAT+AGG | 0.641905 | 4_1:-36710564 | None:intergenic |
| TGATGATAGCATATATCACG+TGG | 0.642564 | 4_1:+36709752 | Msa0545860:CDS |
| GGTCCATACTGTGATGCGGT+TGG | 0.646323 | 4_1:+36710526 | Msa0545860:CDS |
| TGTAGGACGCACAATAACAA+TGG | 0.646982 | 4_1:-36708500 | None:intergenic |
| AATATGTACTTTGAAAATAG+CGG | 0.651662 | 4_1:-36710487 | None:intergenic |
| CACTAGAAGACTGCACAATG+AGG | 0.653012 | 4_1:+36704301 | Msa0545860:CDS |
| GCAAGGACTAGACATTGATG+AGG | 0.656577 | 4_1:+36708143 | Msa0545860:CDS |
| TTGATTTGCATGACTCACCA+TGG | 0.657844 | 4_1:-36709724 | None:intergenic |
| GTAGAGGATCCATACCAACT+TGG | 0.659399 | 4_1:+36708102 | Msa0545860:CDS |
| TACGTATGTGGAGAGAGAGG+AGG | 0.668461 | 4_1:+36708072 | Msa0545860:CDS |
| AAACACATATGTCTTTACAA+AGG | 0.671076 | 4_1:+36708435 | Msa0545860:CDS |
| GCAGATCCCTGCTGATATGG+TGG | 0.671477 | 4_1:+36709683 | Msa0545860:intron |
| AAAAGTGACTCTAGTGCCTG+GGG | 0.681356 | 4_1:+36706844 | Msa0545860:CDS |
| TGATATATGCTATCATCACA+AGG | 0.681859 | 4_1:-36709747 | None:intergenic |
| CATTCACCACCATATCAGCA+GGG | 0.685104 | 4_1:-36709689 | None:intergenic |
| GGAAGGTCCATACTGTGATG+CGG | 0.690975 | 4_1:+36710522 | Msa0545860:CDS |
| GGTGGTGAATGCAATGCTAG+TGG | 0.712141 | 4_1:+36709701 | Msa0545860:CDS |
| GATGATAGCATATATCACGT+GGG | 0.729775 | 4_1:+36709753 | Msa0545860:CDS |
| ATACGTGGACAAGCACCCTG+AGG | 0.756197 | 4_1:-36707264 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATATATATATATTT+AGG | - | chr4_1:36706550-36706569 | None:intergenic | 0.0% |
| !! | TATATATATATATATAATAT+TGG | + | chr4_1:36707406-36707425 | Msa0545860:intron | 0.0% |
| !!! | TATACACAAATAATTTTTTT+TGG | - | chr4_1:36704383-36704402 | None:intergenic | 10.0% |
| !! | AAAAAAATTATTTGTGTATA+AGG | + | chr4_1:36704383-36704402 | Msa0545860:intron | 10.0% |
| !!! | TAGATTTTTATGTAATTTTA+CGG | - | chr4_1:36704708-36704727 | None:intergenic | 10.0% |
| !!! | TTTTAGTTAAATATGTTAAT+TGG | - | chr4_1:36705240-36705259 | None:intergenic | 10.0% |
| !! | TGTATATTAATAGAAAAATA+CGG | - | chr4_1:36705385-36705404 | None:intergenic | 10.0% |
| !! | TTCAAAAAAAAATATACTTT+AGG | - | chr4_1:36706583-36706602 | None:intergenic | 10.0% |
| !!! | TAAAGTATATTTTTTTTTGA+AGG | + | chr4_1:36706582-36706601 | Msa0545860:intron | 10.0% |
| !! | TAAAAAATTTCTAAATTTGA+TGG | - | chr4_1:36707649-36707668 | None:intergenic | 10.0% |
| !! | ATTAACTACAATAAAAAATT+TGG | - | chr4_1:36708591-36708610 | None:intergenic | 10.0% |
| !!! | TTATTTTAAAAAAAGTAACA+TGG | - | chr4_1:36709060-36709079 | None:intergenic | 10.0% |
| !!! | ATTTAGTTATGTTATTTTTT+TGG | - | chr4_1:36709603-36709622 | None:intergenic | 10.0% |
| !! | CATAACTAAATAATATAATT+AGG | + | chr4_1:36709612-36709631 | Msa0545860:intron | 10.0% |
| !! | GTTTATTAAATTTGTGTATA+AGG | + | chr4_1:36704351-36704370 | Msa0545860:intron | 15.0% |
| !! | AAATCACAAAAATATCTTAT+CGG | + | chr4_1:36704867-36704886 | Msa0545860:intron | 15.0% |
| !!! | AACTTTTATGATGTAAATTT+AGG | + | chr4_1:36705173-36705192 | Msa0545860:intron | 15.0% |
| !!! | AAAATTGCATATTTTCAAAT+GGG | - | chr4_1:36705345-36705364 | None:intergenic | 15.0% |
| !! | AATTCATGAAATTAATTATG+AGG | + | chr4_1:36706033-36706052 | Msa0545860:intron | 15.0% |
| !! | TGAATGAAAATTATAATTAG+TGG | - | chr4_1:36706109-36706128 | None:intergenic | 15.0% |
| !! | AAGTTATCTTAAATATAAGA+CGG | + | chr4_1:36706171-36706190 | Msa0545860:intron | 15.0% |
| !!! | ATTTTCCAACTTTTTTTTTT+TGG | - | chr4_1:36706352-36706371 | None:intergenic | 15.0% |
| !!! | TAACATTATTTCTTTTGAAT+GGG | - | chr4_1:36707054-36707073 | None:intergenic | 15.0% |
| !!! | TTAACATTATTTCTTTTGAA+TGG | - | chr4_1:36707055-36707074 | None:intergenic | 15.0% |
| !!! | GTTATATTAGTCTTTTTTTA+AGG | + | chr4_1:36707326-36707345 | Msa0545860:intron | 15.0% |
| !!! | AATTTGATGGATATAAATAT+AGG | - | chr4_1:36707636-36707655 | None:intergenic | 15.0% |
| !!! | TATTTTATTTTATTGGTTCT+AGG | - | chr4_1:36707817-36707836 | None:intergenic | 15.0% |
| !!! | CCTATCATATTTTATTTTAT+TGG | - | chr4_1:36707824-36707843 | None:intergenic | 15.0% |
| !! | CCAATAAAATAAAATATGAT+AGG | + | chr4_1:36707821-36707840 | Msa0545860:intron | 15.0% |
| !!! | TTTGTTGTTAATTTGTTTAT+TGG | - | chr4_1:36708356-36708375 | None:intergenic | 15.0% |
| !!! | TTTAGTTTATCTTCTTTAAA+AGG | + | chr4_1:36708791-36708810 | Msa0545860:intron | 15.0% |
| !! | AAATAATTATGTGTTAACTT+TGG | - | chr4_1:36710036-36710055 | None:intergenic | 15.0% |
| !!! | GTTTAATTTCAATACATTAT+CGG | - | chr4_1:36710091-36710110 | None:intergenic | 15.0% |
| !!! | AGAAAATTAAACTTGTTTTT+AGG | + | chr4_1:36710301-36710320 | Msa0545860:intron | 15.0% |
| !!! | ATTAATTTGTGTTTTATAAC+AGG | + | chr4_1:36710436-36710455 | Msa0545860:intron | 15.0% |
| !!! | TTAATTTGTGTTTTATAACA+GGG | + | chr4_1:36710437-36710456 | Msa0545860:intron | 15.0% |
| !!! | CTATTATTCATTTCAAATTT+TGG | + | chr4_1:36710643-36710662 | Msa0545860:intron | 15.0% |
| !! | GTAAGTAAACACATATTAAT+TGG | - | chr4_1:36704175-36704194 | None:intergenic | 20.0% |
| !! | AATTATTTGTGTATAAGGTA+CGG | + | chr4_1:36704388-36704407 | Msa0545860:intron | 20.0% |
| !!! | ACTTAATAAATTGAGAGTTT+TGG | - | chr4_1:36704486-36704505 | None:intergenic | 20.0% |
| !! | GTAATTAATGATGATTATGT+TGG | + | chr4_1:36704516-36704535 | Msa0545860:intron | 20.0% |
| !!! | AAAACTCTTAACATTCTTTT+TGG | + | chr4_1:36704680-36704699 | Msa0545860:intron | 20.0% |
| !!! | CATGCAATTTATTTTAGTAA+TGG | - | chr4_1:36705040-36705059 | None:intergenic | 20.0% |
| !!! | CAAAATTGCATATTTTCAAA+TGG | - | chr4_1:36705346-36705365 | None:intergenic | 20.0% |
| !!! | AATGACTTCATTCAATTTTT+TGG | + | chr4_1:36705626-36705645 | Msa0545860:intron | 20.0% |
| !! | GTCAAAAAATTGTTTGAAAA+TGG | + | chr4_1:36705798-36705817 | Msa0545860:intron | 20.0% |
| !!! | GAACAGTAACAATTTTTTAT+AGG | - | chr4_1:36705904-36705923 | None:intergenic | 20.0% |
| !!! | CTTTTTGAGAATATCATAAT+TGG | + | chr4_1:36706074-36706093 | Msa0545860:intron | 20.0% |
| !!! | TTTTCCTCAATAAAAAAAGT+TGG | + | chr4_1:36706201-36706220 | Msa0545860:intron | 20.0% |
| !!! | CTTCAAATTGAAATTTTCTT+GGG | - | chr4_1:36706876-36706895 | None:intergenic | 20.0% |
| !!! | CAATATAAGAGAAGTTTTTT+TGG | - | chr4_1:36706999-36707018 | None:intergenic | 20.0% |
| !! | TTACTTAATTTCAATAAGCA+TGG | - | chr4_1:36708022-36708041 | None:intergenic | 20.0% |
| !! | ATTAAAGGAACACATAATAA+AGG | - | chr4_1:36708626-36708645 | None:intergenic | 20.0% |
| !! | ATAAAAAGTGATCAAAATTG+TGG | - | chr4_1:36708851-36708870 | None:intergenic | 20.0% |
| !!! | TTGGGTAAAATTTTGATTAT+AGG | + | chr4_1:36708940-36708959 | Msa0545860:intron | 20.0% |
| !! | ACTATTATCATATAGACATT+TGG | - | chr4_1:36708975-36708994 | None:intergenic | 20.0% |
| !!! | AATTGTAGTTTTCAAAGTTA+GGG | - | chr4_1:36709332-36709351 | None:intergenic | 20.0% |
| !!! | AAATTGTAGTTTTCAAAGTT+AGG | - | chr4_1:36709333-36709352 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAACTACAATTT+TGG | + | chr4_1:36709333-36709352 | Msa0545860:intron | 20.0% |
| !!! | AAGTATGAAAACTACAATTT+TGG | - | chr4_1:36709526-36709545 | None:intergenic | 20.0% |
| !!! | AAATTGTAGTTTTCATACTT+AGG | + | chr4_1:36709526-36709545 | Msa0545860:intron | 20.0% |
| !!! | AATTGTAGTTTTCATACTTA+GGG | + | chr4_1:36709527-36709546 | Msa0545860:intron | 20.0% |
| !!! | AGTATAAATCAATTTTGACT+AGG | - | chr4_1:36709638-36709657 | None:intergenic | 20.0% |
| !! | AGAAATTGAATAACCTTTAA+AGG | - | chr4_1:36709951-36709970 | None:intergenic | 20.0% |
| !! | ATGTATTGAAATTAAACTCT+AGG | + | chr4_1:36710094-36710113 | Msa0545860:intron | 20.0% |
| !! | TGTATTGAAATTAAACTCTA+GGG | + | chr4_1:36710095-36710114 | Msa0545860:intron | 20.0% |
| !!! | TAATTTGTGTTTTATAACAG+GGG | + | chr4_1:36710438-36710457 | Msa0545860:intron | 20.0% |
| !!! | AATATGTACTTTGAAAATAG+CGG | - | chr4_1:36710490-36710509 | None:intergenic | 20.0% |
| !!! | TACTTTAACTTTTTCACCAA+TGG | + | chr4_1:36703995-36704014 | Msa0545860:exon | 25.0% |
| !! | ATGTACTATTGTAGTTTTTG+TGG | + | chr4_1:36704205-36704224 | Msa0545860:intron | 25.0% |
| ! | AGATAAAGTTTCTTCACATT+TGG | - | chr4_1:36704251-36704270 | None:intergenic | 25.0% |
| ! | AGGTATGTATAGACATTAAA+AGG | + | chr4_1:36704321-36704340 | Msa0545860:intron | 25.0% |
| ! | TGAGAGGAGTAAAAAAAAAA+AGG | - | chr4_1:36704649-36704668 | None:intergenic | 25.0% |
| ! | TAAGATTAGTACACAAAAGA+CGG | - | chr4_1:36705125-36705144 | None:intergenic | 25.0% |
| ! | AAGAAGAAAAAAAACCCTAA+AGG | + | chr4_1:36705203-36705222 | Msa0545860:intron | 25.0% |
| ! | TCAATTGTGTCAAGTATTAT+GGG | + | chr4_1:36705543-36705562 | Msa0545860:intron | 25.0% |
| ! | TGTAGCAGTCTATTTATTAT+AGG | + | chr4_1:36705600-36705619 | Msa0545860:intron | 25.0% |
| !! | TACAACTTTTATGACAACTT+TGG | + | chr4_1:36705686-36705705 | Msa0545860:intron | 25.0% |
| !!! | CTCTAATAACCTAACTTTTT+TGG | + | chr4_1:36705956-36705975 | Msa0545860:intron | 25.0% |
| ! | ATGAATTAGATTAGACAAGT+GGG | - | chr4_1:36706020-36706039 | None:intergenic | 25.0% |
| !!! | ACTTCCAACTTTTTTTATTG+AGG | - | chr4_1:36706208-36706227 | None:intergenic | 25.0% |
| ! | CTTGACCAAAAAAAAAAAGT+TGG | + | chr4_1:36706344-36706363 | Msa0545860:intron | 25.0% |
| ! | ATCCTAAAGTATATTTGTGA+TGG | + | chr4_1:36706606-36706625 | Msa0545860:intron | 25.0% |
| !! | CCTTCAAATTGAAATTTTCT+TGG | - | chr4_1:36706877-36706896 | None:intergenic | 25.0% |
| ! | CCAAGAAAATTTCAATTTGA+AGG | + | chr4_1:36706874-36706893 | Msa0545860:CDS | 25.0% |
| ! | AAGGTATAGTTATTTGTATC+TGG | + | chr4_1:36706973-36706992 | Msa0545860:intron | 25.0% |
| ! | CAAAAATTGTATTAACCTCA+GGG | + | chr4_1:36707249-36707268 | Msa0545860:CDS | 25.0% |
| ! | TTTGAAAAGCTCTCATTTAT+CGG | + | chr4_1:36707452-36707471 | Msa0545860:intron | 25.0% |
| ! | AAAGATGCATATTGGAATTT+AGG | - | chr4_1:36707511-36707530 | None:intergenic | 25.0% |
| !!! | AGATGAATTTTTCAATTACG+TGG | + | chr4_1:36707672-36707691 | Msa0545860:intron | 25.0% |
| ! | TGCATCTTAAGATAGTTATT+AGG | + | chr4_1:36707733-36707752 | Msa0545860:intron | 25.0% |
| ! | CATTTAGTATCAATCAATGT+AGG | + | chr4_1:36707992-36708011 | Msa0545860:intron | 25.0% |
| !! | ATTTTCAGAGCAAAGTTATA+TGG | + | chr4_1:36708406-36708425 | Msa0545860:intron | 25.0% |
| ! | TTTGTAAAGACATATGTGTT+TGG | - | chr4_1:36708436-36708455 | None:intergenic | 25.0% |
| ! | AAACACATATGTCTTTACAA+AGG | + | chr4_1:36708435-36708454 | Msa0545860:CDS | 25.0% |
| ! | TTAATTGTTGCATATGGTAA+AGG | + | chr4_1:36708711-36708730 | Msa0545860:CDS | 25.0% |
| !! | AAAATTTTACCCAAATCATG+TGG | - | chr4_1:36708934-36708953 | None:intergenic | 25.0% |
| !!! | GTTTTCTCTTTGTTTAATGT+AGG | - | chr4_1:36709038-36709057 | None:intergenic | 25.0% |
| ! | TTAATTAAGATCAGTTGACA+TGG | + | chr4_1:36709112-36709131 | Msa0545860:intron | 25.0% |
| !! | ATTGTAGTTTTCAAAGTTAG+GGG | - | chr4_1:36709331-36709350 | None:intergenic | 25.0% |
| !!! | GCAACATTTTGAAAAGATAA+GGG | + | chr4_1:36709437-36709456 | Msa0545860:intron | 25.0% |
| !!! | CAACATTTTGAAAAGATAAG+GGG | + | chr4_1:36709438-36709457 | Msa0545860:intron | 25.0% |
| !! | ATTGTAGTTTTCATACTTAG+GGG | + | chr4_1:36709528-36709547 | Msa0545860:intron | 25.0% |
| !! | GCTATTCATATTTTCCAATA+CGG | - | chr4_1:36709895-36709914 | None:intergenic | 25.0% |
| ! | AACGAATATACATGTATCTT+TGG | - | chr4_1:36709920-36709939 | None:intergenic | 25.0% |
| ! | TGGAAAAATAGAAGTAATTG+AGG | - | chr4_1:36709977-36709996 | None:intergenic | 25.0% |
| ! | TTAATAGATAACGAGTACAA+CGG | - | chr4_1:36710130-36710149 | None:intergenic | 25.0% |
| ! | AATTTAATATGCTAAGATCC+AGG | - | chr4_1:36710243-36710262 | None:intergenic | 25.0% |
| !!! | CAAGTTTAATTTTCTTTCGT+AGG | - | chr4_1:36710296-36710315 | None:intergenic | 25.0% |
| ! | GCTAGAGAGATTAATAATAT+TGG | + | chr4_1:36710986-36711005 | Msa0545860:three_prime_UTR | 25.0% |
| ! | AGAGAGATTAATAATATTGG+TGG | + | chr4_1:36710989-36711008 | Msa0545860:three_prime_UTR | 25.0% |
| ! | TTTAAACTTCTTATTACGTG+TGG | + | chr4_1:36711031-36711050 | Msa0545860:three_prime_UTR | 25.0% |
| ! | TTTTCACCAATGGATCAATT+TGG | + | chr4_1:36704005-36704024 | Msa0545860:exon | 30.0% |
| !!! | CATAAGAATGTTTTGGTACT+TGG | + | chr4_1:36704050-36704069 | Msa0545860:CDS | 30.0% |
| !! | TTATCTTCTTTTGAGAGCTA+CGG | + | chr4_1:36704265-36704284 | Msa0545860:CDS | 30.0% |
| TTATGTTGGTATCTTAAGTG+TGG | + | chr4_1:36704530-36704549 | Msa0545860:intron | 30.0% | |
| GTACTATAAGTGAGTAAAGA+TGG | + | chr4_1:36704589-36704608 | Msa0545860:intron | 30.0% | |
| ! | GAATGTTAAGAGTTTTCTCT+TGG | - | chr4_1:36704676-36704695 | None:intergenic | 30.0% |
| TCACAAAAATATCTTATCGG+TGG | + | chr4_1:36704870-36704889 | Msa0545860:intron | 30.0% | |
| AAATACGGTCAAAGTAAGTT+AGG | - | chr4_1:36705370-36705389 | None:intergenic | 30.0% | |
| ! | ATGCATTGACATGCTTAATA+AGG | + | chr4_1:36705520-36705539 | Msa0545860:intron | 30.0% |
| GTCAATTGTGTCAAGTATTA+TGG | + | chr4_1:36705542-36705561 | Msa0545860:intron | 30.0% | |
| !! | TTGGTTTTCTCTCTTTTGAT+TGG | + | chr4_1:36705705-36705724 | Msa0545860:intron | 30.0% |
| !!! | CCGTTTAAACTGCTATTTTT+GGG | - | chr4_1:36705932-36705951 | None:intergenic | 30.0% |
| CCCAAAAATAGCAGTTTAAA+CGG | + | chr4_1:36705929-36705948 | Msa0545860:intron | 30.0% | |
| !!! | ACCGTTTAAACTGCTATTTT+TGG | - | chr4_1:36705933-36705952 | None:intergenic | 30.0% |
| AAAATAGCAGTTTAAACGGT+TGG | + | chr4_1:36705933-36705952 | Msa0545860:intron | 30.0% | |
| ! | TAAGTGTTGCCAAAAAAGTT+AGG | - | chr4_1:36705968-36705987 | None:intergenic | 30.0% |
| CATGAATTAGATTAGACAAG+TGG | - | chr4_1:36706021-36706040 | None:intergenic | 30.0% | |
| AGAATATCATAATTGGTGAG+TGG | + | chr4_1:36706081-36706100 | Msa0545860:intron | 30.0% | |
| GGATAATGCATATATATGCA+GGG | + | chr4_1:36706253-36706272 | Msa0545860:intron | 30.0% | |
| GATAATGCATATATATGCAG+GGG | + | chr4_1:36706254-36706273 | Msa0545860:intron | 30.0% | |
| CACCATCACAAATATACTTT+AGG | - | chr4_1:36706611-36706630 | None:intergenic | 30.0% | |
| ! | TCATATGTAGATTTTGCGAA+AGG | + | chr4_1:36706763-36706782 | Msa0545860:intron | 30.0% |
| AAATTGCTGAAGGAAAATCA+TGG | + | chr4_1:36706794-36706813 | Msa0545860:CDS | 30.0% | |
| GTATAACTCTTGAAGTAGAT+TGG | - | chr4_1:36706903-36706922 | None:intergenic | 30.0% | |
| CAACAACTAACTTTGATGAA+AGG | + | chr4_1:36706954-36706973 | Msa0545860:CDS | 30.0% | |
| GCATTGGGTTTAAATACATT+TGG | + | chr4_1:36707202-36707221 | Msa0545860:CDS | 30.0% | |
| ! | CCTGAGGTTAATACAATTTT+TGG | - | chr4_1:36707251-36707270 | None:intergenic | 30.0% |
| CCAAAAATTGTATTAACCTC+AGG | + | chr4_1:36707248-36707267 | Msa0545860:CDS | 30.0% | |
| ! | AGAGCTTTTCAAACAATCTT+GGG | - | chr4_1:36707445-36707464 | None:intergenic | 30.0% |
| ! | ATCGGAAAGATAGTTTTTGA+TGG | + | chr4_1:36707470-36707489 | Msa0545860:intron | 30.0% |
| ! | ATAGTGGAAAAGATGCATAT+TGG | - | chr4_1:36707519-36707538 | None:intergenic | 30.0% |
| ! | TCTTTTCCACTATAATCTCT+CGG | + | chr4_1:36707526-36707545 | Msa0545860:intron | 30.0% |
| !! | TTTTTGAGCTTGAGCAATAT+AGG | + | chr4_1:36707586-36707605 | Msa0545860:intron | 30.0% |
| ! | GAAAAATAGTTTGTCAGAAG+TGG | - | chr4_1:36707760-36707779 | None:intergenic | 30.0% |
| !! | CTATTTTTCGCAATTCAATG+TGG | + | chr4_1:36707771-36707790 | Msa0545860:intron | 30.0% |
| TTATGTTCATATGTTGAGCT+TGG | - | chr4_1:36707875-36707894 | None:intergenic | 30.0% | |
| CTTGTCTATTACTCCATTTA+AGG | - | chr4_1:36707912-36707931 | None:intergenic | 30.0% | |
| GAATACCACAAAAGTTTAGT+TGG | + | chr4_1:36707953-36707972 | Msa0545860:intron | 30.0% | |
| !! | TAGTTGGTGAACTTAATATG+TGG | + | chr4_1:36707969-36707988 | Msa0545860:intron | 30.0% |
| TTAAATGTAGCATACGTATG+TGG | + | chr4_1:36708060-36708079 | Msa0545860:intron | 30.0% | |
| ATATGTCTTTACAAAGGCAA+TGG | + | chr4_1:36708441-36708460 | Msa0545860:CDS | 30.0% | |
| TATGTCTTTACAAAGGCAAT+GGG | + | chr4_1:36708442-36708461 | Msa0545860:CDS | 30.0% | |
| !! | TAAGTACTGGTAATGATTGT+AGG | - | chr4_1:36708520-36708539 | None:intergenic | 30.0% |
| TGCAACAATTAAACTGTCTA+TGG | - | chr4_1:36708703-36708722 | None:intergenic | 30.0% | |
| GACAGTTTAATTGTTGCATA+TGG | + | chr4_1:36708705-36708724 | Msa0545860:CDS | 30.0% | |
| ACAATGTATCCACATGATTT+GGG | + | chr4_1:36708922-36708941 | Msa0545860:intron | 30.0% | |
| ATGACATATATCTACGTTGA+TGG | - | chr4_1:36709151-36709170 | None:intergenic | 30.0% | |
| !! | TCGCAACTTTTTGAAAGATA+GGG | - | chr4_1:36709301-36709320 | None:intergenic | 30.0% |
| !! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr4_1:36709302-36709321 | None:intergenic | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr4_1:36709304-36709323 | Msa0545860:intron | 30.0% |
| ! | TTGTAGTTTTCAAAGTTAGG+GGG | - | chr4_1:36709330-36709349 | None:intergenic | 30.0% |
| ! | TCATCAGTTTTCAAAGTTAG+GGG | - | chr4_1:36709360-36709379 | None:intergenic | 30.0% |
| ! | CTCATCAGTTTTCAAAGTTA+GGG | - | chr4_1:36709361-36709380 | None:intergenic | 30.0% |
| ! | TCTCATCAGTTTTCAAAGTT+AGG | - | chr4_1:36709362-36709381 | None:intergenic | 30.0% |
| ACGTGTCCAAAAAAAGATAA+GGG | + | chr4_1:36709389-36709408 | Msa0545860:intron | 30.0% | |
| !!! | TTAACCCCCTTATCTTTTTT+TGG | - | chr4_1:36709398-36709417 | None:intergenic | 30.0% |
| ATAAGGGGGTTAAAAGATAA+GGG | + | chr4_1:36709405-36709424 | Msa0545860:intron | 30.0% | |
| !! | CGCAACATTTTGAAAAGATA+AGG | + | chr4_1:36709436-36709455 | Msa0545860:intron | 30.0% |
| AGACATATTTCCCTTATGTT+AGG | + | chr4_1:36709466-36709485 | Msa0545860:intron | 30.0% | |
| GACATATTTCCCTTATGTTA+GGG | + | chr4_1:36709467-36709486 | Msa0545860:intron | 30.0% | |
| ACATATTTCCCTTATGTTAG+GGG | + | chr4_1:36709468-36709487 | Msa0545860:intron | 30.0% | |
| ! | TTGTAGTTTTCATACTTAGG+GGG | + | chr4_1:36709529-36709548 | Msa0545860:intron | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr4_1:36709304-36709323 | None:intergenic | 30.0% |
| !! | TCGCAACTTTTTGAAAGTTA+AGG | + | chr4_1:36709558-36709577 | Msa0545860:intron | 30.0% |
| !! | CGCAACTTTTTGAAAGTTAA+GGG | + | chr4_1:36709559-36709578 | Msa0545860:intron | 30.0% |
| !! | GCAACTTTTTGAAAGTTAAG+GGG | + | chr4_1:36709560-36709579 | Msa0545860:intron | 30.0% |
| !! | CAACTTTTTGAAAGTTAAGG+GGG | + | chr4_1:36709561-36709580 | Msa0545860:intron | 30.0% |
| !! | AACTTTTTGAAAGTTAAGGG+GGG | + | chr4_1:36709562-36709581 | Msa0545860:intron | 30.0% |
| TGATATATGCTATCATCACA+AGG | - | chr4_1:36709750-36709769 | None:intergenic | 30.0% | |
| ! | CTACAGCTTCAGATATTTTA+CGG | + | chr4_1:36709818-36709837 | Msa0545860:CDS | 30.0% |
| !! | AGTCAATTGTTTTGCATGAA+TGG | - | chr4_1:36709997-36710016 | None:intergenic | 30.0% |
| !! | TGAAATTAAACTCTAGGGTT+TGG | + | chr4_1:36710100-36710119 | Msa0545860:intron | 30.0% |
| !! | GAAATTAAACTCTAGGGTTT+GGG | + | chr4_1:36710101-36710120 | Msa0545860:intron | 30.0% |
| TAATAGATAACGAGTACAAC+GGG | - | chr4_1:36710129-36710148 | None:intergenic | 30.0% | |
| GTAAGTACATAAAAGTGGTA+GGG | + | chr4_1:36710211-36710230 | Msa0545860:intron | 30.0% | |
| TTTCGTAGGTACAATTCATA+CGG | - | chr4_1:36710282-36710301 | None:intergenic | 30.0% | |
| !!! | GTACATATTTTGATATCAGC+AGG | + | chr4_1:36710501-36710520 | Msa0545860:CDS | 30.0% |
| !!! | ATATTTTGATATCAGCAGGA+AGG | + | chr4_1:36710505-36710524 | Msa0545860:CDS | 30.0% |
| TTGACCCAAAAATGATTAAC+TGG | + | chr4_1:36710829-36710848 | Msa0545860:CDS | 30.0% | |
| TGACCCAAAAATGATTAACT+GGG | + | chr4_1:36710830-36710849 | Msa0545860:CDS | 30.0% | |
| TTCATGAACATTCATATTCC+TGG | + | chr4_1:36710861-36710880 | Msa0545860:CDS | 30.0% | |
| CAGAATATAGTTTCACTTGA+AGG | - | chr4_1:36710901-36710920 | None:intergenic | 30.0% | |
| !!! | CTCAATTGAGTTTCAAGTTT+TGG | - | chr4_1:36710955-36710974 | None:intergenic | 30.0% |
| ATACTGCCAAATTGATCCAT+TGG | - | chr4_1:36704014-36704033 | None:intergenic | 35.0% | |
| CCAAAACATTCTTATGCTCA+AGG | - | chr4_1:36704046-36704065 | None:intergenic | 35.0% | |
| ! | CCTTGAGCATAAGAATGTTT+TGG | + | chr4_1:36704043-36704062 | Msa0545860:CDS | 35.0% |
| AAAGAGAGTTACTCTTTGCA+AGG | - | chr4_1:36704088-36704107 | None:intergenic | 35.0% | |
| TATTTGTGTATAAGGTACGG+TGG | + | chr4_1:36704391-36704410 | Msa0545860:intron | 35.0% | |
| AACACAAGGACAAAAAGAGA+GGG | - | chr4_1:36704435-36704454 | None:intergenic | 35.0% | |
| AAACACAAGGACAAAAAGAG+AGG | - | chr4_1:36704436-36704455 | None:intergenic | 35.0% | |
| ATGTCTCATGAAGAAACACA+AGG | - | chr4_1:36704449-36704468 | None:intergenic | 35.0% | |
| TCCAAATCTACTGTTGTTGT+CGG | + | chr4_1:36704899-36704918 | Msa0545860:intron | 35.0% | |
| TCATGCATATGCTCTTTCTT+TGG | + | chr4_1:36704957-36704976 | Msa0545860:intron | 35.0% | |
| ! | ATGCTCTTTCTTTGGTAACA+TGG | + | chr4_1:36704965-36704984 | Msa0545860:intron | 35.0% |
| !! | GTACACAAAAGACGGATTTT+TGG | - | chr4_1:36705117-36705136 | None:intergenic | 35.0% |
| !! | TGGTGTCTTTTTCACCTTTA+GGG | - | chr4_1:36705220-36705239 | None:intergenic | 35.0% |
| !! | TTGGTGTCTTTTTCACCTTT+AGG | - | chr4_1:36705221-36705240 | None:intergenic | 35.0% |
| TTCAAATGGGTCATCTATTG+CGG | - | chr4_1:36705332-36705351 | None:intergenic | 35.0% | |
| TTGTGTCAAGTATTATGGGA+TGG | + | chr4_1:36705547-36705566 | Msa0545860:intron | 35.0% | |
| ! | ATGGAGGGAGTAACATTTTA+AGG | + | chr4_1:36705566-36705585 | Msa0545860:intron | 35.0% |
| GGGATAATGCATATATATGC+AGG | + | chr4_1:36706252-36706271 | Msa0545860:intron | 35.0% | |
| ACCTTAAAGGTGAATAAGTG+GGG | - | chr4_1:36706301-36706320 | None:intergenic | 35.0% | |
| CACCTTAAAGGTGAATAAGT+GGG | - | chr4_1:36706302-36706321 | None:intergenic | 35.0% | |
| TCACCTTAAAGGTGAATAAG+TGG | - | chr4_1:36706303-36706322 | None:intergenic | 35.0% | |
| GCTAGAGAAATTCACCTTAA+AGG | - | chr4_1:36706314-36706333 | None:intergenic | 35.0% | |
| GGCAAATAGTGCATTATGAT+TGG | + | chr4_1:36706457-36706476 | Msa0545860:intron | 35.0% | |
| ATGCAGATATGATGTAGCAT+TGG | + | chr4_1:36707186-36707205 | Msa0545860:intron | 35.0% | |
| TGCAGATATGATGTAGCATT+GGG | + | chr4_1:36707187-36707206 | Msa0545860:intron | 35.0% | |
| AATACAAACCTGTTGATACG+TGG | - | chr4_1:36707282-36707301 | None:intergenic | 35.0% | |
| ! | GAGAGCTTTTCAAACAATCT+TGG | - | chr4_1:36707446-36707465 | None:intergenic | 35.0% |
| TAGAATCCGAGAGATTATAG+TGG | - | chr4_1:36707535-36707554 | None:intergenic | 35.0% | |
| !!! | CTCGGATTCTAAGTTTTGTT+AGG | + | chr4_1:36707544-36707563 | Msa0545860:intron | 35.0% |
| CTACAAGTGTACAAGAAAAG+TGG | + | chr4_1:36707709-36707728 | Msa0545860:intron | 35.0% | |
| ACTGCAACACATACCTTAAA+TGG | + | chr4_1:36707896-36707915 | Msa0545860:intron | 35.0% | |
| ! | GTTCACCAACTAAACTTTTG+TGG | - | chr4_1:36707961-36707980 | None:intergenic | 35.0% |
| CATTTAGTGAAACACCAAGT+TGG | - | chr4_1:36708119-36708138 | None:intergenic | 35.0% | |
| !! | CAACTTGGTGTTTCACTAAA+TGG | + | chr4_1:36708117-36708136 | Msa0545860:CDS | 35.0% |
| ATTGAACATGCTTCAACAAG+AGG | + | chr4_1:36708188-36708207 | Msa0545860:CDS | 35.0% | |
| TTGAACATGCTTCAACAAGA+GGG | + | chr4_1:36708189-36708208 | Msa0545860:CDS | 35.0% | |
| GGATACTAAAATTGCCATGA+AGG | + | chr4_1:36708224-36708243 | Msa0545860:CDS | 35.0% | |
| TAAAATTGCCATGAAGGACT+TGG | + | chr4_1:36708230-36708249 | Msa0545860:CDS | 35.0% | |
| AAAATTGCCATGAAGGACTT+GGG | + | chr4_1:36708231-36708250 | Msa0545860:CDS | 35.0% | |
| TCAGAGCAAAGTTATATGGA+TGG | + | chr4_1:36708410-36708429 | Msa0545860:intron | 35.0% | |
| AATGCTAGTTGGAACTATGA+AGG | + | chr4_1:36708468-36708487 | Msa0545860:CDS | 35.0% | |
| GAAAGGTTCTTTGTAAGTAC+TGG | - | chr4_1:36708533-36708552 | None:intergenic | 35.0% | |
| GACAATGTATCCACATGATT+TGG | + | chr4_1:36708921-36708940 | Msa0545860:intron | 35.0% | |
| !! | TTCAAAAGAGTGTGACGTTT+TGG | - | chr4_1:36709206-36709225 | None:intergenic | 35.0% |
| !! | AACGTCACACTCTTTTGAAA+TGG | + | chr4_1:36709207-36709226 | Msa0545860:intron | 35.0% |
| !!! | ACGTCACACTCTTTTGAAAT+GGG | + | chr4_1:36709208-36709227 | Msa0545860:intron | 35.0% |
| ! | GTGCACTTTATGCACAATTT+TGG | - | chr4_1:36709271-36709290 | None:intergenic | 35.0% |
| !! | CAACTTTTTGAAAGATAGGG+AGG | - | chr4_1:36709298-36709317 | None:intergenic | 35.0% |
| CACGTGTCCAAAAAAAGATA+AGG | + | chr4_1:36709388-36709407 | Msa0545860:intron | 35.0% | |
| CGTGTCCAAAAAAAGATAAG+GGG | + | chr4_1:36709390-36709409 | Msa0545860:intron | 35.0% | |
| GTGTCCAAAAAAAGATAAGG+GGG | + | chr4_1:36709391-36709410 | Msa0545860:intron | 35.0% | |
| GATAAGGGGGTTAAAAGATA+AGG | + | chr4_1:36709404-36709423 | Msa0545860:intron | 35.0% | |
| TAAGGGGGTTAAAAGATAAG+GGG | + | chr4_1:36709406-36709425 | Msa0545860:intron | 35.0% | |
| CATATTTCCCTTATGTTAGG+GGG | + | chr4_1:36709469-36709488 | Msa0545860:intron | 35.0% | |
| ! | CTTTTAACCCCCTAACATAA+GGG | - | chr4_1:36709479-36709498 | None:intergenic | 35.0% |
| ! | TCTTTTAACCCCCTAACATA+AGG | - | chr4_1:36709480-36709499 | None:intergenic | 35.0% |
| AGAGCATATTTCCCTAAACA+TGG | + | chr4_1:36709497-36709516 | Msa0545860:intron | 35.0% | |
| GAGCATATTTCCCTAAACAT+GGG | + | chr4_1:36709498-36709517 | Msa0545860:intron | 35.0% | |
| AGCATATTTCCCTAAACATG+GGG | + | chr4_1:36709499-36709518 | Msa0545860:intron | 35.0% | |
| TGATGATAGCATATATCACG+TGG | + | chr4_1:36709752-36709771 | Msa0545860:CDS | 35.0% | |
| GATGATAGCATATATCACGT+GGG | + | chr4_1:36709753-36709772 | Msa0545860:CDS | 35.0% | |
| !!! | AAACCATGTTTTGACAAGGA+AGG | + | chr4_1:36709843-36709862 | Msa0545860:CDS | 35.0% |
| TCGTTACTTGCTTCCTTTAA+AGG | + | chr4_1:36709935-36709954 | Msa0545860:CDS | 35.0% | |
| GCAACGTAAGTACATAAAAG+TGG | + | chr4_1:36710206-36710225 | Msa0545860:intron | 35.0% | |
| CGTAAGTACATAAAAGTGGT+AGG | + | chr4_1:36710210-36710229 | Msa0545860:intron | 35.0% | |
| !! | CCTCCCAGTTAATCATTTTT+GGG | - | chr4_1:36710836-36710855 | None:intergenic | 35.0% |
| ! | TCCTCCCAGTTAATCATTTT+TGG | - | chr4_1:36710837-36710856 | None:intergenic | 35.0% |
| AAGGAATATTTGACAATGCC+AGG | - | chr4_1:36710882-36710901 | None:intergenic | 35.0% | |
| GTGTGGTAAATATCTCACGT+TGG | + | chr4_1:36704547-36704566 | Msa0545860:intron | 40.0% | |
| GGTAAATATCTCACGTTGGA+TGG | + | chr4_1:36704551-36704570 | Msa0545860:intron | 40.0% | |
| ! | GTTTTCTCTTGGATCATGAG+AGG | - | chr4_1:36704665-36704684 | None:intergenic | 40.0% |
| ACCGACAACAACAGTAGATT+TGG | - | chr4_1:36704903-36704922 | None:intergenic | 40.0% | |
| CTCACCAATGTCATGTAGAA+CGG | + | chr4_1:36704930-36704949 | Msa0545860:intron | 40.0% | |
| TGTCAAGTATTATGGGATGG+AGG | + | chr4_1:36705550-36705569 | Msa0545860:intron | 40.0% | |
| GTCAAGTATTATGGGATGGA+GGG | + | chr4_1:36705551-36705570 | Msa0545860:intron | 40.0% | |
| ATGCATATATATGCAGGGGT+CGG | + | chr4_1:36706258-36706277 | Msa0545860:intron | 40.0% | |
| ACCCCACTTATTCACCTTTA+AGG | + | chr4_1:36706297-36706316 | Msa0545860:intron | 40.0% | |
| !! | TTTTTGGTCAAGTAGCCTAG+CGG | - | chr4_1:36706336-36706355 | None:intergenic | 40.0% |
| CTATTTGCCACAATTCAAGG+AGG | - | chr4_1:36706446-36706465 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr4_1:36706449-36706468 | None:intergenic | 40.0% | |
| GAGGTGGGTGTGAAAATTAA+TGG | - | chr4_1:36706658-36706677 | None:intergenic | 40.0% | |
| ! | GGACTTGTTCAAATTGCTGA+AGG | + | chr4_1:36706784-36706803 | Msa0545860:CDS | 40.0% |
| AAAAAGTGACTCTAGTGCCT+GGG | + | chr4_1:36706843-36706862 | Msa0545860:CDS | 40.0% | |
| GGTTAATCTTACGTGCTAGT+AGG | - | chr4_1:36707847-36707866 | None:intergenic | 40.0% | |
| ! | CATATGTTGAGCTTGGTTCT+AGG | - | chr4_1:36707868-36707887 | None:intergenic | 40.0% |
| !! | AGTGAAACACCAAGTTGGTA+TGG | - | chr4_1:36708114-36708133 | None:intergenic | 40.0% |
| GTTTCACTAAATGGAGTGCA+AGG | + | chr4_1:36708126-36708145 | Msa0545860:CDS | 40.0% | |
| TGAGGAAAAGAGAGTAGTTG+AGG | + | chr4_1:36708161-36708180 | Msa0545860:CDS | 40.0% | |
| TGTAGGACGCACAATAACAA+TGG | - | chr4_1:36708503-36708522 | None:intergenic | 40.0% | |
| ACTTACAAAGAACCTTTCCC+TGG | + | chr4_1:36708535-36708554 | Msa0545860:CDS | 40.0% | |
| ! | CTTAGAGGCAGTTTTTGATG+TGG | + | chr4_1:36708758-36708777 | Msa0545860:CDS | 40.0% |
| ! | CAGTTTTTGATGTGGTGAGA+AGG | + | chr4_1:36708766-36708785 | Msa0545860:intron | 40.0% |
| TAATGTAGGAGAAGATGTCG+TGG | - | chr4_1:36709024-36709043 | None:intergenic | 40.0% | |
| !!! | CGTCACACTCTTTTGAAATG+GGG | + | chr4_1:36709209-36709228 | Msa0545860:intron | 40.0% |
| GCATATTTCCCTAAACATGG+GGG | + | chr4_1:36709500-36709519 | Msa0545860:intron | 40.0% | |
| !! | AATTTTGGCCCCCATGTTTA+GGG | - | chr4_1:36709511-36709530 | None:intergenic | 40.0% |
| !! | TTGATTTGCATGACTCACCA+TGG | - | chr4_1:36709727-36709746 | None:intergenic | 40.0% |
| CTAAGACTCTCATATCTCAC+AGG | - | chr4_1:36709795-36709814 | None:intergenic | 40.0% | |
| !!! | GGCAAAACCATGTTTTGACA+AGG | + | chr4_1:36709839-36709858 | Msa0545860:CDS | 40.0% |
| CTTCCTTCCTTGTCAAAACA+TGG | - | chr4_1:36709849-36709868 | None:intergenic | 40.0% | |
| GGTAACTTTGCCAACTTTGA+TGG | - | chr4_1:36709874-36709893 | None:intergenic | 40.0% | |
| AGTTGGCAAAGTTACCGTAT+TGG | + | chr4_1:36709878-36709897 | Msa0545860:CDS | 40.0% | |
| TTAAGCGTATACCCGCAAAA+CGG | + | chr4_1:36710179-36710198 | Msa0545860:intron | 40.0% | |
| ! | AAAGTGGTAGGGTTTTTACC+TGG | + | chr4_1:36710222-36710241 | Msa0545860:intron | 40.0% |
| ACGCCATTGAAGAACACATA+GGG | - | chr4_1:36710566-36710585 | None:intergenic | 40.0% | |
| CAAATAGCAGCAAGACAAAG+TGG | + | chr4_1:36710783-36710802 | Msa0545860:CDS | 40.0% | |
| AAGACAAAGTGGAGTAGAGA+TGG | + | chr4_1:36710794-36710813 | Msa0545860:CDS | 40.0% | |
| CCCAAAAATGATTAACTGGG+AGG | + | chr4_1:36710833-36710852 | Msa0545860:CDS | 40.0% | |
| CTCATTGTGCAGTCTTCTAG+TGG | - | chr4_1:36704303-36704322 | None:intergenic | 45.0% | |
| CACTAGAAGACTGCACAATG+AGG | + | chr4_1:36704301-36704320 | Msa0545860:CDS | 45.0% | |
| GTGACAAACGTTACGTCTCT+TGG | + | chr4_1:36704830-36704849 | Msa0545860:intron | 45.0% | |
| CGTTCTACATGACATTGGTG+AGG | - | chr4_1:36704932-36704951 | None:intergenic | 45.0% | |
| ACCAATGTCATGTAGAACGG+TGG | + | chr4_1:36704933-36704952 | Msa0545860:intron | 45.0% | |
| TCCACCGTTCTACATGACAT+TGG | - | chr4_1:36704937-36704956 | None:intergenic | 45.0% | |
| ATGGGTCATCTATTGCGGAA+CGG | - | chr4_1:36705327-36705346 | None:intergenic | 45.0% | |
| TTACCAAGTGAGCTTCTCAC+GGG | - | chr4_1:36706232-36706251 | None:intergenic | 45.0% | |
| CTTACCAAGTGAGCTTCTCA+CGG | - | chr4_1:36706233-36706252 | None:intergenic | 45.0% | |
| GTGAGAAGCTCACTTGGTAA+GGG | + | chr4_1:36706232-36706251 | Msa0545860:intron | 45.0% | |
| TGCATATATATGCAGGGGTC+GGG | + | chr4_1:36706259-36706278 | Msa0545860:intron | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr4_1:36706429-36706448 | None:intergenic | 45.0% |
| GAAAAAGTGACTCTAGTGCC+TGG | + | chr4_1:36706842-36706861 | Msa0545860:CDS | 45.0% | |
| AAAAGTGACTCTAGTGCCTG+GGG | + | chr4_1:36706844-36706863 | Msa0545860:CDS | 45.0% | |
| ! | TTTTCTTGGGAAATGTCCCC+AGG | - | chr4_1:36706863-36706882 | None:intergenic | 45.0% |
| GTAGAGGATCCATACCAACT+TGG | + | chr4_1:36708102-36708121 | Msa0545860:CDS | 45.0% | |
| GCAAGGACTAGACATTGATG+AGG | + | chr4_1:36708143-36708162 | Msa0545860:CDS | 45.0% | |
| ACAAGAGGGAGCTACTGAAA+AGG | + | chr4_1:36708203-36708222 | Msa0545860:CDS | 45.0% | |
| TTCCATTCCCAAGTCCTTCA+TGG | - | chr4_1:36708241-36708260 | None:intergenic | 45.0% | |
| TGAAGGACTTGGGAATGGAA+AGG | + | chr4_1:36708241-36708260 | Msa0545860:CDS | 45.0% | |
| GCAATGGGAGAAATGCTAGT+TGG | + | chr4_1:36708457-36708476 | Msa0545860:CDS | 45.0% | |
| ACAAAGAACCTTTCCCTGGT+TGG | + | chr4_1:36708539-36708558 | Msa0545860:CDS | 45.0% | |
| CAAAGAACCTTTCCCTGGTT+GGG | + | chr4_1:36708540-36708559 | Msa0545860:CDS | 45.0% | |
| ATGCTTCCTTGCAGACTTAG+AGG | + | chr4_1:36708743-36708762 | Msa0545860:CDS | 45.0% | |
| AAACTGCCTCTAAGTCTGCA+AGG | - | chr4_1:36708752-36708771 | None:intergenic | 45.0% | |
| !! | CAATTTTGGCCCCCATGTTT+AGG | - | chr4_1:36709512-36709531 | None:intergenic | 45.0% |
| CATTCACCACCATATCAGCA+GGG | - | chr4_1:36709692-36709711 | None:intergenic | 45.0% | |
| ATCACGTGGGTTCATCTGTT+CGG | + | chr4_1:36709766-36709785 | Msa0545860:CDS | 45.0% | |
| GAAGGAAGAGCCATCAAAGT+TGG | + | chr4_1:36709861-36709880 | Msa0545860:CDS | 45.0% | |
| ! | TACGTTGCAAGTCCGTTTTG+CGG | - | chr4_1:36710194-36710213 | None:intergenic | 45.0% |
| ! | TGCGGTTGGTTGAACTTTAC+AGG | + | chr4_1:36710540-36710559 | Msa0545860:CDS | 45.0% |
| AGGCCCTATGTGTTCTTCAA+TGG | + | chr4_1:36710560-36710579 | Msa0545860:CDS | 45.0% | |
| CACGCCATTGAAGAACACAT+AGG | - | chr4_1:36710567-36710586 | None:intergenic | 45.0% | |
| !! | TAATAATTAAAGAAAATTAA+AGG | - | chr4_1:36708641-36708660 | None:intergenic | 5.0% |
| !!! | AAAAATATTAATATGATTTT+TGG | + | chr4_1:36709084-36709103 | Msa0545860:intron | 5.0% |
| !!! | GTTTTGGTACTTGGTGCTGC+TGG | + | chr4_1:36704059-36704078 | Msa0545860:CDS | 50.0% |
| AAGATGGTGTCCACCCTTGT+CGG | + | chr4_1:36704605-36704624 | Msa0545860:intron | 50.0% | |
| TACCGAGAGTAACCCGACAA+GGG | - | chr4_1:36704621-36704640 | None:intergenic | 50.0% | |
| ATACCGAGAGTAACCCGACA+AGG | - | chr4_1:36704622-36704641 | None:intergenic | 50.0% | |
| GTCATCTATTGCGGAACGGA+GGG | - | chr4_1:36705323-36705342 | None:intergenic | 50.0% | |
| TACCAAGTGAGCTTCTCACG+GGG | - | chr4_1:36706231-36706250 | None:intergenic | 50.0% | |
| CGTGAGAAGCTCACTTGGTA+AGG | + | chr4_1:36706231-36706250 | Msa0545860:intron | 50.0% | |
| GCATATATATGCAGGGGTCG+GGG | + | chr4_1:36706260-36706279 | Msa0545860:intron | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | - | chr4_1:36706294-36706313 | None:intergenic | 50.0% |
| GGTGAATTTCTCTAGCCGCT+AGG | + | chr4_1:36706318-36706337 | Msa0545860:intron | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr4_1:36706436-36706455 | Msa0545860:intron | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr4_1:36706441-36706460 | None:intergenic | 50.0% | |
| ! | ATTTTCACACCCACCTCACG+TGG | + | chr4_1:36706661-36706680 | Msa0545860:intron | 50.0% |
| ! | TTTTCACACCCACCTCACGT+GGG | + | chr4_1:36706662-36706681 | Msa0545860:intron | 50.0% |
| GTGCTTGTCCACGTATCAAC+AGG | + | chr4_1:36707271-36707290 | Msa0545860:CDS | 50.0% | |
| GCATACGTATGTGGAGAGAG+AGG | + | chr4_1:36708069-36708088 | Msa0545860:intron | 50.0% | |
| TACGTATGTGGAGAGAGAGG+AGG | + | chr4_1:36708072-36708091 | Msa0545860:CDS | 50.0% | |
| GAGAGGAGGACTGATAGTAG+AGG | + | chr4_1:36708086-36708105 | Msa0545860:CDS | 50.0% | |
| TGCCATGAAGGACTTGGGAA+TGG | + | chr4_1:36708236-36708255 | Msa0545860:CDS | 50.0% | |
| TTACTCCTTCGACCCAACCA+GGG | - | chr4_1:36708555-36708574 | None:intergenic | 50.0% | |
| GAAGCAGATCCCTGCTGATA+TGG | + | chr4_1:36709680-36709699 | Msa0545860:intron | 50.0% | |
| GCATTCACCACCATATCAGC+AGG | - | chr4_1:36709693-36709712 | None:intergenic | 50.0% | |
| GGTGGTGAATGCAATGCTAG+TGG | + | chr4_1:36709701-36709720 | Msa0545860:CDS | 50.0% | |
| GAATGCAATGCTAGTGGCCA+TGG | + | chr4_1:36709707-36709726 | Msa0545860:CDS | 50.0% | |
| ! | ACGTTGCAAGTCCGTTTTGC+GGG | - | chr4_1:36710193-36710212 | None:intergenic | 50.0% |
| GGAAGGTCCATACTGTGATG+CGG | + | chr4_1:36710522-36710541 | Msa0545860:CDS | 50.0% | |
| CAACCAACCGCATCACAGTA+TGG | - | chr4_1:36710532-36710551 | None:intergenic | 50.0% | |
| AGATGGTGTCCACCCTTGTC+GGG | + | chr4_1:36704606-36704625 | Msa0545860:intron | 55.0% | |
| CACCCTTGTCGGGTTACTCT+CGG | + | chr4_1:36704616-36704635 | Msa0545860:intron | 55.0% | |
| GGTCATCTATTGCGGAACGG+AGG | - | chr4_1:36705324-36705343 | None:intergenic | 55.0% | |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr4_1:36706292-36706311 | None:intergenic | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr4_1:36706293-36706312 | None:intergenic | 55.0% |
| TTTCACACCCACCTCACGTG+GGG | + | chr4_1:36706663-36706682 | Msa0545860:intron | 55.0% | |
| ATACGTGGACAAGCACCCTG+AGG | - | chr4_1:36707267-36707286 | None:intergenic | 55.0% | |
| CTTACTCCTTCGACCCAACC+AGG | - | chr4_1:36708556-36708575 | None:intergenic | 55.0% | |
| CTGGTTGGGTCGAAGGAGTA+AGG | + | chr4_1:36708554-36708573 | Msa0545860:CDS | 55.0% | |
| GCAGATCCCTGCTGATATGG+TGG | + | chr4_1:36709683-36709702 | Msa0545860:intron | 55.0% | |
| GGTCCATACTGTGATGCGGT+TGG | + | chr4_1:36710526-36710545 | Msa0545860:CDS | 55.0% | |
| CGAGAGTAACCCGACAAGGG+TGG | - | chr4_1:36704618-36704637 | None:intergenic | 60.0% | |
| GTCCCCGTGAGAAGCTCACT+TGG | + | chr4_1:36706226-36706245 | Msa0545860:intron | 60.0% | |
| CCTTCGACCCAACCAGGGAA+AGG | - | chr4_1:36708550-36708569 | None:intergenic | 60.0% | |
| CCTTTCCCTGGTTGGGTCGA+AGG | + | chr4_1:36708547-36708566 | Msa0545860:CDS | 60.0% | |
| CAAGCCTCCCCACGTGAGGT+GGG | - | chr4_1:36706673-36706692 | None:intergenic | 65.0% | |
| TAGCCAAGCCTCCCCACGTG+AGG | - | chr4_1:36706677-36706696 | None:intergenic | 65.0% | |
| AGGGGTCGGGGTTCGAACCC+CGG | + | chr4_1:36706272-36706291 | Msa0545860:intron | 70.0% | |
| CACACCCACCTCACGTGGGG+AGG | + | chr4_1:36706666-36706685 | Msa0545860:intron | 70.0% | |
| CCAAGCCTCCCCACGTGAGG+TGG | - | chr4_1:36706674-36706693 | None:intergenic | 70.0% | |
| CCACCTCACGTGGGGAGGCT+TGG | + | chr4_1:36706671-36706690 | Msa0545860:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 36703898 | 36711089 | 36703898 | ID=Msa0545860;Name=Msa0545860 |
| chr4_1 | mRNA | 36703898 | 36711089 | 36703898 | ID=Msa0545860-mRNA-1;Parent=Msa0545860;Name=Msa0545860-mRNA-1;_AED=0.08;_eAED=0.08;_QI=116|1|1|1|0.9|0.81|11|131|492 |
| chr4_1 | exon | 36703898 | 36704095 | 36703898 | ID=Msa0545860-mRNA-1:exon:9301;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36704219 | 36704322 | 36704219 | ID=Msa0545860-mRNA-1:exon:9302;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36706773 | 36706975 | 36706773 | ID=Msa0545860-mRNA-1:exon:9303;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36707192 | 36707292 | 36707192 | ID=Msa0545860-mRNA-1:exon:9304;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36708070 | 36708262 | 36708070 | ID=Msa0545860-mRNA-1:exon:9305;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36708414 | 36708575 | 36708414 | ID=Msa0545860-mRNA-1:exon:9306;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36708698 | 36708779 | 36708698 | ID=Msa0545860-mRNA-1:exon:9307;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36709687 | 36709956 | 36709687 | ID=Msa0545860-mRNA-1:exon:9308;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36710458 | 36710585 | 36710458 | ID=Msa0545860-mRNA-1:exon:9309;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36710755 | 36710929 | 36710755 | ID=Msa0545860-mRNA-1:exon:9310;Parent=Msa0545860-mRNA-1 |
| chr4_1 | exon | 36710980 | 36711089 | 36710980 | ID=Msa0545860-mRNA-1:exon:9311;Parent=Msa0545860-mRNA-1 |
| chr4_1 | five_prime_UTR | 36703898 | 36704013 | 36703898 | ID=Msa0545860-mRNA-1:five_prime_utr;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36704014 | 36704095 | 36704014 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36704219 | 36704322 | 36704219 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36706773 | 36706975 | 36706773 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36707192 | 36707292 | 36707192 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36708070 | 36708262 | 36708070 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36708414 | 36708575 | 36708414 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36708698 | 36708779 | 36708698 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36709687 | 36709956 | 36709687 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36710458 | 36710585 | 36710458 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | CDS | 36710755 | 36710908 | 36710755 | ID=Msa0545860-mRNA-1:cds;Parent=Msa0545860-mRNA-1 |
| chr4_1 | three_prime_UTR | 36710909 | 36710929 | 36710909 | ID=Msa0545860-mRNA-1:three_prime_utr;Parent=Msa0545860-mRNA-1 |
| chr4_1 | three_prime_UTR | 36710980 | 36711089 | 36710980 | ID=Msa0545860-mRNA-1:three_prime_utr;Parent=Msa0545860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
