AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644030 MtrunA17_Chr4g0030911 83.794 253 2 3 1 253 1 214 4.72e-147 409
Msa0644030 MtrunA17_Chr1g0182321 77.165 254 18 4 1 253 1 215 6.94e-136 381
Msa0644030 MtrunA17_Chr1g0182301 76.772 254 19 4 1 253 1 215 4.05e-135 379
Msa0644030 MtrunA17_Chr1g0212521 78.279 244 13 4 11 253 11 215 1.88e-128 362
Msa0644030 MtrunA17_Chr7g0263071 79.098 244 11 4 11 253 11 215 3.87e-125 354
Msa0644030 MtrunA17_Chr2g0327911 63.386 254 51 5 1 253 1 213 1.95e-104 301
Msa0644030 MtrunA17_Chr7g0250531 52.869 244 66 7 11 252 4 200 1.25e-75 228
Msa0644030 MtrunA17_Chr4g0055651 50.820 244 71 7 11 252 4 200 2.82e-74 224
Msa0644030 MtrunA17_Chr8g0335471 51.429 245 69 7 11 252 4 201 1.03e-72 221
Msa0644030 MtrunA17_Chr2g0276931 47.131 244 83 6 11 253 5 203 9.29e-68 208
Msa0644030 MtrunA17_Chr6g0458081 40.323 248 101 6 12 252 3 210 9.28e-50 162
Msa0644030 MtrunA17_Chr2g0290891 39.516 248 103 5 12 252 3 210 2.20e-49 161
Msa0644030 MtrunA17_Chr4g0032201 48.171 164 72 3 7 170 4 154 1.77e-48 159
Msa0644030 MtrunA17_Chr3g0112681 38.889 252 99 6 11 252 8 214 2.81e-48 159
Msa0644030 MtrunA17_Chr2g0315551 50.000 164 69 3 7 170 5 155 1.11e-46 154
Msa0644030 MtrunA17_Chr2g0276941 48.125 160 70 3 11 170 11 157 1.15e-46 155
Msa0644030 MtrunA17_Chr1g0189361 48.734 158 68 3 13 170 12 156 1.35e-46 154
Msa0644030 MtrunA17_Chr2g0283131 39.526 253 104 7 7 252 5 215 1.63e-46 154
Msa0644030 MtrunA17_Chr3g0123821 35.573 253 115 6 8 252 9 221 5.65e-46 153
Msa0644030 MtrunA17_Chr2g0319951 46.951 164 74 2 7 170 5 155 1.88e-45 151
Msa0644030 MtrunA17_Chr1g0180291 40.083 242 102 6 12 252 11 210 2.47e-45 151
Msa0644030 MtrunA17_Chr4g0046261 38.340 253 107 7 7 252 5 215 2.57e-45 151
Msa0644030 MtrunA17_Chr4g0040781 49.390 164 70 3 7 170 5 155 2.90e-45 151
Msa0644030 MtrunA17_Chr8g0381841 46.203 158 72 3 13 170 15 159 6.88e-45 150
Msa0644030 MtrunA17_Chr8g0349711 36.948 249 105 6 14 252 5 211 1.42e-44 149
Msa0644030 MtrunA17_Chr7g0265001 38.843 242 106 5 12 252 13 213 3.24e-44 148
Msa0644030 MtrunA17_Chr7g0234201 36.667 240 114 6 14 252 12 214 1.53e-42 144
Msa0644030 MtrunA17_Chr3g0130271 46.875 160 72 3 11 169 8 155 1.60e-42 144
Msa0644030 MtrunA17_Chr8g0349681 36.179 246 115 4 9 252 378 583 2.13e-42 152
Msa0644030 MtrunA17_Chr8g0349681 36.752 234 102 5 12 241 172 363 3.43e-38 140
Msa0644030 MtrunA17_Chr8g0349681 44.586 157 74 2 14 170 12 155 9.03e-37 136
Msa0644030 MtrunA17_Chr8g0384311 45.455 165 76 4 6 169 4 155 2.24e-42 143
Msa0644030 MtrunA17_Chr1g0197331 35.827 254 118 6 1 252 1 211 2.40e-42 143
Msa0644030 MtrunA17_Chr1g0159481 39.184 245 102 10 11 252 13 213 2.95e-42 143
Msa0644030 MtrunA17_Chr2g0325091 37.200 250 105 7 11 252 7 212 6.88e-41 140
Msa0644030 MtrunA17_Chr1g0174281 34.902 255 108 6 13 253 13 223 9.46e-41 139
Msa0644030 MtrunA17_Chr8g0351861 45.570 158 73 2 13 170 14 158 2.36e-40 139
Msa0644030 MtrunA17_Chr8g0346421 43.671 158 76 2 13 170 24 168 2.40e-40 139
Msa0644030 MtrunA17_Chr7g0214241 34.286 245 116 7 14 252 14 219 8.86e-40 137
Msa0644030 MtrunA17_Chr7g0275991 40.854 164 84 2 7 170 12 162 3.99e-39 135
Msa0644030 MtrunA17_Chr7g0231131 42.405 158 78 2 13 170 13 157 4.21e-38 132
Msa0644030 MtrunA17_Chr6g0482721 38.235 204 86 4 13 216 10 173 6.74e-37 129
Msa0644030 MtrunA17_Chr8g0392931 37.600 250 102 7 13 252 12 217 1.86e-35 125
Msa0644030 MtrunA17_Chr8g0390561 33.469 245 113 6 8 252 2 196 9.86e-35 123
Msa0644030 MtrunA17_Chr1g0199331 36.275 204 89 4 16 218 32 195 1.62e-34 122
Msa0644030 MtrunA17_Chr3g0109721 32.203 236 112 5 17 252 12 199 1.89e-33 120
Msa0644030 MtrunA17_Chr8g0382221 40.000 155 78 3 17 170 11 151 2.53e-32 117
Msa0644030 MtrunA17_Chr5g0433561 30.932 236 115 5 17 252 12 199 6.12e-32 116
Msa0644030 MtrunA17_Chr5g0400131 30.645 248 127 5 5 252 3 205 7.62e-31 113
Msa0644030 MtrunA17_Chr3g0123971 39.355 155 79 3 17 170 11 151 1.83e-30 112
Msa0644030 MtrunA17_Chr4g0055081 36.747 166 86 4 5 169 3 150 3.40e-29 109
Msa0644030 MtrunA17_Chr4g0034871 32.794 247 111 9 5 241 2 203 7.14e-29 108
Msa0644030 MtrunA17_Chr8g0383261 30.544 239 121 5 15 251 12 207 2.68e-26 102
Msa0644030 MtrunA17_Chr6g0466301 32.178 202 100 4 15 214 8 174 2.81e-26 101
Msa0644030 MtrunA17_Chr6g0465491 32.178 202 100 4 15 214 8 174 2.81e-26 101
Msa0644030 MtrunA17_Chr2g0331691 31.429 245 114 8 15 252 10 207 1.02e-25 100
Msa0644030 MtrunA17_Chr4g0004661 31.837 245 113 8 15 252 64 261 1.08e-25 101
Msa0644030 MtrunA17_Chr1g0201121 29.870 231 123 4 15 241 8 203 2.54e-25 99.4
Msa0644030 MtrunA17_Chr4g0046211 31.111 135 80 3 15 149 6 127 1.54e-18 79.7
Msa0644030 MtrunA17_Chr4g0037021 28.922 204 115 5 15 218 6 179 2.39e-18 80.5
Msa0644030 MtrunA17_Chr2g0325101 28.718 195 109 5 15 209 6 170 4.16e-18 79.7
Msa0644030 MtrunA17_Chr8g0371501 30.000 150 85 4 15 157 6 142 9.78e-18 79.0
Msa0644030 MtrunA17_Chr3g0117931 28.090 178 98 5 15 175 8 172 1.16e-17 79.0
Msa0644030 MtrunA17_Chr5g0405791 30.000 150 85 4 15 157 6 142 1.79e-17 78.2
Msa0644030 MtrunA17_Chr6g0466161 31.000 200 101 5 32 229 7 171 1.90e-17 78.2
Msa0644030 MtrunA17_Chr1g0178291 37.107 159 78 4 18 174 431 569 2.42e-17 81.3
Msa0644030 MtrunA17_Chr6g0465471 31.892 185 89 5 32 214 7 156 6.36e-17 77.0
Msa0644030 MtrunA17_Chr6g0486041 29.744 195 107 7 15 209 6 170 1.34e-16 75.9
Msa0644030 MtrunA17_Chr3g0138121 25.472 212 114 7 5 216 4 171 6.62e-15 71.6
Msa0644030 MtrunA17_Chr3g0138111 25.472 212 114 7 5 216 4 171 8.34e-15 71.2
Msa0644030 MtrunA17_Chr3g0138101 25.472 212 114 7 5 216 4 171 8.42e-15 71.2
Msa0644030 MtrunA17_Chr6g0466431 35.165 91 50 1 15 105 8 89 8.09e-14 65.9
Msa0644030 MtrunA17_Chr6g0465611 35.165 91 50 1 15 105 8 89 8.09e-14 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644030 AT5G59840.1 78.279 244 13 4 11 253 11 215 1.40e-129 365
Msa0644030 AT3G46060.2 77.869 244 14 4 11 253 11 215 2.14e-129 365
Msa0644030 AT3G46060.3 77.869 244 14 4 11 253 11 215 2.14e-129 365
Msa0644030 AT3G46060.1 77.869 244 14 4 11 253 11 215 2.14e-129 365
Msa0644030 AT3G53610.2 77.049 244 16 4 11 253 11 215 3.57e-127 359
Msa0644030 AT3G53610.3 77.049 244 16 4 11 253 11 215 3.57e-127 359
Msa0644030 AT3G53610.1 77.049 244 16 4 11 253 11 215 3.57e-127 359
Msa0644030 AT5G03520.1 72.222 252 31 3 1 252 1 213 5.65e-117 333
Msa0644030 AT3G09900.1 70.866 254 33 4 1 252 1 215 1.74e-113 325
Msa0644030 AT5G03520.2 67.980 203 26 3 50 252 40 203 4.77e-90 265
Msa0644030 AT1G02130.1 52.653 245 66 7 11 252 4 201 2.10e-77 233
Msa0644030 AT5G47200.1 50.410 244 72 7 11 252 4 200 1.43e-70 215
Msa0644030 AT4G17530.1 50.000 244 73 7 11 252 4 200 2.88e-70 214
Msa0644030 AT3G11730.1 48.387 248 76 7 11 253 4 204 1.78e-68 210
Msa0644030 AT4G35860.1 41.365 249 99 6 12 253 3 211 9.02e-54 173
Msa0644030 AT4G17160.1 39.754 244 104 5 12 253 3 205 1.26e-51 167
Msa0644030 AT4G17170.1 39.759 249 103 5 12 253 3 211 2.84e-51 166
Msa0644030 AT5G59150.1 48.171 164 72 3 7 170 4 154 2.05e-48 159
Msa0644030 AT1G16920.1 49.390 164 70 3 7 170 5 155 1.02e-47 157
Msa0644030 AT3G46830.1 48.171 164 72 3 7 170 4 154 1.34e-47 157
Msa0644030 AT3G46830.2 48.171 164 72 3 7 170 4 154 1.34e-47 157
Msa0644030 AT1G09630.1 39.044 251 107 6 7 251 4 214 1.42e-47 157
Msa0644030 AT1G07410.1 46.951 164 74 3 7 170 4 154 5.63e-47 155
Msa0644030 AT4G18430.1 37.849 251 111 6 7 252 5 215 3.46e-46 154
Msa0644030 AT4G39990.1 37.247 247 108 6 13 252 15 221 1.02e-45 152
Msa0644030 AT3G15060.1 48.780 164 71 3 7 170 5 155 9.58e-45 150
Msa0644030 AT5G60860.1 38.340 253 107 7 7 252 5 215 1.64e-44 149
Msa0644030 AT1G06400.1 46.341 164 75 2 7 170 5 155 2.23e-44 149
Msa0644030 AT3G07410.1 37.959 245 108 7 13 252 10 215 4.33e-44 148
Msa0644030 AT1G28550.1 48.171 164 72 3 7 170 5 155 6.23e-44 148
Msa0644030 AT5G47520.1 48.101 158 69 3 13 170 12 156 6.56e-44 148
Msa0644030 AT5G45750.1 46.951 164 74 3 7 170 5 155 7.06e-44 148
Msa0644030 AT1G05810.1 46.203 158 72 3 13 170 10 154 8.79e-44 147
Msa0644030 AT4G18800.1 47.561 164 73 3 7 170 5 155 8.93e-44 147
Msa0644030 AT1G05810.2 46.203 158 72 3 13 170 56 200 1.81e-43 148
Msa0644030 AT2G33870.1 38.431 255 107 8 7 253 5 217 7.02e-43 145
Msa0644030 AT2G31680.1 45.570 158 73 3 13 170 10 154 9.15e-43 145
Msa0644030 AT5G47960.1 46.203 158 72 2 13 170 13 157 1.13e-42 145
Msa0644030 AT2G43130.1 45.570 158 73 3 13 170 10 154 1.41e-42 144
Msa0644030 AT1G01200.1 40.385 208 85 4 13 220 26 194 2.78e-42 144
Msa0644030 AT5G65270.1 43.671 158 76 3 13 170 15 159 3.88e-42 144
Msa0644030 AT1G43890.3 41.463 205 79 6 6 209 4 168 1.69e-41 141
Msa0644030 AT1G43890.1 41.463 205 79 6 6 209 4 168 1.69e-41 141
Msa0644030 AT1G43890.2 41.463 205 79 6 6 209 4 168 1.69e-41 141
Msa0644030 AT5G03530.2 37.805 246 110 6 8 252 6 209 2.76e-41 141
Msa0644030 AT5G03530.1 37.805 246 110 6 8 252 6 209 2.76e-41 141
Msa0644030 AT3G12160.1 33.871 248 117 4 13 253 13 220 4.16e-41 140
Msa0644030 AT1G18200.1 40.385 208 84 4 13 220 11 178 4.76e-39 135
Msa0644030 AT1G73640.1 38.326 227 96 5 13 235 11 197 6.49e-39 135
Msa0644030 AT3G54840.2 43.787 169 78 5 3 170 24 176 3.28e-38 132
Msa0644030 AT3G54840.1 43.787 169 78 5 3 170 24 176 3.91e-38 132
Msa0644030 AT3G54840.3 44.805 154 71 4 18 170 2 142 5.95e-37 128
Msa0644030 AT3G09910.5 38.696 230 100 7 8 236 6 195 5.04e-36 127
Msa0644030 AT3G09910.4 38.696 230 100 7 8 236 6 195 5.04e-36 127
Msa0644030 AT3G09910.3 43.684 190 83 7 8 186 6 182 4.00e-35 125
Msa0644030 AT3G09910.1 43.684 190 83 7 8 186 6 182 4.00e-35 125
Msa0644030 AT3G09910.2 43.684 190 83 7 8 186 6 182 4.00e-35 125
Msa0644030 AT4G35860.2 38.235 204 79 6 57 253 2 165 4.75e-34 121
Msa0644030 AT4G19640.1 33.333 237 110 7 17 253 12 200 1.29e-32 118
Msa0644030 AT5G45130.1 30.802 237 116 5 17 253 12 200 3.30e-32 117
Msa0644030 AT2G22290.1 31.356 236 121 5 17 252 11 205 8.27e-32 116
Msa0644030 AT4G39890.1 34.848 198 88 5 17 213 11 168 1.06e-30 114
Msa0644030 AT5G45130.2 30.638 235 115 5 19 253 22 208 1.48e-30 113
Msa0644030 AT5G10260.1 30.802 237 123 5 17 253 11 206 1.56e-30 113
Msa0644030 AT3G18820.1 33.603 247 109 9 5 241 2 203 5.22e-30 112
Msa0644030 AT5G59150.2 47.368 114 47 3 57 170 3 103 4.56e-29 108
Msa0644030 AT2G44610.1 36.145 166 89 3 5 170 3 151 4.24e-28 107
Msa0644030 AT5G64990.1 37.662 154 83 2 17 170 9 149 2.71e-27 104
Msa0644030 AT1G49300.2 37.288 177 87 6 5 174 2 161 3.04e-27 104
Msa0644030 AT1G49300.1 37.288 177 87 6 5 174 2 161 3.04e-27 104
Msa0644030 AT1G52280.1 39.264 163 79 5 15 170 8 157 5.56e-27 103
Msa0644030 AT1G22740.1 33.184 223 104 6 15 231 8 191 2.63e-26 102
Msa0644030 AT2G21880.1 31.000 200 105 4 15 214 9 175 6.73e-26 101
Msa0644030 AT4G19640.2 36.090 133 73 1 17 149 12 132 1.27e-25 98.6
Msa0644030 AT4G09720.4 35.294 204 96 5 15 214 8 179 1.30e-25 100
Msa0644030 AT4G09720.1 32.178 202 100 3 15 214 8 174 2.01e-25 99.8
Msa0644030 AT3G16100.1 38.037 163 81 4 15 170 8 157 2.58e-25 99.8
Msa0644030 AT4G19640.3 36.090 133 73 1 17 149 12 132 6.30e-25 98.2
Msa0644030 AT4G09720.3 34.146 205 103 4 15 214 8 185 8.92e-25 98.6
Msa0644030 AT5G64990.2 36.025 161 83 3 17 170 9 156 1.39e-24 97.8
Msa0644030 AT5G39620.1 30.882 204 98 4 16 214 6 171 1.07e-23 95.1
Msa0644030 AT4G35020.1 30.256 195 106 5 15 209 6 170 8.29e-20 84.7
Msa0644030 AT4G35020.2 30.256 195 106 5 15 209 6 170 8.29e-20 84.7
Msa0644030 AT4G35020.3 30.256 195 106 5 15 209 6 170 8.29e-20 84.7
Msa0644030 AT5G62880.1 28.502 207 118 5 15 221 8 184 4.54e-19 83.2
Msa0644030 AT3G48040.2 28.022 182 104 5 15 182 8 176 6.16e-19 82.0
Msa0644030 AT5G45970.1 28.718 195 109 5 15 209 6 170 1.72e-18 81.3
Msa0644030 AT3G48040.1 28.834 163 94 4 15 168 8 157 3.59e-18 80.5
Msa0644030 AT2G21880.4 29.714 175 90 4 40 214 9 150 4.58e-18 79.7
Msa0644030 AT2G21880.3 29.714 175 90 4 40 214 9 150 4.58e-18 79.7
Msa0644030 AT2G17800.2 29.213 178 96 6 15 175 6 170 7.51e-18 79.3
Msa0644030 AT2G17800.1 29.213 178 96 6 15 175 6 170 7.51e-18 79.3
Msa0644030 AT3G51300.1 28.931 159 91 5 15 164 6 151 1.24e-17 79.0
Msa0644030 AT4G35950.1 29.213 178 96 6 15 175 6 170 1.61e-17 78.6
Msa0644030 AT1G75840.1 29.801 151 86 4 15 158 6 143 1.75e-17 78.6
Msa0644030 AT2G44690.1 28.302 159 92 4 15 164 18 163 2.37e-17 78.6
Msa0644030 AT5G62880.2 30.189 159 90 4 15 173 8 145 2.38e-17 78.2
Msa0644030 AT1G20090.1 29.801 151 86 4 15 158 5 142 2.58e-17 78.2
Msa0644030 AT4G09720.6 31.214 173 82 3 44 214 3 140 1.41e-16 75.5
Msa0644030 AT4G09720.5 31.214 173 82 3 44 214 3 140 1.41e-16 75.5
Msa0644030 AT4G09720.2 31.214 173 82 3 44 214 3 140 1.41e-16 75.5
Msa0644030 AT2G21880.2 27.000 200 105 5 15 214 9 167 2.53e-16 75.5
Msa0644030 AT4G28950.1 30.573 157 89 6 15 164 6 149 3.73e-16 75.1
Msa0644030 AT4G35020.4 33.071 127 72 3 15 141 6 119 8.81e-16 72.8
Msa0644030 AT4G35020.5 33.071 127 72 3 15 141 6 119 8.81e-16 72.8
Msa0644030 AT5G55080.1 25.871 201 106 6 16 216 14 171 1.26e-13 68.6

Find 78 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATAGTATACCACAATTAT+AGG 0.240680 4_3:-47542491 Msa0644030:five_prime_UTR
AACGTATCAAGCTCCAAATT+TGG 0.259101 4_3:-47539681 Msa0644030:CDS
ACCAGTTTCATCACAACTAT+TGG 0.260192 4_3:-47539826 Msa0644030:CDS
GTCCTGCAGTATCCCAAATT+TGG 0.278971 4_3:+47539668 None:intergenic
ATCAGCCAGTGCTTGGCCTT+TGG 0.327266 4_3:+47538616 None:intergenic
TCTAACTACCTCTGTTTGAT+TGG 0.332170 4_3:-47537159 Msa0644030:three_prime_UTR
CAAGACTCTGCAACGGGGTC+TGG 0.345479 4_3:-47537395 Msa0644030:CDS
ACCTCTGTTTGATTGGGATT+AGG 0.371672 4_3:-47537152 Msa0644030:three_prime_UTR
ACGTATCAAGCTCCAAATTT+GGG 0.372566 4_3:-47539680 Msa0644030:CDS
ATAAGAACCATTGAACTTGA+TGG 0.385351 4_3:-47539706 Msa0644030:CDS
TTGTGCGTGATAAGTAGTTT+TGG 0.385858 4_3:-47537228 Msa0644030:three_prime_UTR
ATCAACCAAGACTCTGCAAC+GGG 0.391757 4_3:-47537401 Msa0644030:CDS
CCTTACCTGTTGTAATTGTC+CGG 0.397162 4_3:+47539635 None:intergenic
CCAGTTTCATCACAACTATT+GGG 0.400381 4_3:-47539825 Msa0644030:intron
TGGTGCCATGGGCATATTGC+TGG 0.408906 4_3:-47539261 Msa0644030:CDS
CAAGCACTGGCTGATGAGTA+TGG 0.410586 4_3:-47538608 Msa0644030:CDS
TGCGGCTGCAAGTCTGTATC+TGG 0.413956 4_3:-47542601 None:intergenic
CTTAATGAGGTAATCGTAAT+CGG 0.415779 4_3:+47540873 None:intergenic
AGTCTGTATCTGGCTTCATA+AGG 0.419229 4_3:-47542591 Msa0644030:five_prime_UTR
TAATCGGCACGAGCCCTTGC+CGG 0.419982 4_3:+47540889 None:intergenic
CTAACTACCTCTGTTTGATT+GGG 0.420571 4_3:-47537158 Msa0644030:three_prime_UTR
CTATGCGTTGATAGATGCTT+CGG 0.422562 4_3:-47537029 Msa0644030:three_prime_UTR
GGTAGGGAACAAAGCAGATA+TGG 0.426102 4_3:-47539024 Msa0644030:CDS
GGATAATGTTAACAAAATAC+TGG 0.430059 4_3:-47539045 Msa0644030:CDS
CTCATTAAGCTTCTCTTGAT+CGG 0.432261 4_3:-47540859 Msa0644030:CDS
GTCTGTATCTGGCTTCATAA+GGG 0.433509 4_3:-47542590 Msa0644030:five_prime_UTR
CCCAATAGTTGTGATGAAAC+TGG 0.436614 4_3:+47539825 None:intergenic
CAACATTGAGCAACATGCTT+CGG 0.444470 4_3:-47539066 Msa0644030:CDS
CAGATATGGACGAAAGCAAA+AGG 0.446902 4_3:-47539010 Msa0644030:CDS
ACGTTTGCCATCAAGTTCAA+TGG 0.447823 4_3:+47539699 None:intergenic
GATGGCTGCTCCACCGGCAA+GGG 0.449585 4_3:-47540902 Msa0644030:CDS
CTCTGCAACGGGGTCTGGAC+AGG 0.453418 4_3:-47537390 Msa0644030:CDS
CTGCAGGACAGGAACGGTTC+CGG 0.459289 4_3:-47539654 Msa0644030:CDS
AGCTTACTATCGTGGTGCCA+TGG 0.468786 4_3:-47539273 Msa0644030:CDS
TGATGGCTGCTCCACCGGCA+AGG 0.468923 4_3:-47540903 Msa0644030:CDS
CAGACCCCGTTGCAGAGTCT+TGG 0.475391 4_3:+47537396 None:intergenic
AACAGTAATGTTCCTTTCTG+TGG 0.484279 4_3:-47539209 Msa0644030:CDS
AAATCTGCTTGCTGTGGTTG+AGG 0.490381 4_3:-47537359 Msa0644030:exon
TGTATAAACTTGCTTATCAA+TGG 0.490968 4_3:-47537110 Msa0644030:three_prime_UTR
GCTTACTATCGTGGTGCCAT+GGG 0.506910 4_3:-47539272 Msa0644030:CDS
AACGTCCAAAGGCCAAGCAC+TGG 0.513872 4_3:-47538621 Msa0644030:CDS
AACGCATAGTTAGTAGCTTG+TGG 0.522675 4_3:+47536972 None:intergenic
CGGTTCCGGACAATTACAAC+AGG 0.522865 4_3:-47539640 Msa0644030:intron
AATGTTAACAAAATACTGGT+AGG 0.531919 4_3:-47539041 Msa0644030:CDS
AGTGCTTGGCCTTTGGACGT+TGG 0.532422 4_3:+47538623 None:intergenic
ACGCATAGTTAGTAGCTTGT+GGG 0.533460 4_3:+47536973 None:intergenic
CATACTCATCAGCCAGTGCT+TGG 0.535062 4_3:+47538609 None:intergenic
GGCATTCACTTGCGCATATG+CGG 0.545602 4_3:-47542557 Msa0644030:five_prime_UTR
CTTCTCTTGATCGGCGATAG+CGG 0.545946 4_3:-47540850 Msa0644030:intron
TAGGCTGTGCCAACGTCCAA+AGG 0.547979 4_3:-47538632 Msa0644030:CDS
AAATTCTTCGAAACTGTAAG+TGG 0.558518 4_3:-47538581 Msa0644030:CDS
CTGTATCTGGCTTCATAAGG+GGG 0.563934 4_3:-47542588 Msa0644030:five_prime_UTR
AATTTGGGATACTGCAGGAC+AGG 0.565679 4_3:-47539665 Msa0644030:CDS
CTCCAAATTTGGGATACTGC+AGG 0.565715 4_3:-47539670 Msa0644030:CDS
CAGCTTCAAAGTACAGTACA+AGG 0.570658 4_3:-47542463 Msa0644030:intron
TTCAAACTAAAGCCACAGAA+AGG 0.577022 4_3:+47539197 None:intergenic
TCGGCACGAGCCCTTGCCGG+TGG 0.580971 4_3:+47540892 None:intergenic
CTGTTTGATTGGGATTAGGA+CGG 0.583469 4_3:-47537148 Msa0644030:three_prime_UTR
TCTGTATCTGGCTTCATAAG+GGG 0.588024 4_3:-47542589 Msa0644030:five_prime_UTR
AGATATGGACGAAAGCAAAA+GGG 0.588273 4_3:-47539009 Msa0644030:intron
GCTTGCTGACACTGACAACA+AGG 0.590249 4_3:-47538420 Msa0644030:CDS
TGCAAAGACAAATCTAAATG+TGG 0.596571 4_3:-47538483 Msa0644030:CDS
AGCTGCCTCTCCTATAATTG+TGG 0.596941 4_3:+47542481 None:intergenic
ATGTTAACAAAATACTGGTA+GGG 0.601571 4_3:-47539040 Msa0644030:CDS
GGGATACTGCAGGACAGGAA+CGG 0.617575 4_3:-47539660 Msa0644030:CDS
CGATCAAGAGAAGCTTAATG+AGG 0.624299 4_3:+47540860 None:intergenic
AAAGACAAATCTAAATGTGG+AGG 0.631704 4_3:-47538480 Msa0644030:CDS
AATCAACCAAGACTCTGCAA+CGG 0.636226 4_3:-47537402 Msa0644030:CDS
TGTGATGAAACTGGTAGTGA+AGG 0.645460 4_3:+47539834 None:intergenic
ATTCACTTGCGCATATGCGG+AGG 0.646954 4_3:-47542554 Msa0644030:five_prime_UTR
TAGCTAGAGACATAAAACAA+AGG 0.656013 4_3:-47538442 Msa0644030:CDS
TGACACTGACAACAAGGCAG+AGG 0.656933 4_3:-47538414 Msa0644030:intron
GTATACCACAATTATAGGAG+AGG 0.660299 4_3:-47542486 Msa0644030:five_prime_UTR
ATAGACCAGCAATATGCCCA+TGG 0.666814 4_3:+47539256 None:intergenic
TGCTTATCAATGGTGTGTAG+TGG 0.671056 4_3:-47537100 Msa0644030:three_prime_UTR
TGTATCTGGCTTCATAAGGG+GGG 0.679081 4_3:-47542587 Msa0644030:five_prime_UTR
TCCTAATCCCAATCAAACAG+AGG 0.688148 4_3:+47537151 None:intergenic
TCAACCAAGACTCTGCAACG+GGG 0.752690 4_3:-47537400 Msa0644030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAAATAAAAAACATGA+AGG + chr4_3:47537372-47537391 None:intergenic 10.0%
!!! TTCATGTTTTTTATTTTAAA+TGG - chr4_3:47537371-47537390 Msa0644030:CDS 10.0%
!!! TGAATTTTTTTTATTCAATA+TGG - chr4_3:47537616-47537635 Msa0644030:intron 10.0%
!!! ATAAAATAGATTTTTTTTAG+AGG - chr4_3:47538179-47538198 Msa0644030:intron 10.0%
!! ACAAAATAAGTTTATATTAA+TGG + chr4_3:47539662-47539681 None:intergenic 10.0%
!!! TTAATTGATTTTGAAATTAA+AGG + chr4_3:47541421-47541440 None:intergenic 10.0%
!! TTAATTTCAAAATCAATTAA+TGG - chr4_3:47541421-47541440 Msa0644030:intron 10.0%
!!! AGTATCTTTTATATATATAT+GGG + chr4_3:47542034-47542053 None:intergenic 10.0%
!!! TAGTATCTTTTATATATATA+TGG + chr4_3:47542035-47542054 None:intergenic 10.0%
!! AATATATTATTGCTAACAAA+TGG + chr4_3:47537586-47537605 None:intergenic 15.0%
!!! TTCATGTTCTTTATTTTAAA+TGG + chr4_3:47537650-47537669 None:intergenic 15.0%
!!! TTTTAAAAATCTGTAACAAA+CGG + chr4_3:47538095-47538114 None:intergenic 15.0%
!! AAAAAAAAGGATGAAATTAA+GGG + chr4_3:47538425-47538444 None:intergenic 15.0%
!! TAAAAAAAAGGATGAAATTA+AGG + chr4_3:47538426-47538445 None:intergenic 15.0%
!! ACCATATAATAATATAAACT+AGG - chr4_3:47538778-47538797 Msa0644030:intron 15.0%
!! CCATATAATAATATAAACTA+GGG - chr4_3:47538779-47538798 Msa0644030:intron 15.0%
!!! TAATGATTAATGATAGATTT+TGG - chr4_3:47538824-47538843 Msa0644030:intron 15.0%
!! TGTTATTGTAATGTAAATTA+TGG - chr4_3:47538937-47538956 Msa0644030:intron 15.0%
!! GTATTAAACAAATAAATTGT+GGG + chr4_3:47539164-47539183 None:intergenic 15.0%
!! TGTATTAAACAAATAAATTG+TGG + chr4_3:47539165-47539184 None:intergenic 15.0%
!! ATTACACAAAATATATATAG+AGG - chr4_3:47541344-47541363 Msa0644030:intron 15.0%
!! ATTGAATAATAGTAATTGTT+AGG - chr4_3:47541449-47541468 Msa0644030:intron 15.0%
!! TTGAATAATAGTAATTGTTA+GGG - chr4_3:47541450-47541469 Msa0644030:intron 15.0%
!! AAAGAAAAGAATGAAATTAT+TGG + chr4_3:47541665-47541684 None:intergenic 15.0%
!!! AATAATTTCATTCTTTTCTT+TGG - chr4_3:47541664-47541683 Msa0644030:intron 15.0%
!! ATTCAAATTATTAATTCCAT+TGG + chr4_3:47541755-47541774 None:intergenic 15.0%
!!! GTATCTTTTATATATATATG+GGG + chr4_3:47542033-47542052 None:intergenic 15.0%
!! TTATAGTATACCACAATTAT+AGG - chr4_3:47537082-47537101 Msa0644030:three_prime_UTR 20.0%
!!! TATCAATTTTTTTGGTGATA+GGG + chr4_3:47537828-47537847 None:intergenic 20.0%
!!! ATATCAATTTTTTTGGTGAT+AGG + chr4_3:47537196-47537215 None:intergenic 20.0%
!!! TAACAATAATTTTCAACTAG+GGG + chr4_3:47537224-47537243 None:intergenic 20.0%
!!! GTAACAATAATTTTCAACTA+GGG + chr4_3:47537225-47537244 None:intergenic 20.0%
!!! TGTAACAATAATTTTCAACT+AGG + chr4_3:47537226-47537245 None:intergenic 20.0%
!!! ATTTTTTTATGTGCTTCATT+TGG + chr4_3:47537446-47537465 None:intergenic 20.0%
!!! TTTTTTTATTCAATATGGCA+TGG - chr4_3:47537621-47537640 Msa0644030:intron 20.0%
!!! TGCAACAATAATTTTTAACT+AGG - chr4_3:47537797-47537816 Msa0644030:intron 20.0%
!!! GCAACAATAATTTTTAACTA+GGG - chr4_3:47537798-47537817 Msa0644030:intron 20.0%
!!! CAACAATAATTTTTAACTAG+GGG - chr4_3:47537799-47537818 Msa0644030:intron 20.0%
!!! TATCAATTTTTTTGGTGATA+GGG - chr4_3:47537828-47537847 Msa0644030:intron 20.0%
!! TTATAGTATACCACAATTAT+AGG - chr4_3:47537082-47537101 Msa0644030:three_prime_UTR 20.0%
!! TTAAAAAAGCTATAACAAAC+GGG + chr4_3:47538021-47538040 None:intergenic 20.0%
!! CTTAAAAAAGCTATAACAAA+CGG + chr4_3:47538022-47538041 None:intergenic 20.0%
!! TTGGATACAACTATATAAAA+GGG + chr4_3:47538254-47538273 None:intergenic 20.0%
!! TTTGGATACAACTATATAAA+AGG + chr4_3:47538255-47538274 None:intergenic 20.0%
!!! AACAAATAATCTAGTTTGTT+TGG + chr4_3:47538273-47538292 None:intergenic 20.0%
!!! TTATTTTAATCCGTAACAAA+CGG - chr4_3:47538398-47538417 Msa0644030:intron 20.0%
!!! ATTTTAGAGAGAGAAAATAA+CGG + chr4_3:47538499-47538518 None:intergenic 20.0%
!! ATTATATGGTAGAAAATACA+TGG + chr4_3:47538768-47538787 None:intergenic 20.0%
!! CCCTAGTTTATATTATTATA+TGG + chr4_3:47538782-47538801 None:intergenic 20.0%
!!! GATTTGTTTTAAATTGTGAA+AGG - chr4_3:47538864-47538883 Msa0644030:intron 20.0%
!! CAAACAATGATTCAAATAAT+GGG + chr4_3:47538917-47538936 None:intergenic 20.0%
!! ACAAACAATGATTCAAATAA+TGG + chr4_3:47538918-47538937 None:intergenic 20.0%
!! TTTGTCATTGTCAATAATTT+GGG + chr4_3:47539051-47539070 None:intergenic 20.0%
!! ATTTGTTTAATACACAAAGT+AGG - chr4_3:47539171-47539190 Msa0644030:intron 20.0%
!! TTAAAATCAATACTGCATTA+AGG + chr4_3:47539846-47539865 None:intergenic 20.0%
!!! GTATATGTGTTTTAAAAAGA+TGG + chr4_3:47540106-47540125 None:intergenic 20.0%
!!! CTGCAAAAAACAAATATTTT+AGG + chr4_3:47540282-47540301 None:intergenic 20.0%
!!! ATTTGTTATTTATCAACTGT+TGG + chr4_3:47540839-47540858 None:intergenic 20.0%
!! TTCAAAATCAATTAATGGTT+AGG - chr4_3:47541426-47541445 Msa0644030:intron 20.0%
!!! AAATTGATTTTGTCATGATA+AGG + chr4_3:47541531-47541550 None:intergenic 20.0%
!! TGAAATTATTGGAATCTAAA+TGG + chr4_3:47541654-47541673 None:intergenic 20.0%
!! TATACTATGATAATAAGATC+TGG - chr4_3:47541785-47541804 Msa0644030:intron 20.0%
!!! TAAATAAACTTTAAAGCTGT+TGG - chr4_3:47541938-47541957 Msa0644030:intron 20.0%
!! TGTTGGATTAAAAATAATTG+AGG - chr4_3:47541955-47541974 Msa0644030:intron 20.0%
!! GTTGGATTAAAAATAATTGA+GGG - chr4_3:47541956-47541975 Msa0644030:intron 20.0%
!! GTTTATACAGTGAAAAAAAT+GGG + chr4_3:47542452-47542471 None:intergenic 20.0%
!! AGTTTATACAGTGAAAAAAA+TGG + chr4_3:47542453-47542472 None:intergenic 20.0%
!!! ATCAATTTTTTTGGTGATAG+GGG + chr4_3:47537829-47537848 None:intergenic 25.0%
!!! ACTAGCCATTTTAGATTAAA+TGG - chr4_3:47537397-47537416 Msa0644030:CDS 25.0%
! TCATTTGGATTCTCATAATA+TGG + chr4_3:47537431-47537450 None:intergenic 25.0%
!!! GTATCAATTTTTTTGGTGAT+AGG - chr4_3:47537827-47537846 Msa0644030:intron 25.0%
!!! ATCAATTTTTTTGGTGATAG+GGG - chr4_3:47537829-47537848 Msa0644030:intron 25.0%
!!! TATTTTAATCCGTAACAAAC+GGG - chr4_3:47538399-47538418 Msa0644030:intron 25.0%
!! TCCTTTACTTGTGAAAATTT+TGG - chr4_3:47538527-47538546 Msa0644030:CDS 25.0%
!! TCCAAAATTTTCACAAGTAA+AGG + chr4_3:47538531-47538550 None:intergenic 25.0%
!! TTTACTTGTGAAAATTTTGG+AGG - chr4_3:47538530-47538549 Msa0644030:CDS 25.0%
!!! TTTTGGCTTTGTTTTTGATT+TGG - chr4_3:47538841-47538860 Msa0644030:intron 25.0%
!!! TTTGGCTTTGTTTTTGATTT+GGG - chr4_3:47538842-47538861 Msa0644030:intron 25.0%
! ATGTAAATTATGGTATCAAG+AGG - chr4_3:47538947-47538966 Msa0644030:intron 25.0%
! ATTACTGCAATTGTAATGAA+CGG + chr4_3:47539028-47539047 None:intergenic 25.0%
! CTTTGTCATTGTCAATAATT+TGG + chr4_3:47539052-47539071 None:intergenic 25.0%
! AAACTTATAAGCTAAGAGAA+TGG + chr4_3:47539113-47539132 None:intergenic 25.0%
! ATACTTCATTATGTAAACCA+AGG + chr4_3:47539583-47539602 None:intergenic 25.0%
!!! ATTTTGTTATTGTTCTTCAC+AGG - chr4_3:47539675-47539694 Msa0644030:CDS 25.0%
!! AACTATTGGGTATGATTTTA+TGG - chr4_3:47539761-47539780 Msa0644030:intron 25.0%
! TGTACATTCTTAATATTCGT+TGG - chr4_3:47540129-47540148 Msa0644030:intron 25.0%
!!! ATTTTTTTCTTCCTTTCCAT+GGG - chr4_3:47540436-47540455 Msa0644030:intron 25.0%
! TTCTAATGATTTCAGATATC+AGG - chr4_3:47540473-47540492 Msa0644030:intron 25.0%
! GGATAATGTTAACAAAATAC+TGG - chr4_3:47540528-47540547 Msa0644030:intron 25.0%
! AATGTTAACAAAATACTGGT+AGG - chr4_3:47540532-47540551 Msa0644030:intron 25.0%
! ATGTTAACAAAATACTGGTA+GGG - chr4_3:47540533-47540552 Msa0644030:intron 25.0%
!! TAAACATTTTTGTTGACGAA+CGG - chr4_3:47540779-47540798 Msa0644030:intron 25.0%
!! GTACTTTTACCTTTCTTTTT+AGG - chr4_3:47540922-47540941 Msa0644030:exon 25.0%
! ATACAGAGTCGATATTATAT+AGG - chr4_3:47541303-47541322 Msa0644030:intron 25.0%
! ACACAAAATATATATAGAGG+AGG - chr4_3:47541347-47541366 Msa0644030:intron 25.0%
! CACAAAATATATATAGAGGA+GGG - chr4_3:47541348-47541367 Msa0644030:intron 25.0%
! TAAGTTTATAGACTTACTCT+TGG + chr4_3:47541385-47541404 None:intergenic 25.0%
! TGAAATTAAAGGTCATGATT+TGG + chr4_3:47541410-47541429 None:intergenic 25.0%
!! CTTTTATATATATATGGGGA+GGG + chr4_3:47542029-47542048 None:intergenic 25.0%
!! TCTTTTATATATATATGGGG+AGG + chr4_3:47542030-47542049 None:intergenic 25.0%
! AATATCGTATCGTGTAAATA+AGG + chr4_3:47542059-47542078 None:intergenic 25.0%
!!! AAAAGGTATCACAAAACATT+AGG + chr4_3:47542130-47542149 None:intergenic 25.0%
!! TGTATAAACTTGCTTATCAA+TGG - chr4_3:47542463-47542482 Msa0644030:intron 25.0%
!!! GGCAGACATATCAATTTTTT+TGG + chr4_3:47537203-47537222 None:intergenic 30.0%
CTTAAGTTTGACAAATTGCA+TGG - chr4_3:47537483-47537502 Msa0644030:intron 30.0%
GTAATATCACTAAGTGGTAT+TGG + chr4_3:47537564-47537583 None:intergenic 30.0%
CAAATGGTAATATCACTAAG+TGG + chr4_3:47537570-47537589 None:intergenic 30.0%
! TTTTCACAAGTAAAGGAACA+TGG + chr4_3:47538524-47538543 None:intergenic 30.0%
! GATTCATTTCTTCGTTTTGA+TGG - chr4_3:47538653-47538672 Msa0644030:intron 30.0%
CTTAATGAGGTAATCGTAAT+CGG + chr4_3:47538703-47538722 None:intergenic 30.0%
ATGGTAGAAAATACATGGAA+GGG + chr4_3:47538763-47538782 None:intergenic 30.0%
TATGGTAGAAAATACATGGA+AGG + chr4_3:47538764-47538783 None:intergenic 30.0%
! TGAAAGGTTTGATCTTTTCA+TGG - chr4_3:47538880-47538899 Msa0644030:intron 30.0%
TAATGAACGGATCACATAAA+AGG + chr4_3:47539015-47539034 None:intergenic 30.0%
GTAATTGAGATCAACTAAAG+GGG + chr4_3:47539310-47539329 None:intergenic 30.0%
GGTAATTGAGATCAACTAAA+GGG + chr4_3:47539311-47539330 None:intergenic 30.0%
AGGTAATTGAGATCAACTAA+AGG + chr4_3:47539312-47539331 None:intergenic 30.0%
ACCTTCTTGTGTAAAATACA+GGG - chr4_3:47539393-47539412 Msa0644030:intron 30.0%
TGTACAATACACTAATTGGT+GGG - chr4_3:47539424-47539443 Msa0644030:intron 30.0%
AGCAACACAGTTATTCAAAT+TGG + chr4_3:47539614-47539633 None:intergenic 30.0%
TGTGATATTAGAGAAATCTC+AGG + chr4_3:47539817-47539836 None:intergenic 30.0%
ATAAGAACCATTGAACTTGA+TGG - chr4_3:47539867-47539886 Msa0644030:CDS 30.0%
! ATCCTCATAGGTTTTCTTTT+TGG - chr4_3:47539967-47539986 Msa0644030:intron 30.0%
TTCCAAAAAGAAAACCTATG+AGG + chr4_3:47539972-47539991 None:intergenic 30.0%
ACTATTACTTCCGGATTTAA+TGG + chr4_3:47540080-47540099 None:intergenic 30.0%
AGATGGAAAACTATTACTTC+CGG + chr4_3:47540089-47540108 None:intergenic 30.0%
!!! GATTTTTTTCTTCCTTTCCA+TGG - chr4_3:47540435-47540454 Msa0644030:intron 30.0%
! ATCTGAAATCATTAGAAGCT+AGG + chr4_3:47540470-47540489 None:intergenic 30.0%
TGATTTCAGATATCAGGAAT+TGG - chr4_3:47540479-47540498 Msa0644030:intron 30.0%
! TGTAAAGGTTGATTTACAGA+GGG + chr4_3:47540662-47540681 None:intergenic 30.0%
AGTACATTTGACAACTGTAA+AGG + chr4_3:47540677-47540696 None:intergenic 30.0%
GTAAATTTGCATGACGATTA+TGG + chr4_3:47540701-47540720 None:intergenic 30.0%
TAATCGTCATGCAAATTTAC+TGG - chr4_3:47540701-47540720 Msa0644030:intron 30.0%
AAGGTTGAATTGCATTGTTA+AGG - chr4_3:47540724-47540743 Msa0644030:intron 30.0%
TTGCATTGTTAAGGATGTTT+AGG - chr4_3:47540733-47540752 Msa0644030:intron 30.0%
! AAACATTTTTGTTGACGAAC+GGG - chr4_3:47540780-47540799 Msa0644030:intron 30.0%
AAATTCTTCGAAACTGTAAG+TGG - chr4_3:47540992-47541011 Msa0644030:intron 30.0%
! GTGTATTTTACCTGAAAATG+TGG - chr4_3:47541014-47541033 Msa0644030:intron 30.0%
TGCAAAGACAAATCTAAATG+TGG - chr4_3:47541090-47541109 Msa0644030:intron 30.0%
AAAGACAAATCTAAATGTGG+AGG - chr4_3:47541093-47541112 Msa0644030:intron 30.0%
!! TTGTTTTATGTCTCTAGCTA+TGG + chr4_3:47541131-47541150 None:intergenic 30.0%
TAGCTAGAGACATAAAACAA+AGG - chr4_3:47541131-47541150 Msa0644030:intron 30.0%
TTAGAGACATGAAACTATGA+CGG + chr4_3:47541221-47541240 None:intergenic 30.0%
TAATAGTAATTGTTAGGGTG+AGG - chr4_3:47541455-47541474 Msa0644030:intron 30.0%
!!! GAAGTACATTTTGAGATCTA+TGG + chr4_3:47541618-47541637 None:intergenic 30.0%
GATCTCAAAATGTACTTCTT+TGG - chr4_3:47541620-47541639 Msa0644030:intron 30.0%
TTAGGTAATCCCAATTTAAG+AGG - chr4_3:47541702-47541721 Msa0644030:intron 30.0%
!!! TGATTTGTTTTTGTCGTTTG+CGG - chr4_3:47541856-47541875 Msa0644030:intron 30.0%
! ATTTTGTTGAGTGTGTTTAG+AGG - chr4_3:47541891-47541910 Msa0644030:intron 30.0%
GTATACCACAATTATAGGAG+AGG - chr4_3:47537087-47537106 Msa0644030:three_prime_UTR 35.0%
!! ATAACAAACGGGCTCTAAAA+AGG + chr4_3:47537160-47537179 None:intergenic 35.0%
CAGAAGAAGCTATAACAAAC+GGG + chr4_3:47537171-47537190 None:intergenic 35.0%
GCAGAAGAAGCTATAACAAA+CGG + chr4_3:47537172-47537191 None:intergenic 35.0%
GCCAACTTAAATGAAGAACA+GGG + chr4_3:47537253-47537272 None:intergenic 35.0%
GCTCGCCATTTAATCTAAAA+TGG + chr4_3:47537405-47537424 None:intergenic 35.0%
!! GTACTGCTCTACATTTTAGT+TGG + chr4_3:47537701-47537720 None:intergenic 35.0%
!! ACCATTTTTCAACATCTTGC+AGG + chr4_3:47537742-47537761 None:intergenic 35.0%
!!! GGCAGACGTATCAATTTTTT+TGG - chr4_3:47537820-47537839 Msa0644030:intron 35.0%
GTATACCACAATTATAGGAG+AGG - chr4_3:47537087-47537106 Msa0644030:three_prime_UTR 35.0%
!! ATAACAAACGGGCTCTAAAA+AGG + chr4_3:47537160-47537179 None:intergenic 35.0%
CTCATTAAGCTTCTCTTGAT+CGG - chr4_3:47538714-47538733 Msa0644030:intron 35.0%
TGGTAGAAAATACATGGAAG+GGG + chr4_3:47538762-47538781 None:intergenic 35.0%
TGGATCGAATTCTTACCAAA+TGG + chr4_3:47539236-47539255 None:intergenic 35.0%
ACTAGTAGTCTAGTACGTAT+AGG - chr4_3:47539258-47539277 Msa0644030:CDS 35.0%
CACCTTCTTGTGTAAAATAC+AGG - chr4_3:47539392-47539411 Msa0644030:intron 35.0%
! ACCCTGTATTTTACACAAGA+AGG + chr4_3:47539397-47539416 None:intergenic 35.0%
CTTGTGTAAAATACAGGGTA+AGG - chr4_3:47539398-47539417 Msa0644030:intron 35.0%
GCTGTGTACAATACACTAAT+TGG - chr4_3:47539420-47539439 Msa0644030:intron 35.0%
GTGTACAATACACTAATTGG+TGG - chr4_3:47539423-47539442 Msa0644030:intron 35.0%
GTAATTGAGATCACCTAAAG+GGG + chr4_3:47539511-47539530 None:intergenic 35.0%
GGTAATTGAGATCACCTAAA+GGG + chr4_3:47539512-47539531 None:intergenic 35.0%
AGGTAATTGAGATCACCTAA+AGG + chr4_3:47539513-47539532 None:intergenic 35.0%
! GCTTTTGTGTGAAACATACT+TGG - chr4_3:47539631-47539650 Msa0644030:intron 35.0%
TTATTGTTCTTCACAGGTGT+TGG - chr4_3:47539681-47539700 Msa0644030:CDS 35.0%
! CTTCTTTTGCGTTTTTCTGA+TGG - chr4_3:47539714-47539733 Msa0644030:CDS 35.0%
ACCAGTTTCATCACAACTAT+TGG - chr4_3:47539747-47539766 Msa0644030:intron 35.0%
CCAGTTTCATCACAACTATT+GGG - chr4_3:47539748-47539767 Msa0644030:intron 35.0%
AACGTATCAAGCTCCAAATT+TGG - chr4_3:47539892-47539911 Msa0644030:intron 35.0%
ACGTATCAAGCTCCAAATTT+GGG - chr4_3:47539893-47539912 Msa0644030:intron 35.0%
GTAAGGTTTATGATCCTCAT+AGG - chr4_3:47539955-47539974 Msa0644030:intron 35.0%
AAATGCTTGTTCCAACGAAT+TGG - chr4_3:47539991-47540010 Msa0644030:intron 35.0%
CATGTGTTTGTGAAAATGGA+TGG + chr4_3:47540047-47540066 None:intergenic 35.0%
! CATCCATTTTCACAAACACA+TGG - chr4_3:47540045-47540064 Msa0644030:intron 35.0%
GCCATGATTTCCATTAAATC+CGG - chr4_3:47540067-47540086 Msa0644030:intron 35.0%
TCCGGATTTAATGGAAATCA+TGG + chr4_3:47540071-47540090 None:intergenic 35.0%
!!! AGAATTGCTATTTTCCACGA+AGG + chr4_3:47540160-47540179 None:intergenic 35.0%
!!! TTTTTTGCAGCTTACTATCG+TGG - chr4_3:47540292-47540311 Msa0644030:intron 35.0%
AACAGTAATGTTCCTTTCTG+TGG - chr4_3:47540364-47540383 Msa0644030:intron 35.0%
TTCAAACTAAAGCCACAGAA+AGG + chr4_3:47540379-47540398 None:intergenic 35.0%
AGATATGGACGAAAGCAAAA+GGG - chr4_3:47540564-47540583 Msa0644030:intron 35.0%
! AAAGGGTATGCAAACTTTGT+TGG - chr4_3:47540581-47540600 Msa0644030:intron 35.0%
! TAAAGGTTGATTTACAGAGG+GGG + chr4_3:47540660-47540679 None:intergenic 35.0%
! GTAAAGGTTGATTTACAGAG+GGG + chr4_3:47540661-47540680 None:intergenic 35.0%
! CTGTAAAGGTTGATTTACAG+AGG + chr4_3:47540663-47540682 None:intergenic 35.0%
! AACATTTTTGTTGACGAACG+GGG - chr4_3:47540781-47540800 Msa0644030:intron 35.0%
TAGAGACATGAAACTATGAC+GGG + chr4_3:47541220-47541239 None:intergenic 35.0%
GAGAGAAAAGTAGAAAGACA+TGG - chr4_3:47541262-47541281 Msa0644030:intron 35.0%
GACTCTGTATTTCGAAAACA+CGG + chr4_3:47541293-47541312 None:intergenic 35.0%
! GGTTTAATTGTTTTCTCCAC+TGG - chr4_3:47541476-47541495 Msa0644030:intron 35.0%
AGCATCTCACCTCTTAAATT+GGG + chr4_3:47541714-47541733 None:intergenic 35.0%
AAGCATCTCACCTCTTAAAT+TGG + chr4_3:47541715-47541734 None:intergenic 35.0%
AATTTAAGAGGTGAGATGCT+TGG - chr4_3:47541714-47541733 Msa0644030:intron 35.0%
ATTTAAGAGGTGAGATGCTT+GGG - chr4_3:47541715-47541734 Msa0644030:intron 35.0%
GGGATAATTATTGTAGCCAA+TGG - chr4_3:47541736-47541755 Msa0644030:intron 35.0%
TAAGTTTAGAGACCTACTCT+TGG - chr4_3:47541992-47542011 Msa0644030:intron 35.0%
!!! GATATTTTGACTCCAAGAGT+AGG + chr4_3:47541370-47541389 None:intergenic 35.0%
!! TGGTTGATTTTGATGGTTGT+TGG + chr4_3:47542160-47542179 None:intergenic 35.0%
!! AGAGTCTTGGTTGATTTTGA+TGG + chr4_3:47542167-47542186 None:intergenic 35.0%
! TTGAGGACAGTTTTACAAGT+TGG - chr4_3:47542231-47542250 Msa0644030:intron 35.0%
! TTGTGCGTGATAAGTAGTTT+TGG - chr4_3:47542345-47542364 Msa0644030:intron 35.0%
TCTAACTACCTCTGTTTGAT+TGG - chr4_3:47542414-47542433 Msa0644030:intron 35.0%
CTAACTACCTCTGTTTGATT+GGG - chr4_3:47542415-47542434 Msa0644030:intron 35.0%
! AGTCTGTATCTGGCTTCATA+AGG - chr4_3:47536982-47537001 Msa0644030:three_prime_UTR 40.0%
! GTCTGTATCTGGCTTCATAA+GGG - chr4_3:47536983-47537002 Msa0644030:three_prime_UTR 40.0%
! TCTGTATCTGGCTTCATAAG+GGG - chr4_3:47536984-47537003 Msa0644030:three_prime_UTR 40.0%
CAGCTTCAAAGTACAGTACA+AGG - chr4_3:47537110-47537129 Msa0644030:three_prime_UTR 40.0%
GCCCTGTTCTTCATTTAAGT+TGG - chr4_3:47537249-47537268 Msa0644030:three_prime_UTR 40.0%
CGCCAACTTAAATGAAGAAC+AGG + chr4_3:47537254-47537273 None:intergenic 40.0%
CCTGCAGGATGTTGAAAAAA+TGG + chr4_3:47537284-47537303 None:intergenic 40.0%
!!! CCATTTTTTCAACATCCTGC+AGG - chr4_3:47537281-47537300 Msa0644030:three_prime_UTR 40.0%
AATCTCAGAAAAAAGCCTGC+AGG + chr4_3:47537299-47537318 None:intergenic 40.0%
GTACTGCTCTACATTTCAGT+TGG - chr4_3:47537321-47537340 Msa0644030:three_prime_UTR 40.0%
!! TAAGTGGTATTGGTGAAGAC+GGG + chr4_3:47537554-47537573 None:intergenic 40.0%
!! CTAAGTGGTATTGGTGAAGA+CGG + chr4_3:47537555-47537574 None:intergenic 40.0%
GCCTGCAAGATGTTGAAAAA+TGG - chr4_3:47537738-47537757 Msa0644030:intron 40.0%
GCCAACTTAAACGAAGAACA+GGG - chr4_3:47537769-47537788 Msa0644030:intron 40.0%
CCAACTTAAACGAAGAACAG+GGG - chr4_3:47537770-47537789 Msa0644030:intron 40.0%
TTTCTTCACTTGCGCATATG+CGG - chr4_3:47537866-47537885 Msa0644030:intron 40.0%
CAGCTTCAAAGTACAGTACA+AGG - chr4_3:47537110-47537129 Msa0644030:three_prime_UTR 40.0%
GCTTCAAATGAGAAGCTGTT+AGG - chr4_3:47538145-47538164 Msa0644030:intron 40.0%
! AATTAAGGGCCCGTTTGTTA+CGG + chr4_3:47538411-47538430 None:intergenic 40.0%
CGATCAAGAGAAGCTTAATG+AGG + chr4_3:47538716-47538735 None:intergenic 40.0%
GGTAGAAAATACATGGAAGG+GGG + chr4_3:47538761-47538780 None:intergenic 40.0%
TACACAAAGTAGGCCTTAAG+CGG - chr4_3:47539181-47539200 Msa0644030:intron 40.0%
GTTTCGGTCTCTTAACCATT+TGG - chr4_3:47539218-47539237 Msa0644030:CDS 40.0%
ACGTACTAGACTACTAGTCA+TGG + chr4_3:47539256-47539275 None:intergenic 40.0%
TTGATCTCAATTACCTCGAG+TGG - chr4_3:47539316-47539335 Msa0644030:intron 40.0%
!! TTACACAAGAAGGTGTTTCC+AGG + chr4_3:47539387-47539406 None:intergenic 40.0%
! TGTGATGAAACTGGTAGTGA+AGG + chr4_3:47539742-47539761 None:intergenic 40.0%
CCCAATAGTTGTGATGAAAC+TGG + chr4_3:47539751-47539770 None:intergenic 40.0%
ACGTTTGCCATCAAGTTCAA+TGG + chr4_3:47539877-47539896 None:intergenic 40.0%
CCTTACCTGTTGTAATTGTC+CGG + chr4_3:47539941-47539960 None:intergenic 40.0%
! ATATCAAGTCGTGGTTTTCG+TGG + chr4_3:47540021-47540040 None:intergenic 40.0%
TGGCCATGTGTTTGTGAAAA+TGG + chr4_3:47540051-47540070 None:intergenic 40.0%
! ATTCGTTGGTAAATCCTTCG+TGG - chr4_3:47540143-47540162 Msa0644030:intron 40.0%
CAACATTGAGCAACATGCTT+CGG - chr4_3:47540507-47540526 Msa0644030:intron 40.0%
CAGATATGGACGAAAGCAAA+AGG - chr4_3:47540563-47540582 Msa0644030:intron 40.0%
! AAAGGTTGATTTACAGAGGG+GGG + chr4_3:47540659-47540678 None:intergenic 40.0%
CGTCATGCAAATTTACTGGA+AGG - chr4_3:47540705-47540724 Msa0644030:intron 40.0%
TTAGTTCACTCACAGCAACA+TGG + chr4_3:47540762-47540781 None:intergenic 40.0%
! AAGAGGGTTGAGTTCTGATT+TGG - chr4_3:47540811-47540830 Msa0644030:intron 40.0%
TTGGCACAGCCTAAAAAGAA+AGG + chr4_3:47540934-47540953 None:intergenic 40.0%
! CAGAGAGTTTCCACATTTTC+AGG + chr4_3:47541027-47541046 None:intergenic 40.0%
CTCATTCAACATGAGAGAAG+AGG + chr4_3:47541245-47541264 None:intergenic 40.0%
TGGATGAACGCAGAATTCTT+AGG - chr4_3:47541684-47541703 Msa0644030:intron 40.0%
TTTAAGAGGTGAGATGCTTG+GGG - chr4_3:47541716-47541735 Msa0644030:intron 40.0%
TGTTGAGTGTGTTTAGAGGA+AGG - chr4_3:47541895-47541914 Msa0644030:intron 40.0%
AACATTAGGCTCGTGAGAAA+GGG + chr4_3:47542116-47542135 None:intergenic 40.0%
AAACATTAGGCTCGTGAGAA+AGG + chr4_3:47542117-47542136 None:intergenic 40.0%
! TGGTTGTTGGCTGCAATAAA+AGG + chr4_3:47542147-47542166 None:intergenic 40.0%
AATCAACCAAGACTCTGCAA+CGG - chr4_3:47542171-47542190 Msa0644030:intron 40.0%
! TGTGCTCAACGTTTTCAATG+TGG - chr4_3:47542307-47542326 Msa0644030:intron 40.0%
ACCTCTGTTTGATTGGGATT+AGG - chr4_3:47542421-47542440 Msa0644030:intron 40.0%
TCCTAATCCCAATCAAACAG+AGG + chr4_3:47542425-47542444 None:intergenic 40.0%
CTGTTTGATTGGGATTAGGA+CGG - chr4_3:47542425-47542444 Msa0644030:intron 40.0%
TGCTTATCAATGGTGTGTAG+TGG - chr4_3:47542473-47542492 Msa0644030:five_prime_UTR 40.0%
! CTATGCGTTGATAGATGCTT+CGG - chr4_3:47542544-47542563 Msa0644030:five_prime_UTR 40.0%
! CTGTATCTGGCTTCATAAGG+GGG - chr4_3:47536985-47537004 Msa0644030:three_prime_UTR 45.0%
! TGTATCTGGCTTCATAAGGG+GGG - chr4_3:47536986-47537005 Msa0644030:three_prime_UTR 45.0%
AGCTGCCTCTCCTATAATTG+TGG + chr4_3:47537095-47537114 None:intergenic 45.0%
!! GCTCTAAAAAGGAGAGAGAG+AGG + chr4_3:47537149-47537168 None:intergenic 45.0%
CGCCAACTTAAACGAAGAAC+AGG - chr4_3:47537768-47537787 Msa0644030:intron 45.0%
CCCCTGTTCTTCGTTTAAGT+TGG + chr4_3:47537773-47537792 None:intergenic 45.0%
AGCTGCCTCTCCTATAATTG+TGG + chr4_3:47537095-47537114 None:intergenic 45.0%
!! GCTCTAAAAAGGAGAGAGAG+AGG + chr4_3:47537149-47537168 None:intergenic 45.0%
GGTCCAAGTGGTAGATGTTT+CGG - chr4_3:47539202-47539221 Msa0644030:CDS 45.0%
AGACCGAAACATCTACCACT+TGG + chr4_3:47539208-47539227 None:intergenic 45.0%
CCTAAAGGGGCTGACATAAA+GGG + chr4_3:47539498-47539517 None:intergenic 45.0%
ACCTAAAGGGGCTGACATAA+AGG + chr4_3:47539499-47539518 None:intergenic 45.0%
GTGATCTCAATTACCTCGAG+TGG - chr4_3:47539517-47539536 Msa0644030:intron 45.0%
! CTCCAAATTTGGGATACTGC+AGG - chr4_3:47539903-47539922 Msa0644030:intron 45.0%
GTCCTGCAGTATCCCAAATT+TGG + chr4_3:47539908-47539927 None:intergenic 45.0%
! AATTTGGGATACTGCAGGAC+AGG - chr4_3:47539908-47539927 Msa0644030:intron 45.0%
CCGGACAATTACAACAGGTA+AGG - chr4_3:47539938-47539957 Msa0644030:intron 45.0%
TTCGTGGATAGCCAATTCGT+TGG + chr4_3:47540005-47540024 None:intergenic 45.0%
GAAACACGCTGTTTGACTGT+TGG - chr4_3:47540227-47540246 Msa0644030:intron 45.0%
ATAGACCAGCAATATGCCCA+TGG + chr4_3:47540320-47540339 None:intergenic 45.0%
AGGTGAATACTCCCATGGAA+AGG + chr4_3:47540450-47540469 None:intergenic 45.0%
AAGCTAGGTGAATACTCCCA+TGG + chr4_3:47540455-47540474 None:intergenic 45.0%
GGTAGGGAACAAAGCAGATA+TGG - chr4_3:47540549-47540568 Msa0644030:intron 45.0%
! AAGGTTGATTTACAGAGGGG+GGG + chr4_3:47540658-47540677 None:intergenic 45.0%
! ATTTTTGTTGACGAACGGGG+AGG - chr4_3:47540784-47540803 Msa0644030:intron 45.0%
! TTGCAGCAACAAGCGTTTTG+CGG + chr4_3:47541506-47541525 None:intergenic 45.0%
!! TGTTTTTGTCGTTTGCGGCA+AGG - chr4_3:47541861-47541880 Msa0644030:intron 45.0%
!! GTTTTTGTCGTTTGCGGCAA+GGG - chr4_3:47541862-47541881 Msa0644030:intron 45.0%
GTGTGTTTAGAGGAAGGAAG+CGG - chr4_3:47541901-47541920 Msa0644030:intron 45.0%
ATCAACCAAGACTCTGCAAC+GGG - chr4_3:47542172-47542191 Msa0644030:intron 45.0%
! GCACAAAAATCTGCTTGCTG+TGG - chr4_3:47542208-47542227 Msa0644030:intron 45.0%
!! AAATCTGCTTGCTGTGGTTG+AGG - chr4_3:47542214-47542233 Msa0644030:intron 45.0%
!! TTGAAAAATTAATAAAAAAA+AGG + chr4_3:47538438-47538457 None:intergenic 5.0%
GGCATTCACTTGCGCATATG+CGG - chr4_3:47537016-47537035 Msa0644030:three_prime_UTR 50.0%
ATTCACTTGCGCATATGCGG+AGG - chr4_3:47537019-47537038 Msa0644030:three_prime_UTR 50.0%
TCCTTGAGCTACACTTGGCT+TGG + chr4_3:47537512-47537531 None:intergenic 50.0%
AAGCCAAGTGTAGCTCAAGG+AGG - chr4_3:47537511-47537530 Msa0644030:intron 50.0%
AGCCAAGTGTAGCTCAAGGA+GGG - chr4_3:47537512-47537531 Msa0644030:intron 50.0%
GAGAGAGAGAGAGAGAGAAG+TGG + chr4_3:47538560-47538579 None:intergenic 50.0%
CTTCTCTTGATCGGCGATAG+CGG - chr4_3:47538723-47538742 Msa0644030:intron 50.0%
TCTACCACTTGGACCGCTTA+AGG + chr4_3:47539197-47539216 None:intergenic 50.0%
CTTTACTGTTGCACCACTCG+AGG + chr4_3:47539332-47539351 None:intergenic 50.0%
CACTAAAGCTCCCGCATACA+CGG + chr4_3:47539465-47539484 None:intergenic 50.0%
! ATGCGGGAGCTTTAGTGCAT+CGG - chr4_3:47539468-47539487 Msa0644030:intron 50.0%
CCCTTTATGTCAGCCCCTTT+AGG - chr4_3:47539495-47539514 Msa0644030:intron 50.0%
CGGTTCCGGACAATTACAAC+AGG - chr4_3:47539933-47539952 Msa0644030:intron 50.0%
GGATGGCAGATATCAAGTCG+TGG + chr4_3:47540030-47540049 None:intergenic 50.0%
GCTGTTTGACTGTTGGCATC+TGG - chr4_3:47540234-47540253 Msa0644030:intron 50.0%
! AGCTTACTATCGTGGTGCCA+TGG - chr4_3:47540300-47540319 Msa0644030:intron 50.0%
!! GCTTACTATCGTGGTGCCAT+GGG - chr4_3:47540301-47540320 Msa0644030:intron 50.0%
! AGGTTGATTTACAGAGGGGG+GGG + chr4_3:47540657-47540676 None:intergenic 50.0%
ACACACACATACGAGAGAGG+AGG + chr4_3:47540867-47540886 None:intergenic 50.0%
GACACACACACATACGAGAG+AGG + chr4_3:47540870-47540889 None:intergenic 50.0%
CATACTCATCAGCCAGTGCT+TGG + chr4_3:47540967-47540986 None:intergenic 50.0%
!! CAAGCACTGGCTGATGAGTA+TGG - chr4_3:47540965-47540984 Msa0644030:intron 50.0%
! GCTTGCTGACACTGACAACA+AGG - chr4_3:47541153-47541172 Msa0644030:intron 50.0%
TGACACTGACAACAAGGCAG+AGG - chr4_3:47541159-47541178 Msa0644030:intron 50.0%
! AGCGTTTTGCGGTATTCCAG+TGG + chr4_3:47541495-47541514 None:intergenic 50.0%
AGAGGAAGGAAGCGGAAAAG+TGG - chr4_3:47541909-47541928 Msa0644030:intron 50.0%
TCAACCAAGACTCTGCAACG+GGG - chr4_3:47542173-47542192 Msa0644030:intron 50.0%
CTTCATAAGGGGGGAGTTGC+TGG - chr4_3:47536995-47537014 Msa0644030:three_prime_UTR 55.0%
GCCAAGCCAAGTGTAGCTCA+AGG - chr4_3:47537508-47537527 Msa0644030:intron 55.0%
GCCAAGTGTAGCTCAAGGAG+GGG - chr4_3:47537513-47537532 Msa0644030:intron 55.0%
TCCCCTCCTTGAGCTACACT+TGG + chr4_3:47537517-47537536 None:intergenic 55.0%
CTTCACTTGCGCATATGCGG+AGG - chr4_3:47537869-47537888 Msa0644030:intron 55.0%
!! CGTTTTGATGGCTGCTCCAC+CGG - chr4_3:47538665-47538684 Msa0644030:intron 55.0%
TAGGCCTTAAGCGGTCCAAG+TGG - chr4_3:47539190-47539209 Msa0644030:CDS 55.0%
CACGTGACGAGTTCAAGTCC+TGG - chr4_3:47539366-47539385 Msa0644030:intron 55.0%
! TGCGGGAGCTTTAGTGCATC+GGG - chr4_3:47539469-47539488 Msa0644030:intron 55.0%
GCAGACACACTAACCACTCG+AGG + chr4_3:47539533-47539552 None:intergenic 55.0%
CGTTGCACGCTGAGATACCT+TGG - chr4_3:47539563-47539582 Msa0644030:intron 55.0%
GGGATACTGCAGGACAGGAA+CGG - chr4_3:47539913-47539932 Msa0644030:intron 55.0%
!! TGGTGCCATGGGCATATTGC+TGG - chr4_3:47540312-47540331 Msa0644030:intron 55.0%
! GGTTGATTTACAGAGGGGGG+GGG + chr4_3:47540656-47540675 None:intergenic 55.0%
TAGGCTGTGCCAACGTCCAA+AGG - chr4_3:47540941-47540960 Msa0644030:five_prime_UTR 55.0%
! AGTGCTTGGCCTTTGGACGT+TGG + chr4_3:47540953-47540972 None:intergenic 55.0%
AACGTCCAAAGGCCAAGCAC+TGG - chr4_3:47540952-47540971 Msa0644030:intron 55.0%
! ATCAGCCAGTGCTTGGCCTT+TGG + chr4_3:47540960-47540979 None:intergenic 55.0%
TAATCGGCACGAGCCCTTGC+CGG + chr4_3:47538687-47538706 None:intergenic 60.0%
CATACACGGCGTCTGGGAAG+GGG + chr4_3:47539451-47539470 None:intergenic 60.0%
GCATACACGGCGTCTGGGAA+GGG + chr4_3:47539452-47539471 None:intergenic 60.0%
CTTCCCAGACGCCGTGTATG+CGG - chr4_3:47539451-47539470 Msa0644030:intron 60.0%
TTCCCAGACGCCGTGTATGC+GGG - chr4_3:47539452-47539471 Msa0644030:intron 60.0%
CTGCAGGACAGGAACGGTTC+CGG - chr4_3:47539919-47539938 Msa0644030:intron 60.0%
GGGGGAACGAAAAAGGCAGG+AGG + chr4_3:47540638-47540657 None:intergenic 60.0%
AGAGGGGGGGGGAACGAAAA+AGG + chr4_3:47540645-47540664 None:intergenic 60.0%
ACGAACGGGGAGGTTCGAAG+AGG - chr4_3:47540794-47540813 Msa0644030:intron 60.0%
CGAACGGGGAGGTTCGAAGA+GGG - chr4_3:47540795-47540814 Msa0644030:intron 60.0%
CAGACCCCGTTGCAGAGTCT+TGG + chr4_3:47542180-47542199 None:intergenic 60.0%
CAAGACTCTGCAACGGGGTC+TGG - chr4_3:47542178-47542197 Msa0644030:intron 60.0%
TGATGGCTGCTCCACCGGCA+AGG - chr4_3:47538670-47538689 Msa0644030:intron 65.0%
GATGGCTGCTCCACCGGCAA+GGG - chr4_3:47538671-47538690 Msa0644030:intron 65.0%
CGCATACACGGCGTCTGGGA+AGG + chr4_3:47539453-47539472 None:intergenic 65.0%
CTCCCGCATACACGGCGTCT+GGG + chr4_3:47539457-47539476 None:intergenic 65.0%
GGGGGGGGAACGAAAAAGGC+AGG + chr4_3:47540641-47540660 None:intergenic 65.0%
CTCTGCAACGGGGTCTGGAC+AGG - chr4_3:47542183-47542202 Msa0644030:intron 65.0%
GCTCCCGCATACACGGCGTC+TGG + chr4_3:47539458-47539477 None:intergenic 70.0%
TCGGCACGAGCCCTTGCCGG+TGG + chr4_3:47538684-47538703 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 47536980 47542615 47536980 ID=Msa0644030;Name=Msa0644030
chr4_3 mRNA 47536980 47542615 47536980 ID=Msa0644030-mRNA-1;Parent=Msa0644030;Name=Msa0644030-mRNA-1;_AED=0.14;_eAED=0.14;_QI=197|0.85|0.62|1|0.85|0.75|8|381|253
chr4_3 exon 47536980 47537438 47536980 ID=Msa0644030-mRNA-1:exon:11273;Parent=Msa0644030-mRNA-1
chr4_3 exon 47538415 47538651 47538415 ID=Msa0644030-mRNA-1:exon:11272;Parent=Msa0644030-mRNA-1
chr4_3 exon 47539010 47539100 47539010 ID=Msa0644030-mRNA-1:exon:11271;Parent=Msa0644030-mRNA-1
chr4_3 exon 47539185 47539293 47539185 ID=Msa0644030-mRNA-1:exon:11270;Parent=Msa0644030-mRNA-1
chr4_3 exon 47539641 47539741 47539641 ID=Msa0644030-mRNA-1:exon:11269;Parent=Msa0644030-mRNA-1
chr4_3 exon 47539826 47539898 47539826 ID=Msa0644030-mRNA-1:exon:11268;Parent=Msa0644030-mRNA-1
chr4_3 exon 47540851 47540968 47540851 ID=Msa0644030-mRNA-1:exon:11267;Parent=Msa0644030-mRNA-1
chr4_3 exon 47542464 47542615 47542464 ID=Msa0644030-mRNA-1:exon:11266;Parent=Msa0644030-mRNA-1
chr4_3 five_prime_UTR 47542464 47542615 47542464 ID=Msa0644030-mRNA-1:five_prime_utr;Parent=Msa0644030-mRNA-1
chr4_3 five_prime_UTR 47540924 47540968 47540924 ID=Msa0644030-mRNA-1:five_prime_utr;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47540851 47540923 47540851 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47539826 47539898 47539826 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47539641 47539741 47539641 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47539185 47539293 47539185 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47539010 47539100 47539010 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47538415 47538651 47538415 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 CDS 47537361 47537438 47537361 ID=Msa0644030-mRNA-1:cds;Parent=Msa0644030-mRNA-1
chr4_3 three_prime_UTR 47536980 47537360 47536980 ID=Msa0644030-mRNA-1:three_prime_utr;Parent=Msa0644030-mRNA-1
Gene Sequence

>Msa0644030

ATGGCTGCTCCACCGGCAAGGGCTCGTGCCGATTACGATTACCTCATTAAGCTTCTCTTGATCGGCGATAGCGGTGTTGGAAAAAGTTGTCTTCTTTTGCGTTTTTCTGATGGTTCCTTCACTACCAGTTTCATCACAACTATTGGTATTGATTTTAAGATAAGAACCATTGAACTTGATGGCAAACGTATCAAGCTCCAAATTTGGGATACTGCAGGACAGGAACGGTTCCGGACAATTACAACAGCTTACTATCGTGGTGCCATGGGCATATTGCTGGTCTATGATGTTACTGATGAAGCATCATTTAACAGTAATGTTCCTTTCTGTGGCTTTAGTTTGAAATCTGCTGATCTGAATTGGATTCGCAACATTGAGCAACATGCTTCGGATAATGTTAACAAAATACTGGTAGGGAACAAAGCAGATATGGACGAAAGCAAAAGGGCTGTGCCAACGTCCAAAGGCCAAGCACTGGCTGATGAGTATGGAATCAAATTCTTCGAAACTGTAAGTGGTGTATTTTACCTGAAAATGTGGAAACTCTCTGAACTTCTATGTTGTTATGCTCATGAAAATGCTCAATTGCAGAGTGCAAAGACAAATCTAAATGTGGAGGAAGTTTTCTTTTCCATAGCTAGAGACATAAAACAAAGGCTTGCTGACACTGACAACAAGGCAGAGCCAACAACCATCAAAATCAACCAAGACTCTGCAACGGGGTCTGGACAGGCTGCACAAAAATCTGCTTGCTGTGGTTGA
Protein sequence

>Msa0644030

MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNSNVPFCGFSLKSADLNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETVSGVFYLKMWKLSELLCCYAHENAQLQSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQDSATGSGQAAQKSACCG*