Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0644800 | XP_003606163.2 | 97.967 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1001 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0644800 | sp|Q93ZB9|FACR3_ARATH | 58.642 | 486 | 200 | 1 | 6 | 491 | 9 | 493 | 0.0 | 619 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001450 | Msa0644800 | 0.832422 | 9.540179e-56 | -8.615850e-47 |
Msa0003720 | Msa0644800 | 0.828232 | 1.008048e-54 | -8.615850e-47 |
Msa0004540 | Msa0644800 | 0.806155 | 9.436284e-50 | -8.615850e-47 |
Msa0012940 | Msa0644800 | 0.807080 | 6.018137e-50 | -8.615850e-47 |
Msa0026130 | Msa0644800 | 0.818580 | 1.819629e-52 | -8.615850e-47 |
Msa0027230 | Msa0644800 | 0.817046 | 4.039505e-52 | -8.615850e-47 |
Msa0027260 | Msa0644800 | 0.802250 | 6.134147e-49 | -8.615850e-47 |
Msa0029630 | Msa0644800 | 0.841244 | 5.343703e-58 | -8.615850e-47 |
Msa0033880 | Msa0644800 | 0.807815 | 4.203601e-50 | -8.615850e-47 |
Msa0036130 | Msa0644800 | 0.826857 | 2.155454e-54 | -8.615850e-47 |
Msa0041690 | Msa0644800 | 0.808597 | 2.864493e-50 | -8.615850e-47 |
Msa0048180 | Msa0644800 | 0.812796 | 3.540059e-51 | -8.615850e-47 |
Msa0051020 | Msa0644800 | 0.806532 | 7.857794e-50 | -8.615850e-47 |
Msa0051630 | Msa0644800 | 0.804843 | 1.777911e-49 | -8.615850e-47 |
Msa0051740 | Msa0644800 | 0.806436 | 8.233342e-50 | -8.615850e-47 |
Msa0057710 | Msa0644800 | 0.813654 | 2.294423e-51 | -8.615850e-47 |
Msa0062120 | Msa0644800 | 0.809302 | 2.023447e-50 | -8.615850e-47 |
Msa0069330 | Msa0644800 | 0.810592 | 1.067861e-50 | -8.615850e-47 |
Msa0073670 | Msa0644800 | 0.814672 | 1.367520e-51 | -8.615850e-47 |
Msa0079920 | Msa0644800 | 0.833292 | 5.797806e-56 | -8.615850e-47 |
Msa0091610 | Msa0644800 | 0.802856 | 4.600345e-49 | -8.615850e-47 |
Msa0093850 | Msa0644800 | 0.814907 | 1.212891e-51 | -8.615850e-47 |
Msa0101270 | Msa0644800 | 0.800134 | 1.661777e-48 | -8.615850e-47 |
Msa0104550 | Msa0644800 | 0.806189 | 9.281679e-50 | -8.615850e-47 |
Msa0105520 | Msa0644800 | 0.819210 | 1.309227e-52 | -8.615850e-47 |
Msa0106620 | Msa0644800 | 0.812656 | 3.798960e-51 | -8.615850e-47 |
Msa0106710 | Msa0644800 | 0.807353 | 5.269162e-50 | -8.615850e-47 |
Msa0109050 | Msa0644800 | 0.807556 | 4.772458e-50 | -8.615850e-47 |
Msa0112790 | Msa0644800 | 0.812481 | 4.149741e-51 | -8.615850e-47 |
Msa0614000 | Msa0644800 | 0.802263 | 6.096629e-49 | -8.615850e-47 |
Msa0619420 | Msa0644800 | 0.817237 | 3.659890e-52 | -8.615850e-47 |
Msa0628420 | Msa0644800 | 0.818510 | 1.887500e-52 | -8.615850e-47 |
Msa0630940 | Msa0644800 | 0.801749 | 7.773227e-49 | -8.615850e-47 |
Msa0638480 | Msa0644800 | 0.836687 | 8.087352e-57 | -8.615850e-47 |
Msa0642970 | Msa0644800 | 0.812431 | 4.255359e-51 | -8.615850e-47 |
Msa0644030 | Msa0644800 | 0.832200 | 1.082439e-55 | -8.615850e-47 |
Msa0644800 | Msa0659550 | 0.810324 | 1.220076e-50 | -8.615850e-47 |
Msa0644800 | Msa0662890 | 0.818700 | 1.709544e-52 | -8.615850e-47 |
Msa0644800 | Msa0663270 | 0.814754 | 1.311689e-51 | -8.615850e-47 |
Msa0644800 | Msa0666230 | 0.809638 | 1.713700e-50 | -8.615850e-47 |
Msa0644800 | Msa0669180 | 0.833786 | 4.367034e-56 | -8.615850e-47 |
Msa0644800 | Msa0669520 | 0.817249 | 3.637772e-52 | -8.615850e-47 |
Msa0644800 | Msa0680700 | 0.912513 | 1.787553e-83 | -8.615850e-47 |
Msa0644800 | Msa0682680 | 0.809558 | 1.783065e-50 | -8.615850e-47 |
Msa0644800 | Msa0695130 | 0.806833 | 6.787482e-50 | -8.615850e-47 |
Msa0644800 | Msa0734960 | 0.812374 | 4.378183e-51 | -8.615850e-47 |
Msa0644800 | Msa0748920 | 0.811634 | 6.346461e-51 | -8.615850e-47 |
Msa0644800 | Msa0752510 | 0.813070 | 3.083335e-51 | -8.615850e-47 |
Msa0644800 | Msa0752700 | 0.812065 | 5.113134e-51 | -8.615850e-47 |
Msa0644800 | Msa0771280 | 0.805573 | 1.250815e-49 | -8.615850e-47 |
Msa0644800 | Msa0790400 | 0.833812 | 4.300328e-56 | -8.615850e-47 |
Msa0644800 | Msa0794970 | 0.810611 | 1.057560e-50 | -8.615850e-47 |
Msa0644800 | Msa0797930 | 0.810090 | 1.369868e-50 | -8.615850e-47 |
Msa0644800 | Msa0804250 | 0.823461 | 1.368235e-53 | -8.615850e-47 |
Msa0644800 | Msa0808800 | 0.809834 | 1.555166e-50 | -8.615850e-47 |
Msa0644800 | Msa0809980 | 0.823279 | 1.509123e-53 | -8.615850e-47 |
Msa0644800 | Msa0826500 | 0.800072 | 1.710508e-48 | -8.615850e-47 |
Msa0644800 | Msa0830880 | 0.832757 | 7.879579e-56 | -8.615850e-47 |
Msa0644800 | Msa0831100 | 0.812378 | 4.368576e-51 | -8.615850e-47 |
Msa0644800 | Msa0833190 | -0.802070 | 6.678631e-49 | -8.615850e-47 |
Msa0644800 | Msa0850150 | 0.806796 | 6.913441e-50 | -8.615850e-47 |
Msa0644800 | Msa0861510 | 0.801861 | 7.372208e-49 | -8.615850e-47 |
Msa0644800 | Msa0884290 | 0.800555 | 1.364150e-48 | -8.615850e-47 |
Msa0644800 | Msa0901110 | 0.816638 | 4.987911e-52 | -8.615850e-47 |
Msa0644800 | Msa0903780 | 0.813546 | 2.423119e-51 | -8.615850e-47 |
Msa0644800 | Msa0932570 | 0.808020 | 3.802046e-50 | -8.615850e-47 |
Msa0644800 | Msa0934140 | 0.820255 | 7.555843e-53 | -8.615850e-47 |
Msa0644800 | Msa0943170 | 0.826443 | 2.705778e-54 | -8.615850e-47 |
Msa0644800 | Msa0944660 | 0.802074 | 6.666564e-49 | -8.615850e-47 |
Msa0644800 | Msa0970530 | 0.807218 | 5.627864e-50 | -8.615850e-47 |
Msa0644800 | Msa0970600 | 0.809783 | 1.594893e-50 | -8.615850e-47 |
Msa0644800 | Msa1006840 | 0.804429 | 2.169016e-49 | -8.615850e-47 |
Msa0644800 | Msa1009750 | 0.812946 | 3.282631e-51 | -8.615850e-47 |
Msa0644800 | Msa1019240 | 0.804351 | 2.252748e-49 | -8.615850e-47 |
Msa0644800 | Msa1019260 | 0.815329 | 9.777754e-52 | -8.615850e-47 |
Msa0644800 | Msa1029070 | 0.808378 | 3.189976e-50 | -8.615850e-47 |
Msa0644800 | Msa1055010 | 0.824007 | 1.018842e-53 | -8.615850e-47 |
Msa0644800 | Msa1066490 | 0.802015 | 6.855120e-49 | -8.615850e-47 |
Msa0644800 | Msa1078170 | 0.827087 | 1.898612e-54 | -8.615850e-47 |
Msa0644800 | Msa1078420 | 0.803654 | 3.144067e-49 | -8.615850e-47 |
Msa0644800 | Msa1079230 | 0.824198 | 9.190642e-54 | -8.615850e-47 |
Msa0644800 | Msa1081930 | 0.822073 | 2.879040e-53 | -8.615850e-47 |
Msa0644800 | Msa1089450 | 0.809263 | 2.063267e-50 | -8.615850e-47 |
Msa0644800 | Msa1093840 | 0.834520 | 2.858067e-56 | -8.615850e-47 |
Msa0644800 | Msa1097820 | 0.812613 | 3.882605e-51 | -8.615850e-47 |
Msa0644800 | Msa1104210 | 0.800741 | 1.250186e-48 | -8.615850e-47 |
Msa0644800 | Msa1106700 | 0.805759 | 1.143230e-49 | -8.615850e-47 |
Msa0644800 | Msa1123350 | 0.855316 | 6.845572e-62 | -8.615850e-47 |
Msa0644800 | Msa1123380 | 0.800315 | 1.526484e-48 | -8.615850e-47 |
Msa0644800 | Msa1126830 | 0.845655 | 3.547246e-59 | -8.615850e-47 |
Msa0644800 | Msa1127540 | 0.830008 | 3.739932e-55 | -8.615850e-47 |
Msa0644800 | Msa1127590 | 0.858158 | 9.980946e-63 | -8.615850e-47 |
Msa0644800 | Msa1156160 | 0.808060 | 3.729199e-50 | -8.615850e-47 |
Msa0644800 | Msa1157870 | 0.817904 | 2.588651e-52 | -8.615850e-47 |
Msa0644800 | Msa1158230 | 0.806025 | 1.005069e-49 | -8.615850e-47 |
Msa0644800 | Msa1165490 | 0.812557 | 3.993281e-51 | -8.615850e-47 |
Msa0644800 | Msa1165780 | 0.829548 | 4.839820e-55 | -8.615850e-47 |
Msa0644800 | Msa1169530 | 0.809624 | 1.726032e-50 | -8.615850e-47 |
Msa0644800 | Msa1169550 | 0.812168 | 4.854887e-51 | -8.615850e-47 |
Msa0644800 | Msa1201810 | 0.811669 | 6.237578e-51 | -8.615850e-47 |
Msa0644800 | Msa1202580 | 0.815527 | 8.830233e-52 | -8.615850e-47 |
Msa0644800 | Msa1203710 | 0.824625 | 7.295450e-54 | -8.615850e-47 |
Msa0644800 | Msa1206650 | 0.826133 | 3.205880e-54 | -8.615850e-47 |
Msa0644800 | Msa1213810 | 0.804747 | 1.862610e-49 | -8.615850e-47 |
Msa0644800 | Msa1214320 | 0.839095 | 1.944847e-57 | -8.615850e-47 |
Msa0644800 | Msa1217210 | 0.808275 | 3.354475e-50 | -8.615850e-47 |
Msa0644800 | Msa1221060 | 0.832659 | 8.334613e-56 | -8.615850e-47 |
Msa0644800 | Msa1222350 | 0.805750 | 1.147869e-49 | -8.615850e-47 |
Msa0644800 | Msa1231820 | 0.840393 | 8.936175e-58 | -8.615850e-47 |
Msa0644800 | Msa1251160 | 0.862100 | 6.436901e-64 | -8.615850e-47 |
Msa0644800 | Msa1254730 | 0.803513 | 3.363416e-49 | -8.615850e-47 |
Msa0644800 | Msa1255410 | 0.809339 | 1.987133e-50 | -8.615850e-47 |
Msa0644800 | Msa1261070 | 0.828032 | 1.126418e-54 | -8.615850e-47 |
Msa0644800 | Msa1262890 | 0.809920 | 1.490802e-50 | -8.615850e-47 |
Msa0644800 | Msa1264710 | 0.815665 | 8.228646e-52 | -8.615850e-47 |
Msa0644800 | Msa1265590 | 0.805634 | 1.214319e-49 | -8.615850e-47 |
Msa0644800 | Msa1277080 | 0.811751 | 5.986646e-51 | -8.615850e-47 |
Msa0644800 | Msa1290450 | 0.803920 | 2.768596e-49 | -8.615850e-47 |
Msa0644800 | Msa1303240 | 0.838743 | 2.398294e-57 | -8.615850e-47 |
Msa0644800 | Msa1303250 | 0.832968 | 6.983647e-56 | -8.615850e-47 |
Msa0644800 | Msa1317950 | 0.824752 | 6.807461e-54 | -8.615850e-47 |
Msa0644800 | Msa1317960 | 0.832086 | 1.155290e-55 | -8.615850e-47 |
Msa0644800 | Msa1323690 | 0.804074 | 2.571748e-49 | -8.615850e-47 |
Msa0644800 | Msa1329050 | -0.800689 | 1.281226e-48 | -8.615850e-47 |
Msa0644800 | Msa1332590 | 0.800592 | 1.340823e-48 | -8.615850e-47 |
Msa0644800 | Msa1335160 | 0.812741 | 3.639121e-51 | -8.615850e-47 |
Msa0644800 | Msa1351540 | 0.808202 | 3.477968e-50 | -8.615850e-47 |
Msa0644800 | Msa1356610 | 0.842086 | 3.205263e-58 | -8.615850e-47 |
Msa0644800 | Msa1361400 | 0.846063 | 2.748055e-59 | -8.615850e-47 |
Msa0644800 | Msa1361410 | 0.826039 | 3.375945e-54 | -8.615850e-47 |
Msa0644800 | Msa1362420 | 0.803205 | 3.896369e-49 | -8.615850e-47 |
Msa0644800 | Msa1367590 | 0.840660 | 7.607197e-58 | -8.615850e-47 |
Msa0644800 | Msa1369150 | 0.817121 | 3.885677e-52 | -8.615850e-47 |
Msa0644800 | Msa1369690 | 0.814090 | 1.839299e-51 | -8.615850e-47 |
Msa0644800 | Msa1373100 | 0.815622 | 8.411773e-52 | -8.615850e-47 |
Msa0644800 | Msa1374060 | 0.837672 | 4.527764e-57 | -8.615850e-47 |
Msa0644800 | Msa1376650 | 0.824146 | 9.454682e-54 | -8.615850e-47 |
Msa0644800 | Msa1381350 | 0.809053 | 2.288603e-50 | -8.615850e-47 |
Msa0644800 | Msa1382560 | 0.817411 | 3.343565e-52 | -8.615850e-47 |
Msa0644800 | Msa1383530 | 0.806926 | 6.488390e-50 | -8.615850e-47 |
Msa0644800 | Msa1411500 | 0.804959 | 1.681490e-49 | -8.615850e-47 |
Msa0644800 | Msa1411950 | 0.822682 | 2.079270e-53 | -8.615850e-47 |
Msa0644800 | Msa1416370 | 0.802199 | 6.282817e-49 | -8.615850e-47 |
Msa0644800 | Msa1418240 | 0.812352 | 4.427713e-51 | -8.615850e-47 |
Msa0644800 | Msa1421560 | 0.804769 | 1.842196e-49 | -8.615850e-47 |
Msa0644800 | Msa1422950 | 0.815419 | 9.335942e-52 | -8.615850e-47 |
Msa0644800 | Msa1440880 | 0.814378 | 1.588737e-51 | -8.615850e-47 |
Msa0644800 | Msa1443300 | 0.844084 | 9.412608e-59 | -8.615850e-47 |
Msa0644800 | Msa1446810 | 0.825967 | 3.512214e-54 | -8.615850e-47 |
Msa0644800 | Msa1450720 | 0.828169 | 1.043711e-54 | -8.615850e-47 |
Msa0644800 | Msa1451160 | 0.831066 | 2.060376e-55 | -8.615850e-47 |
Msa0644800 | Msa1458810 | 0.809160 | 2.171005e-50 | -8.615850e-47 |
Msa0644800 | Msa1459960 | 0.818711 | 1.699420e-52 | -8.615850e-47 |
Msa0644800 | Msa1461540 | 0.811788 | 5.876145e-51 | -8.615850e-47 |
Msa0122970 | Msa0644800 | 0.809574 | 1.768750e-50 | -8.615850e-47 |
Msa0125450 | Msa0644800 | 0.836082 | 1.152204e-56 | -8.615850e-47 |
Msa0125540 | Msa0644800 | 0.822336 | 2.500964e-53 | -8.615850e-47 |
Msa0127850 | Msa0644800 | 0.807949 | 3.937223e-50 | -8.615850e-47 |
Msa0130240 | Msa0644800 | 0.850814 | 1.330879e-60 | -8.615850e-47 |
Msa0136120 | Msa0644800 | 0.811774 | 5.918290e-51 | -8.615850e-47 |
Msa0137610 | Msa0644800 | -0.804675 | 1.927558e-49 | -8.615850e-47 |
Msa0138360 | Msa0644800 | 0.801874 | 7.327951e-49 | -8.615850e-47 |
Msa0144360 | Msa0644800 | 0.800220 | 1.596193e-48 | -8.615850e-47 |
Msa0145580 | Msa0644800 | 0.808620 | 2.831503e-50 | -8.615850e-47 |
Msa0146080 | Msa0644800 | 0.823625 | 1.252381e-53 | -8.615850e-47 |
Msa0146280 | Msa0644800 | 0.835079 | 2.067350e-56 | -8.615850e-47 |
Msa0147980 | Msa0644800 | 0.810239 | 1.272237e-50 | -8.615850e-47 |
Msa0163040 | Msa0644800 | 0.818904 | 1.536551e-52 | -8.615850e-47 |
Msa0166590 | Msa0644800 | 0.809834 | 1.555654e-50 | -8.615850e-47 |
Msa0169610 | Msa0644800 | 0.808827 | 2.557392e-50 | -8.615850e-47 |
Msa0173800 | Msa0644800 | 0.801293 | 9.639030e-49 | -8.615850e-47 |
Msa0174000 | Msa0644800 | 0.805532 | 1.275575e-49 | -8.615850e-47 |
Msa0188350 | Msa0644800 | 0.818362 | 2.039113e-52 | -8.615850e-47 |
Msa0188690 | Msa0644800 | 0.823223 | 1.555215e-53 | -8.615850e-47 |
Msa0197420 | Msa0644800 | 0.820226 | 7.670619e-53 | -8.615850e-47 |
Msa0199420 | Msa0644800 | 0.823323 | 1.473286e-53 | -8.615850e-47 |
Msa0206690 | Msa0644800 | 0.817293 | 3.554653e-52 | -8.615850e-47 |
Msa0215800 | Msa0644800 | 0.814392 | 1.577094e-51 | -8.615850e-47 |
Msa0220730 | Msa0644800 | 0.803323 | 3.682518e-49 | -8.615850e-47 |
Msa0230150 | Msa0644800 | 0.813859 | 2.067881e-51 | -8.615850e-47 |
Msa0231100 | Msa0644800 | 0.812459 | 4.195809e-51 | -8.615850e-47 |
Msa0231980 | Msa0644800 | 0.809876 | 1.523126e-50 | -8.615850e-47 |
Msa0372810 | Msa0644800 | 0.805291 | 1.433182e-49 | -8.615850e-47 |
Msa0376280 | Msa0644800 | 0.818225 | 2.190224e-52 | -8.615850e-47 |
Msa0380300 | Msa0644800 | 0.812434 | 4.247190e-51 | -8.615850e-47 |
Msa0382370 | Msa0644800 | 0.800089 | 1.697298e-48 | -8.615850e-47 |
Msa0388990 | Msa0644800 | 0.829334 | 5.457281e-55 | -8.615850e-47 |
Msa0419720 | Msa0644800 | 0.804332 | 2.272840e-49 | -8.615850e-47 |
Msa0434570 | Msa0644800 | 0.808612 | 2.843051e-50 | -8.615850e-47 |
Msa0434770 | Msa0644800 | 0.803864 | 2.843808e-49 | -8.615850e-47 |
Msa0443390 | Msa0644800 | 0.800174 | 1.630835e-48 | -8.615850e-47 |
Msa0456880 | Msa0644800 | 0.830765 | 2.441840e-55 | -8.615850e-47 |
Msa0481970 | Msa0644800 | 0.821084 | 4.871301e-53 | -8.615850e-47 |
Msa0241830 | Msa0644800 | 0.846491 | 2.100436e-59 | -8.615850e-47 |
Msa0244980 | Msa0644800 | 0.809953 | 1.466540e-50 | -8.615850e-47 |
Msa0245650 | Msa0644800 | 0.807428 | 5.078597e-50 | -8.615850e-47 |
Msa0249580 | Msa0644800 | 0.855501 | 6.047150e-62 | -8.615850e-47 |
Msa0262480 | Msa0644800 | 0.827070 | 1.916066e-54 | -8.615850e-47 |
Msa0270210 | Msa0644800 | 0.801934 | 7.123435e-49 | -8.615850e-47 |
Msa0275360 | Msa0644800 | 0.800872 | 1.175494e-48 | -8.615850e-47 |
Msa0279850 | Msa0644800 | 0.826508 | 2.611049e-54 | -8.615850e-47 |
Msa0281530 | Msa0644800 | 0.801602 | 8.334932e-49 | -8.615850e-47 |
Msa0295080 | Msa0644800 | 0.832126 | 1.129473e-55 | -8.615850e-47 |
Msa0296250 | Msa0644800 | 0.802684 | 4.992016e-49 | -8.615850e-47 |
Msa0300320 | Msa0644800 | 0.805991 | 1.021801e-49 | -8.615850e-47 |
Msa0300350 | Msa0644800 | 0.801889 | 7.275189e-49 | -8.615850e-47 |
Msa0307850 | Msa0644800 | 0.858187 | 9.782728e-63 | -8.615850e-47 |
Msa0317970 | Msa0644800 | 0.806709 | 7.212281e-50 | -8.615850e-47 |
Msa0320590 | Msa0644800 | 0.810355 | 1.201084e-50 | -8.615850e-47 |
Msa0322900 | Msa0644800 | 0.859888 | 3.027193e-63 | -8.615850e-47 |
Msa0326480 | Msa0644800 | 0.815306 | 9.893144e-52 | -8.615850e-47 |
Msa0333560 | Msa0644800 | 0.803939 | 2.744319e-49 | -8.615850e-47 |
Msa0339500 | Msa0644800 | 0.830041 | 3.671186e-55 | -8.615850e-47 |
Msa0341690 | Msa0644800 | 0.821842 | 3.255560e-53 | -8.615850e-47 |
Msa0343190 | Msa0644800 | 0.803151 | 3.996924e-49 | -8.615850e-47 |
Msa0357900 | Msa0644800 | 0.800335 | 1.512734e-48 | -8.615850e-47 |
Msa0363060 | Msa0644800 | 0.811038 | 8.550733e-51 | -8.615850e-47 |
Msa0484290 | Msa0644800 | 0.807730 | 4.382802e-50 | -8.615850e-47 |
Msa0484740 | Msa0644800 | 0.800116 | 1.676183e-48 | -8.615850e-47 |
Msa0485240 | Msa0644800 | 0.809976 | 1.449972e-50 | -8.615850e-47 |
Msa0511770 | Msa0644800 | 0.824787 | 6.678810e-54 | -8.615850e-47 |
Msa0516120 | Msa0644800 | 0.809947 | 1.470525e-50 | -8.615850e-47 |
Msa0518030 | Msa0644800 | 0.831725 | 1.418104e-55 | -8.615850e-47 |
Msa0524500 | Msa0644800 | 0.822954 | 1.796633e-53 | -8.615850e-47 |
Msa0527820 | Msa0644800 | 0.801037 | 1.087876e-48 | -8.615850e-47 |
Msa0531250 | Msa0644800 | 0.820138 | 8.037591e-53 | -8.615850e-47 |
Msa0534400 | Msa0644800 | 0.818533 | 1.865051e-52 | -8.615850e-47 |
Msa0535110 | Msa0644800 | 0.807729 | 4.384068e-50 | -8.615850e-47 |
Msa0542470 | Msa0644800 | 0.809408 | 1.920532e-50 | -8.615850e-47 |
Msa0545860 | Msa0644800 | 0.941545 | 3.450336e-101 | -8.615850e-47 |
Msa0546540 | Msa0644800 | 0.800055 | 1.724730e-48 | -8.615850e-47 |
Msa0547160 | Msa0644800 | 0.811762 | 5.952371e-51 | -8.615850e-47 |
Msa0547990 | Msa0644800 | 0.841013 | 6.148013e-58 | -8.615850e-47 |
Msa0556010 | Msa0644800 | 0.807930 | 3.974230e-50 | -8.615850e-47 |
Msa0556060 | Msa0644800 | 0.819204 | 1.312905e-52 | -8.615850e-47 |
Msa0581110 | Msa0644800 | 0.847113 | 1.420322e-59 | -8.615850e-47 |
Msa0582480 | Msa0644800 | 0.811210 | 7.843980e-51 | -8.615850e-47 |
Msa0586220 | Msa0644800 | 0.801758 | 7.742618e-49 | -8.615850e-47 |
Msa0590640 | Msa0644800 | 0.802495 | 5.459319e-49 | -8.615850e-47 |
Msa0597770 | Msa0644800 | 0.820992 | 5.117216e-53 | -8.615850e-47 |
Msa0601530 | Msa0644800 | 0.937983 | 1.423016e-98 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0644800 | MtrunA17_Chr4g0026701 | 97.967 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1001 |
Msa0644800 | MtrunA17_Chr2g0321181 | 72.041 | 490 | 137 | 0 | 3 | 492 | 2 | 491 | 0.0 | 764 |
Msa0644800 | MtrunA17_Chr2g0321201 | 68.980 | 490 | 151 | 1 | 3 | 492 | 4 | 492 | 0.0 | 729 |
Msa0644800 | MtrunA17_Chr4g0026691 | 68.367 | 490 | 155 | 0 | 3 | 492 | 2 | 491 | 0.0 | 726 |
Msa0644800 | MtrunA17_Chr4g0026711 | 47.967 | 492 | 252 | 2 | 5 | 492 | 4 | 495 | 1.68e-170 | 489 |
Msa0644800 | MtrunA17_Chr4g0026771 | 46.721 | 488 | 254 | 4 | 10 | 492 | 6 | 492 | 1.70e-160 | 464 |
Msa0644800 | MtrunA17_Chr6g0465391 | 46.450 | 493 | 227 | 5 | 3 | 492 | 2 | 460 | 2.77e-154 | 447 |
Msa0644800 | MtrunA17_Chr1g0176054 | 39.279 | 499 | 292 | 6 | 1 | 492 | 114 | 608 | 4.26e-123 | 372 |
Msa0644800 | MtrunA17_Chr5g0419501 | 39.348 | 399 | 185 | 4 | 4 | 399 | 3 | 347 | 8.35e-95 | 291 |
Msa0644800 | MtrunA17_Chr4g0026891 | 49.327 | 223 | 109 | 2 | 10 | 228 | 6 | 228 | 5.76e-69 | 222 |
Msa0644800 | MtrunA17_Chr5g0431251 | 49.231 | 130 | 66 | 0 | 181 | 310 | 1 | 130 | 2.48e-42 | 147 |
Msa0644800 | MtrunA17_Chr4g0026911 | 41.530 | 183 | 103 | 4 | 310 | 489 | 3 | 184 | 2.99e-41 | 146 |
Msa0644800 | MtrunA17_Chr5g0431241 | 53.968 | 126 | 56 | 1 | 5 | 130 | 4 | 127 | 1.65e-40 | 142 |
Msa0644800 | MtrunA17_Chr5g0431281 | 39.785 | 186 | 106 | 3 | 310 | 492 | 28 | 210 | 9.44e-39 | 140 |
Msa0644800 | MtrunA17_Chr6g0465381 | 44.898 | 147 | 79 | 1 | 244 | 388 | 1 | 147 | 7.96e-31 | 117 |
Msa0644800 | MtrunA17_Chr5g0419491 | 46.809 | 94 | 50 | 0 | 399 | 492 | 7 | 100 | 1.04e-23 | 95.5 |
Msa0644800 | MtrunA17_Chr4g0026901 | 66.667 | 57 | 19 | 0 | 228 | 284 | 16 | 72 | 9.26e-23 | 92.0 |
Msa0644800 | MtrunA17_Chr5g0431271 | 56.716 | 67 | 29 | 0 | 244 | 310 | 1 | 67 | 1.57e-21 | 90.1 |
Msa0644800 | MtrunA17_Chr5g0431261 | 35.556 | 90 | 58 | 0 | 310 | 399 | 3 | 92 | 1.04e-15 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0644800 | AT4G33790.1 | 58.642 | 486 | 200 | 1 | 6 | 491 | 9 | 493 | 0.0 | 619 |
Msa0644800 | AT3G44540.1 | 54.321 | 486 | 220 | 2 | 9 | 492 | 7 | 492 | 0.0 | 554 |
Msa0644800 | AT5G22500.1 | 52.263 | 486 | 228 | 3 | 9 | 492 | 7 | 490 | 0.0 | 543 |
Msa0644800 | AT3G44550.1 | 52.449 | 490 | 226 | 4 | 9 | 492 | 7 | 495 | 0.0 | 525 |
Msa0644800 | AT3G44560.1 | 51.318 | 493 | 233 | 4 | 6 | 492 | 4 | 495 | 2.10e-175 | 502 |
Msa0644800 | AT4G33790.2 | 58.530 | 381 | 157 | 1 | 111 | 491 | 1 | 380 | 2.33e-173 | 493 |
Msa0644800 | AT3G44560.3 | 52.834 | 441 | 204 | 3 | 6 | 443 | 4 | 443 | 1.19e-159 | 461 |
Msa0644800 | AT5G22500.2 | 54.592 | 392 | 175 | 2 | 9 | 399 | 7 | 396 | 3.24e-159 | 457 |
Msa0644800 | AT3G44560.2 | 54.135 | 399 | 179 | 3 | 6 | 401 | 4 | 401 | 5.14e-148 | 429 |
Msa0644800 | AT3G44550.2 | 51.421 | 387 | 182 | 3 | 111 | 492 | 1 | 386 | 2.19e-140 | 409 |
Msa0644800 | AT3G44540.2 | 58.689 | 305 | 125 | 1 | 9 | 312 | 7 | 311 | 3.88e-130 | 380 |
Msa0644800 | AT3G44540.3 | 58.689 | 305 | 125 | 1 | 9 | 312 | 7 | 311 | 3.88e-130 | 380 |
Msa0644800 | AT5G22420.4 | 50.959 | 365 | 174 | 4 | 116 | 479 | 6 | 366 | 9.90e-130 | 381 |
Msa0644800 | AT3G11980.1 | 40.361 | 498 | 277 | 8 | 7 | 492 | 124 | 613 | 2.07e-125 | 379 |
Msa0644800 | AT5G22420.1 | 48.257 | 373 | 188 | 4 | 108 | 479 | 34 | 402 | 1.21e-122 | 365 |
Msa0644800 | AT5G22420.1 | 62.000 | 50 | 19 | 0 | 9 | 58 | 7 | 56 | 4.53e-13 | 71.2 |
Msa0644800 | AT5G22420.3 | 50.284 | 352 | 170 | 4 | 129 | 479 | 3 | 350 | 2.04e-122 | 362 |
Msa0644800 | AT5G22420.6 | 50.284 | 352 | 170 | 4 | 129 | 479 | 3 | 350 | 2.04e-122 | 362 |
Msa0644800 | AT5G22420.5 | 48.734 | 316 | 157 | 4 | 165 | 479 | 4 | 315 | 2.73e-103 | 312 |
Msa0644800 | AT3G56700.2 | 36.646 | 483 | 285 | 7 | 7 | 488 | 77 | 539 | 4.56e-103 | 319 |
Msa0644800 | AT5G22420.2 | 48.000 | 300 | 151 | 4 | 181 | 479 | 1 | 296 | 7.78e-96 | 292 |
Msa0644800 | AT5G22420.7 | 48.000 | 300 | 151 | 4 | 181 | 479 | 1 | 296 | 7.78e-96 | 292 |
Msa0644800 | AT3G56700.1 | 34.990 | 483 | 272 | 8 | 7 | 488 | 77 | 518 | 7.89e-92 | 289 |
Find 101 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGTTACTTGCTTCCTTTAA+AGG | 0.098124 | 4_3:+49161722 | Msa0644800:CDS |
AGAAATTGAATAACCTTTAA+AGG | 0.182202 | 4_3:-49161735 | None:intergenic |
CAACTTGGTGTTTCACTAAA+TGG | 0.185971 | 4_3:+49160277 | Msa0644800:CDS |
TAAAATTGCCATGAAGGATT+TGG | 0.220004 | 4_3:+49160390 | Msa0644800:CDS |
TGCGGTTGGTTGAACTTTAC+AGG | 0.263042 | 4_3:+49162327 | Msa0644800:CDS |
TTTCTCTCTATATATATATT+TGG | 0.267188 | 4_3:+49156166 | None:intergenic |
ATGCTTCCTTGCAGACTTAG+AGG | 0.301520 | 4_3:+49160902 | Msa0644800:CDS |
TTCATGAACATTCATATTCC+TGG | 0.304377 | 4_3:+49162646 | Msa0644800:CDS |
TTCCATTCCCAAATCCTTCA+TGG | 0.309189 | 4_3:-49160398 | None:intergenic |
CCAAGAAAATTTCAATTTGA+AGG | 0.310827 | 4_3:+49159131 | Msa0644800:CDS |
TTTCCACCAATGGATCAATT+TGG | 0.317863 | 4_3:+49156285 | Msa0644800:exon |
GACAGTTTAATTGTTGCATA+TGG | 0.320149 | 4_3:+49160864 | Msa0644800:CDS |
GCTAGAGAGATTAATAATAT+TGG | 0.323863 | 4_3:+49162732 | Msa0644800:three_prime_UTR |
TGCAACAATTAAACTGTCTA+TGG | 0.329367 | 4_3:-49160859 | None:intergenic |
CCTTGAGCATAAGAATGTTT+TGG | 0.340479 | 4_3:+49156323 | Msa0644800:CDS |
GGTAACTTTGCCAACTTTGA+TGG | 0.345674 | 4_3:-49161658 | None:intergenic |
AACGAATGTACATGTATCTT+TGG | 0.350065 | 4_3:-49161704 | None:intergenic |
AAAATTGCCATGAAGGATTT+GGG | 0.357512 | 4_3:+49160391 | Msa0644800:CDS |
GCATTGGGTTTAAATACATT+TGG | 0.366725 | 4_3:+49159370 | Msa0644800:CDS |
AGATAAAGTTTCTTCACATT+TGG | 0.367398 | 4_3:-49156522 | None:intergenic |
CAGAATATAGTTTCACTTGA+AGG | 0.368930 | 4_3:-49162683 | None:intergenic |
CAAAGAACCTTTCCCTGGTT+GGG | 0.394468 | 4_3:+49160699 | Msa0644800:CDS |
CTTCCTTCCTTGTCAAAACA+TGG | 0.404754 | 4_3:-49161633 | None:intergenic |
GTATAACTCTTGAAGTAGAT+TGG | 0.417054 | 4_3:-49159157 | None:intergenic |
AGTTGGCAAAGTTACCGTAT+TGG | 0.425068 | 4_3:+49161665 | Msa0644800:CDS |
TAAGTGCTGGTAATGATTGT+AGG | 0.428342 | 4_3:-49160676 | None:intergenic |
GTGCTTGTCCACGTATCAAC+AGG | 0.430498 | 4_3:+49159439 | Msa0644800:CDS |
GAAGCAGATCCCTGCTGATA+TGG | 0.433499 | 4_3:+49161467 | Msa0644800:intron |
TTAATTGTTGCATATGGTAA+AGG | 0.436186 | 4_3:+49160870 | Msa0644800:CDS |
CAACCAACCGCATCACAGTA+TGG | 0.442539 | 4_3:-49162316 | None:intergenic |
AAGGAATATTTGACAATGCC+AGG | 0.451920 | 4_3:-49162664 | None:intergenic |
CCTTTCCCTGGTTGGGTCGA+AGG | 0.461087 | 4_3:+49160706 | Msa0644800:CDS |
AGGCCCTATGTGTTCTTCAA+TGG | 0.461502 | 4_3:+49162347 | Msa0644800:CDS |
ATCACGTGGGTTCATCTGTT+GGG | 0.467939 | 4_3:+49161553 | Msa0644800:CDS |
TTTGTAAAGACATATGTGTT+TGG | 0.467992 | 4_3:-49160592 | None:intergenic |
TCAGAGCAAAATTATATGGT+TGG | 0.482019 | 4_3:+49160569 | Msa0644800:intron |
CTTACTCCTTCGACCCAACC+AGG | 0.485945 | 4_3:-49160712 | None:intergenic |
TATCACGTGGGTTCATCTGT+TGG | 0.489042 | 4_3:+49161552 | Msa0644800:CDS |
CTGGTTGGGTCGAAGGAGTA+AGG | 0.490574 | 4_3:+49160713 | Msa0644800:CDS |
AGTGAAACACCAAGTTGGTA+TGG | 0.494139 | 4_3:-49160271 | None:intergenic |
TGAGGAAAAGAGAGTAGTTG+AGG | 0.494819 | 4_3:+49160321 | Msa0644800:CDS |
GCATTCACCACCATATCAGC+AGG | 0.497234 | 4_3:-49161477 | None:intergenic |
GGATACTAAAATTGCCATGA+AGG | 0.498148 | 4_3:+49160384 | Msa0644800:CDS |
ACAAAGAACCTTTCCCTGGT+TGG | 0.498389 | 4_3:+49160698 | Msa0644800:CDS |
GAAAGGTTCTTTGTAAGTGC+TGG | 0.505594 | 4_3:-49160689 | None:intergenic |
TGCCATGAAGGATTTGGGAA+TGG | 0.510799 | 4_3:+49160396 | Msa0644800:CDS |
AATGCTAGTGGGAACTATGA+AGG | 0.527078 | 4_3:+49160627 | Msa0644800:CDS |
TATGTCTTTACAAAGGCAAT+GGG | 0.529172 | 4_3:+49160601 | Msa0644800:CDS |
GGACTTGTTCAAATTGCTGA+AGG | 0.533109 | 4_3:+49159041 | Msa0644800:CDS |
ACAAGAGGGAGCTACTGAAA+AGG | 0.533743 | 4_3:+49160363 | Msa0644800:CDS |
GAAGGAAGAGCCATCAAAGT+TGG | 0.538912 | 4_3:+49161648 | Msa0644800:CDS |
ATACTGCCAAATTGATCCAT+TGG | 0.540433 | 4_3:-49156291 | None:intergenic |
CTAAGACTCTCATATCTCAC+TGG | 0.540860 | 4_3:-49161579 | None:intergenic |
TGCAGATATGATGTAGCATT+GGG | 0.544440 | 4_3:+49159355 | Msa0644800:intron |
AAAGAGAGTTACTCTTTGCA+AGG | 0.545203 | 4_3:-49156365 | None:intergenic |
ACTTACAAAGAACCTTTCCC+TGG | 0.545331 | 4_3:+49160694 | Msa0644800:CDS |
CCAAAACATTCTTATGCTCA+AGG | 0.551300 | 4_3:-49156323 | None:intergenic |
AGAGAGATTAATAATATTGG+TGG | 0.552498 | 4_3:+49162735 | Msa0644800:three_prime_UTR |
CTGCCAAATTGATCCATTGG+TGG | 0.553161 | 4_3:-49156288 | None:intergenic |
AAGACAAAGTGGAGTAGAGA+TGG | 0.553343 | 4_3:+49162579 | Msa0644800:CDS |
ATGCAGATATGATGTAGCAT+TGG | 0.559269 | 4_3:+49159354 | Msa0644800:intron |
TTTAAACTTCTTATTACGTG+TGG | 0.563068 | 4_3:+49162777 | Msa0644800:three_prime_UTR |
ATTGAACATGCTTCAACAAG+AGG | 0.567383 | 4_3:+49160348 | Msa0644800:CDS |
GAATGCAATGCTAGTGGCCA+TGG | 0.569856 | 4_3:+49161494 | Msa0644800:CDS |
CAAATAGCAGCAAGACAAAG+TGG | 0.573597 | 4_3:+49162568 | Msa0644800:CDS |
CAACAACTAACTTTGATGAA+AGG | 0.576712 | 4_3:+49159211 | Msa0644800:CDS |
ATATGTCTTTACAAAGGCAA+TGG | 0.586877 | 4_3:+49160600 | Msa0644800:CDS |
ACGCCATTGAAGAACACATA+GGG | 0.595025 | 4_3:-49162350 | None:intergenic |
GAGAGGAGGACTGATAGTAG+AGG | 0.600345 | 4_3:+49160246 | Msa0644800:CDS |
GGCAATGGGAGAAATGCTAG+TGG | 0.600756 | 4_3:+49160615 | Msa0644800:CDS |
CATTTAGTGAAACACCAAGT+TGG | 0.601093 | 4_3:-49160276 | None:intergenic |
TGAAGGATTTGGGAATGGAA+AGG | 0.604642 | 4_3:+49160401 | Msa0644800:CDS |
CCTTCGACCCAACCAGGGAA+AGG | 0.605631 | 4_3:-49160706 | None:intergenic |
TTAAATGTAGCATACGTATG+TGG | 0.610970 | 4_3:+49160220 | Msa0644800:intron |
AAACTGCCTCTAAGTCTGCA+AGG | 0.617704 | 4_3:-49160908 | None:intergenic |
AAATTGCTGAAGGAAAATCA+TGG | 0.619305 | 4_3:+49159051 | Msa0644800:CDS |
GTTTCACTAAATGGAGTGCA+AGG | 0.619534 | 4_3:+49160286 | Msa0644800:CDS |
AATACAAACCTGTTGATACG+TGG | 0.632502 | 4_3:-49159447 | None:intergenic |
TGTAGGTCTCACAATAACAA+TGG | 0.633502 | 4_3:-49160659 | None:intergenic |
TTACTCCTTCGACCCAACCA+GGG | 0.637146 | 4_3:-49160711 | None:intergenic |
GCATACGTATGTGGAGAGAG+AGG | 0.637651 | 4_3:+49160229 | Msa0644800:intron |
CACGCCATTGAAGAACACAT+AGG | 0.641905 | 4_3:-49162351 | None:intergenic |
TGATGATAGCATATATCACG+TGG | 0.642564 | 4_3:+49161539 | Msa0644800:CDS |
TTGAACATGCTTCAACAAGA+GGG | 0.645462 | 4_3:+49160349 | Msa0644800:CDS |
GGTCCATACTGTGATGCGGT+TGG | 0.646323 | 4_3:+49162313 | Msa0644800:CDS |
CACTAGAAGACTGCACAATG+AGG | 0.647867 | 4_3:+49156575 | Msa0644800:CDS |
AATATGTACTTTGAAAATAG+CGG | 0.651662 | 4_3:-49162274 | None:intergenic |
GCAAGGACTAGACATTGATG+AGG | 0.656577 | 4_3:+49160303 | Msa0644800:CDS |
TTGATTTGCATGACTCACCA+TGG | 0.657844 | 4_3:-49161511 | None:intergenic |
GTAGAGGATCCATACCAACT+TGG | 0.659399 | 4_3:+49160262 | Msa0644800:CDS |
TACGTATGTGGAGAGAGAGG+AGG | 0.668461 | 4_3:+49160232 | Msa0644800:CDS |
AAACACATATGTCTTTACAA+AGG | 0.671076 | 4_3:+49160594 | Msa0644800:CDS |
GCAGATCCCTGCTGATATGG+TGG | 0.671477 | 4_3:+49161470 | Msa0644800:intron |
AAAAGTGACTCTAGTGCCTG+GGG | 0.681356 | 4_3:+49159101 | Msa0644800:CDS |
GCAATGGGAGAAATGCTAGT+GGG | 0.681775 | 4_3:+49160616 | Msa0644800:CDS |
TGATATATGCTATCATCACA+AGG | 0.681859 | 4_3:-49161534 | None:intergenic |
CATTCACCACCATATCAGCA+GGG | 0.685104 | 4_3:-49161476 | None:intergenic |
GGAAGGTCCATACTGTGATG+CGG | 0.690975 | 4_3:+49162309 | Msa0644800:CDS |
GGTGGTGAATGCAATGCTAG+TGG | 0.712141 | 4_3:+49161488 | Msa0644800:CDS |
GATGATAGCATATATCACGT+GGG | 0.729775 | 4_3:+49161540 | Msa0644800:CDS |
ATACGTGGACAAGCACCCTG+AGG | 0.756197 | 4_3:-49159432 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAATATATATTT+AGG | - | chr4_3:49158834-49158853 | None:intergenic | 0.0% |
!! | TATATATATATATATAATAT+TGG | + | chr4_3:49159566-49159585 | Msa0644800:intron | 0.0% |
!!! | TATACACAAATAATTTTTTT+TGG | - | chr4_3:49156657-49156676 | None:intergenic | 10.0% |
!! | AAAAAAATTATTTGTGTATA+AGG | + | chr4_3:49156657-49156676 | Msa0644800:intron | 10.0% |
!!! | TAGATTTTTATGTAATTTTA+CGG | - | chr4_3:49156981-49157000 | None:intergenic | 10.0% |
!!! | TTTTAGTTAAATATGTTAAT+TGG | - | chr4_3:49157525-49157544 | None:intergenic | 10.0% |
!!! | AAAATTGTATATTTTCAAAT+GGG | - | chr4_3:49157630-49157649 | None:intergenic | 10.0% |
!! | TGTATATTAATAGAAAAATA+CGG | - | chr4_3:49157670-49157689 | None:intergenic | 10.0% |
!! | AAATATCTTGAATAATATAT+TGG | - | chr4_3:49157773-49157792 | None:intergenic | 10.0% |
!! | TAAAAAATTTCTAAATTTGA+TGG | - | chr4_3:49159809-49159828 | None:intergenic | 10.0% |
!! | ATTAACTACAATAAAAAATT+TGG | - | chr4_3:49160750-49160769 | None:intergenic | 10.0% |
!!! | AAAAATTAAACTTGTTTTTT+AGG | + | chr4_3:49162090-49162109 | Msa0644800:intron | 10.0% |
!! | GTTTATTAAATTTGTGTATA+AGG | + | chr4_3:49156625-49156644 | Msa0644800:intron | 15.0% |
!! | AAATCACAAAAATATCTTAT+CGG | + | chr4_3:49157152-49157171 | Msa0644800:intron | 15.0% |
!!! | AACTTTTATGATGTAAATTT+AGG | + | chr4_3:49157458-49157477 | Msa0644800:intron | 15.0% |
!!! | CAAAATTGTATATTTTCAAA+TGG | - | chr4_3:49157631-49157650 | None:intergenic | 15.0% |
!! | AATTCATGAAATTAATTATG+AGG | + | chr4_3:49158302-49158321 | Msa0644800:intron | 15.0% |
!! | TGAATGAAAATTATAATTAG+TGG | - | chr4_3:49158378-49158397 | None:intergenic | 15.0% |
!! | AAGTTATCTTAAATATAAGA+CGG | + | chr4_3:49158440-49158459 | Msa0644800:intron | 15.0% |
!!! | GTTATATTAGTCTTTTTTTA+AGG | + | chr4_3:49159494-49159513 | Msa0644800:intron | 15.0% |
!!! | AATTTGATGGATATAAATAT+AGG | - | chr4_3:49159796-49159815 | None:intergenic | 15.0% |
!!! | TATTTTATTTTATTGGTTCT+AGG | - | chr4_3:49159977-49159996 | None:intergenic | 15.0% |
!! | AGAACCAATAAAATAAAATA+TGG | + | chr4_3:49159977-49159996 | Msa0644800:intron | 15.0% |
!! | TTAATTAATTTCAATAAGCA+TGG | - | chr4_3:49160182-49160201 | None:intergenic | 15.0% |
!!! | TTTGTTGTTAATTTGTTTAT+TGG | - | chr4_3:49160515-49160534 | None:intergenic | 15.0% |
!!! | TTTAGTTTATCTTCTTTAAA+AGG | + | chr4_3:49160950-49160969 | Msa0644800:intron | 15.0% |
!!! | ATATTTTATCCAAAGAATTT+GGG | + | chr4_3:49161093-49161112 | Msa0644800:intron | 15.0% |
!! | AGGTATTTAAAAAATTAACA+TGG | - | chr4_3:49161187-49161206 | None:intergenic | 15.0% |
!! | ATCTTCTTGAATTAAAAAAA+AGG | + | chr4_3:49161353-49161372 | Msa0644800:intron | 15.0% |
!! | TCTTCTTGAATTAAAAAAAA+GGG | + | chr4_3:49161354-49161373 | Msa0644800:intron | 15.0% |
!!! | TTTTTTCTAATACACAATTT+TGG | - | chr4_3:49161381-49161400 | None:intergenic | 15.0% |
!! | ACATAACTAAATGTATAATT+AGG | + | chr4_3:49161406-49161425 | Msa0644800:intron | 15.0% |
!!! | TAATTAAATCAATTTTGTCT+AGG | - | chr4_3:49161432-49161451 | None:intergenic | 15.0% |
!! | AAATAATTATGTGTTAACTT+TGG | - | chr4_3:49161823-49161842 | None:intergenic | 15.0% |
!!! | ATTAATTTGTGTTTTATAAC+AGG | + | chr4_3:49162223-49162242 | Msa0644800:intron | 15.0% |
!!! | TTAATTTGTGTTTTATAACA+GGG | + | chr4_3:49162224-49162243 | Msa0644800:intron | 15.0% |
!!! | CTATTATTCATTTCAAATTT+TGG | + | chr4_3:49162430-49162449 | Msa0644800:intron | 15.0% |
!! | AATTATTTGTGTATAAGGTA+CGG | + | chr4_3:49156662-49156681 | Msa0644800:intron | 20.0% |
!!! | ACTTAATAAATTGAGAGTTT+TGG | - | chr4_3:49156760-49156779 | None:intergenic | 20.0% |
!! | GTAATTAATGATGATTATGT+TGG | + | chr4_3:49156790-49156809 | Msa0644800:intron | 20.0% |
!!! | AAAACTCTTAACATTCTTTT+TGG | + | chr4_3:49156953-49156972 | Msa0644800:intron | 20.0% |
!!! | CATGCAATTTATTTTAGTAA+TGG | - | chr4_3:49157325-49157344 | None:intergenic | 20.0% |
!!! | AATGACTACATTCAATTTTT+TGG | + | chr4_3:49157911-49157930 | Msa0644800:intron | 20.0% |
!!! | CTTTTTGAGAATATCATAAT+TGG | + | chr4_3:49158343-49158362 | Msa0644800:intron | 20.0% |
!!! | TTTTCCTCAATAAAAAAAGT+TGG | + | chr4_3:49158470-49158489 | Msa0644800:intron | 20.0% |
!!! | CTTCAAATTGAAATTTTCTT+GGG | - | chr4_3:49159133-49159152 | None:intergenic | 20.0% |
!!! | CCTACCATATTTTATTTTAT+TGG | - | chr4_3:49159984-49160003 | None:intergenic | 20.0% |
!! | CCAATAAAATAAAATATGGT+AGG | + | chr4_3:49159981-49160000 | Msa0644800:intron | 20.0% |
!!! | ATTTTCAGAGCAAAATTATA+TGG | + | chr4_3:49160565-49160584 | Msa0644800:intron | 20.0% |
!! | ATTAAAGGAACACATAATAA+AGG | - | chr4_3:49160785-49160804 | None:intergenic | 20.0% |
!! | ATAAAAAGTGATCAAAATTG+TGG | - | chr4_3:49161028-49161047 | None:intergenic | 20.0% |
!!! | GATATTTTATCCAAAGAATT+TGG | + | chr4_3:49161092-49161111 | Msa0644800:intron | 20.0% |
!! | AGAAATTGAATAACCTTTAA+AGG | - | chr4_3:49161738-49161757 | None:intergenic | 20.0% |
!!! | CAAGTTTAATTTTTTTTCGT+AGG | - | chr4_3:49162084-49162103 | None:intergenic | 20.0% |
!!! | TAATTTGTGTTTTATAACAG+GGG | + | chr4_3:49162225-49162244 | Msa0644800:intron | 20.0% |
!!! | AATATGTACTTTGAAAATAG+CGG | - | chr4_3:49162277-49162296 | None:intergenic | 20.0% |
!! | GTGTATATTTGTAGTTTTTG+TGG | + | chr4_3:49156479-49156498 | Msa0644800:intron | 25.0% |
! | AGATAAAGTTTCTTCACATT+TGG | - | chr4_3:49156525-49156544 | None:intergenic | 25.0% |
! | AGGTATGTATAGACATTAAA+AGG | + | chr4_3:49156595-49156614 | Msa0644800:intron | 25.0% |
! | ATGAGAGGAGTAAAAAAAAA+AGG | - | chr4_3:49156923-49156942 | None:intergenic | 25.0% |
! | TAAGATTAGTACACAAAAGA+CGG | - | chr4_3:49157410-49157429 | None:intergenic | 25.0% |
! | AAGAAGAAAAAAAACCCTAA+TGG | + | chr4_3:49157488-49157507 | Msa0644800:intron | 25.0% |
! | TCAATTGTGTCAAGTATTAT+GGG | + | chr4_3:49157828-49157847 | Msa0644800:intron | 25.0% |
! | TGTAGCAGTCTATTTATTAT+AGG | + | chr4_3:49157885-49157904 | Msa0644800:intron | 25.0% |
!! | TTGATTTTCTCTCTTTTGAT+TGG | + | chr4_3:49158013-49158032 | Msa0644800:intron | 25.0% |
! | GTCAAAAAGTTGTTAGAAAA+TGG | + | chr4_3:49158106-49158125 | Msa0644800:intron | 25.0% |
!!! | GAACGGTAACAATTTTTTAT+AGG | - | chr4_3:49158212-49158231 | None:intergenic | 25.0% |
! | ATGAATTAGATTAGACAAGT+GGG | - | chr4_3:49158289-49158308 | None:intergenic | 25.0% |
!!! | ACTTCCAACTTTTTTTATTG+AGG | - | chr4_3:49158477-49158496 | None:intergenic | 25.0% |
! | GAATAATGCATATATATGCA+GGG | + | chr4_3:49158524-49158543 | Msa0644800:intron | 25.0% |
! | AATAATGCATATATATGCAG+GGG | + | chr4_3:49158525-49158544 | Msa0644800:intron | 25.0% |
! | TACTTGACCAAAAAAAAAGT+TGG | + | chr4_3:49158613-49158632 | Msa0644800:intron | 25.0% |
!!! | GCATTTTCCAACTTTTTTTT+TGG | - | chr4_3:49158623-49158642 | None:intergenic | 25.0% |
! | ATCCTAAAGTATATTTGTGA+TGG | + | chr4_3:49158863-49158882 | Msa0644800:intron | 25.0% |
!! | CCTTCAAATTGAAATTTTCT+TGG | - | chr4_3:49159134-49159153 | None:intergenic | 25.0% |
! | CCAAGAAAATTTCAATTTGA+AGG | + | chr4_3:49159131-49159150 | Msa0644800:CDS | 25.0% |
! | CAAAAATTGTATTAACCTCA+GGG | + | chr4_3:49159417-49159436 | Msa0644800:CDS | 25.0% |
! | TTTGAAAAGCTCTCATTTAT+CGG | + | chr4_3:49159612-49159631 | Msa0644800:intron | 25.0% |
! | AAAGATGCATATTGGAATTT+AGG | - | chr4_3:49159671-49159690 | None:intergenic | 25.0% |
!!! | AGATGAATTTTTCAATTACG+TGG | + | chr4_3:49159832-49159851 | Msa0644800:intron | 25.0% |
! | TGCATCTTAAGATAGTTATT+AGG | + | chr4_3:49159893-49159912 | Msa0644800:intron | 25.0% |
! | CATTTAGTATCAATCAATGT+AGG | + | chr4_3:49160152-49160171 | Msa0644800:intron | 25.0% |
! | TTTGTAAAGACATATGTGTT+TGG | - | chr4_3:49160595-49160614 | None:intergenic | 25.0% |
! | AAACACATATGTCTTTACAA+AGG | + | chr4_3:49160594-49160613 | Msa0644800:CDS | 25.0% |
! | TTAATTGTTGCATATGGTAA+AGG | + | chr4_3:49160870-49160889 | Msa0644800:CDS | 25.0% |
!!! | AGTTGATATTATTACCCTTT+TGG | + | chr4_3:49160982-49161001 | Msa0644800:intron | 25.0% |
! | CAAAAATATGAAGACCAAAA+GGG | - | chr4_3:49160999-49161018 | None:intergenic | 25.0% |
! | TCAAAAATATGAAGACCAAA+AGG | - | chr4_3:49161000-49161019 | None:intergenic | 25.0% |
! | AAAACTTTACCCAAATTCTT+TGG | - | chr4_3:49161105-49161124 | None:intergenic | 25.0% |
!!! | TTGGGTAAAGTTTTGATAAT+AGG | + | chr4_3:49161111-49161130 | Msa0644800:intron | 25.0% |
!!! | GTTTTCTGTTAGTTTATTGT+AGG | - | chr4_3:49161165-49161184 | None:intergenic | 25.0% |
! | AATGATTATGACATATAGGT+AGG | - | chr4_3:49161267-49161286 | None:intergenic | 25.0% |
! | GACAAATGATTATGACATAT+AGG | - | chr4_3:49161271-49161290 | None:intergenic | 25.0% |
!! | GCTATTCATATTTTCCAATA+CGG | - | chr4_3:49161682-49161701 | None:intergenic | 25.0% |
! | TGGAAAAATAGAAGTAATTG+AGG | - | chr4_3:49161764-49161783 | None:intergenic | 25.0% |
!! | GTTTAATTTCGATACATTGT+CGG | - | chr4_3:49161878-49161897 | None:intergenic | 25.0% |
! | ATGTATCGAAATTAAACTCT+AGG | + | chr4_3:49161881-49161900 | Msa0644800:intron | 25.0% |
! | TGTATCGAAATTAAACTCTA+GGG | + | chr4_3:49161882-49161901 | Msa0644800:intron | 25.0% |
! | TTAATAGATAACGAGTACAA+CGG | - | chr4_3:49161917-49161936 | None:intergenic | 25.0% |
! | GTAAGTATTTAAAAGTGGTA+GGG | + | chr4_3:49161999-49162018 | Msa0644800:intron | 25.0% |
! | AATTTAATATGCTAAGATCC+AGG | - | chr4_3:49162031-49162050 | None:intergenic | 25.0% |
! | GCTAGAGAGATTAATAATAT+TGG | + | chr4_3:49162732-49162751 | Msa0644800:three_prime_UTR | 25.0% |
! | AGAGAGATTAATAATATTGG+TGG | + | chr4_3:49162735-49162754 | Msa0644800:three_prime_UTR | 25.0% |
! | TTTAAACTTCTTATTACGTG+TGG | + | chr4_3:49162777-49162796 | Msa0644800:three_prime_UTR | 25.0% |
!! | TACTTTAACTTTTCCACCAA+TGG | + | chr4_3:49156275-49156294 | Msa0644800:exon | 30.0% |
!!! | CATAAGAATGTTTTGGTACT+TGG | + | chr4_3:49156330-49156349 | Msa0644800:CDS | 30.0% |
!! | TTATCTTCTTTTGAGAGCTA+CGG | + | chr4_3:49156539-49156558 | Msa0644800:CDS | 30.0% |
TTATGTTGGTATCTTAAGTG+TGG | + | chr4_3:49156804-49156823 | Msa0644800:intron | 30.0% | |
GTACTATAAGTGAGTAAAGA+TGG | + | chr4_3:49156863-49156882 | Msa0644800:intron | 30.0% | |
! | GAATGTTAAGAGTTTTCTCT+TGG | - | chr4_3:49156949-49156968 | None:intergenic | 30.0% |
TCACAAAAATATCTTATCGG+TGG | + | chr4_3:49157155-49157174 | Msa0644800:intron | 30.0% | |
AAATACGGTCAAAGTAAGTT+AGG | - | chr4_3:49157655-49157674 | None:intergenic | 30.0% | |
! | ATGCATTGACATGCTTAATA+AGG | + | chr4_3:49157805-49157824 | Msa0644800:intron | 30.0% |
GTCAATTGTGTCAAGTATTA+TGG | + | chr4_3:49157827-49157846 | Msa0644800:intron | 30.0% | |
GTGATATTTGTACAACTCTT+TGG | + | chr4_3:49157971-49157990 | Msa0644800:intron | 30.0% | |
!!! | ACCGTTTAAACTGCTATTTT+CGG | - | chr4_3:49158241-49158260 | None:intergenic | 30.0% |
AAAATAGCAGTTTAAACGGT+TGG | + | chr4_3:49158241-49158260 | Msa0644800:intron | 30.0% | |
CATGAATTAGATTAGACAAG+TGG | - | chr4_3:49158290-49158309 | None:intergenic | 30.0% | |
AGAATATCATAATTGGTGAG+TGG | + | chr4_3:49158350-49158369 | Msa0644800:intron | 30.0% | |
GGAATAATGCATATATATGC+AGG | + | chr4_3:49158523-49158542 | Msa0644800:intron | 30.0% | |
!! | ACTCCACTTATTCACTTTTA+AGG | + | chr4_3:49158568-49158587 | Msa0644800:intron | 30.0% |
TCACCTTAAAAGTGAATAAG+TGG | - | chr4_3:49158574-49158593 | None:intergenic | 30.0% | |
TGTGTCTTGAAAAATTCTTG+AGG | - | chr4_3:49158665-49158684 | None:intergenic | 30.0% | |
!!! | AGAATTTTTCAAGACACATG+TGG | + | chr4_3:49158667-49158686 | Msa0644800:intron | 30.0% |
CACCATCACAAATATACTTT+AGG | - | chr4_3:49158868-49158887 | None:intergenic | 30.0% | |
! | TCATATGTAGATTTTGCGAA+AGG | + | chr4_3:49159020-49159039 | Msa0644800:intron | 30.0% |
AAATTGCTGAAGGAAAATCA+TGG | + | chr4_3:49159051-49159070 | Msa0644800:CDS | 30.0% | |
GTATAACTCTTGAAGTAGAT+TGG | - | chr4_3:49159160-49159179 | None:intergenic | 30.0% | |
CAACAACTAACTTTGATGAA+AGG | + | chr4_3:49159211-49159230 | Msa0644800:CDS | 30.0% | |
GCATTGGGTTTAAATACATT+TGG | + | chr4_3:49159370-49159389 | Msa0644800:CDS | 30.0% | |
! | CCTGAGGTTAATACAATTTT+TGG | - | chr4_3:49159419-49159438 | None:intergenic | 30.0% |
CCAAAAATTGTATTAACCTC+AGG | + | chr4_3:49159416-49159435 | Msa0644800:CDS | 30.0% | |
! | AGAGCTTTTCAAACAATCTT+GGG | - | chr4_3:49159605-49159624 | None:intergenic | 30.0% |
! | ATCGGAAAGATAGTTTTTGA+TGG | + | chr4_3:49159630-49159649 | Msa0644800:intron | 30.0% |
! | ATAGTGGAAAAGATGCATAT+TGG | - | chr4_3:49159679-49159698 | None:intergenic | 30.0% |
! | TCTTTTCCACTATAATCTCT+CGG | + | chr4_3:49159686-49159705 | Msa0644800:intron | 30.0% |
!! | TTTTTGAGCTTGAGCAATAT+AGG | + | chr4_3:49159746-49159765 | Msa0644800:intron | 30.0% |
! | GAAAAATAGTTTGTCAGAAG+TGG | - | chr4_3:49159920-49159939 | None:intergenic | 30.0% |
!! | CTATTTTTCGCAATTCAATG+TGG | + | chr4_3:49159931-49159950 | Msa0644800:intron | 30.0% |
CTTGTCTATTACTCCATTTA+AGG | - | chr4_3:49160072-49160091 | None:intergenic | 30.0% | |
GAATACCACAAAAGTTTAGT+TGG | + | chr4_3:49160113-49160132 | Msa0644800:intron | 30.0% | |
!! | TAGTTGGTGAACTTAATATG+TGG | + | chr4_3:49160129-49160148 | Msa0644800:intron | 30.0% |
TTAAATGTAGCATACGTATG+TGG | + | chr4_3:49160220-49160239 | Msa0644800:intron | 30.0% | |
TAAAATTGCCATGAAGGATT+TGG | + | chr4_3:49160390-49160409 | Msa0644800:CDS | 30.0% | |
AAAATTGCCATGAAGGATTT+GGG | + | chr4_3:49160391-49160410 | Msa0644800:CDS | 30.0% | |
TCAGAGCAAAATTATATGGT+TGG | + | chr4_3:49160569-49160588 | Msa0644800:intron | 30.0% | |
ATATGTCTTTACAAAGGCAA+TGG | + | chr4_3:49160600-49160619 | Msa0644800:CDS | 30.0% | |
TATGTCTTTACAAAGGCAAT+GGG | + | chr4_3:49160601-49160620 | Msa0644800:CDS | 30.0% | |
TGCAACAATTAAACTGTCTA+TGG | - | chr4_3:49160862-49160881 | None:intergenic | 30.0% | |
GACAGTTTAATTGTTGCATA+TGG | + | chr4_3:49160864-49160883 | Msa0644800:CDS | 30.0% | |
TTTATTGTAGGAGATGATGT+TGG | - | chr4_3:49161153-49161172 | None:intergenic | 30.0% | |
! | ATATTTTACTTGCACGTCAT+TGG | + | chr4_3:49161297-49161316 | Msa0644800:intron | 30.0% |
!!! | AACGTCACACTTTTTTGAAA+TGG | + | chr4_3:49161323-49161342 | Msa0644800:intron | 30.0% |
!!! | ACGTCACACTTTTTTGAAAT+GGG | + | chr4_3:49161324-49161343 | Msa0644800:intron | 30.0% |
TGATATATGCTATCATCACA+AGG | - | chr4_3:49161537-49161556 | None:intergenic | 30.0% | |
! | CTACAGCTTCAGATATTTTA+CGG | + | chr4_3:49161605-49161624 | Msa0644800:CDS | 30.0% |
AACGAATGTACATGTATCTT+TGG | - | chr4_3:49161707-49161726 | None:intergenic | 30.0% | |
!! | AGTCAATTGTTTTGCATGAA+TGG | - | chr4_3:49161784-49161803 | None:intergenic | 30.0% |
!! | GAAATTAAACTCTAGGGTTT+GGG | + | chr4_3:49161888-49161907 | Msa0644800:intron | 30.0% |
TAATAGATAACGAGTACAAC+GGG | - | chr4_3:49161916-49161935 | None:intergenic | 30.0% | |
GCAACGTAAGTATTTAAAAG+TGG | + | chr4_3:49161994-49162013 | Msa0644800:intron | 30.0% | |
CGTAAGTATTTAAAAGTGGT+AGG | + | chr4_3:49161998-49162017 | Msa0644800:intron | 30.0% | |
TTTCGTAGGTACAATTCATA+CGG | - | chr4_3:49162070-49162089 | None:intergenic | 30.0% | |
!!! | GTACATATTTTGATATCAGC+AGG | + | chr4_3:49162288-49162307 | Msa0644800:CDS | 30.0% |
!!! | ATATTTTGATATCAGCAGGA+AGG | + | chr4_3:49162292-49162311 | Msa0644800:CDS | 30.0% |
TTGACCCAAAAATGATTAAC+TGG | + | chr4_3:49162614-49162633 | Msa0644800:CDS | 30.0% | |
TGACCCAAAAATGATTAACT+GGG | + | chr4_3:49162615-49162634 | Msa0644800:CDS | 30.0% | |
TTCATGAACATTCATATTCC+TGG | + | chr4_3:49162646-49162665 | Msa0644800:CDS | 30.0% | |
CAGAATATAGTTTCACTTGA+AGG | - | chr4_3:49162686-49162705 | None:intergenic | 30.0% | |
TTTCCACCAATGGATCAATT+TGG | + | chr4_3:49156285-49156304 | Msa0644800:exon | 35.0% | |
ATACTGCCAAATTGATCCAT+TGG | - | chr4_3:49156294-49156313 | None:intergenic | 35.0% | |
CCAAAACATTCTTATGCTCA+AGG | - | chr4_3:49156326-49156345 | None:intergenic | 35.0% | |
! | CCTTGAGCATAAGAATGTTT+TGG | + | chr4_3:49156323-49156342 | Msa0644800:CDS | 35.0% |
AAAGAGAGTTACTCTTTGCA+AGG | - | chr4_3:49156368-49156387 | None:intergenic | 35.0% | |
AACACAAGGACAAAAAGAGA+GGG | - | chr4_3:49156709-49156728 | None:intergenic | 35.0% | |
AAACACAAGGACAAAAAGAG+AGG | - | chr4_3:49156710-49156729 | None:intergenic | 35.0% | |
ATGTCTCATGAAGAAACACA+AGG | - | chr4_3:49156723-49156742 | None:intergenic | 35.0% | |
TCCAAATCTACTGTTGTTGT+CGG | + | chr4_3:49157184-49157203 | Msa0644800:intron | 35.0% | |
TCATGCATATGCTCTTTCTT+TGG | + | chr4_3:49157242-49157261 | Msa0644800:intron | 35.0% | |
! | ATGCTCTTTCTTTGGTAACA+TGG | + | chr4_3:49157250-49157269 | Msa0644800:intron | 35.0% |
!! | GTACACAAAAGACGGATTTT+TGG | - | chr4_3:49157402-49157421 | None:intergenic | 35.0% |
!! | TGGTGTCTTTTTCACCATTA+GGG | - | chr4_3:49157505-49157524 | None:intergenic | 35.0% |
!! | TTGGTGTCTTTTTCACCATT+AGG | - | chr4_3:49157506-49157525 | None:intergenic | 35.0% |
TTCAAATGGGTCATCTATTG+CGG | - | chr4_3:49157617-49157636 | None:intergenic | 35.0% | |
TTGTGTCAAGTATTATGGGA+TGG | + | chr4_3:49157832-49157851 | Msa0644800:intron | 35.0% | |
! | ATGGAGGGAGTAACATTTTA+AGG | + | chr4_3:49157851-49157870 | Msa0644800:intron | 35.0% |
!!! | CCGTTTAAACTGCTATTTTC+GGG | - | chr4_3:49158240-49158259 | None:intergenic | 35.0% |
CCCGAAAATAGCAGTTTAAA+CGG | + | chr4_3:49158237-49158256 | Msa0644800:intron | 35.0% | |
!! | TTTTTGGTCAAGTAGCCTAT+CGG | - | chr4_3:49158607-49158626 | None:intergenic | 35.0% |
ATGCAGATATGATGTAGCAT+TGG | + | chr4_3:49159354-49159373 | Msa0644800:intron | 35.0% | |
TGCAGATATGATGTAGCATT+GGG | + | chr4_3:49159355-49159374 | Msa0644800:intron | 35.0% | |
AATACAAACCTGTTGATACG+TGG | - | chr4_3:49159450-49159469 | None:intergenic | 35.0% | |
! | GAGAGCTTTTCAAACAATCT+TGG | - | chr4_3:49159606-49159625 | None:intergenic | 35.0% |
TAGAATCCGAGAGATTATAG+TGG | - | chr4_3:49159695-49159714 | None:intergenic | 35.0% | |
ACTATAATCTCTCGGATTCT+AGG | + | chr4_3:49159694-49159713 | Msa0644800:intron | 35.0% | |
CTACAAGTGTACAAGAAAAG+TGG | + | chr4_3:49159869-49159888 | Msa0644800:intron | 35.0% | |
TTATGGTCATATGTTGAGCT+TGG | - | chr4_3:49160035-49160054 | None:intergenic | 35.0% | |
AGGTATGTGTTGCAGTATTA+TGG | - | chr4_3:49160052-49160071 | None:intergenic | 35.0% | |
ACTGCAACACATACCTTAAA+TGG | + | chr4_3:49160056-49160075 | Msa0644800:intron | 35.0% | |
! | GTTCACCAACTAAACTTTTG+TGG | - | chr4_3:49160121-49160140 | None:intergenic | 35.0% |
CATTTAGTGAAACACCAAGT+TGG | - | chr4_3:49160279-49160298 | None:intergenic | 35.0% | |
!! | CAACTTGGTGTTTCACTAAA+TGG | + | chr4_3:49160277-49160296 | Msa0644800:CDS | 35.0% |
ATTGAACATGCTTCAACAAG+AGG | + | chr4_3:49160348-49160367 | Msa0644800:CDS | 35.0% | |
TTGAACATGCTTCAACAAGA+GGG | + | chr4_3:49160349-49160368 | Msa0644800:CDS | 35.0% | |
GGATACTAAAATTGCCATGA+AGG | + | chr4_3:49160384-49160403 | Msa0644800:CDS | 35.0% | |
TGTAGGTCTCACAATAACAA+TGG | - | chr4_3:49160662-49160681 | None:intergenic | 35.0% | |
!! | TAAGTGCTGGTAATGATTGT+AGG | - | chr4_3:49160679-49160698 | None:intergenic | 35.0% |
TAGGTGGATGGGTATATTAT+AGG | - | chr4_3:49161248-49161267 | None:intergenic | 35.0% | |
GATTATGACATATAGGTAGG+TGG | - | chr4_3:49161264-49161283 | None:intergenic | 35.0% | |
!!! | CGTCACACTTTTTTGAAATG+GGG | + | chr4_3:49161325-49161344 | Msa0644800:intron | 35.0% |
TGATGATAGCATATATCACG+TGG | + | chr4_3:49161539-49161558 | Msa0644800:CDS | 35.0% | |
GATGATAGCATATATCACGT+GGG | + | chr4_3:49161540-49161559 | Msa0644800:CDS | 35.0% | |
!!! | AAACCATGTTTTGACAAGGA+AGG | + | chr4_3:49161630-49161649 | Msa0644800:CDS | 35.0% |
TCGTTACTTGCTTCCTTTAA+AGG | + | chr4_3:49161722-49161741 | Msa0644800:CDS | 35.0% | |
!! | CGAAATTAAACTCTAGGGTT+TGG | + | chr4_3:49161887-49161906 | Msa0644800:intron | 35.0% |
!! | CCTCCCAGTTAATCATTTTT+GGG | - | chr4_3:49162621-49162640 | None:intergenic | 35.0% |
! | TCCTCCCAGTTAATCATTTT+TGG | - | chr4_3:49162622-49162641 | None:intergenic | 35.0% |
AAGGAATATTTGACAATGCC+AGG | - | chr4_3:49162667-49162686 | None:intergenic | 35.0% | |
GTGTGGTAAATATCTCACGT+TGG | + | chr4_3:49156821-49156840 | Msa0644800:intron | 40.0% | |
GGTAAATATCTCACGTTGGA+TGG | + | chr4_3:49156825-49156844 | Msa0644800:intron | 40.0% | |
! | GTTTTCTCTTGGATCATGAG+AGG | - | chr4_3:49156938-49156957 | None:intergenic | 40.0% |
ACCGACAACAACAGTAGATT+TGG | - | chr4_3:49157188-49157207 | None:intergenic | 40.0% | |
CTCACCAATGTCATGTAGAA+CGG | + | chr4_3:49157215-49157234 | Msa0644800:intron | 40.0% | |
TGTCAAGTATTATGGGATGG+AGG | + | chr4_3:49157835-49157854 | Msa0644800:intron | 40.0% | |
GTCAAGTATTATGGGATGGA+GGG | + | chr4_3:49157836-49157855 | Msa0644800:intron | 40.0% | |
!! | GCTATTTTCGGGAAGATGAA+CGG | - | chr4_3:49158229-49158248 | None:intergenic | 40.0% |
ATGCATATATATGCAGGGGT+CGG | + | chr4_3:49158529-49158548 | Msa0644800:intron | 40.0% | |
! | AAGTGAATAAGTGGAGTGTC+CGG | - | chr4_3:49158565-49158584 | None:intergenic | 40.0% |
TGTGGCTGAAAAATAGGAAG+TGG | - | chr4_3:49158720-49158739 | None:intergenic | 40.0% | |
! | AGGAAGTGTGGCTGAAAAAT+AGG | - | chr4_3:49158726-49158745 | None:intergenic | 40.0% |
GCACTATTTGCCACAATTCA+AGG | - | chr4_3:49158746-49158765 | None:intergenic | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | + | chr4_3:49158754-49158773 | Msa0644800:intron | 40.0% | |
GAGGTGGGTGTGAAAATTAA+TGG | - | chr4_3:49158915-49158934 | None:intergenic | 40.0% | |
! | GGACTTGTTCAAATTGCTGA+AGG | + | chr4_3:49159041-49159060 | Msa0644800:CDS | 40.0% |
AAAAAGTGACTCTAGTGCCT+GGG | + | chr4_3:49159100-49159119 | Msa0644800:CDS | 40.0% | |
!!! | CTCGGATTCTAGGTTTTGTT+AGG | + | chr4_3:49159704-49159723 | Msa0644800:intron | 40.0% |
GGTTAATCTTACGTGCTAGT+AGG | - | chr4_3:49160007-49160026 | None:intergenic | 40.0% | |
! | CATATGTTGAGCTTGGTTCT+AGG | - | chr4_3:49160028-49160047 | None:intergenic | 40.0% |
!! | AGTGAAACACCAAGTTGGTA+TGG | - | chr4_3:49160274-49160293 | None:intergenic | 40.0% |
GTTTCACTAAATGGAGTGCA+AGG | + | chr4_3:49160286-49160305 | Msa0644800:CDS | 40.0% | |
TGAGGAAAAGAGAGTAGTTG+AGG | + | chr4_3:49160321-49160340 | Msa0644800:CDS | 40.0% | |
TTCCATTCCCAAATCCTTCA+TGG | - | chr4_3:49160401-49160420 | None:intergenic | 40.0% | |
TGAAGGATTTGGGAATGGAA+AGG | + | chr4_3:49160401-49160420 | Msa0644800:CDS | 40.0% | |
AATGCTAGTGGGAACTATGA+AGG | + | chr4_3:49160627-49160646 | Msa0644800:CDS | 40.0% | |
GAAAGGTTCTTTGTAAGTGC+TGG | - | chr4_3:49160692-49160711 | None:intergenic | 40.0% | |
ACTTACAAAGAACCTTTCCC+TGG | + | chr4_3:49160694-49160713 | Msa0644800:CDS | 40.0% | |
! | CTTAGAGGCAGTTTTTGATG+TGG | + | chr4_3:49160917-49160936 | Msa0644800:CDS | 40.0% |
! | CAGTTTTTGATGTGGTGAGA+AGG | + | chr4_3:49160925-49160944 | Msa0644800:intron | 40.0% |
TGACATATAGGTAGGTGGAT+GGG | - | chr4_3:49161259-49161278 | None:intergenic | 40.0% | |
ATGACATATAGGTAGGTGGA+TGG | - | chr4_3:49161260-49161279 | None:intergenic | 40.0% | |
!! | TTGATTTGCATGACTCACCA+TGG | - | chr4_3:49161514-49161533 | None:intergenic | 40.0% |
CTAAGACTCTCATATCTCAC+TGG | - | chr4_3:49161582-49161601 | None:intergenic | 40.0% | |
!!! | GGCAAAACCATGTTTTGACA+AGG | + | chr4_3:49161626-49161645 | Msa0644800:CDS | 40.0% |
CTTCCTTCCTTGTCAAAACA+TGG | - | chr4_3:49161636-49161655 | None:intergenic | 40.0% | |
GGTAACTTTGCCAACTTTGA+TGG | - | chr4_3:49161661-49161680 | None:intergenic | 40.0% | |
AGTTGGCAAAGTTACCGTAT+TGG | + | chr4_3:49161665-49161684 | Msa0644800:CDS | 40.0% | |
TTAAGCGTATACCCGCAAAA+CGG | + | chr4_3:49161967-49161986 | Msa0644800:intron | 40.0% | |
! | AAAGTGGTAGGGTTTTTACC+TGG | + | chr4_3:49162010-49162029 | Msa0644800:intron | 40.0% |
ACGCCATTGAAGAACACATA+GGG | - | chr4_3:49162353-49162372 | None:intergenic | 40.0% | |
CAAATAGCAGCAAGACAAAG+TGG | + | chr4_3:49162568-49162587 | Msa0644800:CDS | 40.0% | |
AAGACAAAGTGGAGTAGAGA+TGG | + | chr4_3:49162579-49162598 | Msa0644800:CDS | 40.0% | |
CCCAAAAATGATTAACTGGG+AGG | + | chr4_3:49162618-49162637 | Msa0644800:CDS | 40.0% | |
CTGCCAAATTGATCCATTGG+TGG | - | chr4_3:49156291-49156310 | None:intergenic | 45.0% | |
CACTAGAAGACTGCACAATG+AGG | + | chr4_3:49156575-49156594 | Msa0644800:CDS | 45.0% | |
GTGACAAACGTTACGTCTCT+TGG | + | chr4_3:49157115-49157134 | Msa0644800:intron | 45.0% | |
CGTTCTACATGACATTGGTG+AGG | - | chr4_3:49157217-49157236 | None:intergenic | 45.0% | |
ACCAATGTCATGTAGAACGG+TGG | + | chr4_3:49157218-49157237 | Msa0644800:intron | 45.0% | |
TCCACCGTTCTACATGACAT+TGG | - | chr4_3:49157222-49157241 | None:intergenic | 45.0% | |
ATGGGTCATCTATTGCGGAA+CGG | - | chr4_3:49157612-49157631 | None:intergenic | 45.0% | |
TACCAAGTGAGCTAAGCTCA+CGG | - | chr4_3:49158502-49158521 | None:intergenic | 45.0% | |
TGAGCTTAGCTCACTTGGTA+AGG | + | chr4_3:49158502-49158521 | Msa0644800:intron | 45.0% | |
TGCATATATATGCAGGGGTC+GGG | + | chr4_3:49158530-49158549 | Msa0644800:intron | 45.0% | |
! | AGTGAATAAGTGGAGTGTCC+GGG | - | chr4_3:49158564-49158583 | None:intergenic | 45.0% |
GGTGAATTTCTCTAGCCGAT+AGG | + | chr4_3:49158589-49158608 | Msa0644800:intron | 45.0% | |
AGCCACACTTCCTTGAATTG+TGG | + | chr4_3:49158733-49158752 | Msa0644800:intron | 45.0% | |
TGCCACAATTCAAGGAAGTG+TGG | - | chr4_3:49158738-49158757 | None:intergenic | 45.0% | |
GAAAAAGTGACTCTAGTGCC+TGG | + | chr4_3:49159099-49159118 | Msa0644800:CDS | 45.0% | |
AAAAGTGACTCTAGTGCCTG+GGG | + | chr4_3:49159101-49159120 | Msa0644800:CDS | 45.0% | |
! | TTTTCTTGGGAAATGTCCCC+AGG | - | chr4_3:49159120-49159139 | None:intergenic | 45.0% |
GTAGAGGATCCATACCAACT+TGG | + | chr4_3:49160262-49160281 | Msa0644800:CDS | 45.0% | |
GCAAGGACTAGACATTGATG+AGG | + | chr4_3:49160303-49160322 | Msa0644800:CDS | 45.0% | |
ACAAGAGGGAGCTACTGAAA+AGG | + | chr4_3:49160363-49160382 | Msa0644800:CDS | 45.0% | |
TGCCATGAAGGATTTGGGAA+TGG | + | chr4_3:49160396-49160415 | Msa0644800:CDS | 45.0% | |
GCAATGGGAGAAATGCTAGT+GGG | + | chr4_3:49160616-49160635 | Msa0644800:CDS | 45.0% | |
ACAAAGAACCTTTCCCTGGT+TGG | + | chr4_3:49160698-49160717 | Msa0644800:CDS | 45.0% | |
CAAAGAACCTTTCCCTGGTT+GGG | + | chr4_3:49160699-49160718 | Msa0644800:CDS | 45.0% | |
ATGCTTCCTTGCAGACTTAG+AGG | + | chr4_3:49160902-49160921 | Msa0644800:CDS | 45.0% | |
AAACTGCCTCTAAGTCTGCA+AGG | - | chr4_3:49160911-49160930 | None:intergenic | 45.0% | |
CATTCACCACCATATCAGCA+GGG | - | chr4_3:49161479-49161498 | None:intergenic | 45.0% | |
TATCACGTGGGTTCATCTGT+TGG | + | chr4_3:49161552-49161571 | Msa0644800:CDS | 45.0% | |
ATCACGTGGGTTCATCTGTT+GGG | + | chr4_3:49161553-49161572 | Msa0644800:CDS | 45.0% | |
GAAGGAAGAGCCATCAAAGT+TGG | + | chr4_3:49161648-49161667 | Msa0644800:CDS | 45.0% | |
! | TACGTTGCAAGTCCGTTTTG+CGG | - | chr4_3:49161982-49162001 | None:intergenic | 45.0% |
! | TGCGGTTGGTTGAACTTTAC+AGG | + | chr4_3:49162327-49162346 | Msa0644800:CDS | 45.0% |
AGGCCCTATGTGTTCTTCAA+TGG | + | chr4_3:49162347-49162366 | Msa0644800:CDS | 45.0% | |
CACGCCATTGAAGAACACAT+AGG | - | chr4_3:49162354-49162373 | None:intergenic | 45.0% | |
!! | TAATAATTAAAGAAAATTAA+AGG | - | chr4_3:49160800-49160819 | None:intergenic | 5.0% |
!!! | AAATCATATTAATATTTTTT+AGG | - | chr4_3:49161207-49161226 | None:intergenic | 5.0% |
!!! | AAAAATATTAATATGATTTT+TGG | + | chr4_3:49161208-49161227 | Msa0644800:intron | 5.0% |
!!! | GTTTTGGTACTTGGTGCTGC+TGG | + | chr4_3:49156339-49156358 | Msa0644800:CDS | 50.0% |
AAGATGGTGTCCACCCTTGT+CGG | + | chr4_3:49156879-49156898 | Msa0644800:intron | 50.0% | |
TACCGAGAGTAACCCGACAA+GGG | - | chr4_3:49156895-49156914 | None:intergenic | 50.0% | |
ATACCGAGAGTAACCCGACA+AGG | - | chr4_3:49156896-49156915 | None:intergenic | 50.0% | |
GTCATCTATTGCGGAACGGA+TGG | - | chr4_3:49157608-49157627 | None:intergenic | 50.0% | |
ACCAAGTGAGCTAAGCTCAC+GGG | - | chr4_3:49158501-49158520 | None:intergenic | 50.0% | |
GCATATATATGCAGGGGTCG+GGG | + | chr4_3:49158531-49158550 | Msa0644800:intron | 50.0% | |
! | GTGAATAAGTGGAGTGTCCG+GGG | - | chr4_3:49158563-49158582 | None:intergenic | 50.0% |
! | ATTTTCACACCCACCTCACG+TGG | + | chr4_3:49158918-49158937 | Msa0644800:intron | 50.0% |
! | TTTTCACACCCACCTCACGT+GGG | + | chr4_3:49158919-49158938 | Msa0644800:intron | 50.0% |
GTGCTTGTCCACGTATCAAC+AGG | + | chr4_3:49159439-49159458 | Msa0644800:CDS | 50.0% | |
GCATACGTATGTGGAGAGAG+AGG | + | chr4_3:49160229-49160248 | Msa0644800:intron | 50.0% | |
TACGTATGTGGAGAGAGAGG+AGG | + | chr4_3:49160232-49160251 | Msa0644800:CDS | 50.0% | |
GAGAGGAGGACTGATAGTAG+AGG | + | chr4_3:49160246-49160265 | Msa0644800:CDS | 50.0% | |
GGCAATGGGAGAAATGCTAG+TGG | + | chr4_3:49160615-49160634 | Msa0644800:CDS | 50.0% | |
TTACTCCTTCGACCCAACCA+GGG | - | chr4_3:49160714-49160733 | None:intergenic | 50.0% | |
GAAGCAGATCCCTGCTGATA+TGG | + | chr4_3:49161467-49161486 | Msa0644800:intron | 50.0% | |
GCATTCACCACCATATCAGC+AGG | - | chr4_3:49161480-49161499 | None:intergenic | 50.0% | |
GGTGGTGAATGCAATGCTAG+TGG | + | chr4_3:49161488-49161507 | Msa0644800:CDS | 50.0% | |
GAATGCAATGCTAGTGGCCA+TGG | + | chr4_3:49161494-49161513 | Msa0644800:CDS | 50.0% | |
! | ACGTTGCAAGTCCGTTTTGC+GGG | - | chr4_3:49161981-49162000 | None:intergenic | 50.0% |
GGAAGGTCCATACTGTGATG+CGG | + | chr4_3:49162309-49162328 | Msa0644800:CDS | 50.0% | |
CAACCAACCGCATCACAGTA+TGG | - | chr4_3:49162319-49162338 | None:intergenic | 50.0% | |
AGATGGTGTCCACCCTTGTC+GGG | + | chr4_3:49156880-49156899 | Msa0644800:intron | 55.0% | |
CACCCTTGTCGGGTTACTCT+CGG | + | chr4_3:49156890-49156909 | Msa0644800:intron | 55.0% | |
CCAAGTGAGCTAAGCTCACG+GGG | - | chr4_3:49158500-49158519 | None:intergenic | 55.0% | |
TTTCACACCCACCTCACGTG+GGG | + | chr4_3:49158920-49158939 | Msa0644800:intron | 55.0% | |
ATACGTGGACAAGCACCCTG+AGG | - | chr4_3:49159435-49159454 | None:intergenic | 55.0% | |
CTTACTCCTTCGACCCAACC+AGG | - | chr4_3:49160715-49160734 | None:intergenic | 55.0% | |
CTGGTTGGGTCGAAGGAGTA+AGG | + | chr4_3:49160713-49160732 | Msa0644800:CDS | 55.0% | |
GCAGATCCCTGCTGATATGG+TGG | + | chr4_3:49161470-49161489 | Msa0644800:intron | 55.0% | |
GGTCCATACTGTGATGCGGT+TGG | + | chr4_3:49162313-49162332 | Msa0644800:CDS | 55.0% | |
CGAGAGTAACCCGACAAGGG+TGG | - | chr4_3:49156892-49156911 | None:intergenic | 60.0% | |
CCCCGTGAGCTTAGCTCACT+TGG | + | chr4_3:49158497-49158516 | Msa0644800:intron | 60.0% | |
CCTTCGACCCAACCAGGGAA+AGG | - | chr4_3:49160709-49160728 | None:intergenic | 60.0% | |
CCTTTCCCTGGTTGGGTCGA+AGG | + | chr4_3:49160706-49160725 | Msa0644800:CDS | 60.0% | |
CAAGCCTCCCCACGTGAGGT+GGG | - | chr4_3:49158930-49158949 | None:intergenic | 65.0% | |
TAGCCAAGCCTCCCCACGTG+AGG | - | chr4_3:49158934-49158953 | None:intergenic | 65.0% | |
AGGGGTCGGGGTTCGAACCC+CGG | + | chr4_3:49158543-49158562 | Msa0644800:intron | 70.0% | |
CACACCCACCTCACGTGGGG+AGG | + | chr4_3:49158923-49158942 | Msa0644800:intron | 70.0% | |
CCAAGCCTCCCCACGTGAGG+TGG | - | chr4_3:49158931-49158950 | None:intergenic | 70.0% | |
CCACCTCACGTGGGGAGGCT+TGG | + | chr4_3:49158928-49158947 | Msa0644800:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 49156178 | 49162835 | 49156178 | ID=Msa0644800;Name=Msa0644800 |
chr4_3 | mRNA | 49156178 | 49162835 | 49156178 | ID=Msa0644800-mRNA-1;Parent=Msa0644800;Name=Msa0644800-mRNA-1;_AED=0.09;_eAED=0.09;_QI=116|1|1|1|1|1|10|142|492 |
chr4_3 | exon | 49156178 | 49156375 | 49156178 | ID=Msa0644800-mRNA-1:exon:11685;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49156493 | 49156596 | 49156493 | ID=Msa0644800-mRNA-1:exon:11686;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49159030 | 49159232 | 49159030 | ID=Msa0644800-mRNA-1:exon:11687;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49159360 | 49159460 | 49159360 | ID=Msa0644800-mRNA-1:exon:11688;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49160230 | 49160422 | 49160230 | ID=Msa0644800-mRNA-1:exon:11689;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49160573 | 49160734 | 49160573 | ID=Msa0644800-mRNA-1:exon:11690;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49160857 | 49160938 | 49160857 | ID=Msa0644800-mRNA-1:exon:11691;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49161474 | 49161743 | 49161474 | ID=Msa0644800-mRNA-1:exon:11692;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49162245 | 49162372 | 49162245 | ID=Msa0644800-mRNA-1:exon:11693;Parent=Msa0644800-mRNA-1 |
chr4_3 | exon | 49162540 | 49162835 | 49162540 | ID=Msa0644800-mRNA-1:exon:11694;Parent=Msa0644800-mRNA-1 |
chr4_3 | five_prime_UTR | 49156178 | 49156293 | 49156178 | ID=Msa0644800-mRNA-1:five_prime_utr;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49156294 | 49156375 | 49156294 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49156493 | 49156596 | 49156493 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49159030 | 49159232 | 49159030 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49159360 | 49159460 | 49159360 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49160230 | 49160422 | 49160230 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49160573 | 49160734 | 49160573 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49160857 | 49160938 | 49160857 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49161474 | 49161743 | 49161474 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49162245 | 49162372 | 49162245 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | CDS | 49162540 | 49162693 | 49162540 | ID=Msa0644800-mRNA-1:cds;Parent=Msa0644800-mRNA-1 |
chr4_3 | three_prime_UTR | 49162694 | 49162835 | 49162694 | ID=Msa0644800-mRNA-1:three_prime_utr;Parent=Msa0644800-mRNA-1 |
Gene Sequence |
Protein sequence |