AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0295080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295080 MtrunA17_Chr2g0317131 94.824 483 25 0 1 483 1 483 0.0 906
Msa0295080 MtrunA17_Chr2g0317151 88.199 483 47 2 1 483 1 473 0.0 820
Msa0295080 MtrunA17_Chr2g0317171 82.025 484 79 2 1 483 1 477 0.0 778
Msa0295080 MtrunA17_Chr2g0317161 80.745 483 81 1 1 483 1 471 0.0 771
Msa0295080 MtrunA17_Chr2g0317221 88.052 385 46 0 99 483 7 391 0.0 662
Msa0295080 MtrunA17_Chr6g0483361 41.775 462 252 5 21 476 10 460 1.09e-122 367
Msa0295080 MtrunA17_Chr6g0483381 40.512 469 266 3 11 476 4 462 7.04e-122 365
Msa0295080 MtrunA17_Chr8g0392601 40.089 449 263 1 28 476 3 445 2.89e-120 360
Msa0295080 MtrunA17_Chr1g0208791 41.149 435 256 0 42 476 42 476 1.08e-119 360
Msa0295080 MtrunA17_Chr1g0208821 39.957 463 273 3 16 477 17 475 1.39e-114 346
Msa0295080 MtrunA17_Chr6g0483341 39.310 435 263 1 43 476 41 475 1.33e-112 341
Msa0295080 MtrunA17_Chr6g0477961 40.920 435 251 2 46 476 30 462 9.18e-111 336
Msa0295080 MtrunA17_Chr7g0251331 37.924 472 285 3 14 483 1 466 1.68e-106 325
Msa0295080 MtrunA17_Chr6g0483331 38.497 439 261 3 43 476 12 446 4.85e-106 323
Msa0295080 MtrunA17_Chr4g0024501 36.853 483 294 3 12 483 22 504 4.87e-103 317
Msa0295080 MtrunA17_Chr2g0322671 36.157 484 299 3 3 476 2 485 1.93e-102 315
Msa0295080 MtrunA17_Chr6g0449061 37.288 472 280 3 6 476 8 464 3.44e-102 314
Msa0295080 MtrunA17_Chr6g0483351 41.470 381 213 3 102 476 1 377 4.83e-100 307
Msa0295080 MtrunA17_Chr1g0208881 37.188 441 277 0 43 483 25 465 1.82e-96 299
Msa0295080 MtrunA17_Chr6g0483161 40.263 380 202 3 100 476 1 358 3.50e-92 285
Msa0295080 MtrunA17_Chr1g0208891 35.874 446 276 2 43 483 24 464 1.19e-90 284
Msa0295080 MtrunA17_Chr5g0442331 36.878 442 276 3 34 474 38 477 2.36e-87 276
Msa0295080 MtrunA17_Chr2g0288281 36.554 383 242 1 102 483 1 383 7.86e-86 269
Msa0295080 MtrunA17_Chr7g0254511 36.105 457 290 1 20 476 7 461 7.59e-82 261
Msa0295080 MtrunA17_Chr8g0368001 33.563 435 288 1 42 476 49 482 1.76e-81 261
Msa0295080 MtrunA17_Chr5g0412771 34.180 433 284 1 44 476 57 488 2.40e-81 261
Msa0295080 MtrunA17_Chr1g0202761 33.682 478 300 6 10 476 3 474 1.73e-79 256
Msa0295080 MtrunA17_Chr1g0203791 33.803 426 276 2 52 474 73 495 3.32e-78 254
Msa0295080 MtrunA17_Chr5g0397991 33.045 463 291 4 24 470 34 493 5.33e-78 253
Msa0295080 MtrunA17_Chr5g0412541 34.562 434 282 2 44 476 37 469 9.04e-78 251
Msa0295080 MtrunA17_Chr6g0468531 34.681 470 294 5 11 476 2 462 2.75e-76 247
Msa0295080 MtrunA17_Chr7g0254521 35.484 434 279 1 43 476 31 463 2.76e-75 244
Msa0295080 MtrunA17_Chr7g0251321 35.467 375 223 1 102 476 1 356 7.69e-75 240
Msa0295080 MtrunA17_Chr6g0468521 32.558 473 299 6 11 476 2 461 9.38e-75 243
Msa0295080 MtrunA17_Chr8g0389801 34.562 434 280 3 42 474 22 452 2.63e-73 239
Msa0295080 MtrunA17_Chr6g0473701 31.365 491 306 8 11 474 73 559 1.09e-72 241
Msa0295080 MtrunA17_Chr5g0428251 30.625 480 323 4 10 483 17 492 4.55e-71 235
Msa0295080 MtrunA17_Chr3g0132531 32.809 445 289 3 41 476 36 479 4.01e-70 231
Msa0295080 MtrunA17_Chr7g0254531 37.500 376 232 2 102 476 1 374 7.09e-70 228
Msa0295080 MtrunA17_Chr7g0248051 35.102 490 293 6 6 476 18 501 4.41e-69 229
Msa0295080 MtrunA17_Chr6g0468511 33.191 467 304 4 11 476 2 461 5.79e-69 228
Msa0295080 MtrunA17_Chr1g0154441 34.400 375 245 1 102 476 1 374 4.46e-67 220
Msa0295080 MtrunA17_Chr6g0460541 35.584 385 245 2 100 483 3 385 1.36e-66 219
Msa0295080 MtrunA17_Chr6g0467321 30.444 450 304 3 43 483 42 491 7.19e-65 218
Msa0295080 MtrunA17_Chr3g0140931 29.778 450 307 4 10 455 19 463 4.14e-63 214
Msa0295080 MtrunA17_Chr5g0412571 36.649 382 232 7 100 476 38 414 6.46e-61 205
Msa0295080 MtrunA17_Chr4g0013031 30.569 422 285 4 43 459 66 484 1.05e-59 204
Msa0295080 MtrunA17_Chr4g0025551 62.570 179 44 4 121 299 1 156 2.40e-56 184
Msa0295080 MtrunA17_Chr7g0254501 37.586 290 179 1 187 476 2 289 5.44e-53 181
Msa0295080 MtrunA17_Chr2g0317211 82.000 100 12 1 1 100 1 94 9.63e-51 168
Msa0295080 MtrunA17_Chr3g0132541 27.542 472 277 5 7 476 10 418 1.78e-49 175
Msa0295080 MtrunA17_Chr5g0440661 29.443 377 202 6 102 477 1 314 1.06e-44 159
Msa0295080 MtrunA17_Chr2g0295631 25.109 458 325 3 42 482 19 475 3.15e-44 162
Msa0295080 MtrunA17_Chr6g0483264 40.513 195 116 0 282 476 1 195 1.30e-39 142
Msa0295080 MtrunA17_Chr8g0364761 31.641 256 174 1 56 310 66 321 4.12e-39 144
Msa0295080 MtrunA17_Chr6g0483241 38.122 181 112 0 100 280 1 181 2.35e-38 138
Msa0295080 MtrunA17_Chr8g0364751 44.156 154 86 0 323 476 13 166 2.31e-33 124
Msa0295080 MtrunA17_Chr6g0487091 27.635 351 222 7 145 476 46 383 5.48e-32 127
Msa0295080 MtrunA17_Chr6g0460521 39.394 198 120 0 279 476 1 198 1.01e-30 119
Msa0295080 MtrunA17_Chr6g0483221 43.709 151 79 2 329 476 6 153 1.66e-29 114
Msa0295080 MtrunA17_Chr5g0398571 32.178 202 137 0 281 482 85 286 6.91e-28 113
Msa0295080 MtrunA17_Chr6g0483261 40.541 148 88 0 329 476 6 153 3.78e-25 102
Msa0295080 MtrunA17_Chr6g0460531 30.126 239 164 2 43 280 24 260 3.72e-23 98.6
Msa0295080 MtrunA17_Chr5g0442311 27.374 179 130 0 102 280 1 179 3.43e-19 85.1
Msa0295080 MtrunA17_Chr5g0398551 41.176 85 50 0 38 122 38 122 1.92e-14 70.5
Msa0295080 MtrunA17_Chr7g0254491 35.238 105 66 1 25 129 14 116 2.80e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295080 AT3G23560.1 59.831 473 187 2 9 480 5 475 0.0 583
Msa0295080 AT3G23550.1 60.390 462 183 0 17 478 4 465 0.0 580
Msa0295080 AT3G23560.2 59.204 402 161 2 9 409 5 404 3.75e-170 486
Msa0295080 AT2G34360.1 43.207 449 247 3 29 476 12 453 2.92e-117 353
Msa0295080 AT5G52450.1 44.700 434 240 0 43 476 25 458 1.60e-116 351
Msa0295080 AT1G73700.1 42.887 471 254 2 6 476 1 456 1.55e-115 348
Msa0295080 AT1G15150.1 39.348 460 274 2 20 474 2 461 6.82e-108 329
Msa0295080 AT1G66760.2 37.632 473 284 2 11 483 6 467 3.40e-104 320
Msa0295080 AT1G66760.1 37.983 466 278 2 11 476 6 460 6.06e-104 318
Msa0295080 AT1G15170.1 39.490 471 272 2 7 474 4 464 1.37e-103 318
Msa0295080 AT1G15160.1 38.126 459 281 1 21 476 5 463 8.95e-103 316
Msa0295080 AT2G04040.1 39.171 434 262 2 44 476 27 459 4.21e-101 311
Msa0295080 AT2G34360.2 38.616 448 227 1 29 476 12 411 2.99e-98 303
Msa0295080 AT3G21690.1 35.073 479 302 3 7 476 6 484 2.31e-96 300
Msa0295080 AT2G04080.1 37.097 434 271 2 44 476 27 459 3.44e-96 299
Msa0295080 AT2G04080.2 37.097 434 271 2 44 476 27 459 5.47e-96 298
Msa0295080 AT2G04070.1 37.415 441 260 3 44 476 27 459 7.79e-96 298
Msa0295080 AT1G11670.1 36.952 433 273 0 44 476 50 482 8.38e-96 298
Msa0295080 AT1G71140.1 37.045 440 267 3 42 476 24 458 9.77e-96 298
Msa0295080 AT1G15180.1 38.581 451 264 2 10 457 8 448 1.92e-95 297
Msa0295080 AT2G04100.1 37.259 467 286 4 11 476 2 462 2.73e-95 296
Msa0295080 AT2G04100.2 37.288 472 288 5 11 480 2 467 3.23e-95 296
Msa0295080 AT2G04050.1 36.287 474 278 3 11 476 2 459 1.15e-94 295
Msa0295080 AT2G04090.1 36.403 467 290 4 11 476 2 462 1.29e-91 287
Msa0295080 AT1G61890.1 35.632 435 280 0 42 476 45 479 1.90e-91 287
Msa0295080 AT1G61890.2 34.279 458 299 1 21 476 22 479 3.44e-91 286
Msa0295080 AT4G21903.1 37.685 406 252 1 71 476 80 484 2.52e-90 285
Msa0295080 AT1G66780.1 35.990 414 265 0 63 476 54 467 4.17e-90 283
Msa0295080 AT4G21903.2 37.685 406 252 1 71 476 80 484 4.80e-90 284
Msa0295080 AT1G47530.1 36.207 464 291 3 13 476 8 466 7.45e-89 280
Msa0295080 AT3G59030.1 34.623 491 305 6 7 483 3 491 2.47e-88 280
Msa0295080 AT1G23300.1 36.259 433 275 1 44 476 44 475 1.97e-86 275
Msa0295080 AT4G21910.2 35.104 433 280 1 44 476 57 488 2.57e-86 274
Msa0295080 AT4G21910.4 35.104 433 280 1 44 476 57 488 2.57e-86 274
Msa0295080 AT1G64820.1 34.240 441 282 2 40 476 25 461 1.00e-85 273
Msa0295080 AT4G21910.3 34.642 433 282 1 44 476 55 486 2.99e-85 271
Msa0295080 AT4G21910.1 34.642 433 282 1 44 476 55 486 2.99e-85 271
Msa0295080 AT1G33090.1 36.501 463 287 2 14 476 12 467 5.69e-85 270
Msa0295080 AT1G33110.1 34.968 469 297 3 9 476 6 467 4.28e-84 268
Msa0295080 AT1G15150.2 41.159 345 202 1 140 483 11 355 7.93e-84 263
Msa0295080 AT1G15170.2 41.543 337 197 0 140 476 11 347 1.08e-83 263
Msa0295080 AT1G61890.3 35.627 407 262 0 42 448 45 451 1.79e-83 266
Msa0295080 AT3G26590.1 33.787 441 290 2 44 483 45 484 5.89e-83 265
Msa0295080 AT1G66760.4 37.343 399 239 2 11 409 6 393 1.17e-82 261
Msa0295080 AT5G38030.1 33.643 431 285 1 44 474 45 474 1.59e-82 264
Msa0295080 AT4G21903.3 36.800 375 237 0 102 476 1 375 3.33e-82 260
Msa0295080 AT1G12950.1 34.475 438 276 3 44 476 67 498 8.70e-82 263
Msa0295080 AT1G33100.1 35.398 452 291 1 25 476 14 464 4.58e-81 260
Msa0295080 AT5G44050.1 33.895 475 303 4 3 476 8 472 4.87e-78 252
Msa0295080 AT1G33080.2 34.047 467 300 3 10 476 9 467 5.87e-78 252
Msa0295080 AT1G33080.1 34.047 467 300 3 10 476 9 467 8.49e-78 251
Msa0295080 AT4G00350.1 34.318 440 285 2 38 476 82 518 2.88e-77 251
Msa0295080 AT1G47530.2 37.067 375 235 1 102 476 1 374 6.46e-77 246
Msa0295080 AT3G26590.2 34.987 383 247 2 102 483 1 382 8.13e-75 241
Msa0295080 AT5G10420.1 35.096 416 265 2 44 457 38 450 2.39e-71 234
Msa0295080 AT5G65380.1 31.423 471 314 4 7 476 7 469 1.71e-70 232
Msa0295080 AT2G38510.1 32.176 432 287 4 43 470 5 434 4.71e-69 228
Msa0295080 AT5G19700.1 29.854 479 325 3 11 483 2 475 1.04e-67 226
Msa0295080 AT1G66760.3 35.347 331 214 0 146 476 2 332 2.07e-66 217
Msa0295080 AT4G29140.1 30.734 436 296 2 42 474 54 486 3.33e-66 222
Msa0295080 AT4G23030.1 34.101 434 278 4 42 470 30 460 1.68e-65 219
Msa0295080 AT4G25640.1 32.727 440 293 2 37 476 28 464 2.87e-65 219
Msa0295080 AT4G25640.2 32.727 440 293 2 37 476 28 464 7.30e-65 218
Msa0295080 AT5G17700.2 31.838 468 308 6 9 474 5 463 1.16e-64 217
Msa0295080 AT5G17700.1 31.838 468 308 6 9 474 5 463 1.16e-64 217
Msa0295080 AT5G52050.1 29.474 475 312 5 6 470 7 468 3.97e-64 216
Msa0295080 AT1G58340.1 30.913 427 294 1 30 455 43 469 3.76e-63 214
Msa0295080 AT3G03620.2 31.373 459 304 5 19 474 16 466 6.46e-62 210
Msa0295080 AT3G03620.1 31.373 459 304 5 19 474 16 466 6.46e-62 210
Msa0295080 AT1G33110.2 33.499 403 260 3 9 410 6 401 9.54e-62 207
Msa0295080 AT3G59030.2 31.731 416 269 5 7 409 3 416 8.43e-61 205
Msa0295080 AT4G25640.3 32.598 408 272 2 37 444 28 432 1.70e-60 205
Msa0295080 AT1G71870.1 28.696 460 310 3 42 483 22 481 1.90e-60 206
Msa0295080 AT5G49130.1 30.197 457 301 5 42 482 24 478 2.93e-59 203
Msa0295080 AT4G22790.1 29.211 469 315 5 19 476 2 464 2.52e-56 195
Msa0295080 AT1G15180.2 38.889 270 165 0 140 409 11 280 4.79e-56 192
Msa0295080 AT5G17700.3 30.769 403 268 6 9 409 5 398 1.76e-49 174
Msa0295080 AT2G04066.1 35.556 135 79 1 342 476 28 154 3.93e-20 88.2

Find 114 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCATTTGTCCTCCATTTC+TGG 0.007321 2_3:-47384715 None:intergenic
GCAATTCAAAATAAATTATT+TGG 0.148973 2_3:-47384176 None:intergenic
CTATGATGATGTAGGGTTTA+TGG 0.149157 2_3:+47389409 Msa0295080:intron
GTGCTACTCTTGCTAATTCT+TGG 0.196457 2_3:+47384878 Msa0295080:CDS
GTATTGGGCTTTCGAAATTT+TGG 0.223515 2_3:+47388258 Msa0295080:CDS
TAAGACCAATTTGCATTATA+AGG 0.233144 2_3:+47389050 Msa0295080:CDS
ATTGCATGTTTAGCTCTTTC+AGG 0.235007 2_3:-47388651 None:intergenic
GCAAACTTATGTTTGATAAT+AGG 0.247196 2_3:-47388771 None:intergenic
CACAAGGATTTCCAATGAAT+TGG 0.272145 2_3:+47388617 Msa0295080:CDS
ATTGCTTACATGATCACTTA+TGG 0.287008 2_3:+47388437 Msa0295080:CDS
CAATTTCATTGATTGCAATA+TGG 0.290681 2_3:+47388317 Msa0295080:CDS
TTATGCAAGTTTGGAGTATT+GGG 0.298247 2_3:+47388243 Msa0295080:intron
TGTGGCCTAGTGTGTCAAAT+TGG 0.300864 2_3:+47389444 Msa0295080:CDS
TAGGGCAGATGAAAATTTAT+TGG 0.302483 2_3:+47384097 Msa0295080:five_prime_UTR
ACTATGGATATCTATGATAT+TGG 0.310139 2_3:+47387544 Msa0295080:CDS
GATATTCAGTTTAGTCCATT+TGG 0.317780 2_3:-47389493 None:intergenic
TCTGTCCAAGGTGTCTTATC+AGG 0.328815 2_3:+47388834 Msa0295080:CDS
TTGGTTTCTGTCATGCTTGT+TGG 0.351093 2_3:+47384829 Msa0295080:CDS
TTGCAACTTCTATTTCACTA+TGG 0.356695 2_3:+47387528 Msa0295080:CDS
CTGTACCCTATCATTCTTGT+TGG 0.356729 2_3:-47384147 None:intergenic
CAATCATTATATCAATTGTT+TGG 0.358665 2_3:+47387255 Msa0295080:CDS
TGGACAGGTTTGAGTTTCAT+AGG 0.359141 2_3:+47387497 Msa0295080:CDS
ACAAAACACAAGACCAGAAA+TGG 0.359995 2_3:+47384702 Msa0295080:CDS
CTGCCAACAACTCATGATAA+TGG 0.361188 2_3:+47384676 Msa0295080:CDS
ACAAGGATTTCCAATGAATT+GGG 0.362220 2_3:+47388618 Msa0295080:CDS
TTGCATATGGATTTGTTCAA+TGG 0.367870 2_3:+47387477 Msa0295080:CDS
TGATACCTTATAATGCAAAT+TGG 0.372077 2_3:-47389055 None:intergenic
TTATGGATTGGTCTAATTTG+TGG 0.372381 2_3:+47389426 Msa0295080:CDS
GAAATTGTTATTTGTGAGTC+AGG 0.374296 2_3:-47388301 None:intergenic
TTGGACAGAATCTAGTAGTA+TGG 0.375092 2_3:-47388820 None:intergenic
CTTGGTGAGCTTCAGTTAGC+TGG 0.379613 2_3:+47384856 Msa0295080:CDS
ATTCATGTTGGAATTGCATA+TGG 0.380327 2_3:+47387464 Msa0295080:CDS
ATTATGCAAGTTTGGAGTAT+TGG 0.381254 2_3:+47388242 Msa0295080:intron
ACACTCTGTGGACAAGGATT+TGG 0.381964 2_3:+47387167 Msa0295080:CDS
CATAATGCAGGGGTGGTTAG+AGG 0.384287 2_3:+47388943 Msa0295080:intron
TTGTCTTAGGTTGGTTTAAG+TGG 0.395039 2_3:+47387134 Msa0295080:intron
AAATCCAAGGAGACATGAAA+TGG 0.395733 2_3:-47389028 None:intergenic
TTACCCATTTCATGTCTCCT+TGG 0.412363 2_3:+47389024 Msa0295080:CDS
CTAAAGCTGTCTGTCCTCCT+TGG 0.415938 2_3:+47388684 Msa0295080:CDS
AATTCTTGGTTTAGTGTCAC+TGG 0.416494 2_3:+47384892 Msa0295080:CDS
TGAAAACATGAGTTGTTGTT+TGG 0.419197 2_3:-47384764 None:intergenic
TGGGACCCAACAAGAATGAT+AGG 0.419606 2_3:+47384141 Msa0295080:five_prime_UTR
GCAGGGGTGGTTAGAGGATG+TGG 0.439484 2_3:+47388949 Msa0295080:intron
TATGGATTTGTTCAATGGAC+AGG 0.441588 2_3:+47387482 Msa0295080:CDS
GTCATGCTTGTTGGTCACCT+TGG 0.441677 2_3:+47384838 Msa0295080:CDS
TGTACCCTATCATTCTTGTT+GGG 0.441968 2_3:-47384146 None:intergenic
TGTCACTGGTGTAGCAGTTA+TGG 0.450952 2_3:+47384906 Msa0295080:CDS
CAAATGGTGGAACAAAATCT+TGG 0.453309 2_3:+47384729 Msa0295080:CDS
TTTCCATTATCATGAGTTGT+TGG 0.465756 2_3:-47384679 None:intergenic
GACCAGAAATGGAGGACAAA+TGG 0.466040 2_3:+47384713 Msa0295080:CDS
GTTGTTATACAGCAATAAGT+TGG 0.467334 2_3:-47389534 None:intergenic
CAAAGAAGTTTGAGAATACA+TGG 0.472713 2_3:+47387588 Msa0295080:CDS
TTCCAACATGAATCAATGTT+GGG 0.472995 2_3:-47387454 None:intergenic
TTCTAGCAATGTCTGGTGAT+TGG 0.478680 2_3:-47387310 None:intergenic
ATTCCAACATGAATCAATGT+TGG 0.483393 2_3:-47387455 None:intergenic
GCAGCTGTTCTAGCAATGTC+TGG 0.494495 2_3:-47387317 None:intergenic
AAACTAGCTCTTCCTTCTGC+AGG 0.494520 2_3:+47387656 Msa0295080:CDS
TTCCTTCTGCAGGAATGGTA+TGG 0.496185 2_3:+47387666 Msa0295080:CDS
ATGGACTAAACTGAATATCT+CGG 0.497360 2_3:+47389497 Msa0295080:CDS
TGGATATCTATGATATTGGT+AGG 0.501013 2_3:+47387548 Msa0295080:CDS
TGAGTTGTTGGCAGTAATAG+AGG 0.501704 2_3:-47384667 None:intergenic
TGCAAAGGAATATCACATGC+TGG 0.508646 2_3:+47387190 Msa0295080:CDS
AGCTCTTCCTTCTGCAGGAA+TGG 0.510077 2_3:+47387661 Msa0295080:CDS
GTGGCCTAGTGTGTCAAATT+GGG 0.511399 2_3:+47389445 Msa0295080:CDS
AGTGAAATAGAAGTTGCAAC+TGG 0.517295 2_3:-47387524 None:intergenic
ATCCCAACATTGATTCATGT+TGG 0.524947 2_3:+47387452 Msa0295080:CDS
AGGATGTGGTTGGCAGCACT+TGG 0.524967 2_3:+47388963 Msa0295080:CDS
CATGTTTAGCTCTTTCAGGA+TGG 0.526642 2_3:-47388647 None:intergenic
CTAGAAACACTCTGTGGACA+AGG 0.528099 2_3:+47387161 Msa0295080:CDS
TGGACTAAACTGAATATCTC+GGG 0.533874 2_3:+47389498 Msa0295080:CDS
ACGCTATATGCAAATAATCC+TGG 0.537941 2_3:-47387362 None:intergenic
GCGTCTTGCAAAACTTGTTG+AGG 0.540279 2_3:+47387381 Msa0295080:CDS
TCAAAACAAAACAGAATCCA+AGG 0.547423 2_3:-47388701 None:intergenic
GCAAATTGGTCTTAAATCCA+AGG 0.548068 2_3:-47389041 None:intergenic
TATATGAAGTTTCTTATACC+AGG 0.554707 2_3:+47387344 Msa0295080:CDS
AATCCAAGGAGACATGAAAT+GGG 0.556157 2_3:-47389027 None:intergenic
ATGATGTAGGGTTTATGGAT+TGG 0.565269 2_3:+47389414 Msa0295080:intron
AATCATAACAGAACACATGA+AGG 0.569553 2_3:+47384573 Msa0295080:five_prime_UTR
GGGTGGTTAGAGGATGTGGT+TGG 0.574146 2_3:+47388953 Msa0295080:CDS
GCAAAGGAATATCACATGCT+GGG 0.577298 2_3:+47387191 Msa0295080:CDS
GGACTGAATATGTATGTGTT+GGG 0.579811 2_3:+47389570 Msa0295080:three_prime_UTR
TACCATACCATTCCTGCAGA+AGG 0.580379 2_3:-47387668 None:intergenic
CAAGGATTTCCAATGAATTG+GGG 0.583001 2_3:+47388619 Msa0295080:CDS
AAGTTTGAGAATACATGGAG+AGG 0.586144 2_3:+47387593 Msa0295080:CDS
ATATACTAATAGCTGCCACT+TGG 0.586541 2_3:-47389595 None:intergenic
GAGAACGCATATTGTTGCAA+AGG 0.590258 2_3:+47392493 Msa0295080:three_prime_UTR
ACAATCTGTAGTAATGCCAC+TGG 0.591821 2_3:+47387415 Msa0295080:CDS
AGGACTGAATATGTATGTGT+TGG 0.596168 2_3:+47389569 Msa0295080:three_prime_UTR
ATACTACTAGATTCTGTCCA+AGG 0.600992 2_3:+47388822 Msa0295080:CDS
GGGACCCAACAAGAATGATA+GGG 0.602375 2_3:+47384142 Msa0295080:five_prime_UTR
TCAAACCTGATAAGACACCT+TGG 0.605007 2_3:-47388839 None:intergenic
TTTGTCAATAAAGTTGCGTG+AGG 0.605601 2_3:+47384054 Msa0295080:five_prime_UTR
ATGCTGGGAATTTATCTACA+AGG 0.607996 2_3:+47387206 Msa0295080:CDS
CAGAAATGGAGGACAAATGG+TGG 0.611520 2_3:+47384716 Msa0295080:CDS
TCAATGTTGGGATAGCTGAA+AGG 0.615047 2_3:-47387442 None:intergenic
TGGACAAGGATTTGGTGCAA+AGG 0.616863 2_3:+47387175 Msa0295080:CDS
GTGGAACAAAATCTTGGACA+TGG 0.619014 2_3:+47384735 Msa0295080:CDS
AAACACAAGACCAGAAATGG+AGG 0.620372 2_3:+47384705 Msa0295080:CDS
ATGGTCTTAGTGCAGCTGCA+AGG 0.630564 2_3:+47388456 Msa0295080:CDS
CAATGTCTGGTGATTGGTGA+AGG 0.631557 2_3:-47387304 None:intergenic
CAGCAGCTCATATAAATGCG+TGG 0.641111 2_3:+47392365 Msa0295080:intron
AGTATGGAAATAGCAAGCAA+AGG 0.641984 2_3:-47388804 None:intergenic
GCAGCAAGTATCATTTCAGA+CGG 0.643990 2_3:+47384634 Msa0295080:CDS
GTGTCCCAATTTGACACACT+AGG 0.649634 2_3:-47389449 None:intergenic
AAGGATTTCCAATGAATTGG+GGG 0.656984 2_3:+47388620 Msa0295080:CDS
ACAGGTTTGAGTTTCATAGG+TGG 0.681266 2_3:+47387500 Msa0295080:CDS
AAGATAGTTCAAAATTCACA+TGG 0.684402 2_3:+47384612 Msa0295080:exon
ATAACAACTGAACTATACGT+AGG 0.698814 2_3:+47389549 Msa0295080:three_prime_UTR
CAGCTAACTGAAGCTCACCA+AGG 0.723214 2_3:-47384855 None:intergenic
ATAGCTGAAAGGATAACCAG+TGG 0.728809 2_3:-47387431 None:intergenic
GAACAAAATCTTGGACATGG+AGG 0.742594 2_3:+47384738 Msa0295080:CDS
GGTGCACTAGAAACACTCTG+TGG 0.762528 2_3:+47387155 Msa0295080:CDS
AAACAAAACAGAATCCAAGG+AGG 0.770094 2_3:-47388698 None:intergenic
TGTATGTGTTGGGAACCAAG+TGG 0.851953 2_3:+47389580 Msa0295080:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAATAAAGAATTG+AGG - chr2_3:47385256-47385275 None:intergenic 10.0%
!!! ATAAACTTTTTCTTATAATA+AGG - chr2_3:47385479-47385498 None:intergenic 10.0%
!! AAAATATTATACTCTATAAT+GGG - chr2_3:47385792-47385811 None:intergenic 10.0%
!! ATTTATTTCATTATAAAAAG+TGG - chr2_3:47385896-47385915 None:intergenic 10.0%
!!! AATAATTTTTAAAAATGAGA+TGG + chr2_3:47390784-47390803 Msa0295080:intron 10.0%
!! GCAATTCAAAATAAATTATT+TGG - chr2_3:47384179-47384198 None:intergenic 15.0%
!! AATAAAAAATGAGAAAAACA+AGG - chr2_3:47384278-47384297 None:intergenic 15.0%
!!! TTGTTTTTCTCATTTTTTAT+TGG + chr2_3:47384277-47384296 Msa0295080:intron 15.0%
!! AATAAGTTTGTAAAAATCAT+TGG - chr2_3:47384793-47384812 None:intergenic 15.0%
!!! ATTTTATTACTTGATTACTT+TGG + chr2_3:47384810-47384829 Msa0295080:CDS 15.0%
!! GCATAAACATTTATATTTAT+TGG - chr2_3:47385155-47385174 None:intergenic 15.0%
!!! TTGATTCTTATTTTTTTGTA+GGG + chr2_3:47385660-47385679 Msa0295080:intron 15.0%
!!! TATTTAATATGGTGTTAAAT+AGG - chr2_3:47385764-47385783 None:intergenic 15.0%
!! TATTTAACACCATATTAAAT+AGG + chr2_3:47385763-47385782 Msa0295080:intron 15.0%
!! AAATATTATACTCTATAATG+GGG - chr2_3:47385791-47385810 None:intergenic 15.0%
!! CAAAATATTATACTCTATAA+TGG - chr2_3:47385793-47385812 None:intergenic 15.0%
!!! CATTATAGAGTATAATATTT+TGG + chr2_3:47385791-47385810 Msa0295080:intron 15.0%
!!! AGTAATTTCATTTGAATTTT+TGG + chr2_3:47385964-47385983 Msa0295080:intron 15.0%
!! TCTTATATTTGATTCTTAAA+TGG - chr2_3:47386050-47386069 None:intergenic 15.0%
!! ATAATCAATTGAAGTAAATT+TGG + chr2_3:47386184-47386203 Msa0295080:intron 15.0%
!! TAATCAATTGAAGTAAATTT+GGG + chr2_3:47386185-47386204 Msa0295080:intron 15.0%
!! TAATAAAACAAAAATTAGTG+AGG - chr2_3:47386492-47386511 None:intergenic 15.0%
!!! AAATTTGTTTATATGAGAAT+TGG + chr2_3:47386794-47386813 Msa0295080:intron 15.0%
!!! ATTGATCATTTAAGTTATTT+TGG + chr2_3:47387910-47387929 Msa0295080:intron 15.0%
!! ATAGTAAGATTCATAATATA+AGG - chr2_3:47388211-47388230 None:intergenic 15.0%
!! TTTATTGACAAAAAAATCTT+AGG + chr2_3:47388905-47388924 Msa0295080:intron 15.0%
!! TTATTGACAAAAAAATCTTA+GGG + chr2_3:47388906-47388925 Msa0295080:intron 15.0%
!!! TTTAGTAAAAATTCTCTTTT+CGG - chr2_3:47389159-47389178 None:intergenic 15.0%
!! CATAAAAATTAGTTCAATTA+AGG + chr2_3:47389307-47389326 Msa0295080:intron 15.0%
!!! TTTTTATTGGTCAAAAACAA+TGG + chr2_3:47384290-47384309 Msa0295080:intron 20.0%
!!! TCTTTTCTTATATTTAAGAC+CGG + chr2_3:47384531-47384550 Msa0295080:intron 20.0%
!! CATTGAATAACTAATGTATT+TGG - chr2_3:47385548-47385567 None:intergenic 20.0%
!!! CTTGATTCTTATTTTTTTGT+AGG + chr2_3:47385659-47385678 Msa0295080:intron 20.0%
!!! ATTTCATTTGAATTTTTGGT+TGG + chr2_3:47385968-47385987 Msa0295080:intron 20.0%
!!! ATGTTCACATACTTATTTTA+CGG - chr2_3:47386020-47386039 None:intergenic 20.0%
!! ATTTCAAAGGAGATTATTTA+TGG - chr2_3:47386101-47386120 None:intergenic 20.0%
!! TTTCGTGCATAATTTAATAA+AGG + chr2_3:47386263-47386282 Msa0295080:intron 20.0%
!! TTATATTAAAGAATGCTCTA+AGG + chr2_3:47386287-47386306 Msa0295080:intron 20.0%
!! TACTAGGAAAAGAAAAATTA+GGG + chr2_3:47386362-47386381 Msa0295080:intron 20.0%
!! ATGATCAACATATGTAAAAA+TGG - chr2_3:47386571-47386590 None:intergenic 20.0%
!! AAAACAACAAAAACAAAATG+GGG - chr2_3:47386760-47386779 None:intergenic 20.0%
!! CAAAACAACAAAAACAAAAT+GGG - chr2_3:47386761-47386780 None:intergenic 20.0%
!! ACAAAACAACAAAAACAAAA+TGG - chr2_3:47386762-47386781 None:intergenic 20.0%
!! AAAGAACATAGTTTAATCTT+GGG - chr2_3:47387101-47387120 None:intergenic 20.0%
!! CAATCATTATATCAATTGTT+TGG + chr2_3:47387255-47387274 Msa0295080:CDS 20.0%
!! AAATGAACAAATAAAGTGAA+AGG - chr2_3:47387708-47387727 None:intergenic 20.0%
!!! ACAAAGTTTGCTAAATTATT+AGG + chr2_3:47387747-47387766 Msa0295080:intron 20.0%
!!! TATATTAGACTTTTGATTGT+TGG + chr2_3:47387844-47387863 Msa0295080:intron 20.0%
!!! ATTGATCCTTTAAGTTATTT+TGG - chr2_3:47388127-47388146 None:intergenic 20.0%
!!! TATTTTGTATTATGCAAGTT+TGG + chr2_3:47388234-47388253 Msa0295080:intron 20.0%
!! TATTGACAAAAAAATCTTAG+GGG + chr2_3:47388907-47388926 Msa0295080:intron 20.0%
!!! TAAACAAAAATTCTCTTTTC+AGG - chr2_3:47389253-47389272 None:intergenic 20.0%
!!! AGAGAAAATTTAATTTTCTC+AGG - chr2_3:47389794-47389813 None:intergenic 20.0%
!! AGAAAAAAAATAGAAGGAAA+AGG - chr2_3:47389832-47389851 None:intergenic 20.0%
!! TGAAAGAGAAAAAAAATAGA+AGG - chr2_3:47389838-47389857 None:intergenic 20.0%
!! ATCAATGAAATTTGATGAAA+TGG - chr2_3:47389939-47389958 None:intergenic 20.0%
!!! TTCATCAAATTTCATTGATT+TGG + chr2_3:47389940-47389959 Msa0295080:intron 20.0%
!!! TTAGATATGGTCATTTTTTT+TGG + chr2_3:47390996-47391015 Msa0295080:intron 20.0%
!!! CAAGTGAATTTTTTGGTATT+GGG + chr2_3:47384122-47384141 Msa0295080:five_prime_UTR 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG - chr2_3:47384422-47384441 None:intergenic 25.0%
! CATTGAATAGTTAATGTATC+TGG + chr2_3:47384457-47384476 Msa0295080:intron 25.0%
! AAGATAGTTCAAAATTCACA+TGG + chr2_3:47384612-47384631 Msa0295080:exon 25.0%
!!! TTGCTTTAAAAAGACTTAAG+AGG + chr2_3:47385401-47385420 Msa0295080:intron 25.0%
! TCATAACGCTATACTTTATT+TGG - chr2_3:47385605-47385624 None:intergenic 25.0%
!!! AATTTTTGGTTGGAGAAAAT+TGG + chr2_3:47385978-47385997 Msa0295080:intron 25.0%
! AAATATAAGATGCTATGTTG+TGG + chr2_3:47386060-47386079 Msa0295080:intron 25.0%
! AAGTTGTTGCAAACATTAAT+GGG - chr2_3:47386135-47386154 None:intergenic 25.0%
! TACTTTCTTAAATCACTACT+AGG + chr2_3:47386346-47386365 Msa0295080:intron 25.0%
! CTACTAGGAAAAGAAAAATT+AGG + chr2_3:47386361-47386380 Msa0295080:intron 25.0%
! GTATGTTCATCATAAACTTT+AGG + chr2_3:47386544-47386563 Msa0295080:intron 25.0%
!! CATATAAACAAATTTTGCAG+AGG - chr2_3:47386789-47386808 None:intergenic 25.0%
!!! GTAGTTGCAGTTTATTTTAT+GGG - chr2_3:47386885-47386904 None:intergenic 25.0%
!!! TGTAGTTGCAGTTTATTTTA+TGG - chr2_3:47386886-47386905 None:intergenic 25.0%
! AGTTTAACCTTGTAAATTCA+AGG + chr2_3:47386931-47386950 Msa0295080:intron 25.0%
! GTCTGAATATGTAAAATTAG+AGG + chr2_3:47387032-47387051 Msa0295080:intron 25.0%
! CAAAGAACATAGTTTAATCT+TGG - chr2_3:47387102-47387121 None:intergenic 25.0%
! TATATGAAGTTTCTTATACC+AGG + chr2_3:47387344-47387363 Msa0295080:CDS 25.0%
! ACTATGGATATCTATGATAT+TGG + chr2_3:47387544-47387563 Msa0295080:CDS 25.0%
!! ATTGTTGGCTAAATTACATA+TGG + chr2_3:47387859-47387878 Msa0295080:intron 25.0%
!! TTGTTGGCTAAATTACATAT+GGG + chr2_3:47387860-47387879 Msa0295080:intron 25.0%
! GAAAACGTTTACAAACTTAA+AGG - chr2_3:47388029-47388048 None:intergenic 25.0%
!! ACATAAGTCATTTAAGTTTG+AGG - chr2_3:47388040-47388059 None:intergenic 25.0%
!! CAATTTCATTGATTGCAATA+TGG + chr2_3:47388317-47388336 Msa0295080:CDS 25.0%
!!! TTGAACTTTTTTATAGCACA+AGG + chr2_3:47388601-47388620 Msa0295080:intron 25.0%
!!! TTTGTTTTGATGCTTTTGTT+TGG + chr2_3:47388714-47388733 Msa0295080:CDS 25.0%
!!! TTTTGTTTGGTCATGATATA+TGG + chr2_3:47388727-47388746 Msa0295080:CDS 25.0%
!! GCAAACTTATGTTTGATAAT+AGG - chr2_3:47388774-47388793 None:intergenic 25.0%
! TAAGACCAATTTGCATTATA+AGG + chr2_3:47389050-47389069 Msa0295080:CDS 25.0%
! TGATACCTTATAATGCAAAT+TGG - chr2_3:47389058-47389077 None:intergenic 25.0%
!! TAATAGTGATAAGAGTATGT+AGG + chr2_3:47389273-47389292 Msa0295080:intron 25.0%
!!! AATTTTGTCTATGATGATGT+AGG + chr2_3:47389401-47389420 Msa0295080:intron 25.0%
!!! ATTTTGTCTATGATGATGTA+GGG + chr2_3:47389402-47389421 Msa0295080:intron 25.0%
! ATAGAATCAAGAAGATGAAT+CGG - chr2_3:47390070-47390089 None:intergenic 25.0%
!!! AGTTTATCAGCTTTATTTGA+AGG + chr2_3:47390566-47390585 Msa0295080:intron 25.0%
!!! ATGTGTTCTGTTTAGTTTTT+TGG + chr2_3:47390705-47390724 Msa0295080:intron 25.0%
! ATTCAGAATTGGATTACTTA+TGG + chr2_3:47390969-47390988 Msa0295080:intron 25.0%
!!! ATTATTGGTTAACATGGTTT+TGG + chr2_3:47391056-47391075 Msa0295080:intron 25.0%
!!! TTATTGGTTAACATGGTTTT+GGG + chr2_3:47391057-47391076 Msa0295080:intron 25.0%
!!! TGTTTTTCGTTTTGAAGAAT+TGG + chr2_3:47391139-47391158 Msa0295080:intron 25.0%
! TCTTGCAAGAAAATATGATA+TGG - chr2_3:47391269-47391288 None:intergenic 25.0%
!!! TTTTTGCTTGTTTTTCTGTT+TGG + chr2_3:47391599-47391618 Msa0295080:intron 25.0%
!!! TTTTGGTTTAGCTTCATTAT+TGG + chr2_3:47391640-47391659 Msa0295080:intron 25.0%
!!! TGGATATCATCATTGATTTT+TGG + chr2_3:47391921-47391940 Msa0295080:intron 25.0%
! AATATCAACAAAGCCTTAAA+AGG - chr2_3:47392017-47392036 None:intergenic 25.0%
! ACTTGAAATGAGAAAATACA+AGG - chr2_3:47392179-47392198 None:intergenic 25.0%
!!! TGTATTTTCTCATTTCAAGT+TGG + chr2_3:47392179-47392198 Msa0295080:intron 25.0%
!!! TATCCAACTACTTTTTCAGT+AGG + chr2_3:47384078-47384097 Msa0295080:five_prime_UTR 30.0%
!!! ATCCAACTACTTTTTCAGTA+GGG + chr2_3:47384079-47384098 Msa0295080:five_prime_UTR 30.0%
TAGGGCAGATGAAAATTTAT+TGG + chr2_3:47384097-47384116 Msa0295080:five_prime_UTR 30.0%
!!! ATTGGTGCAAGTGAATTTTT+TGG + chr2_3:47384115-47384134 Msa0295080:five_prime_UTR 30.0%
!!! GCAAGTGAATTTTTTGGTAT+TGG + chr2_3:47384121-47384140 Msa0295080:five_prime_UTR 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr2_3:47384252-47384271 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr2_3:47384303-47384322 Msa0295080:intron 30.0%
GAGAGAAAGTTGTCAAAAAA+TGG + chr2_3:47384359-47384378 Msa0295080:intron 30.0%
! TTTCTTATATTTAAGACCGG+AGG + chr2_3:47384534-47384553 Msa0295080:intron 30.0%
! TTCTTATATTTAAGACCGGA+GGG + chr2_3:47384535-47384554 Msa0295080:intron 30.0%
AATCATAACAGAACACATGA+AGG + chr2_3:47384573-47384592 Msa0295080:five_prime_UTR 30.0%
TTTCCATTATCATGAGTTGT+TGG - chr2_3:47384682-47384701 None:intergenic 30.0%
! TGAAAACATGAGTTGTTGTT+TGG - chr2_3:47384767-47384786 None:intergenic 30.0%
TCATTTCCATAGATGTTGAT+AGG + chr2_3:47384965-47384984 Msa0295080:intron 30.0%
ATTGTTCCTATCAACATCTA+TGG - chr2_3:47384974-47384993 None:intergenic 30.0%
CAAGTTGTTGCAAACATTAA+TGG - chr2_3:47386136-47386155 None:intergenic 30.0%
! TTTGTTACCATTGATGCTTT+TGG - chr2_3:47386163-47386182 None:intergenic 30.0%
!! TTGGGAAAGTACTAGTAAAT+TGG + chr2_3:47386203-47386222 Msa0295080:intron 30.0%
!! TGGGAAAGTACTAGTAAATT+GGG + chr2_3:47386204-47386223 Msa0295080:intron 30.0%
TAGGAAAAGAAAAATTAGGG+AGG + chr2_3:47386365-47386384 Msa0295080:intron 30.0%
AGGAAAAGAAAAATTAGGGA+GGG + chr2_3:47386366-47386385 Msa0295080:intron 30.0%
AAAATCCCTCACAAATTCTT+TGG + chr2_3:47386408-47386427 Msa0295080:intron 30.0%
! TTGGTGGCAAAATTTAGTTA+CGG + chr2_3:47386427-47386446 Msa0295080:intron 30.0%
TAGTGAGGAAAATTTAGAGA+GGG - chr2_3:47386477-47386496 None:intergenic 30.0%
TTAGTGAGGAAAATTTAGAG+AGG - chr2_3:47386478-47386497 None:intergenic 30.0%
AAGTTTATGATGAACATACG+TGG - chr2_3:47386543-47386562 None:intergenic 30.0%
GTCATTTATTTCACGCAAAT+TGG + chr2_3:47386846-47386865 Msa0295080:intron 30.0%
ATTTATTTCACGCAAATTGG+AGG + chr2_3:47386849-47386868 Msa0295080:intron 30.0%
GTTCATACCTTGAATTTACA+AGG - chr2_3:47386941-47386960 None:intergenic 30.0%
ACTTTAAATTTCCTCGAACA+TGG + chr2_3:47386959-47386978 Msa0295080:intron 30.0%
!! TAATTTTTCAACCATGTTCG+AGG - chr2_3:47386973-47386992 None:intergenic 30.0%
TTCCAACATGAATCAATGTT+GGG - chr2_3:47387457-47387476 None:intergenic 30.0%
ATTCCAACATGAATCAATGT+TGG - chr2_3:47387458-47387477 None:intergenic 30.0%
ATTCATGTTGGAATTGCATA+TGG + chr2_3:47387464-47387483 Msa0295080:CDS 30.0%
! TTGCATATGGATTTGTTCAA+TGG + chr2_3:47387477-47387496 Msa0295080:CDS 30.0%
TTGCAACTTCTATTTCACTA+TGG + chr2_3:47387528-47387547 Msa0295080:CDS 30.0%
TGGATATCTATGATATTGGT+AGG + chr2_3:47387548-47387567 Msa0295080:CDS 30.0%
CAAAGAAGTTTGAGAATACA+TGG + chr2_3:47387588-47387607 Msa0295080:CDS 30.0%
!! AGTTTGCTAAATTATTAGGC+CGG + chr2_3:47387751-47387770 Msa0295080:intron 30.0%
AAATGTTGCTCAAAGTAAAC+CGG - chr2_3:47387773-47387792 None:intergenic 30.0%
! TGTTGGCTAAATTACATATG+GGG + chr2_3:47387861-47387880 Msa0295080:intron 30.0%
! TATGGGGTCATTTAAGTTTA+AGG + chr2_3:47387877-47387896 Msa0295080:intron 30.0%
!! ATCATCGTTTTTGTAACGTT+TGG - chr2_3:47387990-47388009 None:intergenic 30.0%
! GTTTGAGGTTTGTAACAAAT+TGG - chr2_3:47388085-47388104 None:intergenic 30.0%
GTGTGACCAAAATAACTTAA+AGG + chr2_3:47388118-47388137 Msa0295080:intron 30.0%
ACAAAGTCTAAATTACACCA+GGG - chr2_3:47388173-47388192 None:intergenic 30.0%
AACAAAGTCTAAATTACACC+AGG - chr2_3:47388174-47388193 None:intergenic 30.0%
! ATTATGCAAGTTTGGAGTAT+TGG + chr2_3:47388242-47388261 Msa0295080:intron 30.0%
! TTATGCAAGTTTGGAGTATT+GGG + chr2_3:47388243-47388262 Msa0295080:intron 30.0%
!!! GAAATTTTGGTTTTCTTAGC+TGG + chr2_3:47388271-47388290 Msa0295080:CDS 30.0%
!! GAAATTGTTATTTGTGAGTC+AGG - chr2_3:47388304-47388323 None:intergenic 30.0%
! TCATTGATTGCAATATGGTA+TGG + chr2_3:47388322-47388341 Msa0295080:intron 30.0%
ATTGCTTACATGATCACTTA+TGG + chr2_3:47388437-47388456 Msa0295080:CDS 30.0%
ACAAGGATTTCCAATGAATT+GGG + chr2_3:47388618-47388637 Msa0295080:CDS 30.0%
TCAAAACAAAACAGAATCCA+AGG - chr2_3:47388704-47388723 None:intergenic 30.0%
AAAAATGTCTTGCATAATGC+AGG + chr2_3:47388931-47388950 Msa0295080:intron 30.0%
AAAATGTCTTGCATAATGCA+GGG + chr2_3:47388932-47388951 Msa0295080:intron 30.0%
!! TTATGGATTGGTCTAATTTG+TGG + chr2_3:47389426-47389445 Msa0295080:CDS 30.0%
GATATTCAGTTTAGTCCATT+TGG - chr2_3:47389496-47389515 None:intergenic 30.0%
! ATGGACTAAACTGAATATCT+CGG + chr2_3:47389497-47389516 Msa0295080:CDS 30.0%
GTTGTTATACAGCAATAAGT+TGG - chr2_3:47389537-47389556 None:intergenic 30.0%
ATAACAACTGAACTATACGT+AGG + chr2_3:47389549-47389568 Msa0295080:three_prime_UTR 30.0%
GATGAAGTTATCCACTAATA+GGG - chr2_3:47389634-47389653 None:intergenic 30.0%
TGATGAAGTTATCCACTAAT+AGG - chr2_3:47389635-47389654 None:intergenic 30.0%
AAATGGTGATCAAGAAGAAA+AGG - chr2_3:47389922-47389941 None:intergenic 30.0%
CAGAAAGCAAGAAAACAAAT+CGG - chr2_3:47390252-47390271 None:intergenic 30.0%
AATTTGATCCATACGAATCA+AGG - chr2_3:47390276-47390295 None:intergenic 30.0%
TCATATTGCAAGAACAATGA+AGG - chr2_3:47390833-47390852 None:intergenic 30.0%
AAGCAAGATAACAAGCAATT+AGG - chr2_3:47390929-47390948 None:intergenic 30.0%
! CTTTTATGTTAGTTCAAGCA+TGG + chr2_3:47390946-47390965 Msa0295080:intron 30.0%
TACTTATGGTGTCTTAGATA+TGG + chr2_3:47390983-47391002 Msa0295080:intron 30.0%
!!! GGTCATTTTTTTTGGTATGT+TGG + chr2_3:47391004-47391023 Msa0295080:intron 30.0%
!! TTTTTGGTATGTTGGTATAC+TGG + chr2_3:47391012-47391031 Msa0295080:intron 30.0%
! GCAGAAATTATTGGTTAACA+TGG + chr2_3:47391050-47391069 Msa0295080:intron 30.0%
CAAAACGAAAAACAATGTAG+TGG - chr2_3:47391133-47391152 None:intergenic 30.0%
CAAGAAAATATGATATGGCA+AGG - chr2_3:47391264-47391283 None:intergenic 30.0%
AACTTCTATTCTCTCGTTAT+TGG + chr2_3:47391326-47391345 Msa0295080:intron 30.0%
ATGTGAATTAGTTGTGCATT+TGG + chr2_3:47391368-47391387 Msa0295080:intron 30.0%
!! TGCATATTGACTTATGTCAA+TGG + chr2_3:47391535-47391554 Msa0295080:intron 30.0%
! TGTTTGGAGACTATTTTCTT+TGG + chr2_3:47391615-47391634 Msa0295080:intron 30.0%
!!! GACTATTTTCTTTGGAGTTT+TGG + chr2_3:47391623-47391642 Msa0295080:intron 30.0%
!!! ATTATTGGAAGCATTGGTTT+TGG + chr2_3:47391655-47391674 Msa0295080:intron 30.0%
!! CAACATGGATTTGTTTTCTA+TGG + chr2_3:47391696-47391715 Msa0295080:intron 30.0%
!!! GAGCATCTCTTTTTTATCTT+TGG + chr2_3:47391794-47391813 Msa0295080:intron 30.0%
!!! CTTTTTTATCTTTGGAACCT+TGG + chr2_3:47391802-47391821 Msa0295080:intron 30.0%
TTGTTGATATTTGCTTCTAC+CGG + chr2_3:47392026-47392045 Msa0295080:intron 30.0%
TTTGTCAATAAAGTTGCGTG+AGG + chr2_3:47384054-47384073 Msa0295080:five_prime_UTR 35.0%
TGTACCCTATCATTCTTGTT+GGG - chr2_3:47384149-47384168 None:intergenic 35.0%
TCATATACATATACTCCCTC+CGG + chr2_3:47384400-47384419 Msa0295080:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr2_3:47384418-47384437 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr2_3:47384419-47384438 None:intergenic 35.0%
ACAAAACACAAGACCAGAAA+TGG + chr2_3:47384702-47384721 Msa0295080:CDS 35.0%
! CAAATGGTGGAACAAAATCT+TGG + chr2_3:47384729-47384748 Msa0295080:CDS 35.0%
AATTCTTGGTTTAGTGTCAC+TGG + chr2_3:47384892-47384911 Msa0295080:CDS 35.0%
! GTGTGTTCATTGATTAGACA+CGG + chr2_3:47384998-47385017 Msa0295080:intron 35.0%
CACGGACAATCAAAAACATA+TGG + chr2_3:47385016-47385035 Msa0295080:intron 35.0%
AAGTATAGCGTTATGATGTC+CGG + chr2_3:47385609-47385628 Msa0295080:intron 35.0%
! AAGCCTTTTATTCTACCAAG+TGG - chr2_3:47385637-47385656 None:intergenic 35.0%
AAAACACTCGTCATTGTAGA+TGG - chr2_3:47385740-47385759 None:intergenic 35.0%
AATGGGGAGCCTATTTAATA+TGG - chr2_3:47385775-47385794 None:intergenic 35.0%
ATGATGAACATACGTGGAAA+TGG - chr2_3:47386537-47386556 None:intergenic 35.0%
ATAAACTGCAACTACACAAG+AGG + chr2_3:47386890-47386909 Msa0295080:intron 35.0%
!! TTGTCTTAGGTTGGTTTAAG+TGG + chr2_3:47387134-47387153 Msa0295080:intron 35.0%
ATGCTGGGAATTTATCTACA+AGG + chr2_3:47387206-47387225 Msa0295080:CDS 35.0%
ACGCTATATGCAAATAATCC+TGG - chr2_3:47387365-47387384 None:intergenic 35.0%
!! ATCCCAACATTGATTCATGT+TGG + chr2_3:47387452-47387471 Msa0295080:CDS 35.0%
! TATGGATTTGTTCAATGGAC+AGG + chr2_3:47387482-47387501 Msa0295080:CDS 35.0%
AGTGAAATAGAAGTTGCAAC+TGG - chr2_3:47387527-47387546 None:intergenic 35.0%
AAGTTTGAGAATACATGGAG+AGG + chr2_3:47387593-47387612 Msa0295080:CDS 35.0%
! TACATGGAGAGGATTTTCAA+TGG + chr2_3:47387604-47387623 Msa0295080:CDS 35.0%
! TGTAACGTTTGGTTCACATA+GGG - chr2_3:47387979-47387998 None:intergenic 35.0%
! TTGTAACGTTTGGTTCACAT+AGG - chr2_3:47387980-47387999 None:intergenic 35.0%
ACGTTACAAAAACGATGATG+TGG + chr2_3:47387991-47388010 Msa0295080:intron 35.0%
CAAAGTCTAAATTACACCAG+GGG - chr2_3:47388172-47388191 None:intergenic 35.0%
! GTATTGGGCTTTCGAAATTT+TGG + chr2_3:47388258-47388277 Msa0295080:CDS 35.0%
AACAGAATCCATTCCTTCAT+AGG + chr2_3:47388495-47388514 Msa0295080:intron 35.0%
ACAGAATCCATTCCTTCATA+GGG + chr2_3:47388496-47388515 Msa0295080:intron 35.0%
CAATAAAATGACCCCTATGA+AGG - chr2_3:47388511-47388530 None:intergenic 35.0%
!! CTTCATAGGGGTCATTTTAT+TGG + chr2_3:47388509-47388528 Msa0295080:intron 35.0%
CACAAGGATTTCCAATGAAT+TGG + chr2_3:47388617-47388636 Msa0295080:CDS 35.0%
CAAGGATTTCCAATGAATTG+GGG + chr2_3:47388619-47388638 Msa0295080:CDS 35.0%
AAGGATTTCCAATGAATTGG+GGG + chr2_3:47388620-47388639 Msa0295080:CDS 35.0%
!! ATTGCATGTTTAGCTCTTTC+AGG - chr2_3:47388654-47388673 None:intergenic 35.0%
AAACAAAACAGAATCCAAGG+AGG - chr2_3:47388701-47388720 None:intergenic 35.0%
AGTATGGAAATAGCAAGCAA+AGG - chr2_3:47388807-47388826 None:intergenic 35.0%
TTGGACAGAATCTAGTAGTA+TGG - chr2_3:47388823-47388842 None:intergenic 35.0%
ATACTACTAGATTCTGTCCA+AGG + chr2_3:47388822-47388841 Msa0295080:CDS 35.0%
GCTGAAGTTAAAAAGAGATG+AGG - chr2_3:47388868-47388887 None:intergenic 35.0%
AAATGTCTTGCATAATGCAG+GGG + chr2_3:47388933-47388952 Msa0295080:intron 35.0%
AATCCAAGGAGACATGAAAT+GGG - chr2_3:47389030-47389049 None:intergenic 35.0%
AAATCCAAGGAGACATGAAA+TGG - chr2_3:47389031-47389050 None:intergenic 35.0%
!! GCAAATTGGTCTTAAATCCA+AGG - chr2_3:47389044-47389063 None:intergenic 35.0%
! CTATGATGATGTAGGGTTTA+TGG + chr2_3:47389409-47389428 Msa0295080:intron 35.0%
ATGATGTAGGGTTTATGGAT+TGG + chr2_3:47389414-47389433 Msa0295080:intron 35.0%
TGGACTAAACTGAATATCTC+GGG + chr2_3:47389498-47389517 Msa0295080:CDS 35.0%
AGGACTGAATATGTATGTGT+TGG + chr2_3:47389569-47389588 Msa0295080:three_prime_UTR 35.0%
GGACTGAATATGTATGTGTT+GGG + chr2_3:47389570-47389589 Msa0295080:three_prime_UTR 35.0%
ATATACTAATAGCTGCCACT+TGG - chr2_3:47389598-47389617 None:intergenic 35.0%
GCTTGTAATAACCCTATTAG+TGG + chr2_3:47389620-47389639 Msa0295080:intron 35.0%
GTTAGGAAACATGATATCCA+AGG - chr2_3:47389716-47389735 None:intergenic 35.0%
GGATATCATGTTTCCTAACA+TGG + chr2_3:47389717-47389736 Msa0295080:intron 35.0%
!! ATTAGCTCTGATACCATGTT+AGG - chr2_3:47389733-47389752 None:intergenic 35.0%
! ATTTTCTCAGGAAAATGCAG+CGG - chr2_3:47389782-47389801 None:intergenic 35.0%
!!! TTTTTTCGTCTTCGTCATTC+TGG + chr2_3:47389889-47389908 Msa0295080:intron 35.0%
AATTGTAATCGTGAAACCCT+AGG - chr2_3:47390042-47390061 None:intergenic 35.0%
ATCAAAAAAGCAATCGCAAC+TGG - chr2_3:47390169-47390188 None:intergenic 35.0%
!! CTGAATTTCTACGCTTTTTG+CGG + chr2_3:47390213-47390232 Msa0295080:intron 35.0%
CACGAAACAGGAATAGAATT+TGG - chr2_3:47390347-47390366 None:intergenic 35.0%
AATTAGAATCGCAAACCCTA+AGG - chr2_3:47390396-47390415 None:intergenic 35.0%
TTCATTCATATGCACACACA+AGG + chr2_3:47390739-47390758 Msa0295080:intron 35.0%
! TACCTACTGCTCATCAATTT+TGG + chr2_3:47390853-47390872 Msa0295080:intron 35.0%
GGATTGTCTTTGACATTCAT+TGG + chr2_3:47390877-47390896 Msa0295080:intron 35.0%
!! TGGTTTTCTTTGAAGAAGAG+TGG + chr2_3:47390897-47390916 Msa0295080:intron 35.0%
TTCAAGCATGGATTCAGAAT+TGG + chr2_3:47390958-47390977 Msa0295080:intron 35.0%
!!! GGTATACTGGTTCTATTTTG+AGG + chr2_3:47391025-47391044 Msa0295080:intron 35.0%
!!! ATACTGGTTCTATTTTGAGG+AGG + chr2_3:47391028-47391047 Msa0295080:intron 35.0%
TTTGAGGAGGCAGAAATTAT+TGG + chr2_3:47391041-47391060 Msa0295080:intron 35.0%
GAAACATGTGATTCTGTTTG+TGG + chr2_3:47391209-47391228 Msa0295080:intron 35.0%
AATATGATATGGCAAGGAAC+TGG - chr2_3:47391258-47391277 None:intergenic 35.0%
TTCATGAAACTACCAACAAG+AGG - chr2_3:47391292-47391311 None:intergenic 35.0%
!!! GTTATTGGTGATGTTTTCGT+TGG + chr2_3:47391341-47391360 Msa0295080:intron 35.0%
CAATCTTCAGAAAACACTTC+AGG - chr2_3:47391440-47391459 None:intergenic 35.0%
ACATGAGAAACCAAATACCA+AGG - chr2_3:47391483-47391502 None:intergenic 35.0%
GTTTCTCATGTTGCATTATC+TGG + chr2_3:47391492-47391511 Msa0295080:intron 35.0%
! AGCTTCATTATTGGAAGCAT+TGG + chr2_3:47391649-47391668 Msa0295080:intron 35.0%
TGTTGATGCATTCAAACCAT+AGG - chr2_3:47391681-47391700 None:intergenic 35.0%
ATGGTTTGAATGCATCAACA+TGG + chr2_3:47391681-47391700 Msa0295080:intron 35.0%
TGGTTTGAAGACAAATCACA+TGG + chr2_3:47391716-47391735 Msa0295080:intron 35.0%
!!! GCATTTGGTTTTTCTTGTCT+CGG + chr2_3:47391759-47391778 Msa0295080:intron 35.0%
TTGAACAAACTTCACACCAA+AGG - chr2_3:47391846-47391865 None:intergenic 35.0%
! AGAAAAAGAAGTGCAAGGAA+GGG - chr2_3:47391899-47391918 None:intergenic 35.0%
! AAGAAAAAGAAGTGCAAGGA+AGG - chr2_3:47391900-47391919 None:intergenic 35.0%
! CCAAAAGAAAAAGAAGTGCA+AGG - chr2_3:47391904-47391923 None:intergenic 35.0%
! CCTTGCACTTCTTTTTCTTT+TGG + chr2_3:47391901-47391920 Msa0295080:intron 35.0%
TTGATGCTTCTTCCTTCAAT+TGG + chr2_3:47392068-47392087 Msa0295080:intron 35.0%
AAAATACAAGGAAAGATGCC+GGG - chr2_3:47392167-47392186 None:intergenic 35.0%
GAAAATACAAGGAAAGATGC+CGG - chr2_3:47392168-47392187 None:intergenic 35.0%
ACTTGTAATAACCCCATTAG+TGG + chr2_3:47392249-47392268 Msa0295080:intron 35.0%
CTTGTAATAACCCCATTAGT+GGG + chr2_3:47392250-47392269 Msa0295080:intron 35.0%
ATGAAGTTATCCCACTAATG+GGG - chr2_3:47392263-47392282 None:intergenic 35.0%
GATGAAGTTATCCCACTAAT+GGG - chr2_3:47392264-47392283 None:intergenic 35.0%
TGATGAAGTTATCCCACTAA+TGG - chr2_3:47392265-47392284 None:intergenic 35.0%
GTTAGGAAACATGATATCCA+AGG - chr2_3:47389716-47389735 None:intergenic 35.0%
CATTTATATGAGCTGCTGTT+AGG - chr2_3:47392363-47392382 None:intergenic 35.0%
TGCCCTACTGAAAAAGTAGT+TGG - chr2_3:47384084-47384103 None:intergenic 40.0%
CTGTACCCTATCATTCTTGT+TGG - chr2_3:47384150-47384169 None:intergenic 40.0%
TTGTTATGTACTACTCCCTC+CGG - chr2_3:47384553-47384572 None:intergenic 40.0%
GCAGCAAGTATCATTTCAGA+CGG + chr2_3:47384634-47384653 Msa0295080:CDS 40.0%
TGAGTTGTTGGCAGTAATAG+AGG - chr2_3:47384670-47384689 None:intergenic 40.0%
CTGCCAACAACTCATGATAA+TGG + chr2_3:47384676-47384695 Msa0295080:CDS 40.0%
AAACACAAGACCAGAAATGG+AGG + chr2_3:47384705-47384724 Msa0295080:CDS 40.0%
GTGGAACAAAATCTTGGACA+TGG + chr2_3:47384735-47384754 Msa0295080:CDS 40.0%
GAACAAAATCTTGGACATGG+AGG + chr2_3:47384738-47384757 Msa0295080:CDS 40.0%
TTGGTTTCTGTCATGCTTGT+TGG + chr2_3:47384829-47384848 Msa0295080:CDS 40.0%
! GTGCTACTCTTGCTAATTCT+TGG + chr2_3:47384878-47384897 Msa0295080:CDS 40.0%
TTTATTCTACCAAGTGGAGC+CGG - chr2_3:47385631-47385650 None:intergenic 40.0%
GCTCCACTTGGTAGAATAAA+AGG + chr2_3:47385631-47385650 Msa0295080:intron 40.0%
!! CTCCTTTGAAATGTAGCCAA+TGG + chr2_3:47386109-47386128 Msa0295080:intron 40.0%
! TGCAAACATTAATGGGCCAT+TGG - chr2_3:47386128-47386147 None:intergenic 40.0%
!! TTGTCCTCCAAAAGCATCAA+TGG + chr2_3:47386153-47386172 Msa0295080:intron 40.0%
! GTTACCATTGATGCTTTTGG+AGG - chr2_3:47386160-47386179 None:intergenic 40.0%
ATCCCTCACAAATTCTTTGG+TGG + chr2_3:47386411-47386430 Msa0295080:intron 40.0%
TGCCACCAAAGAATTTGTGA+GGG - chr2_3:47386416-47386435 None:intergenic 40.0%
TTGCCACCAAAGAATTTGTG+AGG - chr2_3:47386417-47386436 None:intergenic 40.0%
ACCTAAGACAAAGAAGAGCA+AGG - chr2_3:47387125-47387144 None:intergenic 40.0%
TGCTCTTCTTTGTCTTAGGT+TGG + chr2_3:47387125-47387144 Msa0295080:intron 40.0%
TGCAAAGGAATATCACATGC+TGG + chr2_3:47387190-47387209 Msa0295080:CDS 40.0%
GCAAAGGAATATCACATGCT+GGG + chr2_3:47387191-47387210 Msa0295080:CDS 40.0%
TTCTAGCAATGTCTGGTGAT+TGG - chr2_3:47387313-47387332 None:intergenic 40.0%
ACAATCTGTAGTAATGCCAC+TGG + chr2_3:47387415-47387434 Msa0295080:CDS 40.0%
ATAGCTGAAAGGATAACCAG+TGG - chr2_3:47387434-47387453 None:intergenic 40.0%
TCAATGTTGGGATAGCTGAA+AGG - chr2_3:47387445-47387464 None:intergenic 40.0%
! TGGACAGGTTTGAGTTTCAT+AGG + chr2_3:47387497-47387516 Msa0295080:CDS 40.0%
! ACAGGTTTGAGTTTCATAGG+TGG + chr2_3:47387500-47387519 Msa0295080:CDS 40.0%
TGTTCAAACTAGAAGCTACC+GGG - chr2_3:47387821-47387840 None:intergenic 40.0%
GTGTTCAAACTAGAAGCTAC+CGG - chr2_3:47387822-47387841 None:intergenic 40.0%
CAGAATCCATTCCTTCATAG+GGG + chr2_3:47388497-47388516 Msa0295080:intron 40.0%
AAATGACCCCTATGAAGGAA+TGG - chr2_3:47388506-47388525 None:intergenic 40.0%
!! CATGTTTAGCTCTTTCAGGA+TGG - chr2_3:47388650-47388669 None:intergenic 40.0%
TCAAACCTGATAAGACACCT+TGG - chr2_3:47388842-47388861 None:intergenic 40.0%
TTACCCATTTCATGTCTCCT+TGG + chr2_3:47389024-47389043 Msa0295080:CDS 40.0%
!! GGACACTCTTACTTTTGACA+AGG + chr2_3:47389466-47389485 Msa0295080:CDS 40.0%
! TTTTGACAAGGCATGCCAAA+TGG + chr2_3:47389478-47389497 Msa0295080:CDS 40.0%
! GTTTTCTCTCATTCCTTCCT+TGG + chr2_3:47389696-47389715 Msa0295080:intron 40.0%
GGAAACATGATATCCAAGGA+AGG - chr2_3:47389712-47389731 None:intergenic 40.0%
ACATGGTATCAGAGCTAATC+TGG + chr2_3:47389734-47389753 Msa0295080:intron 40.0%
TAATCTGGTATCCACCTTGA+AGG + chr2_3:47389749-47389768 Msa0295080:intron 40.0%
ATCGTGAAACCCTAGGATTT+GGG - chr2_3:47390035-47390054 None:intergenic 40.0%
AATCGTGAAACCCTAGGATT+TGG - chr2_3:47390036-47390055 None:intergenic 40.0%
TCACTTTCTTCGTTCTCGAT+CGG + chr2_3:47390104-47390123 Msa0295080:intron 40.0%
! CTTTCTGTCCTTGATTCGTA+TGG + chr2_3:47390265-47390284 Msa0295080:intron 40.0%
CACAAACTGAAACACGAAAC+AGG - chr2_3:47390359-47390378 None:intergenic 40.0%
! TGTGATTTTCCCCAAACCTT+AGG + chr2_3:47390377-47390396 Msa0295080:intron 40.0%
! GTGATTTTCCCCAAACCTTA+GGG + chr2_3:47390378-47390397 Msa0295080:intron 40.0%
AATCGCAAACCCTAAGGTTT+GGG - chr2_3:47390390-47390409 None:intergenic 40.0%
AGATTAGATTGCATCGTCGA+TGG + chr2_3:47390462-47390481 Msa0295080:intron 40.0%
GAAGTTCTTCGCATTTCTTG+AGG + chr2_3:47390505-47390524 Msa0295080:intron 40.0%
GAGAATCATTCTCAGATGTG+TGG + chr2_3:47390588-47390607 Msa0295080:intron 40.0%
AACCTTCAATGATGCAGATG+AGG - chr2_3:47390669-47390688 None:intergenic 40.0%
ATGGATATTAGTAGCACCCA+TGG + chr2_3:47390803-47390822 Msa0295080:intron 40.0%
GAACAATGAAGGAAAGCCAT+GGG - chr2_3:47390822-47390841 None:intergenic 40.0%
AGAACAATGAAGGAAAGCCA+TGG - chr2_3:47390823-47390842 None:intergenic 40.0%
CTCCAAAATTGATGAGCAGT+AGG - chr2_3:47390858-47390877 None:intergenic 40.0%
! CTACTGCTCATCAATTTTGG+AGG + chr2_3:47390856-47390875 Msa0295080:intron 40.0%
TTTCTTGCAAGACCTCTTGT+TGG + chr2_3:47391277-47391296 Msa0295080:intron 40.0%
!! TGTTGGTAGTTTCATGAAGC+TGG + chr2_3:47391294-47391313 Msa0295080:intron 40.0%
!! GTTGGTAGTTTCATGAAGCT+GGG + chr2_3:47391295-47391314 Msa0295080:intron 40.0%
CAAGTTGTGTTTGCACTAAG+TGG + chr2_3:47391563-47391582 Msa0295080:intron 40.0%
! ACATGGCTATGCATCTCTTT+TGG + chr2_3:47391733-47391752 Msa0295080:intron 40.0%
!!! CATCTCTTTTGGCTTGCATT+TGG + chr2_3:47391744-47391763 Msa0295080:intron 40.0%
! TTGTTGCTTCATGGTACCTT+TGG + chr2_3:47391827-47391846 Msa0295080:intron 40.0%
AGCACAAGACAAGAAGAACA+AGG - chr2_3:47391951-47391970 None:intergenic 40.0%
GAGTGATTGAGAACTCTTGA+TGG + chr2_3:47391979-47391998 Msa0295080:intron 40.0%
!! GTTAAGCGTTGTGCCTTTTA+AGG + chr2_3:47392001-47392020 Msa0295080:intron 40.0%
TGATATTTGCTTCTACCGGA+TGG + chr2_3:47392030-47392049 Msa0295080:intron 40.0%
CTCAAGGTTGAACCAATTGA+AGG - chr2_3:47392083-47392102 None:intergenic 40.0%
! ATTGGTTCAACCTTGAGTAG+TGG + chr2_3:47392086-47392105 Msa0295080:intron 40.0%
TTTGAACACCTTCCAACTTG+AGG + chr2_3:47392208-47392227 Msa0295080:intron 40.0%
TTGAACACCTTCCAACTTGA+GGG + chr2_3:47392209-47392228 Msa0295080:intron 40.0%
! GTTTTCTCTCATTCCTTCCT+TGG + chr2_3:47389696-47389715 Msa0295080:intron 40.0%
GGAAACATGATATCCAAGGA+AGG - chr2_3:47389712-47389731 None:intergenic 40.0%
GAGAACGCATATTGTTGCAA+AGG + chr2_3:47392493-47392512 Msa0295080:three_prime_UTR 40.0%
TGGGACCCAACAAGAATGAT+AGG + chr2_3:47384141-47384160 Msa0295080:five_prime_UTR 45.0%
GGGACCCAACAAGAATGATA+GGG + chr2_3:47384142-47384161 Msa0295080:five_prime_UTR 45.0%
GACCAGAAATGGAGGACAAA+TGG + chr2_3:47384713-47384732 Msa0295080:CDS 45.0%
CACCATTTGTCCTCCATTTC+TGG - chr2_3:47384718-47384737 None:intergenic 45.0%
CAGAAATGGAGGACAAATGG+TGG + chr2_3:47384716-47384735 Msa0295080:CDS 45.0%
TGTCACTGGTGTAGCAGTTA+TGG + chr2_3:47384906-47384925 Msa0295080:CDS 45.0%
! GGCCATTGGCTACATTTCAA+AGG - chr2_3:47386114-47386133 None:intergenic 45.0%
CATACGTGGAAATGGTCTTC+AGG - chr2_3:47386529-47386548 None:intergenic 45.0%
GCCTTGCTCTTCTTTGTCTT+AGG + chr2_3:47387121-47387140 Msa0295080:intron 45.0%
CTAGAAACACTCTGTGGACA+AGG + chr2_3:47387161-47387180 Msa0295080:CDS 45.0%
ACACTCTGTGGACAAGGATT+TGG + chr2_3:47387167-47387186 Msa0295080:CDS 45.0%
!! TGGACAAGGATTTGGTGCAA+AGG + chr2_3:47387175-47387194 Msa0295080:CDS 45.0%
CAATGTCTGGTGATTGGTGA+AGG - chr2_3:47387307-47387326 None:intergenic 45.0%
!! GCGTCTTGCAAAACTTGTTG+AGG + chr2_3:47387381-47387400 Msa0295080:CDS 45.0%
! AAACTAGCTCTTCCTTCTGC+AGG + chr2_3:47387656-47387675 Msa0295080:CDS 45.0%
TTCCTTCTGCAGGAATGGTA+TGG + chr2_3:47387666-47387685 Msa0295080:CDS 45.0%
TACCATACCATTCCTGCAGA+AGG - chr2_3:47387671-47387690 None:intergenic 45.0%
TTCAAACTAGAAGCTACCGG+GGG - chr2_3:47387819-47387838 None:intergenic 45.0%
GTTCAAACTAGAAGCTACCG+GGG - chr2_3:47387820-47387839 None:intergenic 45.0%
CATCACACTTAAAAGACCCC+TGG + chr2_3:47388153-47388172 Msa0295080:intron 45.0%
ATTTCCAATGAATTGGGGGC+AGG + chr2_3:47388624-47388643 Msa0295080:CDS 45.0%
! TCTGTCCAAGGTGTCTTATC+AGG + chr2_3:47388834-47388853 Msa0295080:CDS 45.0%
TGTGGCCTAGTGTGTCAAAT+TGG + chr2_3:47389444-47389463 Msa0295080:CDS 45.0%
GTGGCCTAGTGTGTCAAATT+GGG + chr2_3:47389445-47389464 Msa0295080:CDS 45.0%
GTGTCCCAATTTGACACACT+AGG - chr2_3:47389452-47389471 None:intergenic 45.0%
TGTATGTGTTGGGAACCAAG+TGG + chr2_3:47389580-47389599 Msa0295080:three_prime_UTR 45.0%
GCGGAAAATATCCTTCAAGG+TGG - chr2_3:47389763-47389782 None:intergenic 45.0%
GCAGCGGAAAATATCCTTCA+AGG - chr2_3:47389766-47389785 None:intergenic 45.0%
! ACCATTTTCCCCCAAATCCT+AGG + chr2_3:47390022-47390041 Msa0295080:intron 45.0%
! CCATTTTCCCCCAAATCCTA+GGG + chr2_3:47390023-47390042 Msa0295080:intron 45.0%
TCGTGAAACCCTAGGATTTG+GGG - chr2_3:47390034-47390053 None:intergenic 45.0%
ATCGCAAACCCTAAGGTTTG+GGG - chr2_3:47390389-47390408 None:intergenic 45.0%
GAATCGCAAACCCTAAGGTT+TGG - chr2_3:47390391-47390410 None:intergenic 45.0%
GTCTTGATTTCTCGTTGTCG+TGG + chr2_3:47390421-47390440 Msa0295080:intron 45.0%
ATGTGTGGTGCTTCGTGAAT+TGG + chr2_3:47390603-47390622 Msa0295080:intron 45.0%
CTCCTCATCTGCATCATTGA+AGG + chr2_3:47390664-47390683 Msa0295080:intron 45.0%
GATTGAAGTCTTGCAGCTCA+TGG + chr2_3:47391455-47391474 Msa0295080:intron 45.0%
!!! GAAGCATTGGTTTTGGCCTA+TGG + chr2_3:47391662-47391681 Msa0295080:intron 45.0%
! TGGTTTTTCTTGTCTCGGCT+CGG + chr2_3:47391764-47391783 Msa0295080:intron 45.0%
!! ACCTTGGTCTTGTTGCTTCA+TGG + chr2_3:47391818-47391837 Msa0295080:intron 45.0%
ACCATGAAGCAACAAGACCA+AGG - chr2_3:47391822-47391841 None:intergenic 45.0%
CCAAAGTCTACAATGGAAGG+AGG - chr2_3:47391876-47391895 None:intergenic 45.0%
CCTCCTTCCATTGTAGACTT+TGG + chr2_3:47391873-47391892 Msa0295080:intron 45.0%
TATTTGCTTCTACCGGATGG+TGG + chr2_3:47392033-47392052 Msa0295080:intron 45.0%
CAAGAAGCAACCACTACTCA+AGG - chr2_3:47392099-47392118 None:intergenic 45.0%
GAGTAGTGGTTGCTTCTTGT+TGG + chr2_3:47392100-47392119 Msa0295080:intron 45.0%
TGAACACCTTCCAACTTGAG+GGG + chr2_3:47392210-47392229 Msa0295080:intron 45.0%
ACTAATAGTCCCCCTCAAGT+TGG - chr2_3:47392223-47392242 None:intergenic 45.0%
CAGCAGCTCATATAAATGCG+TGG + chr2_3:47392365-47392384 Msa0295080:intron 45.0%
!! AATATTTATTAAAATACTAA+AGG - chr2_3:47385083-47385102 None:intergenic 5.0%
!!! TTATAAAATTTTATCTAAAT+TGG - chr2_3:47386236-47386255 None:intergenic 5.0%
!! AAACAAATAAAAAAATTATA+AGG - chr2_3:47386719-47386738 None:intergenic 5.0%
! GTCATGCTTGTTGGTCACCT+TGG + chr2_3:47384838-47384857 Msa0295080:CDS 50.0%
CAGCTAACTGAAGCTCACCA+AGG - chr2_3:47384858-47384877 None:intergenic 50.0%
CTTGGTGAGCTTCAGTTAGC+TGG + chr2_3:47384856-47384875 Msa0295080:CDS 50.0%
TTATGATGTCCGGCTCCACT+TGG + chr2_3:47385619-47385638 Msa0295080:intron 50.0%
GGTGCACTAGAAACACTCTG+TGG + chr2_3:47387155-47387174 Msa0295080:CDS 50.0%
GCAGCTGTTCTAGCAATGTC+TGG - chr2_3:47387320-47387339 None:intergenic 50.0%
AGCTCTTCCTTCTGCAGGAA+TGG + chr2_3:47387661-47387680 Msa0295080:CDS 50.0%
AGTTGAGTTACCCAATCCCC+CGG + chr2_3:47387800-47387819 Msa0295080:intron 50.0%
! ATGGTCTTAGTGCAGCTGCA+AGG + chr2_3:47388456-47388475 Msa0295080:CDS 50.0%
AGTGCAGCTGCAAGGTTAGT+TGG + chr2_3:47388464-47388483 Msa0295080:intron 50.0%
CTAAAGCTGTCTGTCCTCCT+TGG + chr2_3:47388684-47388703 Msa0295080:CDS 50.0%
TGTCTTGCATAATGCAGGGG+TGG + chr2_3:47388936-47388955 Msa0295080:intron 50.0%
CATAATGCAGGGGTGGTTAG+AGG + chr2_3:47388943-47388962 Msa0295080:intron 50.0%
CCCTAGGATTTGGGGGAAAA+TGG - chr2_3:47390026-47390045 None:intergenic 50.0%
CGTGAAACCCTAGGATTTGG+GGG - chr2_3:47390033-47390052 None:intergenic 50.0%
! CTCGTTGTCGTGGTGCATTT+TGG + chr2_3:47390431-47390450 Msa0295080:intron 50.0%
GTTTCATGAAGCTGGGCACA+TGG + chr2_3:47391302-47391321 Msa0295080:intron 50.0%
GCTCATGGTGCCTTGGTATT+TGG + chr2_3:47391470-47391489 Msa0295080:intron 50.0%
GGGCCAAAGTCTACAATGGA+AGG - chr2_3:47391879-47391898 None:intergenic 50.0%
GGAAGGGCCAAAGTCTACAA+TGG - chr2_3:47391883-47391902 None:intergenic 50.0%
AGCAACGCTTAACCACCATC+CGG - chr2_3:47392048-47392067 None:intergenic 50.0%
! GCTTTTAGCCGATGTGTTCC+CGG + chr2_3:47392146-47392165 Msa0295080:intron 50.0%
GAAAGATGCCGGGAACACAT+CGG - chr2_3:47392157-47392176 None:intergenic 50.0%
GAACACCTTCCAACTTGAGG+GGG + chr2_3:47392211-47392230 Msa0295080:intron 50.0%
!! ATAGTCCCCCTCAAGTTGGA+AGG - chr2_3:47392219-47392238 None:intergenic 50.0%
GGGGGATTGGGTAACTCAAC+TGG - chr2_3:47387801-47387820 None:intergenic 55.0%
CTAGAAGCTACCGGGGGATT+GGG - chr2_3:47387813-47387832 None:intergenic 55.0%
ACTAGAAGCTACCGGGGGAT+TGG - chr2_3:47387814-47387833 None:intergenic 55.0%
ATGGCCTGCCCCCAATTCAT+TGG - chr2_3:47388631-47388650 None:intergenic 55.0%
GGGTGGTTAGAGGATGTGGT+TGG + chr2_3:47388953-47388972 Msa0295080:CDS 55.0%
AGGATGTGGTTGGCAGCACT+TGG + chr2_3:47388963-47388982 Msa0295080:CDS 55.0%
TCTTGCAGCTCATGGTGCCT+TGG + chr2_3:47391463-47391482 Msa0295080:intron 55.0%
!! TTCTTGTCTCGGCTCGGCAT+TGG + chr2_3:47391770-47391789 Msa0295080:intron 55.0%
GCAGGGGTGGTTAGAGGATG+TGG + chr2_3:47388949-47388968 Msa0295080:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 47384019 47392528 47384019 ID=Msa0295080;Name=Msa0295080
chr2_3 mRNA 47384019 47392528 47384019 ID=Msa0295080-mRNA-1;Parent=Msa0295080;Name=Msa0295080-mRNA-1;_AED=0.13;_eAED=0.13;_QI=276|1|1|1|0.62|0.55|9|259|483
chr2_3 exon 47384019 47384226 47384019 ID=Msa0295080-mRNA-1:exon:14794;Parent=Msa0295080-mRNA-1
chr2_3 exon 47384563 47384927 47384563 ID=Msa0295080-mRNA-1:exon:14795;Parent=Msa0295080-mRNA-1
chr2_3 exon 47387143 47387687 47387143 ID=Msa0295080-mRNA-1:exon:14796;Parent=Msa0295080-mRNA-1
chr2_3 exon 47388252 47388338 47388252 ID=Msa0295080-mRNA-1:exon:14797;Parent=Msa0295080-mRNA-1
chr2_3 exon 47388421 47388477 47388421 ID=Msa0295080-mRNA-1:exon:14798;Parent=Msa0295080-mRNA-1
chr2_3 exon 47388617 47388855 47388617 ID=Msa0295080-mRNA-1:exon:14799;Parent=Msa0295080-mRNA-1
chr2_3 exon 47388953 47389071 47388953 ID=Msa0295080-mRNA-1:exon:14800;Parent=Msa0295080-mRNA-1
chr2_3 exon 47389423 47389626 47389423 ID=Msa0295080-mRNA-1:exon:14801;Parent=Msa0295080-mRNA-1
chr2_3 exon 47392366 47392528 47392366 ID=Msa0295080-mRNA-1:exon:14802;Parent=Msa0295080-mRNA-1
chr2_3 five_prime_UTR 47384019 47384226 47384019 ID=Msa0295080-mRNA-1:five_prime_utr;Parent=Msa0295080-mRNA-1
chr2_3 five_prime_UTR 47384563 47384630 47384563 ID=Msa0295080-mRNA-1:five_prime_utr;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47384631 47384927 47384631 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47387143 47387687 47387143 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47388252 47388338 47388252 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47388421 47388477 47388421 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47388617 47388855 47388617 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47388953 47389071 47388953 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 CDS 47389423 47389530 47389423 ID=Msa0295080-mRNA-1:cds;Parent=Msa0295080-mRNA-1
chr2_3 three_prime_UTR 47389531 47389626 47389531 ID=Msa0295080-mRNA-1:three_prime_utr;Parent=Msa0295080-mRNA-1
chr2_3 three_prime_UTR 47392366 47392528 47392366 ID=Msa0295080-mRNA-1:three_prime_utr;Parent=Msa0295080-mRNA-1
Gene Sequence

>Msa0295080

ATGGCAGCAAGTATCATTTCAGACGGCACAGAAACACCTCTATTACTGCCAACAACTCATGATAATGGAAAACAAAACACAAGACCAGAAATGGAGGACAAATGGTGGAACAAAATCTTGGACATGGAGGAAGCCAAACAACAACTCATGTTTTCACTACCAATGATTTTTACAAACTTATTTTATTACTTGATTACTTTGGTTTCTGTCATGCTTGTTGGTCACCTTGGTGAGCTTCAGTTAGCTGGTGCTACTCTTGCTAATTCTTGGTTTAGTGTCACTGGTGTAGCAGTTATGGTTGGTTTAAGTGGTGCACTAGAAACACTCTGTGGACAAGGATTTGGTGCAAAGGAATATCACATGCTGGGAATTTATCTACAAGGCTCTTGCATTATATCTTTTATTTTTTCAATCATTATATCAATTGTTTGGTTCTACACAGAACACATTCTAGTGTTCCTTCACCAATCACCAGACATTGCTAGAACAGCTGCACTCTATATGAAGTTTCTTATACCAGGATTATTTGCATATAGCGTCTTGCAAAACTTGTTGAGGTTTCTACAAACACAATCTGTAGTAATGCCACTGGTTATCCTTTCAGCTATCCCAACATTGATTCATGTTGGAATTGCATATGGATTTGTTCAATGGACAGGTTTGAGTTTCATAGGTGGACCAGTTGCAACTTCTATTTCACTATGGATATCTATGATATTGGTAGGTTTTTATGTCTTGTATGCAAAGAAGTTTGAGAATACATGGAGAGGATTTTCAATGGAGTCATTTCAGTACTTGTATACAAACATGAAACTAGCTCTTCCTTCTGCAGGAATGGTATGTTTGGAGTATTGGGCTTTCGAAATTTTGGTTTTCTTAGCTGGATTAATGCCTGACTCACAAATAACAATTTCATTGATTGCAATATGTGAAAACACAGAATTCATTGCTTACATGATCACTTATGGTCTTAGTGCAGCTGCAAGCACAAGGATTTCCAATGAATTGGGGGCAGGCCATCCTGAAAGAGCTAAACATGCAATGAGAGTCACTCTAAAGCTGTCTGTCCTCCTTGGATTCTGTTTTGTTTTGATGCTTTTGTTTGGTCATGATATATGGATTCAAATGTTTAGTGATAGTCCTATTATCAAACATAAGTTTGCTTCAATAACACCTTTGCTTGCTATTTCCATACTACTAGATTCTGTCCAAGGTGTCTTATCAGGGGTGGTTAGAGGATGTGGTTGGCAGCACTTGGTTGTTTATGTCAACCTTGCCACTTTTTATCTCATTGGTTTACCCATTTCATGTCTCCTTGGATTTAAGACCAATTTGCATTATAAGGGTTTATGGATTGGTCTAATTTGTGGCCTAGTGTGTCAAATTGGGACACTCTTACTTTTGACAAGGCATGCCAAATGGACTAAACTGAATATCTCGGGACAGAGATAA
Protein sequence

>Msa0295080

MAASIISDGTETPLLLPTTHDNGKQNTRPEMEDKWWNKILDMEEAKQQLMFSLPMIFTNLFYYLITLVSVMLVGHLGELQLAGATLANSWFSVTGVAVMVGLSGALETLCGQGFGAKEYHMLGIYLQGSCIISFIFSIIISIVWFYTEHILVFLHQSPDIARTAALYMKFLIPGLFAYSVLQNLLRFLQTQSVVMPLVILSAIPTLIHVGIAYGFVQWTGLSFIGGPVATSISLWISMILVGFYVLYAKKFENTWRGFSMESFQYLYTNMKLALPSAGMVCLEYWAFEILVFLAGLMPDSQITISLIAICENTEFIAYMITYGLSAAASTRISNELGAGHPERAKHAMRVTLKLSVLLGFCFVLMLLFGHDIWIQMFSDSPIIKHKFASITPLLAISILLDSVQGVLSGVVRGCGWQHLVVYVNLATFYLIGLPISCLLGFKTNLHYKGLWIGLICGLVCQIGTLLLLTRHAKWTKLNISGQR*