Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838090 | PNY14214.1 | 76.316 | 570 | 44 | 10 | 1 | 490 | 1 | 559 | 0.0 | 811 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838090 | sp|Q7XJR9|CDPKG_ARATH | 64.789 | 568 | 113 | 8 | 1 | 487 | 1 | 562 | 0.0 | 702 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838090 | Q5D875 | 82.332 | 566 | 22 | 6 | 1 | 494 | 1 | 560 | 0.0 | 918 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0043740 | Msa0838090 | 0.852637 | 4.051998e-61 | -8.615850e-47 |
Msa0090090 | Msa0838090 | 0.862929 | 3.576391e-64 | -8.615850e-47 |
Msa0662580 | Msa0838090 | 0.823574 | 1.287424e-53 | -8.615850e-47 |
Msa0758850 | Msa0838090 | 0.841070 | 5.936570e-58 | -8.615850e-47 |
Msa0785120 | Msa0838090 | 0.816016 | 6.871663e-52 | -8.615850e-47 |
Msa0838090 | Msa1031460 | 0.806713 | 7.196035e-50 | -8.615850e-47 |
Msa0838090 | Msa1043120 | 0.822171 | 2.731983e-53 | -8.615850e-47 |
Msa0838090 | Msa1207890 | 0.851324 | 9.560839e-61 | -8.615850e-47 |
Msa0838090 | Msa1429050 | 0.924969 | 3.455776e-90 | -8.615850e-47 |
Msa0838090 | Msa1447870 | 0.802718 | 4.911175e-49 | -8.615850e-47 |
Msa0137560 | Msa0838090 | 0.859065 | 5.352951e-63 | -8.615850e-47 |
Msa0182560 | Msa0838090 | 0.847988 | 8.159192e-60 | -8.615850e-47 |
Msa0408340 | Msa0838090 | 0.839571 | 1.463430e-57 | -8.615850e-47 |
Msa0480930 | Msa0838090 | 0.847764 | 9.404501e-60 | -8.615850e-47 |
Msa0335080 | Msa0838090 | 0.815813 | 7.626186e-52 | -8.615850e-47 |
Msa0501410 | Msa0838090 | 0.834343 | 3.166198e-56 | -8.615850e-47 |
Msa0558390 | Msa0838090 | 0.800774 | 1.230666e-48 | -8.615850e-47 |
Msa0567430 | Msa0838090 | 0.821387 | 4.147868e-53 | -8.615850e-47 |
Msa0567460 | Msa0838090 | 0.800149 | 1.649966e-48 | -8.615850e-47 |
Msa0578350 | Msa0838090 | 0.810602 | 1.062105e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838090 | MtrunA17_Chr5g0405421 | 82.332 | 566 | 22 | 6 | 1 | 494 | 1 | 560 | 0.0 | 918 |
Msa0838090 | MtrunA17_Chr5g0444171 | 37.500 | 456 | 206 | 7 | 92 | 477 | 86 | 532 | 7.87e-103 | 318 |
Msa0838090 | MtrunA17_Chr8g0374701 | 35.245 | 593 | 265 | 14 | 1 | 487 | 1 | 580 | 8.47e-102 | 317 |
Msa0838090 | MtrunA17_Chr4g0045261 | 41.215 | 461 | 197 | 9 | 88 | 478 | 127 | 583 | 5.26e-101 | 315 |
Msa0838090 | MtrunA17_Chr5g0441691 | 37.637 | 457 | 198 | 10 | 92 | 474 | 62 | 505 | 6.10e-101 | 313 |
Msa0838090 | MtrunA17_Chr1g0157131 | 36.522 | 460 | 213 | 7 | 98 | 487 | 74 | 524 | 2.09e-99 | 308 |
Msa0838090 | MtrunA17_Chr1g0170281 | 35.250 | 539 | 265 | 9 | 13 | 479 | 33 | 559 | 3.25e-99 | 310 |
Msa0838090 | MtrunA17_Chr5g0402551 | 39.177 | 462 | 207 | 8 | 87 | 478 | 123 | 580 | 5.75e-98 | 307 |
Msa0838090 | MtrunA17_Chr4g0074811 | 36.842 | 456 | 209 | 7 | 92 | 477 | 85 | 531 | 2.80e-97 | 303 |
Msa0838090 | MtrunA17_Chr3g0127571 | 40.169 | 473 | 203 | 8 | 88 | 492 | 128 | 588 | 7.34e-97 | 304 |
Msa0838090 | MtrunA17_Chr0c02g0489761 | 37.527 | 461 | 201 | 9 | 92 | 478 | 72 | 519 | 7.44e-97 | 302 |
Msa0838090 | MtrunA17_Chr8g0387671 | 36.481 | 466 | 209 | 9 | 98 | 493 | 66 | 514 | 4.02e-96 | 300 |
Msa0838090 | MtrunA17_Chr3g0131181 | 37.124 | 466 | 212 | 10 | 98 | 492 | 29 | 484 | 5.97e-95 | 297 |
Msa0838090 | MtrunA17_Chr1g0176751 | 34.054 | 555 | 257 | 12 | 28 | 482 | 25 | 570 | 6.66e-95 | 299 |
Msa0838090 | MtrunA17_Chr3g0098951 | 35.837 | 466 | 208 | 9 | 92 | 478 | 78 | 531 | 3.51e-94 | 295 |
Msa0838090 | MtrunA17_Chr5g0397101 | 36.076 | 474 | 218 | 10 | 77 | 475 | 41 | 504 | 7.05e-94 | 294 |
Msa0838090 | MtrunA17_Chr7g0276111 | 38.445 | 463 | 210 | 8 | 88 | 481 | 134 | 590 | 6.65e-93 | 294 |
Msa0838090 | MtrunA17_Chr7g0242561 | 34.469 | 499 | 247 | 9 | 51 | 478 | 9 | 498 | 7.20e-93 | 292 |
Msa0838090 | MtrunA17_Chr8g0385341 | 36.463 | 458 | 211 | 8 | 98 | 484 | 30 | 478 | 1.84e-92 | 290 |
Msa0838090 | MtrunA17_Chr7g0256001 | 39.485 | 466 | 209 | 7 | 83 | 478 | 126 | 588 | 1.94e-92 | 293 |
Msa0838090 | MtrunA17_Chr7g0267751 | 34.270 | 534 | 261 | 13 | 11 | 475 | 60 | 572 | 1.25e-89 | 286 |
Msa0838090 | MtrunA17_Chr1g0200601 | 35.268 | 448 | 212 | 7 | 97 | 475 | 29 | 467 | 8.34e-88 | 278 |
Msa0838090 | MtrunA17_Chr1g0176421 | 37.215 | 438 | 194 | 9 | 92 | 460 | 158 | 583 | 1.75e-87 | 281 |
Msa0838090 | MtrunA17_Chr5g0448721 | 34.292 | 452 | 219 | 7 | 98 | 480 | 96 | 538 | 1.88e-87 | 279 |
Msa0838090 | MtrunA17_Chr1g0173541 | 34.802 | 454 | 216 | 8 | 96 | 478 | 50 | 494 | 4.04e-87 | 277 |
Msa0838090 | MtrunA17_Chr4g0059951 | 32.150 | 535 | 270 | 9 | 15 | 478 | 3 | 515 | 1.08e-85 | 274 |
Msa0838090 | MtrunA17_Chr7g0257751 | 34.423 | 459 | 217 | 8 | 93 | 478 | 53 | 500 | 1.51e-84 | 270 |
Msa0838090 | MtrunA17_Chr4g0033371 | 32.604 | 457 | 224 | 10 | 94 | 478 | 69 | 513 | 5.46e-77 | 251 |
Msa0838090 | MtrunA17_Chr4g0074791 | 32.895 | 456 | 217 | 9 | 92 | 477 | 89 | 525 | 6.58e-74 | 243 |
Msa0838090 | MtrunA17_Chr7g0267771 | 33.434 | 332 | 147 | 7 | 94 | 358 | 84 | 408 | 7.83e-50 | 177 |
Msa0838090 | MtrunA17_Chr5g0444191 | 56.757 | 111 | 45 | 1 | 200 | 310 | 73 | 180 | 1.37e-38 | 139 |
Msa0838090 | MtrunA17_Chr8g0355131 | 28.608 | 395 | 206 | 14 | 136 | 471 | 127 | 504 | 3.09e-35 | 137 |
Msa0838090 | MtrunA17_Chr1g0203881 | 29.771 | 262 | 117 | 4 | 97 | 293 | 40 | 299 | 8.73e-32 | 127 |
Msa0838090 | MtrunA17_Chr3g0132591 | 28.777 | 278 | 137 | 5 | 71 | 293 | 89 | 360 | 8.27e-31 | 124 |
Msa0838090 | MtrunA17_Chr1g0190131 | 35.106 | 188 | 98 | 4 | 136 | 302 | 89 | 273 | 1.49e-30 | 119 |
Msa0838090 | MtrunA17_Chr7g0274941 | 31.383 | 188 | 98 | 5 | 136 | 297 | 96 | 278 | 2.55e-25 | 105 |
Msa0838090 | MtrunA17_Chr2g0304111 | 27.068 | 266 | 122 | 6 | 97 | 296 | 22 | 281 | 2.55e-23 | 102 |
Msa0838090 | MtrunA17_Chr5g0432491 | 26.316 | 266 | 124 | 6 | 97 | 296 | 22 | 281 | 5.49e-22 | 98.6 |
Msa0838090 | MtrunA17_Chr6g0453681 | 29.167 | 264 | 118 | 6 | 94 | 294 | 15 | 272 | 7.05e-22 | 98.6 |
Msa0838090 | MtrunA17_Chr8g0346071 | 26.894 | 264 | 123 | 7 | 97 | 296 | 16 | 273 | 7.30e-22 | 97.8 |
Msa0838090 | MtrunA17_Chr6g0468751 | 29.008 | 262 | 117 | 6 | 94 | 292 | 15 | 270 | 9.10e-22 | 98.2 |
Msa0838090 | MtrunA17_Chr4g0013131 | 26.277 | 274 | 129 | 7 | 96 | 303 | 10 | 276 | 1.30e-21 | 97.4 |
Msa0838090 | MtrunA17_Chr5g0441011 | 26.515 | 264 | 122 | 6 | 98 | 295 | 13 | 270 | 3.63e-21 | 95.9 |
Msa0838090 | MtrunA17_Chr4g0001331 | 28.195 | 266 | 118 | 8 | 97 | 296 | 19 | 277 | 3.77e-21 | 95.9 |
Msa0838090 | MtrunA17_Chr8g0346081 | 26.761 | 284 | 131 | 8 | 77 | 296 | 3 | 273 | 1.14e-20 | 94.4 |
Msa0838090 | MtrunA17_Chr3g0140631 | 27.341 | 267 | 126 | 9 | 98 | 302 | 37 | 297 | 1.55e-20 | 92.0 |
Msa0838090 | MtrunA17_Chr2g0302431 | 26.692 | 266 | 123 | 6 | 97 | 296 | 19 | 278 | 1.68e-20 | 94.0 |
Msa0838090 | MtrunA17_Chr3g0132671 | 33.702 | 181 | 92 | 6 | 138 | 296 | 130 | 304 | 4.76e-20 | 93.2 |
Msa0838090 | MtrunA17_Chr1g0150321 | 26.692 | 266 | 122 | 8 | 97 | 296 | 12 | 270 | 6.31e-20 | 92.0 |
Msa0838090 | MtrunA17_Chr4g0069301 | 31.148 | 183 | 95 | 5 | 139 | 296 | 108 | 284 | 6.63e-20 | 92.0 |
Msa0838090 | MtrunA17_Chr8g0351491 | 26.538 | 260 | 127 | 8 | 98 | 297 | 16 | 271 | 1.57e-19 | 88.6 |
Msa0838090 | MtrunA17_Chr2g0284031 | 25.188 | 266 | 126 | 6 | 97 | 296 | 30 | 288 | 2.91e-19 | 90.5 |
Msa0838090 | MtrunA17_Chr5g0441771 | 37.500 | 104 | 45 | 1 | 259 | 362 | 18 | 101 | 3.70e-19 | 82.8 |
Msa0838090 | MtrunA17_Chr8g0379091 | 25.468 | 267 | 125 | 7 | 97 | 296 | 25 | 284 | 1.59e-18 | 88.2 |
Msa0838090 | MtrunA17_Chr3g0114511 | 24.308 | 325 | 158 | 10 | 97 | 342 | 31 | 346 | 2.23e-18 | 87.4 |
Msa0838090 | MtrunA17_Chr4g0072831 | 27.232 | 224 | 129 | 6 | 97 | 294 | 9 | 224 | 2.55e-18 | 85.9 |
Msa0838090 | MtrunA17_Chr3g0125381 | 28.191 | 188 | 105 | 7 | 139 | 302 | 34 | 215 | 2.11e-17 | 81.3 |
Msa0838090 | MtrunA17_Chr1g0166281 | 29.870 | 154 | 96 | 5 | 329 | 476 | 1 | 148 | 2.74e-17 | 79.0 |
Msa0838090 | MtrunA17_Chr8g0353621 | 27.132 | 258 | 120 | 10 | 98 | 293 | 10 | 261 | 2.96e-17 | 82.0 |
Msa0838090 | MtrunA17_Chr3g0107051 | 24.812 | 266 | 127 | 6 | 97 | 296 | 20 | 278 | 3.32e-17 | 84.0 |
Msa0838090 | MtrunA17_Chr4g0045371 | 25.000 | 264 | 123 | 8 | 97 | 292 | 22 | 278 | 1.20e-16 | 81.6 |
Msa0838090 | MtrunA17_Chr4g0074111 | 27.027 | 222 | 93 | 4 | 82 | 237 | 2 | 220 | 1.64e-16 | 81.3 |
Msa0838090 | MtrunA17_Chr3g0131061 | 27.778 | 180 | 102 | 5 | 139 | 292 | 82 | 259 | 1.74e-16 | 80.9 |
Msa0838090 | MtrunA17_Chr8g0374571 | 22.500 | 360 | 183 | 12 | 83 | 356 | 9 | 358 | 1.84e-15 | 77.8 |
Msa0838090 | MtrunA17_Chr1g0188171 | 27.922 | 154 | 99 | 5 | 329 | 476 | 1 | 148 | 8.71e-15 | 71.6 |
Msa0838090 | MtrunA17_Chr6g0460211 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 6.47e-14 | 69.3 |
Msa0838090 | MtrunA17_Chr5g0440931 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 7.56e-14 | 68.9 |
Msa0838090 | MtrunA17_Chr1g0188031 | 26.738 | 187 | 106 | 5 | 134 | 295 | 99 | 279 | 1.74e-13 | 72.4 |
Msa0838090 | MtrunA17_Chr7g0254731 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 2.63e-13 | 67.4 |
Msa0838090 | MtrunA17_Chr3g0093271 | 26.974 | 152 | 99 | 4 | 329 | 474 | 52 | 197 | 9.06e-13 | 67.4 |
Msa0838090 | MtrunA17_Chr7g0274101 | 29.114 | 158 | 92 | 5 | 329 | 476 | 1 | 148 | 1.48e-12 | 65.5 |
Msa0838090 | MtrunA17_Chr8g0366401 | 28.758 | 153 | 100 | 3 | 333 | 479 | 10 | 159 | 5.56e-12 | 63.9 |
Msa0838090 | MtrunA17_Chr1g0185001 | 27.632 | 152 | 97 | 4 | 329 | 474 | 1 | 145 | 5.57e-12 | 63.5 |
Msa0838090 | MtrunA17_Chr5g0402361 | 31.056 | 161 | 92 | 5 | 324 | 474 | 30 | 181 | 9.30e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838090 | AT2G17890.1 | 64.789 | 568 | 113 | 8 | 1 | 487 | 1 | 562 | 0.0 | 702 |
Msa0838090 | AT5G66210.1 | 64.738 | 553 | 94 | 7 | 1 | 488 | 1 | 517 | 0.0 | 696 |
Msa0838090 | AT5G66210.2 | 64.738 | 553 | 94 | 7 | 1 | 488 | 1 | 517 | 0.0 | 696 |
Msa0838090 | AT4G36070.1 | 62.681 | 552 | 114 | 6 | 1 | 487 | 1 | 525 | 0.0 | 671 |
Msa0838090 | AT4G36070.2 | 62.681 | 552 | 114 | 6 | 1 | 487 | 1 | 525 | 0.0 | 671 |
Msa0838090 | AT5G66210.5 | 63.511 | 507 | 84 | 7 | 1 | 442 | 1 | 471 | 0.0 | 623 |
Msa0838090 | AT5G66210.3 | 63.511 | 507 | 84 | 7 | 1 | 442 | 1 | 471 | 0.0 | 623 |
Msa0838090 | AT5G66210.6 | 59.778 | 450 | 80 | 7 | 1 | 385 | 1 | 414 | 3.02e-180 | 512 |
Msa0838090 | AT5G66210.4 | 59.778 | 450 | 80 | 7 | 1 | 385 | 1 | 414 | 3.02e-180 | 512 |
Msa0838090 | AT3G10660.2 | 36.735 | 539 | 245 | 10 | 29 | 491 | 128 | 646 | 2.32e-105 | 328 |
Msa0838090 | AT3G10660.1 | 36.735 | 539 | 245 | 10 | 29 | 491 | 128 | 646 | 2.32e-105 | 328 |
Msa0838090 | AT5G12180.1 | 35.229 | 545 | 249 | 12 | 1 | 475 | 1 | 511 | 3.33e-105 | 324 |
Msa0838090 | AT5G04870.1 | 36.090 | 532 | 258 | 9 | 21 | 479 | 69 | 591 | 5.40e-103 | 321 |
Msa0838090 | AT5G19360.1 | 37.418 | 457 | 207 | 8 | 92 | 478 | 62 | 509 | 3.82e-102 | 316 |
Msa0838090 | AT1G50700.1 | 38.137 | 451 | 200 | 7 | 98 | 478 | 73 | 514 | 9.70e-102 | 315 |
Msa0838090 | AT3G50530.1 | 40.558 | 466 | 203 | 8 | 83 | 478 | 133 | 594 | 1.54e-100 | 314 |
Msa0838090 | AT4G21940.1 | 35.273 | 567 | 251 | 17 | 1 | 477 | 1 | 541 | 3.38e-100 | 312 |
Msa0838090 | AT3G20410.2 | 37.694 | 451 | 202 | 7 | 98 | 478 | 91 | 532 | 4.54e-100 | 311 |
Msa0838090 | AT3G20410.1 | 37.694 | 451 | 202 | 7 | 98 | 478 | 91 | 532 | 4.54e-100 | 311 |
Msa0838090 | AT4G21940.2 | 35.273 | 567 | 251 | 17 | 1 | 477 | 1 | 541 | 8.49e-100 | 311 |
Msa0838090 | AT4G23650.1 | 38.190 | 453 | 201 | 8 | 96 | 478 | 76 | 519 | 1.88e-99 | 309 |
Msa0838090 | AT1G61950.1 | 34.829 | 557 | 267 | 12 | 1 | 478 | 1 | 540 | 5.68e-98 | 306 |
Msa0838090 | AT4G04720.2 | 38.074 | 457 | 203 | 8 | 92 | 478 | 74 | 520 | 2.25e-97 | 304 |
Msa0838090 | AT4G04720.1 | 38.074 | 457 | 203 | 8 | 92 | 478 | 74 | 520 | 2.25e-97 | 304 |
Msa0838090 | AT1G50700.2 | 36.059 | 477 | 200 | 8 | 98 | 478 | 73 | 540 | 2.00e-96 | 302 |
Msa0838090 | AT1G49580.1 | 37.645 | 518 | 245 | 9 | 42 | 486 | 93 | 605 | 7.04e-96 | 302 |
Msa0838090 | AT5G23580.1 | 37.086 | 453 | 207 | 8 | 92 | 475 | 16 | 459 | 7.45e-96 | 299 |
Msa0838090 | AT1G76040.2 | 36.819 | 459 | 210 | 8 | 93 | 481 | 107 | 555 | 5.42e-94 | 296 |
Msa0838090 | AT3G50530.2 | 37.425 | 497 | 206 | 8 | 83 | 478 | 133 | 625 | 2.34e-93 | 296 |
Msa0838090 | AT1G50700.3 | 38.903 | 401 | 171 | 6 | 98 | 433 | 73 | 464 | 9.06e-93 | 290 |
Msa0838090 | AT3G19100.1 | 36.994 | 519 | 250 | 9 | 30 | 478 | 79 | 590 | 1.74e-92 | 293 |
Msa0838090 | AT1G35670.1 | 36.689 | 447 | 205 | 7 | 98 | 475 | 26 | 463 | 2.26e-92 | 290 |
Msa0838090 | AT4G09570.1 | 36.242 | 447 | 207 | 7 | 98 | 475 | 25 | 462 | 7.80e-92 | 289 |
Msa0838090 | AT3G51850.1 | 34.917 | 484 | 234 | 9 | 66 | 478 | 23 | 496 | 8.07e-92 | 290 |
Msa0838090 | AT4G21940.3 | 35.521 | 518 | 223 | 16 | 1 | 433 | 1 | 492 | 3.51e-91 | 286 |
Msa0838090 | AT2G38910.1 | 35.841 | 452 | 212 | 7 | 98 | 480 | 134 | 576 | 4.33e-91 | 289 |
Msa0838090 | AT4G04740.4 | 40.000 | 380 | 190 | 7 | 136 | 487 | 149 | 518 | 4.40e-91 | 287 |
Msa0838090 | AT4G04740.6 | 40.000 | 380 | 190 | 7 | 136 | 487 | 149 | 518 | 4.40e-91 | 287 |
Msa0838090 | AT4G04740.5 | 40.000 | 380 | 190 | 7 | 136 | 487 | 149 | 518 | 4.40e-91 | 287 |
Msa0838090 | AT4G04740.3 | 40.000 | 380 | 190 | 7 | 136 | 487 | 149 | 518 | 4.40e-91 | 287 |
Msa0838090 | AT4G04740.1 | 40.000 | 380 | 190 | 7 | 136 | 487 | 149 | 518 | 4.40e-91 | 287 |
Msa0838090 | AT4G04740.7 | 40.000 | 380 | 190 | 7 | 136 | 487 | 149 | 518 | 4.40e-91 | 287 |
Msa0838090 | AT2G41140.1 | 37.053 | 475 | 219 | 9 | 80 | 478 | 99 | 569 | 6.09e-88 | 281 |
Msa0838090 | AT3G56760.1 | 37.961 | 461 | 212 | 9 | 88 | 478 | 114 | 570 | 6.95e-88 | 281 |
Msa0838090 | AT4G38230.4 | 34.735 | 452 | 217 | 7 | 98 | 480 | 24 | 466 | 3.40e-87 | 276 |
Msa0838090 | AT4G38230.3 | 34.735 | 452 | 217 | 7 | 98 | 480 | 24 | 466 | 3.40e-87 | 276 |
Msa0838090 | AT4G38230.2 | 34.735 | 452 | 217 | 7 | 98 | 480 | 54 | 496 | 6.69e-87 | 276 |
Msa0838090 | AT2G17290.1 | 34.061 | 458 | 222 | 8 | 98 | 484 | 85 | 533 | 1.13e-86 | 276 |
Msa0838090 | AT2G17290.2 | 34.061 | 458 | 222 | 8 | 98 | 484 | 85 | 533 | 1.13e-86 | 276 |
Msa0838090 | AT3G51850.2 | 35.747 | 442 | 205 | 9 | 66 | 440 | 23 | 452 | 3.21e-86 | 274 |
Msa0838090 | AT1G76040.3 | 37.500 | 408 | 180 | 7 | 93 | 435 | 107 | 504 | 6.08e-86 | 273 |
Msa0838090 | AT4G35310.2 | 33.843 | 458 | 223 | 8 | 98 | 484 | 97 | 545 | 2.24e-85 | 273 |
Msa0838090 | AT4G35310.1 | 33.843 | 458 | 223 | 8 | 98 | 484 | 97 | 545 | 2.24e-85 | 273 |
Msa0838090 | AT2G46700.1 | 38.312 | 462 | 208 | 9 | 88 | 479 | 133 | 587 | 3.17e-85 | 274 |
Msa0838090 | AT5G12480.1 | 33.913 | 460 | 219 | 9 | 93 | 478 | 54 | 502 | 3.05e-84 | 270 |
Msa0838090 | AT5G24430.1 | 37.313 | 469 | 218 | 9 | 83 | 481 | 126 | 588 | 1.12e-83 | 270 |
Msa0838090 | AT4G04740.2 | 40.510 | 353 | 172 | 7 | 136 | 460 | 149 | 491 | 1.30e-83 | 268 |
Msa0838090 | AT4G04700.1 | 34.498 | 458 | 220 | 8 | 93 | 478 | 23 | 472 | 2.86e-83 | 266 |
Msa0838090 | AT2G41860.2 | 32.885 | 520 | 247 | 11 | 35 | 478 | 3 | 496 | 1.12e-82 | 266 |
Msa0838090 | AT2G41860.1 | 32.885 | 520 | 247 | 11 | 35 | 478 | 3 | 496 | 1.44e-82 | 265 |
Msa0838090 | AT5G19450.2 | 33.042 | 457 | 227 | 7 | 93 | 478 | 52 | 500 | 2.71e-82 | 265 |
Msa0838090 | AT5G19450.1 | 33.042 | 457 | 227 | 7 | 93 | 478 | 52 | 500 | 2.71e-82 | 265 |
Msa0838090 | AT4G04695.1 | 35.371 | 458 | 216 | 11 | 93 | 478 | 23 | 472 | 1.74e-81 | 261 |
Msa0838090 | AT2G46700.2 | 39.604 | 404 | 206 | 7 | 100 | 479 | 17 | 406 | 4.42e-81 | 258 |
Msa0838090 | AT2G46700.3 | 39.604 | 404 | 206 | 7 | 100 | 479 | 17 | 406 | 4.42e-81 | 258 |
Msa0838090 | AT1G74740.1 | 33.735 | 498 | 243 | 12 | 53 | 478 | 19 | 501 | 5.69e-81 | 261 |
Msa0838090 | AT3G57530.1 | 33.551 | 459 | 222 | 9 | 92 | 478 | 57 | 504 | 1.58e-80 | 260 |
Msa0838090 | AT3G49370.1 | 35.205 | 463 | 226 | 8 | 87 | 481 | 131 | 587 | 5.43e-78 | 255 |
Msa0838090 | AT2G31500.1 | 32.096 | 458 | 224 | 8 | 97 | 478 | 65 | 511 | 2.30e-77 | 253 |
Msa0838090 | AT1G18890.1 | 33.775 | 453 | 220 | 8 | 97 | 478 | 62 | 505 | 4.59e-75 | 246 |
Msa0838090 | AT4G04710.1 | 33.763 | 465 | 220 | 10 | 92 | 477 | 30 | 485 | 3.78e-74 | 243 |
Msa0838090 | AT4G04710.2 | 33.843 | 458 | 216 | 10 | 92 | 477 | 30 | 472 | 4.77e-74 | 242 |
Msa0838090 | AT1G76040.1 | 42.160 | 287 | 153 | 4 | 200 | 481 | 39 | 317 | 7.97e-74 | 236 |
Msa0838090 | AT1G76040.4 | 42.160 | 287 | 153 | 4 | 200 | 481 | 39 | 317 | 7.97e-74 | 236 |
Msa0838090 | AT5G12480.2 | 36.415 | 357 | 186 | 7 | 154 | 478 | 61 | 408 | 1.98e-73 | 239 |
Msa0838090 | AT4G04710.4 | 33.619 | 467 | 220 | 12 | 92 | 477 | 30 | 487 | 2.35e-73 | 241 |
Msa0838090 | AT3G51850.3 | 34.080 | 402 | 196 | 7 | 49 | 385 | 6 | 403 | 3.17e-73 | 238 |
Msa0838090 | AT2G35890.2 | 33.081 | 396 | 193 | 7 | 85 | 414 | 122 | 511 | 1.32e-72 | 239 |
Msa0838090 | AT2G35890.1 | 33.081 | 396 | 193 | 7 | 85 | 414 | 122 | 511 | 1.32e-72 | 239 |
Msa0838090 | AT4G38230.1 | 41.197 | 284 | 156 | 3 | 201 | 480 | 46 | 322 | 5.87e-72 | 232 |
Msa0838090 | AT4G04710.3 | 37.366 | 372 | 188 | 9 | 136 | 477 | 102 | 458 | 1.94e-71 | 234 |
Msa0838090 | AT3G57530.2 | 34.897 | 341 | 155 | 4 | 92 | 367 | 57 | 395 | 4.00e-65 | 217 |
Msa0838090 | AT1G12580.1 | 31.852 | 270 | 117 | 4 | 97 | 301 | 43 | 310 | 5.17e-35 | 137 |
Msa0838090 | AT1G12680.1 | 29.496 | 278 | 135 | 5 | 71 | 293 | 84 | 355 | 1.20e-30 | 124 |
Msa0838090 | AT1G08650.1 | 36.264 | 182 | 92 | 5 | 142 | 301 | 102 | 281 | 7.84e-30 | 118 |
Msa0838090 | AT1G30270.1 | 27.509 | 269 | 123 | 6 | 97 | 299 | 30 | 292 | 8.92e-26 | 110 |
Msa0838090 | AT1G30270.2 | 27.509 | 269 | 123 | 6 | 97 | 299 | 30 | 292 | 1.16e-25 | 110 |
Msa0838090 | AT1G08650.2 | 35.882 | 170 | 85 | 5 | 142 | 289 | 102 | 269 | 2.44e-24 | 102 |
Msa0838090 | AT5G21326.1 | 27.170 | 265 | 121 | 7 | 97 | 295 | 12 | 270 | 2.22e-23 | 102 |
Msa0838090 | AT5G25110.1 | 27.170 | 265 | 120 | 7 | 97 | 295 | 42 | 299 | 1.21e-22 | 101 |
Msa0838090 | AT1G30270.3 | 30.688 | 189 | 100 | 5 | 136 | 299 | 13 | 195 | 1.54e-22 | 99.8 |
Msa0838090 | AT5G10930.1 | 26.692 | 266 | 121 | 6 | 97 | 295 | 11 | 269 | 1.83e-22 | 100 |
Msa0838090 | AT1G01140.2 | 27.170 | 265 | 123 | 5 | 98 | 296 | 19 | 279 | 2.09e-22 | 100 |
Msa0838090 | AT2G30360.1 | 27.239 | 268 | 122 | 5 | 97 | 297 | 20 | 281 | 2.46e-22 | 99.8 |
Msa0838090 | AT4G18700.1 | 26.316 | 266 | 123 | 6 | 97 | 296 | 25 | 283 | 1.00e-21 | 98.6 |
Msa0838090 | AT3G04530.1 | 32.203 | 177 | 98 | 4 | 142 | 297 | 98 | 273 | 1.01e-21 | 95.5 |
Msa0838090 | AT5G45810.1 | 25.564 | 266 | 125 | 6 | 97 | 296 | 27 | 285 | 1.40e-21 | 97.8 |
Msa0838090 | AT1G01140.1 | 26.792 | 265 | 122 | 6 | 98 | 296 | 19 | 277 | 1.63e-21 | 97.4 |
Msa0838090 | AT1G01140.3 | 26.792 | 265 | 122 | 6 | 98 | 296 | 19 | 277 | 1.69e-21 | 97.4 |
Msa0838090 | AT3G01090.2 | 29.231 | 260 | 115 | 7 | 98 | 294 | 42 | 295 | 3.07e-21 | 97.4 |
Msa0838090 | AT1G29230.1 | 25.940 | 266 | 124 | 6 | 97 | 296 | 73 | 331 | 3.53e-21 | 97.1 |
Msa0838090 | AT3G01090.3 | 29.231 | 260 | 115 | 7 | 98 | 294 | 19 | 272 | 3.57e-21 | 97.1 |
Msa0838090 | AT3G01090.1 | 29.231 | 260 | 115 | 7 | 98 | 294 | 19 | 272 | 3.57e-21 | 97.1 |
Msa0838090 | AT5G21222.1 | 26.038 | 265 | 124 | 6 | 97 | 295 | 12 | 270 | 8.09e-21 | 96.7 |
Msa0838090 | AT5G21222.2 | 26.038 | 265 | 124 | 6 | 97 | 295 | 12 | 270 | 8.09e-21 | 96.7 |
Msa0838090 | AT5G21222.4 | 26.038 | 265 | 124 | 6 | 97 | 295 | 12 | 270 | 8.09e-21 | 96.7 |
Msa0838090 | AT5G21222.3 | 26.038 | 265 | 124 | 6 | 97 | 295 | 12 | 270 | 8.09e-21 | 96.7 |
Msa0838090 | AT5G39440.1 | 25.455 | 275 | 128 | 8 | 98 | 308 | 19 | 280 | 1.46e-20 | 95.1 |
Msa0838090 | AT2G26980.1 | 26.136 | 264 | 123 | 6 | 97 | 294 | 13 | 270 | 1.70e-20 | 93.6 |
Msa0838090 | AT2G26980.3 | 23.981 | 417 | 219 | 12 | 97 | 427 | 13 | 417 | 1.78e-20 | 94.4 |
Msa0838090 | AT3G29160.3 | 28.462 | 260 | 117 | 6 | 98 | 294 | 20 | 273 | 1.94e-20 | 93.2 |
Msa0838090 | AT2G26980.4 | 24.010 | 404 | 215 | 11 | 97 | 414 | 23 | 420 | 2.01e-20 | 94.4 |
Msa0838090 | AT2G26980.5 | 26.136 | 264 | 123 | 6 | 97 | 294 | 13 | 270 | 2.93e-20 | 93.6 |
Msa0838090 | AT4G30960.1 | 27.170 | 265 | 120 | 8 | 97 | 295 | 23 | 280 | 3.45e-20 | 93.6 |
Msa0838090 | AT3G29160.1 | 28.462 | 260 | 117 | 6 | 98 | 294 | 20 | 273 | 6.96e-20 | 92.8 |
Msa0838090 | AT3G29160.2 | 28.462 | 260 | 117 | 6 | 98 | 294 | 20 | 273 | 6.96e-20 | 92.8 |
Msa0838090 | AT2G45490.1 | 26.199 | 271 | 136 | 7 | 98 | 308 | 22 | 288 | 1.22e-19 | 89.7 |
Msa0838090 | AT3G17510.1 | 25.379 | 264 | 125 | 6 | 97 | 294 | 19 | 276 | 1.23e-19 | 91.7 |
Msa0838090 | AT1G48260.1 | 26.515 | 264 | 122 | 7 | 97 | 294 | 10 | 267 | 1.55e-18 | 88.2 |
Msa0838090 | AT2G38490.1 | 26.838 | 272 | 126 | 8 | 97 | 302 | 27 | 291 | 1.99e-18 | 87.8 |
Msa0838090 | AT3G17510.2 | 29.348 | 184 | 99 | 5 | 136 | 294 | 19 | 196 | 3.81e-18 | 86.3 |
Msa0838090 | AT1G48260.2 | 31.551 | 187 | 96 | 6 | 134 | 294 | 2 | 182 | 4.19e-18 | 86.3 |
Msa0838090 | AT1G48260.4 | 31.551 | 187 | 96 | 6 | 134 | 294 | 2 | 182 | 4.19e-18 | 86.3 |
Msa0838090 | AT1G48260.3 | 31.551 | 187 | 96 | 6 | 134 | 294 | 2 | 182 | 4.19e-18 | 86.3 |
Msa0838090 | AT1G48260.5 | 31.551 | 187 | 96 | 6 | 134 | 294 | 2 | 182 | 4.19e-18 | 86.3 |
Msa0838090 | AT2G25880.1 | 26.038 | 265 | 128 | 9 | 98 | 300 | 25 | 283 | 5.24e-18 | 84.7 |
Msa0838090 | AT2G25880.4 | 26.038 | 265 | 128 | 9 | 98 | 300 | 38 | 296 | 6.61e-18 | 84.7 |
Msa0838090 | AT2G26980.2 | 26.613 | 248 | 110 | 6 | 97 | 278 | 13 | 254 | 1.03e-17 | 83.6 |
Msa0838090 | AT2G34180.1 | 25.188 | 266 | 126 | 7 | 97 | 296 | 56 | 314 | 1.67e-17 | 85.5 |
Msa0838090 | AT2G25880.3 | 26.038 | 265 | 128 | 9 | 98 | 300 | 86 | 344 | 1.97e-17 | 84.0 |
Msa0838090 | AT5G45820.1 | 24.088 | 274 | 135 | 7 | 96 | 303 | 10 | 276 | 2.71e-17 | 84.7 |
Msa0838090 | AT5G58380.1 | 24.436 | 266 | 128 | 6 | 97 | 296 | 11 | 269 | 3.38e-17 | 84.7 |
Msa0838090 | AT4G32830.1 | 26.038 | 265 | 132 | 9 | 98 | 302 | 31 | 291 | 4.00e-17 | 82.4 |
Msa0838090 | AT4G37010.2 | 29.932 | 147 | 91 | 4 | 340 | 480 | 31 | 171 | 1.40e-15 | 75.1 |
Msa0838090 | AT4G37010.1 | 29.932 | 147 | 91 | 4 | 340 | 480 | 27 | 167 | 1.77e-15 | 74.7 |
Msa0838090 | AT5G66880.1 | 25.379 | 264 | 122 | 8 | 97 | 292 | 21 | 277 | 1.90e-15 | 78.2 |
Msa0838090 | AT5G66880.2 | 25.379 | 264 | 122 | 8 | 97 | 292 | 21 | 277 | 1.90e-15 | 78.2 |
Msa0838090 | AT3G23000.1 | 24.265 | 272 | 134 | 6 | 97 | 302 | 24 | 289 | 4.83e-15 | 77.4 |
Msa0838090 | AT2G27030.3 | 27.500 | 160 | 104 | 4 | 329 | 482 | 1 | 154 | 2.04e-14 | 72.0 |
Msa0838090 | AT1G78290.3 | 24.906 | 265 | 124 | 9 | 96 | 292 | 2 | 259 | 2.36e-14 | 74.7 |
Msa0838090 | AT1G78290.2 | 24.906 | 265 | 124 | 9 | 96 | 292 | 2 | 259 | 2.36e-14 | 74.7 |
Msa0838090 | AT2G25880.2 | 25.105 | 239 | 131 | 8 | 98 | 300 | 25 | 251 | 3.18e-14 | 73.2 |
Msa0838090 | AT3G50500.1 | 23.552 | 259 | 133 | 7 | 97 | 292 | 22 | 278 | 3.73e-14 | 74.3 |
Msa0838090 | AT4G14640.1 | 28.000 | 150 | 96 | 5 | 331 | 474 | 4 | 147 | 6.36e-14 | 69.7 |
Msa0838090 | AT3G56800.1 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 6.75e-14 | 69.7 |
Msa0838090 | AT2G41110.1 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 6.75e-14 | 69.7 |
Msa0838090 | AT2G27030.1 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 6.75e-14 | 69.7 |
Msa0838090 | AT3G22930.1 | 30.405 | 148 | 91 | 5 | 333 | 474 | 28 | 169 | 7.06e-14 | 70.1 |
Msa0838090 | AT3G50360.1 | 27.703 | 148 | 95 | 4 | 340 | 481 | 27 | 168 | 7.34e-14 | 70.1 |
Msa0838090 | AT5G21274.1 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 8.94e-14 | 69.3 |
Msa0838090 | AT3G43810.1 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 8.94e-14 | 69.3 |
Msa0838090 | AT2G41090.1 | 29.560 | 159 | 95 | 5 | 329 | 480 | 1 | 149 | 2.05e-13 | 69.3 |
Msa0838090 | AT1G66410.1 | 26.974 | 152 | 99 | 4 | 329 | 474 | 1 | 146 | 3.17e-13 | 67.8 |
Msa0838090 | AT5G37780.1 | 26.974 | 152 | 99 | 4 | 329 | 474 | 1 | 146 | 3.17e-13 | 67.8 |
Msa0838090 | AT3G43810.2 | 27.632 | 152 | 98 | 4 | 329 | 474 | 1 | 146 | 3.57e-13 | 69.3 |
Msa0838090 | AT2G43290.1 | 29.677 | 155 | 96 | 5 | 339 | 483 | 64 | 215 | 3.95e-12 | 66.2 |
Msa0838090 | AT1G18530.1 | 29.801 | 151 | 96 | 4 | 335 | 479 | 2 | 148 | 8.58e-12 | 63.9 |
Msa0838090 | AT2G41110.2 | 25.610 | 164 | 98 | 5 | 329 | 474 | 1 | 158 | 2.61e-11 | 62.4 |
Msa0838090 | AT4G14640.2 | 29.134 | 127 | 78 | 5 | 354 | 474 | 9 | 129 | 6.00e-11 | 60.8 |
Find 134 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGATGATGATTCTTCTTC+TGG | 0.087186 | 5_4:-12317526 | None:intergenic |
GCACAGGAGATCATCTTAAA+AGG | 0.219330 | 5_4:-12323059 | None:intergenic |
TTCTTCTATTCTATCCAAAA+TGG | 0.245641 | 5_4:+12323376 | Msa0838090:three_prime_UTR |
AACTTAAATTATATTGAATA+TGG | 0.258326 | 5_4:+12323154 | Msa0838090:three_prime_UTR |
CTTAAAAGTCTCCTGAATTC+TGG | 0.264973 | 5_4:-12322922 | None:intergenic |
GACTTCCGTTTCAACACTTC+TGG | 0.287482 | 5_4:-12319987 | None:intergenic |
TTGTTGGGTCATGGACAATT+TGG | 0.288939 | 5_4:+12317653 | Msa0838090:CDS |
CAAACTGCCGCATGTTGTTT+AGG | 0.291679 | 5_4:-12321493 | None:intergenic |
TTGTTGACGGATTCCGTTTA+CGG | 0.291809 | 5_4:-12317418 | None:intergenic |
CTTTCCATCTTTGTCAATAT+CGG | 0.302823 | 5_4:-12322890 | None:intergenic |
TACGGAACAAGCCTGATTTC+CGG | 0.312294 | 5_4:+12320288 | Msa0838090:CDS |
ATACTCCATACATCTGATTC+AGG | 0.313024 | 5_4:-12320014 | None:intergenic |
TTTGTGGGAGACGGCCATTT+TGG | 0.314883 | 5_4:+12320060 | Msa0838090:CDS |
ACCCTGTTTGGATTGGCTTC+AGG | 0.325271 | 5_4:+12323252 | Msa0838090:three_prime_UTR |
TAGTTACACATTACATGTTA+TGG | 0.328740 | 5_4:-12323344 | None:intergenic |
CATGGTTTCCGCCGGAAATC+AGG | 0.334285 | 5_4:-12320299 | None:intergenic |
TCCTCAGTCTTATCCCAAAA+TGG | 0.342848 | 5_4:-12320074 | None:intergenic |
TTGATGATGATTCTTCTTCT+GGG | 0.356316 | 5_4:-12317525 | None:intergenic |
TTTAGGACAGATATATCAAT+TGG | 0.370204 | 5_4:-12321476 | None:intergenic |
GTTGGTGTTGATAAATCTAA+TGG | 0.377050 | 5_4:+12317686 | Msa0838090:CDS |
AGATCAGCTTACCAGAATTC+AGG | 0.379096 | 5_4:+12322911 | Msa0838090:CDS |
TAGAGTGTATAGACCCTGTT+TGG | 0.382161 | 5_4:+12323240 | Msa0838090:three_prime_UTR |
ATTGAAACAATTTGCATTGA+GGG | 0.394547 | 5_4:+12321529 | Msa0838090:CDS |
TCAGTGTCATTTACATGGTT+TGG | 0.399228 | 5_4:+12319467 | Msa0838090:CDS |
TCTTCTACAAAGGTTGTTAG+TGG | 0.400286 | 5_4:+12317362 | Msa0838090:CDS |
CACGGCGGCGCCGACAGCGG+CGG | 0.401963 | 5_4:+12317460 | Msa0838090:CDS |
GGTCAAGTTCACTGGAATAT+TGG | 0.402948 | 5_4:+12319517 | Msa0838090:CDS |
TGACCGTTGCTGCCACTTGT+CGG | 0.405708 | 5_4:-12322200 | None:intergenic |
CGCCGCTGTCGGCGCCGCCG+TGG | 0.406324 | 5_4:-12317459 | None:intergenic |
TACTTTACATGTGCATCAAT+TGG | 0.420658 | 5_4:+12322165 | Msa0838090:CDS |
AGAATCATCATCAACATCAT+AGG | 0.429261 | 5_4:+12317534 | Msa0838090:CDS |
TTCTGCTTCGCCGCCGCTGT+CGG | 0.431290 | 5_4:-12317470 | None:intergenic |
CTTGGGAAATTGTTGGGTCA+TGG | 0.431665 | 5_4:+12317644 | Msa0838090:CDS |
TACCTGAAGCCAATCCAAAC+AGG | 0.432128 | 5_4:-12323254 | None:intergenic |
ACAACAATGATAACCGTAAA+CGG | 0.439168 | 5_4:+12317405 | Msa0838090:CDS |
AGAGGTGAGGTCAAGTTCAC+TGG | 0.441742 | 5_4:+12319509 | Msa0838090:CDS |
AAGATGCCGCCGTGGTTGTA+AGG | 0.443119 | 5_4:+12319424 | Msa0838090:CDS |
AGTGAACTTGACCTCACCTC+TGG | 0.443872 | 5_4:-12319507 | None:intergenic |
TGCAATCTCTTGCCATTCCA+TGG | 0.446108 | 5_4:+12323123 | Msa0838090:three_prime_UTR |
GAAGTGTTGAAACGGAAGTC+AGG | 0.446630 | 5_4:+12319990 | Msa0838090:CDS |
TCCTTCGATGACGTAGAGTT+GGG | 0.447157 | 5_4:-12322978 | None:intergenic |
GAACTTACTTGTTTAGTATC+CGG | 0.448169 | 5_4:-12319245 | None:intergenic |
ACTGGAATATTGGAGCAATA+TGG | 0.451744 | 5_4:+12319527 | Msa0838090:CDS |
AGATCCTCGGGCAAGATTAA+CGG | 0.454512 | 5_4:+12320373 | Msa0838090:CDS |
GTTGAAAGAATCCCGTGTAT+TGG | 0.454593 | 5_4:+12321878 | Msa0838090:CDS |
CACATCATATGCAGGTCTTA+CGG | 0.458216 | 5_4:+12320270 | Msa0838090:intron |
TGAGAAATTTGACATAGATA+AGG | 0.458341 | 5_4:+12322234 | Msa0838090:CDS |
GACTGAGGATGGTATCTTCA+AGG | 0.458505 | 5_4:+12320088 | Msa0838090:CDS |
TCACATACATATTGCTTTGT+GGG | 0.459172 | 5_4:+12320045 | Msa0838090:CDS |
AACCACGGCGGCGCCGACAG+CGG | 0.462663 | 5_4:+12317457 | Msa0838090:CDS |
CAAACCATTCTGAGTTCCTC+TGG | 0.463445 | 5_4:-12322271 | None:intergenic |
AGATATATCAATTGGAATCT+CGG | 0.473615 | 5_4:-12321468 | None:intergenic |
TGTATAGACCCTGTTTGGAT+TGG | 0.474116 | 5_4:+12323245 | Msa0838090:three_prime_UTR |
GTTGATTCCGTGGTTGTTGA+CGG | 0.474973 | 5_4:-12317431 | None:intergenic |
GGCAAGATTAACGGCTGCTC+AGG | 0.475765 | 5_4:+12320382 | Msa0838090:CDS |
CGGGATTCTTTCAACTTCCA+CGG | 0.477884 | 5_4:-12321870 | None:intergenic |
ATCCTTCGATGACGTAGAGT+TGG | 0.479740 | 5_4:-12322979 | None:intergenic |
GCATTACTTATGGTTGGCCA+TGG | 0.480416 | 5_4:-12320317 | None:intergenic |
TGATATTTACAGCACATCCA+TGG | 0.485240 | 5_4:+12321423 | Msa0838090:intron |
TACTCCAGAGGAACTCAGAA+TGG | 0.488220 | 5_4:+12322267 | Msa0838090:CDS |
CACAGGAGATCATCTTAAAA+GGG | 0.496481 | 5_4:-12323058 | None:intergenic |
ACGGTTATCATTGTTGTTTG+TGG | 0.502090 | 5_4:-12317399 | None:intergenic |
GCAGCTCAGTGTCATTTACA+TGG | 0.502325 | 5_4:+12319462 | Msa0838090:CDS |
CAGGCCCTGAATCAGATGTA+TGG | 0.503892 | 5_4:+12320009 | Msa0838090:CDS |
CAAGTGGCAGCAACGGTCAC+AGG | 0.507672 | 5_4:+12322204 | Msa0838090:CDS |
CTGATTTCCGGCGGAAACCA+TGG | 0.509164 | 5_4:+12320300 | Msa0838090:CDS |
AGTTTCAGAGTTCCATGGAA+TGG | 0.510077 | 5_4:-12323135 | None:intergenic |
CATAGGTTAAAAGACAAAAC+AGG | 0.510784 | 5_4:+12317551 | Msa0838090:CDS |
TCTCCTCCTTCTCTAACCCA+TGG | 0.520704 | 5_4:-12321440 | None:intergenic |
ATCACATACATATTGCTTTG+TGG | 0.521561 | 5_4:+12320044 | Msa0838090:CDS |
GGCGGCGAAGCAGAAACAAA+CGG | 0.522528 | 5_4:+12317478 | Msa0838090:CDS |
AAATTTGACATAGATAAGGA+TGG | 0.522800 | 5_4:+12322238 | Msa0838090:CDS |
TTTACATGTGCATCAATTGG+AGG | 0.524461 | 5_4:+12322168 | Msa0838090:CDS |
TACTCCATACATCTGATTCA+GGG | 0.533810 | 5_4:-12320013 | None:intergenic |
ATTTAAGTTTCAGAGTTCCA+TGG | 0.534473 | 5_4:-12323140 | None:intergenic |
CAATTTGGTTATACTTATGT+TGG | 0.538577 | 5_4:+12317668 | Msa0838090:CDS |
ATTGTTGGTAAAAGATCCTC+GGG | 0.539145 | 5_4:+12320361 | Msa0838090:CDS |
TTTGCAGCATTACTTATGGT+TGG | 0.544195 | 5_4:-12320323 | None:intergenic |
CAGATTGACAGCAACACAGA+TGG | 0.546135 | 5_4:+12322112 | Msa0838090:intron |
GATTGAAACAATTTGCATTG+AGG | 0.548938 | 5_4:+12321528 | Msa0838090:CDS |
CACGGAATCAACAGCAACCA+CGG | 0.549875 | 5_4:+12317442 | Msa0838090:CDS |
ACATATTGCTTTGTGGGAGA+CGG | 0.551692 | 5_4:+12320051 | Msa0838090:CDS |
GAATCAGATGTATGGAGTAT+TGG | 0.553750 | 5_4:+12320017 | Msa0838090:CDS |
AATTGTTGGTAAAAGATCCT+CGG | 0.555130 | 5_4:+12320360 | Msa0838090:CDS |
GAAGCCGATATTGACAAAGA+TGG | 0.555955 | 5_4:+12322886 | Msa0838090:CDS |
CATCCATGGGTTAGAGAAGG+AGG | 0.556794 | 5_4:+12321437 | Msa0838090:CDS |
TAGTCTTGAAGAGATGAGAC+AGG | 0.557378 | 5_4:+12321732 | Msa0838090:CDS |
CGGCATCTTTCTCAGTATAA+CGG | 0.560775 | 5_4:-12319410 | None:intergenic |
TCGCACCAGAAGTGTTGAAA+CGG | 0.562183 | 5_4:+12319982 | Msa0838090:CDS |
TTTATTAGGTTATGCGAAGG+TGG | 0.566134 | 5_4:+12319210 | Msa0838090:intron |
GATATTTACAGCACATCCAT+GGG | 0.572368 | 5_4:+12321424 | Msa0838090:intron |
CGTGGTTGCTGTTGATTCCG+TGG | 0.575237 | 5_4:-12317441 | None:intergenic |
TTCCTCGAGCAGAGGATCGA+TGG | 0.576634 | 5_4:-12322866 | None:intergenic |
TGATTCAAACGAGAGAGTGT+TGG | 0.578002 | 5_4:+12323031 | Msa0838090:three_prime_UTR |
GGCTTCAACACAATCTGCAC+AGG | 0.579949 | 5_4:-12323075 | None:intergenic |
GGGATTCTTTCAACTTCCAC+GGG | 0.581407 | 5_4:-12321869 | None:intergenic |
GTGTTAAAAGCTTAGTCTAG+AGG | 0.588978 | 5_4:+12323196 | Msa0838090:three_prime_UTR |
GGTTCTAGACATGTTCCTTG+TGG | 0.589064 | 5_4:+12317572 | Msa0838090:CDS |
AATATGGCGTCGTCTTGCAA+AGG | 0.591969 | 5_4:+12323170 | Msa0838090:three_prime_UTR |
TAAAGTAGCTGCTACAAACT+CGG | 0.593573 | 5_4:-12322149 | None:intergenic |
TACTTTATTAGGTTATGCGA+AGG | 0.595183 | 5_4:+12319207 | Msa0838090:intron |
TGGTTGGCCATGGTTTCCGC+CGG | 0.595352 | 5_4:-12320307 | None:intergenic |
TCAGTTTGATGCAATAGATG+TGG | 0.605404 | 5_4:+12321693 | Msa0838090:CDS |
GCCCAACTCTACGTCATCGA+AGG | 0.607386 | 5_4:+12322977 | Msa0838090:CDS |
ACTCCGACAAGTGGCAGCAA+CGG | 0.608487 | 5_4:+12322197 | Msa0838090:CDS |
TTCCATCGATCCTCTGCTCG+AGG | 0.609417 | 5_4:+12322864 | Msa0838090:CDS |
ACGGAATCCGTCAACAACCA+CGG | 0.618750 | 5_4:+12317424 | Msa0838090:CDS |
GCACATCCATGGGTTAGAGA+AGG | 0.618750 | 5_4:+12321434 | Msa0838090:intron |
GCTTAGATGTGTTTCAGAGG+CGG | 0.621865 | 5_4:+12323005 | Msa0838090:exon |
AATTTGACATAGATAAGGAT+GGG | 0.621957 | 5_4:+12322239 | Msa0838090:CDS |
CTAGCTTAGATGTGTTTCAG+AGG | 0.622053 | 5_4:+12323002 | Msa0838090:exon |
AAGGTGGAGAACTACTAGAC+CGG | 0.629818 | 5_4:+12319226 | Msa0838090:CDS |
ATATCGGCTTCCTCGAGCAG+AGG | 0.629872 | 5_4:-12322874 | None:intergenic |
CTTGCAATATCTCCAATACA+CGG | 0.630159 | 5_4:-12321890 | None:intergenic |
ATGGGTTAGAGAAGGAGGAG+AGG | 0.640326 | 5_4:+12321442 | Msa0838090:CDS |
CTCTTGCTAAAGATCTCCCG+TGG | 0.641688 | 5_4:+12321853 | Msa0838090:CDS |
TACTGAGAAAGATGCCGCCG+TGG | 0.643392 | 5_4:+12319416 | Msa0838090:CDS |
TTGCAATATCTCCAATACAC+GGG | 0.645052 | 5_4:-12321889 | None:intergenic |
ACCTGAAGCCAATCCAAACA+GGG | 0.646091 | 5_4:-12323253 | None:intergenic |
AGGAACATGACTCCGACAAG+TGG | 0.654427 | 5_4:+12322188 | Msa0838090:CDS |
TGTATTGGAGATATTGCAAG+CGG | 0.661649 | 5_4:+12321893 | Msa0838090:CDS |
GGTTGTAAGGCAGATGCTGA+AGG | 0.665253 | 5_4:+12319437 | Msa0838090:CDS |
GCGACATGAAGCCAGAGGTG+AGG | 0.666615 | 5_4:+12319496 | Msa0838090:CDS |
TATCTGTCCTAAACAACATG+CGG | 0.667622 | 5_4:+12321486 | Msa0838090:CDS |
GGATGGGTATATTACTCCAG+AGG | 0.671648 | 5_4:+12322255 | Msa0838090:CDS |
CAGCATCTGCCTTACAACCA+CGG | 0.677207 | 5_4:-12319433 | None:intergenic |
CTGCAGAGCATATATCACAA+TGG | 0.682620 | 5_4:-12323096 | None:intergenic |
GGAACAAGCCTGATTTCCGG+CGG | 0.694537 | 5_4:+12320291 | Msa0838090:CDS |
GCAGCCGTTAATCTTGCCCG+AGG | 0.704131 | 5_4:-12320377 | None:intergenic |
ACATCGCGACATGAAGCCAG+AGG | 0.708034 | 5_4:+12319491 | Msa0838090:CDS |
TGAGGATGGTATCTTCAAGG+AGG | 0.730235 | 5_4:+12320091 | Msa0838090:CDS |
TTGGCTAGCACACTTAACGA+AGG | 0.730382 | 5_4:+12321649 | Msa0838090:CDS |
GGAATCAACAGCAACCACGG+CGG | 0.754861 | 5_4:+12317445 | Msa0838090:CDS |
CATCTGCCTTACAACCACGG+CGG | 0.799342 | 5_4:-12319430 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTATGTTTTTTTTTTTTTT+TGG | + | chr5_4:12318032-12318051 | Msa0838090:intron | 10.0% |
!!! | ATTTTCTATCTATTTTTTTA+AGG | + | chr5_4:12320160-12320179 | Msa0838090:intron | 10.0% |
!!! | AAATTTATACATTTAGAATA+TGG | - | chr5_4:12321333-12321352 | None:intergenic | 10.0% |
!! | AACTTAAATTATATTGAATA+TGG | + | chr5_4:12323154-12323173 | Msa0838090:three_prime_UTR | 10.0% |
!!! | TTTTTTTTTTTTTTCCATTT+TGG | - | chr5_4:12323393-12323412 | None:intergenic | 10.0% |
!! | GGAAAAAAAAAAAAAAAAAA+AGG | + | chr5_4:12323397-12323416 | Msa0838090:three_prime_UTR | 10.0% |
!!! | CAATATTTAGATTTTGTTAT+TGG | + | chr5_4:12317816-12317835 | Msa0838090:intron | 15.0% |
!!! | ATCAATTTTTGTTATGTTTT+TGG | + | chr5_4:12317895-12317914 | Msa0838090:intron | 15.0% |
!!! | TGTTTTTTTTTTTTTTTGGT+TGG | + | chr5_4:12318036-12318055 | Msa0838090:intron | 15.0% |
!! | TGAAAAAAATAAGGAAAATA+GGG | - | chr5_4:12319034-12319053 | None:intergenic | 15.0% |
!! | ATGAAAAAAATAAGGAAAAT+AGG | - | chr5_4:12319035-12319054 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTTGAAGGAAA+AGG | - | chr5_4:12320206-12320225 | None:intergenic | 15.0% |
!!! | AGACTTTTTTTTTTTTTTGA+AGG | - | chr5_4:12320212-12320231 | None:intergenic | 15.0% |
!!! | TTAATGCAAAGTTTTAAAAA+AGG | - | chr5_4:12320756-12320775 | None:intergenic | 15.0% |
!!! | TTTATGTTTTTCTTCTACAA+AGG | + | chr5_4:12317352-12317371 | Msa0838090:CDS | 20.0% |
!!! | TTAGATTTTGTTATTGGTTT+TGG | + | chr5_4:12317822-12317841 | Msa0838090:intron | 20.0% |
!!! | TTGTTATGTTTTTGGATTTT+TGG | + | chr5_4:12317903-12317922 | Msa0838090:intron | 20.0% |
!!! | TGTTATGTTTTTGGATTTTT+GGG | + | chr5_4:12317904-12317923 | Msa0838090:intron | 20.0% |
!!! | TATTGTTAAGTTGATTGTAA+AGG | + | chr5_4:12317975-12317994 | Msa0838090:intron | 20.0% |
!!! | ATTGTTAAGTTGATTGTAAA+GGG | + | chr5_4:12317976-12317995 | Msa0838090:intron | 20.0% |
!! | AAAACCATATTACAATCAAA+TGG | - | chr5_4:12318155-12318174 | None:intergenic | 20.0% |
!!! | TGTAATATGGTTTTTAATTG+TGG | + | chr5_4:12318161-12318180 | Msa0838090:intron | 20.0% |
!! | AAATAACTTAAAAGATTTGG+AGG | - | chr5_4:12318274-12318293 | None:intergenic | 20.0% |
!! | GTCAAATAACTTAAAAGATT+TGG | - | chr5_4:12318277-12318296 | None:intergenic | 20.0% |
!! | AAATTATGAATAAATGTGGT+TGG | + | chr5_4:12318305-12318324 | Msa0838090:intron | 20.0% |
!!! | TTCATTTAAAATCAAATAGC+AGG | - | chr5_4:12318742-12318761 | None:intergenic | 20.0% |
!! | AAAAAAATAAGGAAAATAGG+GGG | - | chr5_4:12319032-12319051 | None:intergenic | 20.0% |
!! | GAAAAAAATAAGGAAAATAG+GGG | - | chr5_4:12319033-12319052 | None:intergenic | 20.0% |
!! | TGAGAACAATGAAAAAAATA+AGG | - | chr5_4:12319043-12319062 | None:intergenic | 20.0% |
!! | TATTTAACTGCAATAAATTC+TGG | + | chr5_4:12319078-12319097 | Msa0838090:intron | 20.0% |
!!! | TAAATTCTGGATTTATCTTT+TGG | + | chr5_4:12319091-12319110 | Msa0838090:intron | 20.0% |
!! | TATTAATTCATGTCCTTTAA+AGG | - | chr5_4:12320241-12320260 | None:intergenic | 20.0% |
!! | TCTCATAATAAGAAATAAGT+TGG | - | chr5_4:12320422-12320441 | None:intergenic | 20.0% |
!!! | ACTTATTTCTTATTATGAGA+AGG | + | chr5_4:12320422-12320441 | Msa0838090:intron | 20.0% |
!!! | AATGTAATCATTTTTAGGAA+TGG | - | chr5_4:12320471-12320490 | None:intergenic | 20.0% |
!! | ATGAAAAATAATTGAACACT+CGG | - | chr5_4:12320646-12320665 | None:intergenic | 20.0% |
!! | GGAGAAATAGAAAAAATTTA+AGG | + | chr5_4:12320901-12320920 | Msa0838090:intron | 20.0% |
!!! | TTTATCTCTTTTTAGATAAC+TGG | - | chr5_4:12321021-12321040 | None:intergenic | 20.0% |
!! | AGTTATCTAAAAAGAGATAA+AGG | + | chr5_4:12321020-12321039 | Msa0838090:intron | 20.0% |
!! | GTTATCTAAAAAGAGATAAA+GGG | + | chr5_4:12321021-12321040 | Msa0838090:intron | 20.0% |
!!! | AGTTTCTTCTAATAGAATTT+TGG | + | chr5_4:12321157-12321176 | Msa0838090:intron | 20.0% |
!! | AATTCTATTAGAAGAAACTA+CGG | - | chr5_4:12321156-12321175 | None:intergenic | 20.0% |
!!! | AGTTTCTTCTAATAGAATTT+TGG | + | chr5_4:12321157-12321176 | Msa0838090:intron | 20.0% |
!!! | AAATTTTAGAAGTGGAATAA+GGG | - | chr5_4:12321973-12321992 | None:intergenic | 20.0% |
!!! | TTTCTTTCAAATTTTAGAAG+TGG | - | chr5_4:12321981-12322000 | None:intergenic | 20.0% |
!! | AAATTTGAAAGAAAGTTTGT+TGG | + | chr5_4:12321987-12322006 | Msa0838090:intron | 20.0% |
!! | TTTATCATAAAAACTGTTCA+GGG | - | chr5_4:12322317-12322336 | None:intergenic | 20.0% |
!!! | TTTTATCATAAAAACTGTTC+AGG | - | chr5_4:12322318-12322337 | None:intergenic | 20.0% |
!! | AATAACAGAAACATTGATAA+GGG | - | chr5_4:12322399-12322418 | None:intergenic | 20.0% |
!!! | TTCAAAATGATCTTTGAAAT+TGG | + | chr5_4:12322583-12322602 | Msa0838090:intron | 20.0% |
!!! | AGCTAATATAATTTTCTGTT+TGG | + | chr5_4:12322816-12322835 | Msa0838090:intron | 20.0% |
!! | TTTGATAAGAGATTTTCTCT+TGG | + | chr5_4:12317626-12317645 | Msa0838090:CDS | 25.0% |
!! | TTGATAAGAGATTTTCTCTT+GGG | + | chr5_4:12317627-12317646 | Msa0838090:CDS | 25.0% |
! | CAATTTGGTTATACTTATGT+TGG | + | chr5_4:12317668-12317687 | Msa0838090:CDS | 25.0% |
!!! | TTGTTATTGGTTTTGGTTAT+TGG | + | chr5_4:12317829-12317848 | Msa0838090:intron | 25.0% |
!!! | TGTTATTGGTTTTGGTTATT+GGG | + | chr5_4:12317830-12317849 | Msa0838090:intron | 25.0% |
!!! | ATGAGATTTTGTTTTTGTGA+TGG | + | chr5_4:12317866-12317885 | Msa0838090:intron | 25.0% |
!!! | ATTTTTGGGATTGTAAGATA+AGG | + | chr5_4:12317918-12317937 | Msa0838090:intron | 25.0% |
!!! | TTTTAAGTTATTTGACGTTG+TGG | + | chr5_4:12318281-12318300 | Msa0838090:intron | 25.0% |
!! | TTTAAGTTATTTGACGTTGT+GGG | + | chr5_4:12318282-12318301 | Msa0838090:intron | 25.0% |
! | TGGGAAATTATGAATAAATG+TGG | + | chr5_4:12318301-12318320 | Msa0838090:intron | 25.0% |
! | AAAATGGAATAAAAAGAGAG+GGG | - | chr5_4:12318434-12318453 | None:intergenic | 25.0% |
! | GAAAATGGAATAAAAAGAGA+GGG | - | chr5_4:12318435-12318454 | None:intergenic | 25.0% |
! | AGAAAATGGAATAAAAAGAG+AGG | - | chr5_4:12318436-12318455 | None:intergenic | 25.0% |
! | AGAAACTGGAAAAAAGAAAA+TGG | - | chr5_4:12318450-12318469 | None:intergenic | 25.0% |
! | AAGATATTGAAAGAACTTAC+AGG | + | chr5_4:12318926-12318945 | Msa0838090:intron | 25.0% |
! | TTCATATGTGTACATAGTTA+TGG | + | chr5_4:12318991-12319010 | Msa0838090:intron | 25.0% |
! | AAAAAATAAGGAAAATAGGG+GGG | - | chr5_4:12319031-12319050 | None:intergenic | 25.0% |
! | GCTTGACAATTTACTTTATT+AGG | + | chr5_4:12319196-12319215 | Msa0838090:intron | 25.0% |
! | AGAACATGTCTAATACATAA+GGG | - | chr5_4:12319732-12319751 | None:intergenic | 25.0% |
! | AAGAACATGTCTAATACATA+AGG | - | chr5_4:12319733-12319752 | None:intergenic | 25.0% |
!!! | GAATTTTCTGTTTGTTATGT+TGG | + | chr5_4:12320137-12320156 | Msa0838090:intron | 25.0% |
!! | AAAGTCTTTGTTTCCTTTAA+AGG | + | chr5_4:12320225-12320244 | Msa0838090:intron | 25.0% |
!! | AGATTTTGTGAAGAAATTGT+TGG | + | chr5_4:12320346-12320365 | Msa0838090:CDS | 25.0% |
!!! | CGACAAATGTAATCATTTTT+AGG | - | chr5_4:12320476-12320495 | None:intergenic | 25.0% |
!!! | CTCTCTCTTCATTTTTAAAA+AGG | - | chr5_4:12320589-12320608 | None:intergenic | 25.0% |
! | TTCGTTATTAAAAGACATGT+TGG | - | chr5_4:12320800-12320819 | None:intergenic | 25.0% |
! | TGCGAATTATTAAAGTGAAA+AGG | + | chr5_4:12320867-12320886 | Msa0838090:intron | 25.0% |
! | GCGAATTATTAAAGTGAAAA+GGG | + | chr5_4:12320868-12320887 | Msa0838090:intron | 25.0% |
! | AGAAAAAATTTAAGGAACCT+AGG | + | chr5_4:12320909-12320928 | Msa0838090:intron | 25.0% |
!!! | AAAAGAGATAAAGGGTATTT+TGG | + | chr5_4:12321029-12321048 | Msa0838090:intron | 25.0% |
!!! | AATTTTGGTTCTTTCAGATT+TGG | + | chr5_4:12321238-12321257 | Msa0838090:intron | 25.0% |
!!! | ATTTTGGTTCTTTCAGATTT+GGG | + | chr5_4:12321239-12321258 | Msa0838090:intron | 25.0% |
! | AGATATATCAATTGGAATCT+CGG | - | chr5_4:12321471-12321490 | None:intergenic | 25.0% |
!! | TTTAGGACAGATATATCAAT+TGG | - | chr5_4:12321479-12321498 | None:intergenic | 25.0% |
! | ATTGAAACAATTTGCATTGA+GGG | + | chr5_4:12321529-12321548 | Msa0838090:CDS | 25.0% |
!!! | CAAATTTTAGAAGTGGAATA+AGG | - | chr5_4:12321974-12321993 | None:intergenic | 25.0% |
! | TGAGAAATTTGACATAGATA+AGG | + | chr5_4:12322234-12322253 | Msa0838090:CDS | 25.0% |
! | AAATTTGACATAGATAAGGA+TGG | + | chr5_4:12322238-12322257 | Msa0838090:CDS | 25.0% |
! | AATTTGACATAGATAAGGAT+GGG | + | chr5_4:12322239-12322258 | Msa0838090:CDS | 25.0% |
! | ATAACAGAAACATTGATAAG+GGG | - | chr5_4:12322398-12322417 | None:intergenic | 25.0% |
! | GAATAACAGAAACATTGATA+AGG | - | chr5_4:12322400-12322419 | None:intergenic | 25.0% |
! | TTAAAAATGATGTACACTGA+TGG | - | chr5_4:12323296-12323315 | None:intergenic | 25.0% |
!!! | TACATCATTTTTAAGTGTCA+GGG | + | chr5_4:12323302-12323321 | Msa0838090:three_prime_UTR | 25.0% |
! | TAGTTACACATTACATGTTA+TGG | - | chr5_4:12323347-12323366 | None:intergenic | 25.0% |
! | TTCTTCTATTCTATCCAAAA+TGG | + | chr5_4:12323376-12323395 | Msa0838090:three_prime_UTR | 25.0% |
ACAACAATGATAACCGTAAA+CGG | + | chr5_4:12317405-12317424 | Msa0838090:CDS | 30.0% | |
!! | TTGATGATGATTCTTCTTCT+GGG | - | chr5_4:12317528-12317547 | None:intergenic | 30.0% |
AGAATCATCATCAACATCAT+AGG | + | chr5_4:12317534-12317553 | Msa0838090:CDS | 30.0% | |
CATAGGTTAAAAGACAAAAC+AGG | + | chr5_4:12317551-12317570 | Msa0838090:CDS | 30.0% | |
! | ATTTTCTCTTGGGAAATTGT+TGG | + | chr5_4:12317637-12317656 | Msa0838090:CDS | 30.0% |
! | TTTTCTCTTGGGAAATTGTT+GGG | + | chr5_4:12317638-12317657 | Msa0838090:CDS | 30.0% |
!! | GTTGGTGTTGATAAATCTAA+TGG | + | chr5_4:12317686-12317705 | Msa0838090:CDS | 30.0% |
CAATAATTTGAGCAAAGTCT+AGG | - | chr5_4:12318068-12318087 | None:intergenic | 30.0% | |
CTAGACTTTGCTCAAATTAT+TGG | + | chr5_4:12318066-12318085 | Msa0838090:intron | 30.0% | |
CAAGCCATTTGATTGTAATA+TGG | + | chr5_4:12318148-12318167 | Msa0838090:intron | 30.0% | |
TGGGAAATTATGAATAAACG+TGG | + | chr5_4:12318207-12318226 | Msa0838090:intron | 30.0% | |
ATTATGAATAAACGTGGTAG+AGG | + | chr5_4:12318213-12318232 | Msa0838090:intron | 30.0% | |
TTATTGTTGTGATGCAGTTA+AGG | + | chr5_4:12318339-12318358 | Msa0838090:intron | 30.0% | |
TAGTTAGAATAAACCCACTT+GGG | + | chr5_4:12318534-12318553 | Msa0838090:intron | 30.0% | |
! | TAGAAAGAGCTCTAGTATAT+AGG | - | chr5_4:12318787-12318806 | None:intergenic | 30.0% |
!!! | GAATCAATCATTGACTTTTG+TGG | + | chr5_4:12318858-12318877 | Msa0838090:intron | 30.0% |
! | AAAACTGAACCACATTTTCA+TGG | - | chr5_4:12318952-12318971 | None:intergenic | 30.0% |
TATTGCAGTTAAATACTGCT+TGG | - | chr5_4:12319073-12319092 | None:intergenic | 30.0% | |
! | ATTCTGGATTTATCTTTTGG+CGG | + | chr5_4:12319094-12319113 | Msa0838090:intron | 30.0% |
TACTTTATTAGGTTATGCGA+AGG | + | chr5_4:12319207-12319226 | Msa0838090:intron | 30.0% | |
GAACTTACTTGTTTAGTATC+CGG | - | chr5_4:12319248-12319267 | None:intergenic | 30.0% | |
ACAAGTAAGTTCTGTTTAGT+TGG | + | chr5_4:12319256-12319275 | Msa0838090:intron | 30.0% | |
!!! | TGGTTTTTTCCTTTTCTAGT+TGG | + | chr5_4:12319276-12319295 | Msa0838090:intron | 30.0% |
!! | AAAAGTAAGTTCTGAGTACA+AGG | - | chr5_4:12319362-12319381 | None:intergenic | 30.0% |
AAGAGGTTTCAAGATATTGT+TGG | + | chr5_4:12319945-12319964 | Msa0838090:intron | 30.0% | |
ATCACATACATATTGCTTTG+TGG | + | chr5_4:12320044-12320063 | Msa0838090:CDS | 30.0% | |
TCACATACATATTGCTTTGT+GGG | + | chr5_4:12320045-12320064 | Msa0838090:CDS | 30.0% | |
AGGAGGTAACTTAATTCTTA+TGG | + | chr5_4:12320108-12320127 | Msa0838090:intron | 30.0% | |
! | ATCTTTTGCAGCATTACTTA+TGG | - | chr5_4:12320330-12320349 | None:intergenic | 30.0% |
! | AATTGTTGGTAAAAGATCCT+CGG | + | chr5_4:12320360-12320379 | Msa0838090:CDS | 30.0% |
TAAAGTGAAAAGGGAAAGAA+AGG | + | chr5_4:12320877-12320896 | Msa0838090:intron | 30.0% | |
!! | GTCATTTTCGAAATTAACAC+AGG | + | chr5_4:12321054-12321073 | Msa0838090:intron | 30.0% |
CATCAGTACAACTAAACATT+AGG | - | chr5_4:12321398-12321417 | None:intergenic | 30.0% | |
GATTGAAACAATTTGCATTG+AGG | + | chr5_4:12321528-12321547 | Msa0838090:CDS | 30.0% | |
AGACACATTAATTCAGTTCA+AGG | + | chr5_4:12321557-12321576 | Msa0838090:intron | 30.0% | |
!!! | CTTGTTTGATGTTGATTTTC+TGG | + | chr5_4:12321604-12321623 | Msa0838090:intron | 30.0% |
!!! | ATGTTGATTTTCTGGTTACT+TGG | + | chr5_4:12321612-12321631 | Msa0838090:intron | 30.0% |
! | AGTGGTGTGATTTGATTTAT+GGG | - | chr5_4:12321761-12321780 | None:intergenic | 30.0% |
! | AAGTGGTGTGATTTGATTTA+TGG | - | chr5_4:12321762-12321781 | None:intergenic | 30.0% |
AGTAATCACTAACAGAAAAG+TGG | - | chr5_4:12321779-12321798 | None:intergenic | 30.0% | |
TAATTTAGTATTCCCTGCTT+TGG | + | chr5_4:12321808-12321827 | Msa0838090:intron | 30.0% | |
TAGTATTTGATATCCTTTGC+AGG | + | chr5_4:12321917-12321936 | Msa0838090:intron | 30.0% | |
TACTTTACATGTGCATCAAT+TGG | + | chr5_4:12322165-12322184 | Msa0838090:CDS | 30.0% | |
AAAATCTACTAGTACATTGC+AGG | - | chr5_4:12322371-12322390 | None:intergenic | 30.0% | |
! | TCAATGTTTCTGTTATTCTG+AGG | + | chr5_4:12322402-12322421 | Msa0838090:intron | 30.0% |
TACAATTTCAGGGCTTAAAA+CGG | - | chr5_4:12322527-12322546 | None:intergenic | 30.0% | |
GTTTAACACCTACAATTTCA+GGG | - | chr5_4:12322537-12322556 | None:intergenic | 30.0% | |
TGTTTAACACCTACAATTTC+AGG | - | chr5_4:12322538-12322557 | None:intergenic | 30.0% | |
ATTCCTAAAGTAGACTTGAA+AGG | + | chr5_4:12322645-12322664 | Msa0838090:intron | 30.0% | |
CTTTCCATCTTTGTCAATAT+CGG | - | chr5_4:12322893-12322912 | None:intergenic | 30.0% | |
! | ATTTAAGTTTCAGAGTTCCA+TGG | - | chr5_4:12323143-12323162 | None:intergenic | 30.0% |
!!! | GTACATCATTTTTAAGTGTC+AGG | + | chr5_4:12323301-12323320 | Msa0838090:three_prime_UTR | 30.0% |
TCTTCTACAAAGGTTGTTAG+TGG | + | chr5_4:12317362-12317381 | Msa0838090:CDS | 35.0% | |
!! | ACGGTTATCATTGTTGTTTG+TGG | - | chr5_4:12317402-12317421 | None:intergenic | 35.0% |
!! | GTTGATGATGATTCTTCTTC+TGG | - | chr5_4:12317529-12317548 | None:intergenic | 35.0% |
TGTTCCTTGTGGAAAAAGAA+CGG | + | chr5_4:12317583-12317602 | Msa0838090:CDS | 35.0% | |
! | AAATCCGTTCTTTTTCCACA+AGG | - | chr5_4:12317590-12317609 | None:intergenic | 35.0% |
!! | TGTGGAAAAAGAACGGATTT+TGG | + | chr5_4:12317590-12317609 | Msa0838090:CDS | 35.0% |
!! | GTGGAAAAAGAACGGATTTT+GGG | + | chr5_4:12317591-12317610 | Msa0838090:CDS | 35.0% |
!!! | TTGGTTTTGGTTATTGGGTT+TGG | + | chr5_4:12317835-12317854 | Msa0838090:intron | 35.0% |
!!! | TGGTTTTGGTTATTGGGTTT+GGG | + | chr5_4:12317836-12317855 | Msa0838090:intron | 35.0% |
GACTTTGCTCAAATTATTGG+TGG | + | chr5_4:12318069-12318088 | Msa0838090:intron | 35.0% | |
TGTTGCATTATTTGACGTTG+TGG | + | chr5_4:12318187-12318206 | Msa0838090:intron | 35.0% | |
GTTGCATTATTTGACGTTGT+GGG | + | chr5_4:12318188-12318207 | Msa0838090:intron | 35.0% | |
! | ATGAATAAATGTGGTTGGTG+TGG | + | chr5_4:12318310-12318329 | Msa0838090:intron | 35.0% |
!! | GGGTCTTTGATTTTCAATTG+TGG | - | chr5_4:12318410-12318429 | None:intergenic | 35.0% |
CTAGTTAGAATAAACCCACT+TGG | + | chr5_4:12318533-12318552 | Msa0838090:intron | 35.0% | |
TGGTTGAGTAATTTCAGATC+TGG | + | chr5_4:12318702-12318721 | Msa0838090:intron | 35.0% | |
TTACATCCTCAACTGCTATA+GGG | - | chr5_4:12318895-12318914 | None:intergenic | 35.0% | |
TTTACATCCTCAACTGCTAT+AGG | - | chr5_4:12318896-12318915 | None:intergenic | 35.0% | |
AGTTGAGGATGTAAAAAGAG+AGG | + | chr5_4:12318901-12318920 | Msa0838090:intron | 35.0% | |
TTTATTAGGTTATGCGAAGG+TGG | + | chr5_4:12319210-12319229 | Msa0838090:intron | 35.0% | |
TCTGAATAGCCAACTAGAAA+AGG | - | chr5_4:12319288-12319307 | None:intergenic | 35.0% | |
AAAAAACACATTGCTGATCC+TGG | - | chr5_4:12319339-12319358 | None:intergenic | 35.0% | |
! | CTACCTCTTCTTTTACAGAA+AGG | + | chr5_4:12319383-12319402 | Msa0838090:intron | 35.0% |
TGTCCTTTCTGTAAAAGAAG+AGG | - | chr5_4:12319389-12319408 | None:intergenic | 35.0% | |
!! | TCAGTGTCATTTACATGGTT+TGG | + | chr5_4:12319467-12319486 | Msa0838090:CDS | 35.0% |
ACTGGAATATTGGAGCAATA+TGG | + | chr5_4:12319527-12319546 | Msa0838090:CDS | 35.0% | |
! | CAAAGAAGATTCAGCTTTGA+AGG | + | chr5_4:12319618-12319637 | Msa0838090:intron | 35.0% |
TTGTCCGATTTCATAAAACC+TGG | + | chr5_4:12319655-12319674 | Msa0838090:intron | 35.0% | |
!! | CTCACCAGGTTTTATGAAAT+CGG | - | chr5_4:12319662-12319681 | None:intergenic | 35.0% |
GATTTCATAAAACCTGGTGA+GGG | + | chr5_4:12319661-12319680 | Msa0838090:intron | 35.0% | |
ATTCCCTCTAATGCCAATTT+AGG | + | chr5_4:12319830-12319849 | Msa0838090:intron | 35.0% | |
CTAAATTAGCCCACCTAAAT+TGG | - | chr5_4:12319846-12319865 | None:intergenic | 35.0% | |
! | CTCTTTGAAAACGAATCTTC+AGG | + | chr5_4:12319921-12319940 | Msa0838090:intron | 35.0% |
AAAACGAATCTTCAGGAAAG+AGG | + | chr5_4:12319928-12319947 | Msa0838090:intron | 35.0% | |
TACTCCATACATCTGATTCA+GGG | - | chr5_4:12320016-12320035 | None:intergenic | 35.0% | |
ATACTCCATACATCTGATTC+AGG | - | chr5_4:12320017-12320036 | None:intergenic | 35.0% | |
GAATCAGATGTATGGAGTAT+TGG | + | chr5_4:12320017-12320036 | Msa0838090:CDS | 35.0% | |
! | AAGGAAACAAAGACTTGTTC+AGG | - | chr5_4:12320187-12320206 | None:intergenic | 35.0% |
TTTGCAGCATTACTTATGGT+TGG | - | chr5_4:12320326-12320345 | None:intergenic | 35.0% | |
! | ATTGTTGGTAAAAGATCCTC+GGG | + | chr5_4:12320361-12320380 | Msa0838090:CDS | 35.0% |
TTTGTCGCTGCTTCAAATTT+AGG | + | chr5_4:12320489-12320508 | Msa0838090:intron | 35.0% | |
TTGTCGCTGCTTCAAATTTA+GGG | + | chr5_4:12320490-12320509 | Msa0838090:intron | 35.0% | |
ATGATGTGAAGATGACAACT+AGG | + | chr5_4:12320689-12320708 | Msa0838090:intron | 35.0% | |
! | TTAAAAGACATGTTGGTCTC+AGG | - | chr5_4:12320793-12320812 | None:intergenic | 35.0% |
ACCTAGGACAAAGAATAACT+TGG | + | chr5_4:12320925-12320944 | Msa0838090:intron | 35.0% | |
AAAGAATTGAGCTGCATGTA+AGG | - | chr5_4:12321089-12321108 | None:intergenic | 35.0% | |
TATGCAAAGCAATTCAAGTG+CGG | - | chr5_4:12321126-12321145 | None:intergenic | 35.0% | |
TTGGTTCATTCAGATTTGAG+TGG | + | chr5_4:12321176-12321195 | Msa0838090:intron | 35.0% | |
TCATTCAGATTTGAGTGGTT+TGG | + | chr5_4:12321181-12321200 | Msa0838090:intron | 35.0% | |
ATGGATGTGCTGTAAATATC+AGG | - | chr5_4:12321424-12321443 | None:intergenic | 35.0% | |
TGATATTTACAGCACATCCA+TGG | + | chr5_4:12321423-12321442 | Msa0838090:intron | 35.0% | |
GATATTTACAGCACATCCAT+GGG | + | chr5_4:12321424-12321443 | Msa0838090:intron | 35.0% | |
TATCTGTCCTAAACAACATG+CGG | + | chr5_4:12321486-12321505 | Msa0838090:CDS | 35.0% | |
TCAGTTTGATGCAATAGATG+TGG | + | chr5_4:12321693-12321712 | Msa0838090:CDS | 35.0% | |
GCAATAGATGTGGACAAAAA+TGG | + | chr5_4:12321703-12321722 | Msa0838090:CDS | 35.0% | |
CAGGGAATACTAAATTACGA+GGG | - | chr5_4:12321805-12321824 | None:intergenic | 35.0% | |
!! | GTCTAAAGTGAAGATTTTGC+AGG | + | chr5_4:12321830-12321849 | Msa0838090:intron | 35.0% |
TTGCAATATCTCCAATACAC+GGG | - | chr5_4:12321892-12321911 | None:intergenic | 35.0% | |
CTTGCAATATCTCCAATACA+CGG | - | chr5_4:12321893-12321912 | None:intergenic | 35.0% | |
TGTATTGGAGATATTGCAAG+CGG | + | chr5_4:12321893-12321912 | Msa0838090:CDS | 35.0% | |
TGATAAGTGCTCGACAAATA+TGG | - | chr5_4:12321949-12321968 | None:intergenic | 35.0% | |
AATGTGCAGATGAGTGATTA+GGG | - | chr5_4:12322080-12322099 | None:intergenic | 35.0% | |
TAAAGTAGCTGCTACAAACT+CGG | - | chr5_4:12322152-12322171 | None:intergenic | 35.0% | |
TTTACATGTGCATCAATTGG+AGG | + | chr5_4:12322168-12322187 | Msa0838090:CDS | 35.0% | |
!! | TTTCTGTTATTCTGAGGTGA+GGG | + | chr5_4:12322408-12322427 | Msa0838090:intron | 35.0% |
!! | GTTTTAAGCCCTGAAATTGT+AGG | + | chr5_4:12322526-12322545 | Msa0838090:intron | 35.0% |
! | ACTCCTTTCAAGTCTACTTT+AGG | - | chr5_4:12322651-12322670 | None:intergenic | 35.0% |
! | AGATCGGACAATTTAGTCTT+TGG | - | chr5_4:12322717-12322736 | None:intergenic | 35.0% |
TGTCCGATCTCTACAATTTA+AGG | + | chr5_4:12322727-12322746 | Msa0838090:intron | 35.0% | |
GTCCGATCTCTACAATTTAA+GGG | + | chr5_4:12322728-12322747 | Msa0838090:intron | 35.0% | |
TCCGATCTCTACAATTTAAG+GGG | + | chr5_4:12322729-12322748 | Msa0838090:intron | 35.0% | |
TCCCCTTAAATTGTAGAGAT+CGG | - | chr5_4:12322733-12322752 | None:intergenic | 35.0% | |
!!! | TGTTTGGCTTTTTAGCATAC+TGG | + | chr5_4:12322832-12322851 | Msa0838090:intron | 35.0% |
! | TTTTAGCATACTGGTATGAG+AGG | + | chr5_4:12322841-12322860 | Msa0838090:intron | 35.0% |
CTTAAAAGTCTCCTGAATTC+TGG | - | chr5_4:12322925-12322944 | None:intergenic | 35.0% | |
!! | CTTTTAAGAACTGCAAGCAT+TGG | + | chr5_4:12322937-12322956 | Msa0838090:CDS | 35.0% |
CACAGGAGATCATCTTAAAA+GGG | - | chr5_4:12323061-12323080 | None:intergenic | 35.0% | |
GTGTTAAAAGCTTAGTCTAG+AGG | + | chr5_4:12323196-12323215 | Msa0838090:three_prime_UTR | 35.0% | |
!! | TTTTAAGTGTCAGGGTTTTC+TGG | + | chr5_4:12323310-12323329 | Msa0838090:three_prime_UTR | 35.0% |
!! | TTGTTGACGGATTCCGTTTA+CGG | - | chr5_4:12317421-12317440 | None:intergenic | 40.0% |
TTGTTGGGTCATGGACAATT+TGG | + | chr5_4:12317653-12317672 | Msa0838090:CDS | 40.0% | |
!!! | AGCTTTTTCGAGTCGCTTAA+CGG | - | chr5_4:12317723-12317742 | None:intergenic | 40.0% |
TAAGCGACTCGAAAAAGCTA+AGG | + | chr5_4:12317724-12317743 | Msa0838090:CDS | 40.0% | |
ATGCAATTATTGTCGCGATG+CGG | + | chr5_4:12318239-12318258 | Msa0838090:intron | 40.0% | |
!! | TCACAACGTACAAGTTTTGG+AGG | - | chr5_4:12318368-12318387 | None:intergenic | 40.0% |
TGGAATAAAAAGAGAGGGGA+GGG | - | chr5_4:12318430-12318449 | None:intergenic | 40.0% | |
ATGGAATAAAAAGAGAGGGG+AGG | - | chr5_4:12318431-12318450 | None:intergenic | 40.0% | |
ACAACTGATGAACACAATGG+CGG | - | chr5_4:12318474-12318493 | None:intergenic | 40.0% | |
ACTATCATAACCATCCTCGA+AGG | - | chr5_4:12318502-12318521 | None:intergenic | 40.0% | |
TAGAATAAACCCACTTGGGT+TGG | + | chr5_4:12318538-12318557 | Msa0838090:intron | 40.0% | |
GCTAAATAGCCCACCTAAAT+TGG | - | chr5_4:12318634-12318653 | None:intergenic | 40.0% | |
TGCGAGTTCAAGTAACAGAT+TGG | + | chr5_4:12318682-12318701 | Msa0838090:intron | 40.0% | |
! | CTGCTTCGTTTTCACAAAAG+TGG | + | chr5_4:12318829-12318848 | Msa0838090:intron | 40.0% |
!!! | TCATTGACTTTTGTGGCAGA+TGG | + | chr5_4:12318865-12318884 | Msa0838090:intron | 40.0% |
ACTTACAGGCCATGAAAATG+TGG | + | chr5_4:12318940-12318959 | Msa0838090:intron | 40.0% | |
! | TCGACAACTCCACAAGTTTT+TGG | + | chr5_4:12319311-12319330 | Msa0838090:intron | 40.0% |
ATCCTGGATCCAAAAACTTG+TGG | - | chr5_4:12319323-12319342 | None:intergenic | 40.0% | |
CGGCATCTTTCTCAGTATAA+CGG | - | chr5_4:12319413-12319432 | None:intergenic | 40.0% | |
GGTCAAGTTCACTGGAATAT+TGG | + | chr5_4:12319517-12319536 | Msa0838090:CDS | 40.0% | |
ATCGGACAAACCAAAATCAG+TGG | - | chr5_4:12319644-12319663 | None:intergenic | 40.0% | |
CGATTTCATAAAACCTGGTG+AGG | + | chr5_4:12319660-12319679 | Msa0838090:intron | 40.0% | |
ATGTTCTTGCAAAACCCACT+TGG | + | chr5_4:12319745-12319764 | Msa0838090:intron | 40.0% | |
TGTTCTTGCAAAACCCACTT+GGG | + | chr5_4:12319746-12319765 | Msa0838090:intron | 40.0% | |
CCACCTAAATTGGCATTAGA+GGG | - | chr5_4:12319836-12319855 | None:intergenic | 40.0% | |
CCTCTAATGCCAATTTAGGT+GGG | + | chr5_4:12319834-12319853 | Msa0838090:intron | 40.0% | |
ACATATTGCTTTGTGGGAGA+CGG | + | chr5_4:12320051-12320070 | Msa0838090:CDS | 40.0% | |
! | TCCTCAGTCTTATCCCAAAA+TGG | - | chr5_4:12320077-12320096 | None:intergenic | 40.0% |
!!! | TTTTGGGATAAGACTGAGGA+TGG | + | chr5_4:12320077-12320096 | Msa0838090:CDS | 40.0% |
TTTGCGATCACATCATATGC+AGG | + | chr5_4:12320262-12320281 | Msa0838090:intron | 40.0% | |
CACATCATATGCAGGTCTTA+CGG | + | chr5_4:12320270-12320289 | Msa0838090:intron | 40.0% | |
AGTGAAAAGGGAAAGAAAGG+AGG | + | chr5_4:12320880-12320899 | Msa0838090:intron | 40.0% | |
GCCAAGTTATTCTTTGTCCT+AGG | - | chr5_4:12320929-12320948 | None:intergenic | 40.0% | |
AATTCAGTTCAAGGCTTTGC+AGG | + | chr5_4:12321566-12321585 | Msa0838090:intron | 40.0% | |
TGGTTACTTGGTTATCTTGC+AGG | + | chr5_4:12321624-12321643 | Msa0838090:intron | 40.0% | |
! | TAGTCTTGAAGAGATGAGAC+AGG | + | chr5_4:12321732-12321751 | Msa0838090:CDS | 40.0% |
GCAGGGAATACTAAATTACG+AGG | - | chr5_4:12321806-12321825 | None:intergenic | 40.0% | |
CTTCACTTTAGACCAAAGCA+GGG | - | chr5_4:12321823-12321842 | None:intergenic | 40.0% | |
TCTTCACTTTAGACCAAAGC+AGG | - | chr5_4:12321824-12321843 | None:intergenic | 40.0% | |
GTTGAAAGAATCCCGTGTAT+TGG | + | chr5_4:12321878-12321897 | Msa0838090:CDS | 40.0% | |
AAGTGCTCGACAAATATGGA+TGG | - | chr5_4:12321945-12321964 | None:intergenic | 40.0% | |
ATGTGCAGATGAGTGATTAG+GGG | - | chr5_4:12322079-12322098 | None:intergenic | 40.0% | |
GAATGTGCAGATGAGTGATT+AGG | - | chr5_4:12322081-12322100 | None:intergenic | 40.0% | |
!! | GTTTCTGTTATTCTGAGGTG+AGG | + | chr5_4:12322407-12322426 | Msa0838090:intron | 40.0% |
!! | TTCTGTTATTCTGAGGTGAG+GGG | + | chr5_4:12322409-12322428 | Msa0838090:intron | 40.0% |
ACACACACATAGAGCTAATG+TGG | - | chr5_4:12322463-12322482 | None:intergenic | 40.0% | |
ACAATTTAAGGGGACCAAAG+TGG | + | chr5_4:12322739-12322758 | Msa0838090:intron | 40.0% | |
AAATGAGCGAATCACCACTT+TGG | - | chr5_4:12322756-12322775 | None:intergenic | 40.0% | |
GAAGCCGATATTGACAAAGA+TGG | + | chr5_4:12322886-12322905 | Msa0838090:CDS | 40.0% | |
AGATCAGCTTACCAGAATTC+AGG | + | chr5_4:12322911-12322930 | Msa0838090:CDS | 40.0% | |
CTAGCTTAGATGTGTTTCAG+AGG | + | chr5_4:12323002-12323021 | Msa0838090:exon | 40.0% | |
! | TGATTCAAACGAGAGAGTGT+TGG | + | chr5_4:12323031-12323050 | Msa0838090:three_prime_UTR | 40.0% |
GCACAGGAGATCATCTTAAA+AGG | - | chr5_4:12323062-12323081 | None:intergenic | 40.0% | |
CTGCAGAGCATATATCACAA+TGG | - | chr5_4:12323099-12323118 | None:intergenic | 40.0% | |
AGTTTCAGAGTTCCATGGAA+TGG | - | chr5_4:12323138-12323157 | None:intergenic | 40.0% | |
TAGAGTGTATAGACCCTGTT+TGG | + | chr5_4:12323240-12323259 | Msa0838090:three_prime_UTR | 40.0% | |
TGTATAGACCCTGTTTGGAT+TGG | + | chr5_4:12323245-12323264 | Msa0838090:three_prime_UTR | 40.0% | |
! | GTTGATTCCGTGGTTGTTGA+CGG | - | chr5_4:12317434-12317453 | None:intergenic | 45.0% |
!! | GGTTCTAGACATGTTCCTTG+TGG | + | chr5_4:12317572-12317591 | Msa0838090:CDS | 45.0% |
CTTGGGAAATTGTTGGGTCA+TGG | + | chr5_4:12317644-12317663 | Msa0838090:CDS | 45.0% | |
! | CGGTCACAACGTACAAGTTT+TGG | - | chr5_4:12318371-12318390 | None:intergenic | 45.0% |
CAACTGATGAACACAATGGC+GGG | - | chr5_4:12318473-12318492 | None:intergenic | 45.0% | |
GCCATTGTGTTCATCAGTTG+TGG | + | chr5_4:12318473-12318492 | Msa0838090:intron | 45.0% | |
GCCACAACTGATGAACACAA+TGG | - | chr5_4:12318477-12318496 | None:intergenic | 45.0% | |
! | ATTCTCTCCGGTGCCAATTT+AGG | + | chr5_4:12318618-12318637 | Msa0838090:intron | 45.0% |
AAGGTGGAGAACTACTAGAC+CGG | + | chr5_4:12319226-12319245 | Msa0838090:CDS | 45.0% | |
!! | CTCCACAAGTTTTTGGATCC+AGG | + | chr5_4:12319318-12319337 | Msa0838090:intron | 45.0% |
!! | GCAGCTCAGTGTCATTTACA+TGG | + | chr5_4:12319462-12319481 | Msa0838090:CDS | 45.0% |
!!! | GCTTTGAAGGCCACTGATTT+TGG | + | chr5_4:12319631-12319650 | Msa0838090:intron | 45.0% |
CGTAAATAGTTTCCCTCACC+AGG | - | chr5_4:12319676-12319695 | None:intergenic | 45.0% | |
CCCTCTAATGCCAATTTAGG+TGG | + | chr5_4:12319833-12319852 | Msa0838090:intron | 45.0% | |
CCCACCTAAATTGGCATTAG+AGG | - | chr5_4:12319837-12319856 | None:intergenic | 45.0% | |
!! | TCGCACCAGAAGTGTTGAAA+CGG | + | chr5_4:12319982-12320001 | Msa0838090:CDS | 45.0% |
GACTTCCGTTTCAACACTTC+TGG | - | chr5_4:12319990-12320009 | None:intergenic | 45.0% | |
!! | GAAGTGTTGAAACGGAAGTC+AGG | + | chr5_4:12319990-12320009 | Msa0838090:CDS | 45.0% |
!!! | GCCATTTTGGGATAAGACTG+AGG | + | chr5_4:12320073-12320092 | Msa0838090:CDS | 45.0% |
GACTGAGGATGGTATCTTCA+AGG | + | chr5_4:12320088-12320107 | Msa0838090:CDS | 45.0% | |
TGAGGATGGTATCTTCAAGG+AGG | + | chr5_4:12320091-12320110 | Msa0838090:CDS | 45.0% | |
TACGGAACAAGCCTGATTTC+CGG | + | chr5_4:12320288-12320307 | Msa0838090:CDS | 45.0% | |
! | GCATTACTTATGGTTGGCCA+TGG | - | chr5_4:12320320-12320339 | None:intergenic | 45.0% |
AGATCCTCGGGCAAGATTAA+CGG | + | chr5_4:12320373-12320392 | Msa0838090:CDS | 45.0% | |
AGCTGCATGTAAGGATGCTT+AGG | - | chr5_4:12321080-12321099 | None:intergenic | 45.0% | |
! | CAAACTGCCGCATGTTGTTT+AGG | - | chr5_4:12321496-12321515 | None:intergenic | 45.0% |
CTTGGTTATCTTGCAGGCAT+TGG | + | chr5_4:12321630-12321649 | Msa0838090:intron | 45.0% | |
TTGGCTAGCACACTTAACGA+AGG | + | chr5_4:12321649-12321668 | Msa0838090:CDS | 45.0% | |
GGGATTCTTTCAACTTCCAC+GGG | - | chr5_4:12321872-12321891 | None:intergenic | 45.0% | |
CGGGATTCTTTCAACTTCCA+CGG | - | chr5_4:12321873-12321892 | None:intergenic | 45.0% | |
AATATGGATGGTGCCTGCAA+AGG | - | chr5_4:12321933-12321952 | None:intergenic | 45.0% | |
CAGATTGACAGCAACACAGA+TGG | + | chr5_4:12322112-12322131 | Msa0838090:intron | 45.0% | |
GGATGGGTATATTACTCCAG+AGG | + | chr5_4:12322255-12322274 | Msa0838090:CDS | 45.0% | |
TACTCCAGAGGAACTCAGAA+TGG | + | chr5_4:12322267-12322286 | Msa0838090:CDS | 45.0% | |
CAAACCATTCTGAGTTCCTC+TGG | - | chr5_4:12322274-12322293 | None:intergenic | 45.0% | |
!! | TCTGTTATTCTGAGGTGAGG+GGG | + | chr5_4:12322410-12322429 | Msa0838090:intron | 45.0% |
ACGGCAATTCACGCTAAGTT+GGG | - | chr5_4:12322508-12322527 | None:intergenic | 45.0% | |
AACGGCAATTCACGCTAAGT+TGG | - | chr5_4:12322509-12322528 | None:intergenic | 45.0% | |
TCCTTCGATGACGTAGAGTT+GGG | - | chr5_4:12322981-12323000 | None:intergenic | 45.0% | |
ATCCTTCGATGACGTAGAGT+TGG | - | chr5_4:12322982-12323001 | None:intergenic | 45.0% | |
GCTTAGATGTGTTTCAGAGG+CGG | + | chr5_4:12323005-12323024 | Msa0838090:exon | 45.0% | |
TGCAATCTCTTGCCATTCCA+TGG | + | chr5_4:12323123-12323142 | Msa0838090:three_prime_UTR | 45.0% | |
AATATGGCGTCGTCTTGCAA+AGG | + | chr5_4:12323170-12323189 | Msa0838090:three_prime_UTR | 45.0% | |
ACCTGAAGCCAATCCAAACA+GGG | - | chr5_4:12323256-12323275 | None:intergenic | 45.0% | |
TACCTGAAGCCAATCCAAAC+AGG | - | chr5_4:12323257-12323276 | None:intergenic | 45.0% | |
!! | TTATAAAAAATATAGATTTA+AGG | + | chr5_4:12322037-12322056 | Msa0838090:intron | 5.0% |
ACGGAATCCGTCAACAACCA+CGG | + | chr5_4:12317424-12317443 | Msa0838090:CDS | 50.0% | |
CACGGAATCAACAGCAACCA+CGG | + | chr5_4:12317442-12317461 | Msa0838090:CDS | 50.0% | |
GTACGTTGTGACCGTACTTG+CGG | + | chr5_4:12318377-12318396 | Msa0838090:intron | 50.0% | |
! | AACACAATGGCGGGAGAAAC+TGG | - | chr5_4:12318464-12318483 | None:intergenic | 50.0% |
ATCAGTTGTGGCATCCTTCG+AGG | + | chr5_4:12318485-12318504 | Msa0838090:intron | 50.0% | |
!! | TTGGCCTGGTGGTATTGACT+TGG | + | chr5_4:12318557-12318576 | Msa0838090:intron | 50.0% |
!! | TGGCCTGGTGGTATTGACTT+GGG | + | chr5_4:12318558-12318577 | Msa0838090:intron | 50.0% |
AGACCCAAGTCAATACCACC+AGG | - | chr5_4:12318564-12318583 | None:intergenic | 50.0% | |
GAATCGAACCTGAGACCTTG+CGG | - | chr5_4:12318602-12318621 | None:intergenic | 50.0% | |
GTCTCAGGTTCGATTCTCTC+CGG | + | chr5_4:12318606-12318625 | Msa0838090:intron | 50.0% | |
! | TCTCCGGTGCCAATTTAGGT+GGG | + | chr5_4:12318622-12318641 | Msa0838090:intron | 50.0% |
TAGCCCACCTAAATTGGCAC+CGG | - | chr5_4:12318628-12318647 | None:intergenic | 50.0% | |
GGTTCTCCCTATAGCAGTTG+AGG | + | chr5_4:12318886-12318905 | Msa0838090:intron | 50.0% | |
CAGCATCTGCCTTACAACCA+CGG | - | chr5_4:12319436-12319455 | None:intergenic | 50.0% | |
GGTTGTAAGGCAGATGCTGA+AGG | + | chr5_4:12319437-12319456 | Msa0838090:CDS | 50.0% | |
AGTGAACTTGACCTCACCTC+TGG | - | chr5_4:12319510-12319529 | None:intergenic | 50.0% | |
AGAGGTGAGGTCAAGTTCAC+TGG | + | chr5_4:12319509-12319528 | Msa0838090:CDS | 50.0% | |
CTTGCAAAACCCACTTGGGT+TGG | + | chr5_4:12319750-12319769 | Msa0838090:intron | 50.0% | |
CAGGCCCTGAATCAGATGTA+TGG | + | chr5_4:12320009-12320028 | Msa0838090:CDS | 50.0% | |
! | TTTGTGGGAGACGGCCATTT+TGG | + | chr5_4:12320060-12320079 | Msa0838090:CDS | 50.0% |
!! | TTGTGGGAGACGGCCATTTT+GGG | + | chr5_4:12320061-12320080 | Msa0838090:CDS | 50.0% |
!! | GCACATCCATGGGTTAGAGA+AGG | + | chr5_4:12321434-12321453 | Msa0838090:intron | 50.0% |
!! | CATCCATGGGTTAGAGAAGG+AGG | + | chr5_4:12321437-12321456 | Msa0838090:CDS | 50.0% |
TCTCCTCCTTCTCTAACCCA+TGG | - | chr5_4:12321443-12321462 | None:intergenic | 50.0% | |
!! | ATGGGTTAGAGAAGGAGGAG+AGG | + | chr5_4:12321442-12321461 | Msa0838090:CDS | 50.0% |
TCAAGGCTTTGCAGGCTAGA+AGG | + | chr5_4:12321574-12321593 | Msa0838090:intron | 50.0% | |
! | CTTTGCAGGCTAGAAGGTGT+TGG | + | chr5_4:12321580-12321599 | Msa0838090:intron | 50.0% |
CTCTTGCTAAAGATCTCCCG+TGG | + | chr5_4:12321853-12321872 | Msa0838090:CDS | 50.0% | |
AGGAACATGACTCCGACAAG+TGG | + | chr5_4:12322188-12322207 | Msa0838090:CDS | 50.0% | |
GGCTTCAACACAATCTGCAC+AGG | - | chr5_4:12323078-12323097 | None:intergenic | 50.0% | |
!! | ACCCTGTTTGGATTGGCTTC+AGG | + | chr5_4:12323252-12323271 | Msa0838090:three_prime_UTR | 50.0% |
!! | CGTGGTTGCTGTTGATTCCG+TGG | - | chr5_4:12317444-12317463 | None:intergenic | 55.0% |
GGAATCAACAGCAACCACGG+CGG | + | chr5_4:12317445-12317464 | Msa0838090:CDS | 55.0% | |
GGCGGCGAAGCAGAAACAAA+CGG | + | chr5_4:12317478-12317497 | Msa0838090:CDS | 55.0% | |
TTATTGTCGCGATGCGGCTG+AGG | + | chr5_4:12318245-12318264 | Msa0838090:intron | 55.0% | |
GTTGTGGCATCCTTCGAGGA+TGG | + | chr5_4:12318489-12318508 | Msa0838090:intron | 55.0% | |
!! | TAAACCCACTTGGGTTGGCC+TGG | + | chr5_4:12318543-12318562 | Msa0838090:intron | 55.0% |
! | CTCTCCGGTGCCAATTTAGG+TGG | + | chr5_4:12318621-12318640 | Msa0838090:intron | 55.0% |
TACTGAGAAAGATGCCGCCG+TGG | + | chr5_4:12319416-12319435 | Msa0838090:CDS | 55.0% | |
AAGATGCCGCCGTGGTTGTA+AGG | + | chr5_4:12319424-12319443 | Msa0838090:CDS | 55.0% | |
CATCTGCCTTACAACCACGG+CGG | - | chr5_4:12319433-12319452 | None:intergenic | 55.0% | |
ACATCGCGACATGAAGCCAG+AGG | + | chr5_4:12319491-12319510 | Msa0838090:CDS | 55.0% | |
!! | AAAACCCACTTGGGTTGGCC+TGG | + | chr5_4:12319755-12319774 | Msa0838090:intron | 55.0% |
!! | TTGGGTTGGCCTGGTGGTAT+TGG | + | chr5_4:12318552-12318571 | Msa0838090:intron | 55.0% |
!! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr5_4:12319769-12319788 | Msa0838090:intron | 55.0% |
!! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr5_4:12319770-12319789 | Msa0838090:intron | 55.0% |
!! | GTGGTATTGGCTTGGGACCT+GGG | + | chr5_4:12319777-12319796 | Msa0838090:intron | 55.0% |
GAATCGAACCTGAGACCTCG+AGG | - | chr5_4:12319814-12319833 | None:intergenic | 55.0% | |
GGAACAAGCCTGATTTCCGG+CGG | + | chr5_4:12320291-12320310 | Msa0838090:CDS | 55.0% | |
CATGGTTTCCGCCGGAAATC+AGG | - | chr5_4:12320302-12320321 | None:intergenic | 55.0% | |
CTGATTTCCGGCGGAAACCA+TGG | + | chr5_4:12320300-12320319 | Msa0838090:CDS | 55.0% | |
GGCAAGATTAACGGCTGCTC+AGG | + | chr5_4:12320382-12320401 | Msa0838090:CDS | 55.0% | |
ACTCCGACAAGTGGCAGCAA+CGG | + | chr5_4:12322197-12322216 | Msa0838090:CDS | 55.0% | |
! | TGACCGTTGCTGCCACTTGT+CGG | - | chr5_4:12322203-12322222 | None:intergenic | 55.0% |
TTCCATCGATCCTCTGCTCG+AGG | + | chr5_4:12322864-12322883 | Msa0838090:CDS | 55.0% | |
TTCCTCGAGCAGAGGATCGA+TGG | - | chr5_4:12322869-12322888 | None:intergenic | 55.0% | |
!! | ATATCGGCTTCCTCGAGCAG+AGG | - | chr5_4:12322877-12322896 | None:intergenic | 55.0% |
GCCCAACTCTACGTCATCGA+AGG | + | chr5_4:12322977-12322996 | Msa0838090:CDS | 55.0% | |
GTGACCGTACTTGCGGTTGC+TGG | + | chr5_4:12318384-12318403 | Msa0838090:intron | 60.0% | |
GTGGCCAGCAACCGCAAGTA+CGG | - | chr5_4:12318391-12318410 | None:intergenic | 60.0% | |
ACCACCAGGCCAACCCAAGT+GGG | - | chr5_4:12318550-12318569 | None:intergenic | 60.0% | |
TACCACCAGGCCAACCCAAG+TGG | - | chr5_4:12318551-12318570 | None:intergenic | 60.0% | |
TGCGAGTATGCTCCTCCGCA+AGG | + | chr5_4:12318584-12318603 | Msa0838090:intron | 60.0% | |
ATGCTCCTCCGCAAGGTCTC+AGG | + | chr5_4:12318591-12318610 | Msa0838090:intron | 60.0% | |
TCGAACCTGAGACCTTGCGG+AGG | - | chr5_4:12318599-12318618 | None:intergenic | 60.0% | |
GCGACATGAAGCCAGAGGTG+AGG | + | chr5_4:12319496-12319515 | Msa0838090:CDS | 60.0% | |
ACCACCAGGCCAACCCAAGT+GGG | - | chr5_4:12318550-12318569 | None:intergenic | 60.0% | |
TACCACCAGGCCAACCCAAG+TGG | - | chr5_4:12318551-12318570 | None:intergenic | 60.0% | |
GGTCCCAAGCCAATACCACC+AGG | - | chr5_4:12319776-12319795 | None:intergenic | 60.0% | |
!! | GGTGGTATTGGCTTGGGACC+TGG | + | chr5_4:12319776-12319795 | Msa0838090:intron | 60.0% |
TCGAACCTGAGACCTCGAGG+AGG | - | chr5_4:12319811-12319830 | None:intergenic | 60.0% | |
! | TGGTTGGCCATGGTTTCCGC+CGG | - | chr5_4:12320310-12320329 | None:intergenic | 60.0% |
GCAGCCGTTAATCTTGCCCG+AGG | - | chr5_4:12320380-12320399 | None:intergenic | 60.0% | |
CAAGTGGCAGCAACGGTCAC+AGG | + | chr5_4:12322204-12322223 | Msa0838090:CDS | 60.0% | |
TTCTGCTTCGCCGCCGCTGT+CGG | - | chr5_4:12317473-12317492 | None:intergenic | 65.0% | |
!! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr5_4:12318546-12318565 | Msa0838090:intron | 65.0% |
!! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr5_4:12318546-12318565 | Msa0838090:intron | 65.0% |
! | TCGAGGAGGAGCACACTCCC+AGG | - | chr5_4:12319797-12319816 | None:intergenic | 65.0% |
! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr5_4:12319796-12319815 | Msa0838090:intron | 65.0% |
GTGCTCCTCCTCGAGGTCTC+AGG | + | chr5_4:12319803-12319822 | Msa0838090:intron | 65.0% | |
!! | AACCACGGCGGCGCCGACAG+CGG | + | chr5_4:12317457-12317476 | Msa0838090:CDS | 75.0% |
!!! | CACGGCGGCGCCGACAGCGG+CGG | + | chr5_4:12317460-12317479 | Msa0838090:CDS | 85.0% |
! | CGCCGCTGTCGGCGCCGCCG+TGG | - | chr5_4:12317462-12317481 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 12317347 | 12323468 | 12317347 | ID=Msa0838090;Name=Msa0838090 |
chr5_4 | mRNA | 12317347 | 12323468 | 12317347 | ID=Msa0838090-mRNA-1;Parent=Msa0838090;Name=Msa0838090-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.77|0.7|1|0.77|0.8|10|463|494 |
chr5_4 | exon | 12317347 | 12317750 | 12317347 | ID=Msa0838090-mRNA-1:exon:5436;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12319218 | 12319259 | 12319218 | ID=Msa0838090-mRNA-1:exon:5437;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12319401 | 12319550 | 12319401 | ID=Msa0838090-mRNA-1:exon:5438;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12319971 | 12320112 | 12319971 | ID=Msa0838090-mRNA-1:exon:5439;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12320284 | 12320410 | 12320284 | ID=Msa0838090-mRNA-1:exon:5440;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12321435 | 12321550 | 12321435 | ID=Msa0838090-mRNA-1:exon:5441;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12321646 | 12321753 | 12321646 | ID=Msa0838090-mRNA-1:exon:5442;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12321852 | 12321914 | 12321852 | ID=Msa0838090-mRNA-1:exon:5443;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12322115 | 12322288 | 12322115 | ID=Msa0838090-mRNA-1:exon:5444;Parent=Msa0838090-mRNA-1 |
chr5_4 | exon | 12322847 | 12323468 | 12322847 | ID=Msa0838090-mRNA-1:exon:5445;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12317347 | 12317750 | 12317347 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12319218 | 12319259 | 12319218 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12319401 | 12319550 | 12319401 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12319971 | 12320112 | 12319971 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12320284 | 12320410 | 12320284 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12321435 | 12321550 | 12321435 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12321646 | 12321753 | 12321646 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12321852 | 12321914 | 12321852 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12322115 | 12322288 | 12322115 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | CDS | 12322847 | 12323005 | 12322847 | ID=Msa0838090-mRNA-1:cds;Parent=Msa0838090-mRNA-1 |
chr5_4 | three_prime_UTR | 12323006 | 12323468 | 12323006 | ID=Msa0838090-mRNA-1:three_prime_utr;Parent=Msa0838090-mRNA-1 |
Gene Sequence |
Protein sequence |