AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0570830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570830 MtrunA17_Chr8g0385691 81.298 262 3 2 1 225 1 253 2.54e-147 410
Msa0570830 MtrunA17_Chr8g0385681 74.806 258 23 2 3 223 2 254 6.83e-132 371
Msa0570830 MtrunA17_Chr3g0131581 60.504 238 56 2 24 224 36 272 5.32e-98 286
Msa0570830 MtrunA17_Chr1g0161441 34.310 239 111 5 27 223 3 237 8.66e-35 124
Msa0570830 MtrunA17_Chr4g0058811 31.452 124 83 2 54 176 69 191 1.58e-14 70.5
Msa0570830 MtrunA17_Chr4g0058791 29.839 124 85 2 54 176 67 189 2.97e-14 69.7
Msa0570830 MtrunA17_Chr3g0115591 27.500 160 111 5 29 186 21 177 1.76e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570830 AT1G01630.1 52.381 231 73 1 31 224 25 255 1.45e-81 244
Msa0570830 AT1G14820.3 32.340 235 116 4 31 223 3 236 8.34e-26 101
Msa0570830 AT1G14820.2 33.796 216 100 4 50 223 9 223 6.57e-25 98.6
Msa0570830 AT1G14820.1 33.796 216 100 4 50 223 9 223 6.57e-25 98.6
Msa0570830 AT5G63060.2 33.333 126 78 3 54 176 35 157 4.61e-13 66.6
Msa0570830 AT5G63060.1 33.333 126 78 3 54 176 70 192 6.02e-13 66.6
Msa0570830 AT4G36640.1 31.159 138 90 4 56 191 41 175 7.62e-12 63.9
Msa0570830 AT4G36640.3 31.159 138 90 4 56 191 41 175 7.62e-12 63.9
Msa0570830 AT1G75170.2 28.777 139 94 4 55 191 43 178 1.30e-11 63.2
Msa0570830 AT1G75170.1 28.777 139 94 4 55 191 43 178 1.30e-11 63.2

Find 73 sgRNAs with CRISPR-Local

Find 635 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCTCACAAGACGGATTT+TGG 0.212306 4_1:+73209641 None:intergenic
CGCAACAGTTCCTTCTCTTT+TGG 0.241016 4_1:-73199047 Msa0570830:three_prime_UTR
CTTGATTTCTAATTTCTTGT+AGG 0.255904 4_1:-73199217 Msa0570830:three_prime_UTR
ATCAACATCAATGGTTAATA+TGG 0.256203 4_1:+73199414 None:intergenic
CGACCAATACTTCTTGTCTT+TGG 0.277733 4_1:-73201170 Msa0570830:CDS
GAGTCCATTAGTAATTTAAT+TGG 0.307515 4_1:-73199105 Msa0570830:three_prime_UTR
TTGTCTTGTGCAATTTGATT+AGG 0.316642 4_1:+73201224 None:intergenic
TAATCAGCACTGGCAAATTA+AGG 0.316967 4_1:-73199576 Msa0570830:three_prime_UTR
ACTTGTTATAATGAGTTTCT+TGG 0.340455 4_1:-73199280 Msa0570830:three_prime_UTR
CTTGTTATAATGAGTTTCTT+GGG 0.347475 4_1:-73199279 Msa0570830:three_prime_UTR
TGAGCCAATTAAATTACTAA+TGG 0.348005 4_1:+73199101 None:intergenic
ATAACGATATACCTGCAAAA+TGG 0.361491 4_1:+73200308 None:intergenic
GACCAATCTTGTCATGTCCT+TGG 0.383685 4_1:+73201192 None:intergenic
AACACAAGATCCATCTTCTA+AGG 0.389643 4_1:-73209610 Msa0570830:intron
CTCCTTGCAGATAGTATTTG+TGG 0.396500 4_1:-73199708 Msa0570830:intron
TGTTCCTCAAGTACTTGAAA+TGG 0.405903 4_1:-73201292 Msa0570830:CDS
AGGAAACTTCACATTAATAT+CGG 0.423756 4_1:-73209798 Msa0570830:five_prime_UTR
AGACATTCATTTGTTCCAAA+TGG 0.425215 4_1:-73201269 Msa0570830:CDS
GATAGAGATATGGAACCATT+TGG 0.426836 4_1:+73201254 None:intergenic
CTACAAGAAATTAGAAATCA+AGG 0.434717 4_1:+73199218 None:intergenic
ACCAATCTTGTCATGTCCTT+GGG 0.434729 4_1:+73201193 None:intergenic
CCAATACTTCTTGTCTTTGG+TGG 0.439235 4_1:-73201167 Msa0570830:CDS
GATTAGTTTAATAGCTATCC+TGG 0.451945 4_1:+73199594 None:intergenic
AACAAGAAGAAGCAAAAGAA+TGG 0.453944 4_1:-73209763 Msa0570830:exon
AGGAACCTGTGATAGAGATA+TGG 0.459166 4_1:+73201244 None:intergenic
AGTCAACTTCCTGAGATATA+CGG 0.465635 4_1:-73199641 Msa0570830:CDS
GCGGTGAAGGGTTGCAAGAA+GGG 0.478500 4_1:-73209735 Msa0570830:CDS
ATTAAATGCTTGTACCAGTT+CGG 0.488112 4_1:+73209889 None:intergenic
CCATTGATGTTGATCAGTCA+TGG 0.513185 4_1:-73199405 Msa0570830:three_prime_UTR
GTTTAATAGCTATCCTGGAT+GGG 0.515671 4_1:+73199599 None:intergenic
AGTTTAATAGCTATCCTGGA+TGG 0.519602 4_1:+73199598 None:intergenic
CTTGTCATGTCCTTGGGCGA+AGG 0.521048 4_1:+73201199 None:intergenic
AGTTTGCCACCGTATATCTC+AGG 0.523881 4_1:+73199632 None:intergenic
CCACCAAAGACAAGAAGTAT+TGG 0.525066 4_1:+73201167 None:intergenic
GCCCAAGGACATGACAAGAT+TGG 0.525216 4_1:-73201194 Msa0570830:CDS
AAGAATGGAAGAAGCGGTGA+AGG 0.530292 4_1:-73209748 Msa0570830:exon
TTAGGTAGTACCTTAGAAGA+TGG 0.534695 4_1:+73209600 None:intergenic
GCTATTAAACTAATCAGCAC+TGG 0.538907 4_1:-73199586 Msa0570830:exon
CCATGACTGATCAACATCAA+TGG 0.546840 4_1:+73199405 None:intergenic
GTCTCCATTTCAAGTACTTG+AGG 0.552376 4_1:+73201288 None:intergenic
AGCGGTGAAGGGTTGCAAGA+AGG 0.555388 4_1:-73209736 Msa0570830:CDS
TGATGTATCAGCATGCCACC+TGG 0.557220 4_1:-73200414 Msa0570830:intron
TTTAATAGCTATCCTGGATG+GGG 0.558711 4_1:+73199600 None:intergenic
ACTGCAATTAGTCCCCATCC+AGG 0.559870 4_1:-73199612 Msa0570830:CDS
TGGTTCCATATCTCTATCAC+AGG 0.560409 4_1:-73201249 Msa0570830:CDS
CAAGACAAGGCCTTCGCCCA+AGG 0.561144 4_1:-73201209 Msa0570830:CDS
CCAACCACCACCAAAAGAGA+AGG 0.567447 4_1:+73199037 None:intergenic
TATAGCAGAACTCAAAGGAT+GGG 0.572999 4_1:-73200373 Msa0570830:CDS
TGGATCTTGTGTTTCAACAA+AGG 0.574409 4_1:+73209620 None:intergenic
TACAAGAAATTAGAAATCAA+GGG 0.581251 4_1:+73199219 None:intergenic
ATCGTATATGTATATACGCA+AGG 0.584996 4_1:+73209851 None:intergenic
ATTATAACAAGTAGCACAGA+AGG 0.590028 4_1:+73199291 None:intergenic
AGTGATTTGCGTGGATACAT+TGG 0.594636 4_1:-73200339 Msa0570830:CDS
GTATAGCAGAACTCAAAGGA+TGG 0.600715 4_1:-73200374 Msa0570830:CDS
GATGTATCAGCATGCCACCT+GGG 0.601615 4_1:-73200413 Msa0570830:intron
CAACAAAGGCTCTCACAAGA+CGG 0.602126 4_1:+73209634 None:intergenic
TAATCAAATTGCACAAGACA+AGG 0.608427 4_1:-73201222 Msa0570830:CDS
TGAGTAAACGAAAATAGTCA+AGG 0.610980 4_1:+73199518 None:intergenic
ATATACATATACGATCGAGC+TGG 0.612892 4_1:-73209843 Msa0570830:five_prime_UTR
TACTCAAATAGTGATTTGCG+TGG 0.616623 4_1:-73200348 Msa0570830:CDS
TCGTGATTTAGATGTAGAGA+AGG 0.617213 4_1:-73201324 Msa0570830:CDS
GTTGGTATAGCAGAACTCAA+AGG 0.623693 4_1:-73200378 Msa0570830:CDS
AAACTTCACATTAATATCGG+TGG 0.625753 4_1:-73209795 Msa0570830:five_prime_UTR
TTCTTGATAAACTATGTGCA+AGG 0.626670 4_1:-73200507 Msa0570830:intron
AAGCAAAAGAATGGAAGAAG+CGG 0.630933 4_1:-73209754 Msa0570830:exon
ATGTATCAGCATGCCACCTG+GGG 0.634138 4_1:-73200412 Msa0570830:intron
CTATTAGACTGATAGTTCAG+TGG 0.634225 4_1:-73199442 Msa0570830:three_prime_UTR
ATAGCAGAACTCAAAGGATG+GGG 0.636851 4_1:-73200372 Msa0570830:CDS
AGAATGGAAGAAGCGGTGAA+GGG 0.656513 4_1:-73209747 Msa0570830:CDS
ATATACCTGCAAAATGGAGA+GGG 0.661917 4_1:+73200314 None:intergenic
GATATACCTGCAAAATGGAG+AGG 0.677136 4_1:+73200313 None:intergenic
CAACTTCCTGAGATATACGG+TGG 0.709613 4_1:-73199638 Msa0570830:CDS
ATGATGTGTGACTGTGAGTG+CGG 0.719666 4_1:-73199176 Msa0570830:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTTATTTAATAAATA+AGG + chr4_1:73202574-73202593 None:intergenic 0.0%
!! ATTATTTATTTAAATAAATA+AGG + chr4_1:73202640-73202659 None:intergenic 0.0%
!! AATAAAAATAATTAAATAAA+AGG - chr4_1:73206041-73206060 Msa0570830:intron 0.0%
!! TATATATATATATATATATA+GGG + chr4_1:73202699-73202718 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr4_1:73202698-73202717 None:intergenic 0.0%
!! ATAAAATAAAAATTCAACAT+CGG + chr4_1:73199585-73199604 None:intergenic 10.0%
!! TTAATCAGTAAAATAATTAA+TGG - chr4_1:73199998-73200017 Msa0570830:intron 10.0%
!!! TATTTTTTTTTTTTAAGCAA+AGG - chr4_1:73200854-73200873 Msa0570830:intron 10.0%
!!! TAAAAAAGTATAATATAATG+TGG + chr4_1:73202262-73202281 None:intergenic 10.0%
!! ACATGTTAAAAAATTTAAAA+TGG + chr4_1:73202991-73203010 None:intergenic 10.0%
!!! TAATATGAAATTTTTAAGTT+GGG + chr4_1:73203122-73203141 None:intergenic 10.0%
!!! TTAATATGAAATTTTTAAGT+TGG + chr4_1:73203123-73203142 None:intergenic 10.0%
!! TAAAATATATAAACAAATCA+AGG + chr4_1:73204936-73204955 None:intergenic 10.0%
!!! TGTTTATATATTTTAATTGA+AGG - chr4_1:73204941-73204960 Msa0570830:intron 10.0%
!! AAAAATAATTAAATAAAAGG+AGG - chr4_1:73206044-73206063 Msa0570830:intron 10.0%
!! AAAATAATTAAATAAAAGGA+GGG - chr4_1:73206045-73206064 Msa0570830:intron 10.0%
!! TATGTTAAAAAAAAAGTAAA+TGG + chr4_1:73208161-73208180 None:intergenic 10.0%
!!! TTACAAATTTTTGTATCATA+TGG - chr4_1:73199370-73199389 Msa0570830:three_prime_UTR 15.0%
!!! AAAATTTATTATTTCTCAGT+TGG + chr4_1:73199496-73199515 None:intergenic 15.0%
!!! ATAAATTTTTCTGATCTTTA+AGG - chr4_1:73199507-73199526 Msa0570830:intron 15.0%
!!! AAGTGATATTTTACATTTTT+AGG - chr4_1:73199615-73199634 Msa0570830:CDS 15.0%
!!! AAATAAATTTTTGTGCTTTT+TGG - chr4_1:73199642-73199661 Msa0570830:CDS 15.0%
!!! AATAAATTTTTGTGCTTTTT+GGG - chr4_1:73199643-73199662 Msa0570830:CDS 15.0%
!! AAAATAAATAATTTGATGAG+AGG + chr4_1:73199903-73199922 None:intergenic 15.0%
!! TAAAATCTAAATTTGAATAG+AGG - chr4_1:73200528-73200547 Msa0570830:intron 15.0%
!! GTTTATCATTAAAATGAATA+AGG + chr4_1:73200679-73200698 None:intergenic 15.0%
!!! TAACAAGAATTACTATTTTT+AGG + chr4_1:73200761-73200780 None:intergenic 15.0%
!!! TTTCATATTTTTTTGTAACT+TGG + chr4_1:73201064-73201083 None:intergenic 15.0%
!!! TTAAAATGGTAAATTTGTTT+TGG + chr4_1:73202977-73202996 None:intergenic 15.0%
!!! TATTGAAAATTAAAAGTGTT+TGG + chr4_1:73204545-73204564 None:intergenic 15.0%
!!! TAGTTTTCATTATAACTTAA+AGG - chr4_1:73205054-73205073 Msa0570830:intron 15.0%
!!! AATTTGTATTTGATTTGAAT+AGG + chr4_1:73205174-73205193 None:intergenic 15.0%
!!! ATCTTGTTATGTTAAAAAAA+GGG + chr4_1:73205219-73205238 None:intergenic 15.0%
!!! AATCTTGTTATGTTAAAAAA+AGG + chr4_1:73205220-73205239 None:intergenic 15.0%
!! AATTTCAGAAAAATAATCTA+AGG + chr4_1:73205702-73205721 None:intergenic 15.0%
!! AGTGATTAGTATTATAAATA+CGG + chr4_1:73205852-73205871 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr4_1:73206579-73206598 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr4_1:73206580-73206599 None:intergenic 15.0%
!! AAGAAAAACGTATAAATAAA+GGG + chr4_1:73206644-73206663 None:intergenic 15.0%
!! TAAGAAAAACGTATAAATAA+AGG + chr4_1:73206645-73206664 None:intergenic 15.0%
!! CTCAAAAGAAATTATTAAAT+AGG + chr4_1:73207032-73207051 None:intergenic 15.0%
!!! CTATTTAATAATTTCTTTTG+AGG - chr4_1:73207030-73207049 Msa0570830:intron 15.0%
!! TTTAATGTTAACTAGATATA+GGG + chr4_1:73207868-73207887 None:intergenic 15.0%
!! ATTTAATGTTAACTAGATAT+AGG + chr4_1:73207869-73207888 None:intergenic 15.0%
!!! TTTTGAGAAAAAGAAAAAAA+TGG + chr4_1:73208917-73208936 None:intergenic 15.0%
!!! AATAAATAAGGGTATAATAA+TGG + chr4_1:73208984-73209003 None:intergenic 15.0%
!! TCAAGTAAAAATAAAAAGAT+AGG - chr4_1:73209446-73209465 Msa0570830:intron 15.0%
!! AATAATACAAGTCCTAAAAA+AGG - chr4_1:73199099-73199118 Msa0570830:three_prime_UTR 20.0%
!!! ATTTTTGTATCATATGGTAA+TGG - chr4_1:73199376-73199395 Msa0570830:three_prime_UTR 20.0%
!!! TGTCAATTTTAGTTTAAGTA+TGG + chr4_1:73199451-73199470 None:intergenic 20.0%
!! AGTATATTTGATGTATTGTT+TGG - chr4_1:73199798-73199817 Msa0570830:intron 20.0%
!! TAAACTCAGTTTAATAATTG+AGG + chr4_1:73199955-73199974 None:intergenic 20.0%
!! TGATATAATAACAACAACAT+AGG - chr4_1:73200058-73200077 Msa0570830:intron 20.0%
!! AAAAACTTTACTAAAAAGTG+TGG + chr4_1:73203052-73203071 None:intergenic 20.0%
!!! AAATTTTTAAGTTGGGAAAA+GGG + chr4_1:73203115-73203134 None:intergenic 20.0%
!!! CAGAGTATTTAAATCATAAA+CGG - chr4_1:73203145-73203164 Msa0570830:intron 20.0%
!! ATATTAATAAATATCCTTCC+AGG - chr4_1:73203201-73203220 Msa0570830:intron 20.0%
!!! TTTTAATGAAGTTGTATAAG+AGG + chr4_1:73204166-73204185 None:intergenic 20.0%
!! TAAAGATAGATGATTTAAAG+AGG + chr4_1:73204393-73204412 None:intergenic 20.0%
!! ACATCAAAAAAATAATTCAC+AGG - chr4_1:73204418-73204437 Msa0570830:intron 20.0%
!! TATATAAACAAATCAAGGAA+AGG + chr4_1:73204931-73204950 None:intergenic 20.0%
!! TTTAATTGCATAATTGGATT+TGG + chr4_1:73205149-73205168 None:intergenic 20.0%
!!! TAGGATTTTAATTGCATAAT+TGG + chr4_1:73205155-73205174 None:intergenic 20.0%
!! TTGTAAGATTATGAGAATTA+GGG + chr4_1:73205603-73205622 None:intergenic 20.0%
!!! AGAAAAATAATCTAAGGTAA+GGG + chr4_1:73205696-73205715 None:intergenic 20.0%
!! AGAAAGAAGAATAAGTTATT+GGG + chr4_1:73205894-73205913 None:intergenic 20.0%
!! TAGAAAGAAGAATAAGTTAT+TGG + chr4_1:73205895-73205914 None:intergenic 20.0%
!! ATTATTAGTGTAAGTAGAAT+TGG + chr4_1:73205927-73205946 None:intergenic 20.0%
!! TTATCGGATAAAAATGAAAA+AGG - chr4_1:73206181-73206200 Msa0570830:intron 20.0%
!! TATCGGATAAAAATGAAAAA+GGG - chr4_1:73206182-73206201 Msa0570830:intron 20.0%
!!! TTTTCTGAAACAATTATATC+TGG - chr4_1:73206444-73206463 Msa0570830:intron 20.0%
!!! TGAAATGACTCAATTATTTT+GGG + chr4_1:73206532-73206551 None:intergenic 20.0%
!!! TTGAAATGACTCAATTATTT+TGG + chr4_1:73206533-73206552 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + chr4_1:73206620-73206639 None:intergenic 20.0%
!! AGAAAAACGTATAAATAAAG+GGG + chr4_1:73206643-73206662 None:intergenic 20.0%
!!! CATATTAAATGTGTTGTTTT+AGG - chr4_1:73206731-73206750 Msa0570830:intron 20.0%
!! TCTTTGTAATTTATTAACTC+TGG + chr4_1:73206804-73206823 None:intergenic 20.0%
!! AAGTATAATAACTTCTACTT+TGG + chr4_1:73207476-73207495 None:intergenic 20.0%
!! GTTATTATACTTAAATTTGC+TGG - chr4_1:73207484-73207503 Msa0570830:intron 20.0%
!!! ATTGGTTAAGAATATGTTTT+TGG - chr4_1:73207919-73207938 Msa0570830:intron 20.0%
!! GATTATGATTGTTAATTTCT+TGG - chr4_1:73208691-73208710 Msa0570830:intron 20.0%
!! ATTATATATATCTCATTGCA+TGG - chr4_1:73208848-73208867 Msa0570830:intron 20.0%
!! AAAAATAATAAATGCTGCAT+TGG + chr4_1:73208959-73208978 None:intergenic 20.0%
!! ATAATTTATGATGTTGTATC+TGG - chr4_1:73209421-73209440 Msa0570830:intron 20.0%
!! TACAAGAAATTAGAAATCAA+GGG + chr4_1:73209701-73209720 None:intergenic 20.0%
!!! AATGTGAAGTTTCCTTTTTT+AGG + chr4_1:73199114-73199133 None:intergenic 25.0%
! AGGAAACTTCACATTAATAT+CGG - chr4_1:73199119-73199138 Msa0570830:three_prime_UTR 25.0%
! AAATTATGTATGAAGAGGTT+AGG + chr4_1:73199338-73199357 None:intergenic 25.0%
! TGACTATACATGTGAAATAT+AGG + chr4_1:73199418-73199437 None:intergenic 25.0%
!!! TTGATGAGAGGATTTTTTTA+AGG + chr4_1:73199891-73199910 None:intergenic 25.0%
! ATTATATCATCATGTGACTT+GGG + chr4_1:73200047-73200066 None:intergenic 25.0%
! TATTATATCATCATGTGACT+TGG + chr4_1:73200048-73200067 None:intergenic 25.0%
! AGATATCAAAGAGAGAAATA+GGG + chr4_1:73200261-73200280 None:intergenic 25.0%
! ATGATTACTTACACTTTGTT+TGG + chr4_1:73200307-73200326 None:intergenic 25.0%
! AAACAATGAATTCATCATAG+AGG + chr4_1:73200415-73200434 None:intergenic 25.0%
! TTGATTAGTGAATATTTGCT+AGG + chr4_1:73201005-73201024 None:intergenic 25.0%
! TAACAATAAGAGAAACAAAC+AGG - chr4_1:73201420-73201439 Msa0570830:intron 25.0%
!!! CTTTGTTTTTTTTAGAGAGA+AGG - chr4_1:73202102-73202121 Msa0570830:intron 25.0%
! CAAGTCACAAACAAATAATT+AGG + chr4_1:73202400-73202419 None:intergenic 25.0%
! AATTATTTGTTTGTGACTTG+TGG - chr4_1:73202400-73202419 Msa0570830:intron 25.0%
!! ATTATTTGTTTGTGACTTGT+GGG - chr4_1:73202401-73202420 Msa0570830:intron 25.0%
!! AAAAGTGTGGTATTAACTTT+AGG + chr4_1:73203039-73203058 None:intergenic 25.0%
!!! AATTTTTAAGTTGGGAAAAG+GGG + chr4_1:73203114-73203133 None:intergenic 25.0%
!!! GAAATTTTTAAGTTGGGAAA+AGG + chr4_1:73203116-73203135 None:intergenic 25.0%
!!! AATTCTGAGATTTTCTGATA+AGG + chr4_1:73203297-73203316 None:intergenic 25.0%
! GATGTTTGATTATGATTTGA+TGG + chr4_1:73203816-73203835 None:intergenic 25.0%
! ATAATCAAACATCATCATCA+AGG - chr4_1:73203823-73203842 Msa0570830:intron 25.0%
!! TGATGACAATTAAGATTTTG+TGG + chr4_1:73204687-73204706 None:intergenic 25.0%
! CAATTTACTATTAGATGCAT+CGG + chr4_1:73205264-73205283 None:intergenic 25.0%
! ATGTTGATGTGTTAAATTTG+TGG + chr4_1:73205382-73205401 None:intergenic 25.0%
! CTTGTAAGATTATGAGAATT+AGG + chr4_1:73205604-73205623 None:intergenic 25.0%
!! CAGAAAAATAATCTAAGGTA+AGG + chr4_1:73205697-73205716 None:intergenic 25.0%
! TATTATAAATACGGAAGCTT+AGG + chr4_1:73205843-73205862 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG + chr4_1:73206621-73206640 None:intergenic 25.0%
!!! TAAATGTGTTGTTTTAGGTT+AGG - chr4_1:73206736-73206755 Msa0570830:intron 25.0%
! TAGTTAGCACCATATTAAAT+AGG - chr4_1:73206850-73206869 Msa0570830:intron 25.0%
! TATATTATACTCCACAATGA+GGG + chr4_1:73206878-73206897 None:intergenic 25.0%
! ATATATTATACTCCACAATG+AGG + chr4_1:73206879-73206898 None:intergenic 25.0%
! CATTGTGGAGTATAATATAT+AGG - chr4_1:73206879-73206898 Msa0570830:intron 25.0%
! AAGTATTACCTTAAAATGAG+TGG - chr4_1:73207082-73207101 Msa0570830:intron 25.0%
! TAATTTAAACACCCAGTTTA+AGG - chr4_1:73207121-73207140 Msa0570830:intron 25.0%
! ATAAAAGACACCTTCATAAA+AGG + chr4_1:73207226-73207245 None:intergenic 25.0%
! GCATTAGTAAATGGTAATAA+GGG - chr4_1:73207506-73207525 Msa0570830:intron 25.0%
! CATTAGTAAATGGTAATAAG+GGG - chr4_1:73207507-73207526 Msa0570830:intron 25.0%
!! TTAATTTCACTATTGGTTAC+AGG - chr4_1:73207533-73207552 Msa0570830:intron 25.0%
! GAATTTGTGCAATAATCATT+TGG - chr4_1:73208065-73208084 Msa0570830:intron 25.0%
! ATCTCTATTTGAGTATTAGA+GGG - chr4_1:73208093-73208112 Msa0570830:intron 25.0%
! ATTATGTACTGTTTAATTCC+TGG - chr4_1:73208271-73208290 Msa0570830:intron 25.0%
!!! AGTTTTATAGTACTGGAATA+AGG + chr4_1:73208445-73208464 None:intergenic 25.0%
!!! ATTTCACAGTTTTATAGTAC+TGG + chr4_1:73208452-73208471 None:intergenic 25.0%
! GTACTATAAAACTGTGAAAT+CGG - chr4_1:73208452-73208471 Msa0570830:intron 25.0%
! CACACTTTCATAAAAATGTA+CGG + chr4_1:73208768-73208787 None:intergenic 25.0%
!!! TTAGTTTTGTTGTCAATGAA+CGG + chr4_1:73208804-73208823 None:intergenic 25.0%
! AAGAAACAATTATTGTGAGA+CGG + chr4_1:73208892-73208911 None:intergenic 25.0%
!!! CTCAAAATAATTGTCACTTT+AGG - chr4_1:73208930-73208949 Msa0570830:intron 25.0%
! GGATGAGATTCAATAAATAA+GGG + chr4_1:73208995-73209014 None:intergenic 25.0%
! TGGATGAGATTCAATAAATA+AGG + chr4_1:73208996-73209015 None:intergenic 25.0%
!!! ATTAGTTGTGTTGATTTTGA+TGG + chr4_1:73209079-73209098 None:intergenic 25.0%
! CTCTAAATAATAGTCGTTTA+AGG + chr4_1:73209127-73209146 None:intergenic 25.0%
! AAACGACTATTATTTAGAGA+CGG - chr4_1:73209128-73209147 Msa0570830:intron 25.0%
! ATCAACATCAATGGTTAATA+TGG + chr4_1:73209506-73209525 None:intergenic 25.0%
!!! ACTTGTTATAATGAGTTTCT+TGG - chr4_1:73209637-73209656 Msa0570830:CDS 25.0%
!! CTTGTTATAATGAGTTTCTT+GGG - chr4_1:73209638-73209657 Msa0570830:CDS 25.0%
! CTACAAGAAATTAGAAATCA+AGG + chr4_1:73209702-73209721 None:intergenic 25.0%
! CTTGATTTCTAATTTCTTGT+AGG - chr4_1:73209700-73209719 Msa0570830:CDS 25.0%
! GAGTCCATTAGTAATTTAAT+TGG - chr4_1:73209812-73209831 Msa0570830:five_prime_UTR 25.0%
! TGAGCCAATTAAATTACTAA+TGG + chr4_1:73209819-73209838 None:intergenic 25.0%
ATCGTATATGTATATACGCA+AGG + chr4_1:73199069-73199088 None:intergenic 30.0%
AAACTTCACATTAATATCGG+TGG - chr4_1:73199122-73199141 Msa0570830:three_prime_UTR 30.0%
AACAAGAAGAAGCAAAAGAA+TGG - chr4_1:73199154-73199173 Msa0570830:three_prime_UTR 30.0%
GACGTAAATTATGTATGAAG+AGG + chr4_1:73199343-73199362 None:intergenic 30.0%
!! TGTATCATATGGTAATGGTT+TGG - chr4_1:73199381-73199400 Msa0570830:three_prime_UTR 30.0%
ATACATGTGAAATATAGGTG+AGG + chr4_1:73199413-73199432 None:intergenic 30.0%
!!! TTTTTTCCACAAGTTCACTA+AGG - chr4_1:73199693-73199712 Msa0570830:CDS 30.0%
! TTTTTCCACAAGTTCACTAA+GGG - chr4_1:73199694-73199713 Msa0570830:CDS 30.0%
GAAAAAAAGAAGAGAGAAAG+AGG - chr4_1:73199735-73199754 Msa0570830:intron 30.0%
TGCACTACATCACAAATTAA+AGG - chr4_1:73200086-73200105 Msa0570830:intron 30.0%
GCACTACATCACAAATTAAA+GGG - chr4_1:73200087-73200106 Msa0570830:intron 30.0%
TCACAAATTAAAGGGTGAAA+AGG - chr4_1:73200095-73200114 Msa0570830:intron 30.0%
! AACTAGCATTTTCTCTTGTT+TGG + chr4_1:73200234-73200253 None:intergenic 30.0%
GATATCAAAGAGAGAAATAG+GGG + chr4_1:73200260-73200279 None:intergenic 30.0%
GAGATATCAAAGAGAGAAAT+AGG + chr4_1:73200262-73200281 None:intergenic 30.0%
TAAAACGAGAAGACAAAGAA+TGG - chr4_1:73200478-73200497 Msa0570830:intron 30.0%
CTAAATTTGAATAGAGGAGA+CGG - chr4_1:73200534-73200553 Msa0570830:intron 30.0%
! TTTTCAACCAAATGACTTTC+AGG + chr4_1:73200562-73200581 None:intergenic 30.0%
! GAAAATTAGCTCTTCAACTT+TGG - chr4_1:73200577-73200596 Msa0570830:intron 30.0%
CATCAGGTTATTGTACTTAA+TGG + chr4_1:73200792-73200811 None:intergenic 30.0%
CATTAAGTACAATAACCTGA+TGG - chr4_1:73200790-73200809 Msa0570830:intron 30.0%
AAAGAAAAAGATACAGAGAC+TGG - chr4_1:73200895-73200914 Msa0570830:intron 30.0%
AAGAAAAAGATACAGAGACT+GGG - chr4_1:73200896-73200915 Msa0570830:intron 30.0%
! AGATTAGAGTTGATTCACTT+TGG + chr4_1:73200980-73200999 None:intergenic 30.0%
! CATAGAACAACTAGAGTTTT+AGG - chr4_1:73201096-73201115 Msa0570830:intron 30.0%
!!! AACAACTAGAGTTTTAGGTA+TGG - chr4_1:73201101-73201120 Msa0570830:intron 30.0%
ATTGTTTCGTTTGTTCGTTA+GGG + chr4_1:73201325-73201344 None:intergenic 30.0%
ATCAAGATGTAGATATCAGA+TGG + chr4_1:73202038-73202057 None:intergenic 30.0%
TCTGATATCTACATCTTGAT+TGG - chr4_1:73202038-73202057 Msa0570830:intron 30.0%
ATATCTACATCTTGATTGGA+AGG - chr4_1:73202042-73202061 Msa0570830:intron 30.0%
ATTGACGATGAAGGAATATT+CGG + chr4_1:73202156-73202175 None:intergenic 30.0%
AGTGTATATATTGACGATGA+AGG + chr4_1:73202165-73202184 None:intergenic 30.0%
! TTATTTGTTTGTGACTTGTG+GGG - chr4_1:73202402-73202421 Msa0570830:intron 30.0%
TCAAATAAACATGTACGTAC+GGG + chr4_1:73202480-73202499 None:intergenic 30.0%
CTCAAATAAACATGTACGTA+CGG + chr4_1:73202481-73202500 None:intergenic 30.0%
ATGTTTATTTGAGTACGTGT+TGG - chr4_1:73202488-73202507 Msa0570830:intron 30.0%
! TACTTTTATGATGTTGAACC+TGG + chr4_1:73203222-73203241 None:intergenic 30.0%
GGTTCAACATCATAAAAGTA+TGG - chr4_1:73203222-73203241 Msa0570830:intron 30.0%
AAAGTTCATAAAGACACGTA+AGG - chr4_1:73203338-73203357 Msa0570830:intron 30.0%
! CAATAATTTTCAGCCAAGTT+TGG - chr4_1:73204808-73204827 Msa0570830:intron 30.0%
GCATACCTATACTATATTGA+AGG - chr4_1:73204833-73204852 Msa0570830:intron 30.0%
GAATGCCTTCAATATAGTAT+AGG + chr4_1:73204841-73204860 None:intergenic 30.0%
! TAATGAGCAATTCGTGTTTT+TGG + chr4_1:73204883-73204902 None:intergenic 30.0%
GAAACACAATTACAGCTAAT+AGG + chr4_1:73204982-73205001 None:intergenic 30.0%
TGAAGAGAAGTGGTATAAAT+AGG + chr4_1:73205012-73205031 None:intergenic 30.0%
TTAGTGAAATTGAAGAGAAG+TGG + chr4_1:73205022-73205041 None:intergenic 30.0%
AAACCGTTGAATTGATGTAA+GGG + chr4_1:73205549-73205568 None:intergenic 30.0%
AAAACCGTTGAATTGATGTA+AGG + chr4_1:73205550-73205569 None:intergenic 30.0%
! TTGAGTGAGAATTGATGATT+AGG + chr4_1:73205579-73205598 None:intergenic 30.0%
AAATTAAAAGCAGCGTTCTT+AGG - chr4_1:73205717-73205736 Msa0570830:intron 30.0%
CACTCTTCCTAAATCTATTT+AGG - chr4_1:73205868-73205887 Msa0570830:intron 30.0%
TATTGGGCCTAAATAGATTT+AGG + chr4_1:73205878-73205897 None:intergenic 30.0%
ATTAGTGTAAGTAGAATTGG+AGG + chr4_1:73205924-73205943 None:intergenic 30.0%
!!! TCATTTTTTGATAGAAGCTG+TGG - chr4_1:73206303-73206322 Msa0570830:intron 30.0%
! GCTTTGATTGATTTAGTGAA+TGG - chr4_1:73206325-73206344 Msa0570830:intron 30.0%
AATGGTAGTACTTTGTAAGT+TGG + chr4_1:73206356-73206375 None:intergenic 30.0%
TGTTTCAGAAAAATACTGAG+CGG + chr4_1:73206436-73206455 None:intergenic 30.0%
!! GGACACTTTTGTTTAGTAAA+TGG + chr4_1:73206511-73206530 None:intergenic 30.0%
ATTACAAAGACCATCTACAA+TGG - chr4_1:73206814-73206833 Msa0570830:intron 30.0%
TGTGGAGTATAATATATAGG+TGG - chr4_1:73206882-73206901 Msa0570830:intron 30.0%
GTATAATATATAGGTGGCTA+TGG - chr4_1:73206888-73206907 Msa0570830:intron 30.0%
ATCCATGAAAAATGAAGAGA+GGG + chr4_1:73206939-73206958 None:intergenic 30.0%
!!! AATAATTTCTTTTGAGGTGC+TGG - chr4_1:73207036-73207055 Msa0570830:intron 30.0%
!!! ATAATTTCTTTTGAGGTGCT+GGG - chr4_1:73207037-73207056 Msa0570830:intron 30.0%
! ATAGAAGACACCTTTTATGA+AGG - chr4_1:73207213-73207232 Msa0570830:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG - chr4_1:73207275-73207294 Msa0570830:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG + chr4_1:73207281-73207300 None:intergenic 30.0%
!! AATTTGCTGGCATTAGTAAA+TGG - chr4_1:73207497-73207516 Msa0570830:intron 30.0%
GGCATTAGTAAATGGTAATA+AGG - chr4_1:73207505-73207524 Msa0570830:intron 30.0%
GGGGAAATTAATTTCACTAT+TGG - chr4_1:73207526-73207545 Msa0570830:intron 30.0%
AGACATTCATTTGTTCCAAA+TGG - chr4_1:73207648-73207667 Msa0570830:intron 30.0%
TTGTCTTGTGCAATTTGATT+AGG + chr4_1:73207696-73207715 None:intergenic 30.0%
TAATCAAATTGCACAAGACA+AGG - chr4_1:73207695-73207714 Msa0570830:intron 30.0%
! TGGAAGACATTTTCAAAAGA+AGG - chr4_1:73207770-73207789 Msa0570830:intron 30.0%
! AGACATTTTCAAAAGAAGGA+TGG - chr4_1:73207774-73207793 Msa0570830:intron 30.0%
TGTTAACTAGATATAGGGAT+AGG + chr4_1:73207863-73207882 None:intergenic 30.0%
!! TGAGAGATTTTAGCCATTTT+GGG + chr4_1:73207967-73207986 None:intergenic 30.0%
GATCTCTATTTGAGTATTAG+AGG - chr4_1:73208092-73208111 Msa0570830:intron 30.0%
! AAAAAGTAAATGGTAGCGAA+GGG + chr4_1:73208151-73208170 None:intergenic 30.0%
! AAAAAAGTAAATGGTAGCGA+AGG + chr4_1:73208152-73208171 None:intergenic 30.0%
!! TGGTATGTAATATTGGTTTG+TGG - chr4_1:73208297-73208316 Msa0570830:intron 30.0%
!! TTGAGAAACTTGTTAATGAG+TGG + chr4_1:73208348-73208367 None:intergenic 30.0%
TTCTTGATAAACTATGTGCA+AGG - chr4_1:73208410-73208429 Msa0570830:intron 30.0%
ATAACGATATACCTGCAAAA+TGG + chr4_1:73208612-73208631 None:intergenic 30.0%
ATTGTTAATTTCTTGGATGC+AGG - chr4_1:73208698-73208717 Msa0570830:intron 30.0%
! CGTACATTTTTATGAAAGTG+TGG - chr4_1:73208766-73208785 Msa0570830:intron 30.0%
!!! TAGTTTTGTTGTCAATGAAC+GGG + chr4_1:73208803-73208822 None:intergenic 30.0%
TGACAACAAAACTAAGAAGA+AGG - chr4_1:73208809-73208828 Msa0570830:intron 30.0%
!! TAGTTTGTTTGAGATGTTGA+TGG - chr4_1:73209160-73209179 Msa0570830:intron 30.0%
!! GATTAGTTTAATAGCTATCC+TGG + chr4_1:73209326-73209345 None:intergenic 30.0%
TGAGTAAACGAAAATAGTCA+AGG + chr4_1:73209402-73209421 None:intergenic 30.0%
ATTATAACAAGTAGCACAGA+AGG + chr4_1:73209629-73209648 None:intergenic 30.0%
ATATACATATACGATCGAGC+TGG - chr4_1:73199074-73199093 Msa0570830:three_prime_UTR 35.0%
AAGCAAAAGAATGGAAGAAG+CGG - chr4_1:73199163-73199182 Msa0570830:three_prime_UTR 35.0%
TGGATCTTGTGTTTCAACAA+AGG + chr4_1:73199300-73199319 None:intergenic 35.0%
AACACAAGATCCATCTTCTA+AGG - chr4_1:73199307-73199326 Msa0570830:three_prime_UTR 35.0%
TTAGGTAGTACCTTAGAAGA+TGG + chr4_1:73199320-73199339 None:intergenic 35.0%
TATTTCTCAGTTGGACAACT+AGG + chr4_1:73199487-73199506 None:intergenic 35.0%
TGGAGAGAAGAAAAAACATG+TGG - chr4_1:73200165-73200184 Msa0570830:intron 35.0%
GGAGAGAAGAAAAAACATGT+GGG - chr4_1:73200166-73200185 Msa0570830:intron 35.0%
! AAGAGAGACAAATCTGAGAT+GGG + chr4_1:73200193-73200212 None:intergenic 35.0%
TGTCACGGTTGATTATTTGT+CGG + chr4_1:73200377-73200396 None:intergenic 35.0%
ATTGAAAAACACGACTGTCA+CGG + chr4_1:73200392-73200411 None:intergenic 35.0%
!!! CTCTTTTATTTGTTGTGCGT+CGG + chr4_1:73200619-73200638 None:intergenic 35.0%
!! AACCTGATGGCTCTAAAAAA+AGG - chr4_1:73200803-73200822 Msa0570830:intron 35.0%
!!! TACCTTTTTTTAGAGCCATC+AGG + chr4_1:73200808-73200827 None:intergenic 35.0%
AGAAAAAGATACAGAGACTG+GGG - chr4_1:73200897-73200916 Msa0570830:intron 35.0%
ATAACGATGTATTCCCGTTA+GGG + chr4_1:73200949-73200968 None:intergenic 35.0%
TATAACGATGTATTCCCGTT+AGG + chr4_1:73200950-73200969 None:intergenic 35.0%
!! TTTATGCTTGCTGTTCATCA+GGG + chr4_1:73201176-73201195 None:intergenic 35.0%
!!! TTTTATGCTTGCTGTTCATC+AGG + chr4_1:73201177-73201196 None:intergenic 35.0%
GATTGTTTCGTTTGTTCGTT+AGG + chr4_1:73201326-73201345 None:intergenic 35.0%
! TTTTGTTGCAGATCAAAGAC+TGG + chr4_1:73201377-73201396 None:intergenic 35.0%
!!! TTTTTGTGCACGTTTTGGTT+TGG + chr4_1:73201825-73201844 None:intergenic 35.0%
TTCAGATTCGATTCTAAGTC+TGG + chr4_1:73201913-73201932 None:intergenic 35.0%
ACTTAGAATCGAATCTGAAG+AGG - chr4_1:73201914-73201933 Msa0570830:intron 35.0%
CTTAGAATCGAATCTGAAGA+GGG - chr4_1:73201915-73201934 Msa0570830:intron 35.0%
AAGATGTAGATATCAGATGG+TGG + chr4_1:73202035-73202054 None:intergenic 35.0%
TACATCTTGATTGGAAGGTT+TGG - chr4_1:73202047-73202066 Msa0570830:intron 35.0%
TTGATTGGAAGGTTTGGATT+GGG - chr4_1:73202053-73202072 Msa0570830:intron 35.0%
CAAATAAACATGTACGTACG+GGG + chr4_1:73202479-73202498 None:intergenic 35.0%
TTTATGATGTTGAACCTGGA+AGG + chr4_1:73203218-73203237 None:intergenic 35.0%
! AAAAGTATGGAAATACGCAG+CGG - chr4_1:73203235-73203254 Msa0570830:intron 35.0%
GTTCAACATGAACAAAGTCT+TGG - chr4_1:73203263-73203282 Msa0570830:intron 35.0%
AGACAACTTCATTATGCATG+TGG - chr4_1:73203941-73203960 Msa0570830:intron 35.0%
! TTAAGTTCACGTTTGAGACA+TGG - chr4_1:73204759-73204778 Msa0570830:intron 35.0%
AGTAAGAAAATCAATTCCCG+AGG + chr4_1:73204785-73204804 None:intergenic 35.0%
TATAGGTATGCTTCCAAACT+TGG + chr4_1:73204824-73204843 None:intergenic 35.0%
!!! TCGTGTTTTTGGAAGGTTTA+AGG + chr4_1:73204872-73204891 None:intergenic 35.0%
! TTTCCCGGTTTTCCATTAAT+CGG - chr4_1:73205102-73205121 Msa0570830:intron 35.0%
TGGTTATGTTGTGTTCCTTA+CGG + chr4_1:73205362-73205381 None:intergenic 35.0%
ATGAACATATGGGTAGTGAA+GGG + chr4_1:73205500-73205519 None:intergenic 35.0%
TATGAACATATGGGTAGTGA+AGG + chr4_1:73205501-73205520 None:intergenic 35.0%
TGAGGGTTGTATGAACATAT+GGG + chr4_1:73205510-73205529 None:intergenic 35.0%
AACCGTTGAATTGATGTAAG+GGG + chr4_1:73205548-73205567 None:intergenic 35.0%
! GATTGCATCTAACGTGTTTT+AGG + chr4_1:73205633-73205652 None:intergenic 35.0%
!!! GGCGTCAGTATTTTATTTTG+TGG + chr4_1:73205980-73205999 None:intergenic 35.0%
ATGCTGATATGTACTGTACT+TGG - chr4_1:73206213-73206232 Msa0570830:intron 35.0%
TGCTGATATGTACTGTACTT+GGG - chr4_1:73206214-73206233 Msa0570830:intron 35.0%
! TTGTAGTAGTTGTTGCCTTT+TGG - chr4_1:73206263-73206282 Msa0570830:intron 35.0%
CGTATAAATAAAGGGGAAAG+TGG + chr4_1:73206636-73206655 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - chr4_1:73206665-73206684 Msa0570830:intron 35.0%
!! ATGAGGGTGCCTATTTAATA+TGG + chr4_1:73206862-73206881 None:intergenic 35.0%
ATGAAAAATGAAGAGAGGGA+GGG + chr4_1:73206935-73206954 None:intergenic 35.0%
GATCCATGAAAAATGAAGAG+AGG + chr4_1:73206940-73206959 None:intergenic 35.0%
AAAGTGAAAATCACACCTTG+AGG - chr4_1:73207323-73207342 Msa0570830:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG + chr4_1:73207341-73207360 None:intergenic 35.0%
TTGATAAAAGACACCACCAA+AGG - chr4_1:73207352-73207371 Msa0570830:intron 35.0%
TGATAAAAGACACCACCAAA+GGG - chr4_1:73207353-73207372 Msa0570830:intron 35.0%
TCGTGATTTAGATGTAGAGA+AGG - chr4_1:73207593-73207612 Msa0570830:intron 35.0%
TGTTCCTCAAGTACTTGAAA+TGG - chr4_1:73207625-73207644 Msa0570830:intron 35.0%
GATAGAGATATGGAACCATT+TGG + chr4_1:73207666-73207685 None:intergenic 35.0%
!! AGAGATTTTAGCCATTTTGG+GGG + chr4_1:73207965-73207984 None:intergenic 35.0%
!! GAGAGATTTTAGCCATTTTG+GGG + chr4_1:73207966-73207985 None:intergenic 35.0%
!! CTGAGAGATTTTAGCCATTT+TGG + chr4_1:73207968-73207987 None:intergenic 35.0%
! TTAGAGGGTTAGTATACCAT+TGG - chr4_1:73208108-73208127 Msa0570830:intron 35.0%
TCATAATCCTTCGTTTCGAT+CGG + chr4_1:73208216-73208235 None:intergenic 35.0%
! AGCAATTTTCGTTGTGATAC+AGG - chr4_1:73208373-73208392 Msa0570830:intron 35.0%
! GCAATTTTCGTTGTGATACA+GGG - chr4_1:73208374-73208393 Msa0570830:intron 35.0%
TATAGCAGAACTCAAAGGAT+GGG - chr4_1:73208544-73208563 Msa0570830:intron 35.0%
! TACTCAAATAGTGATTTGCG+TGG - chr4_1:73208569-73208588 Msa0570830:intron 35.0%
ATATACCTGCAAAATGGAGA+GGG + chr4_1:73208606-73208625 None:intergenic 35.0%
TGTGTGAATTGTGAAGTAGT+TGG - chr4_1:73208645-73208664 Msa0570830:intron 35.0%
AAGCTTCATATATAGCACTC+AGG - chr4_1:73208668-73208687 Msa0570830:intron 35.0%
AGCTTCATATATAGCACTCA+GGG - chr4_1:73208669-73208688 Msa0570830:intron 35.0%
GATTACTACCCTGAAAGATT+GGG - chr4_1:73208720-73208739 Msa0570830:intron 35.0%
ATTACTACCCTGAAAGATTG+GGG - chr4_1:73208721-73208740 Msa0570830:intron 35.0%
TCATAAAAATGTACGGTGCA+TGG + chr4_1:73208761-73208780 None:intergenic 35.0%
AACAATTATTGTGAGACGGA+GGG + chr4_1:73208888-73208907 None:intergenic 35.0%
AAACAATTATTGTGAGACGG+AGG + chr4_1:73208889-73208908 None:intergenic 35.0%
! AGTCGTTTAAGGTTTATGCA+CGG + chr4_1:73209116-73209135 None:intergenic 35.0%
GACTATTATTTAGAGACGGA+GGG - chr4_1:73209132-73209151 Msa0570830:intron 35.0%
TTCCACAAATACTATCTGCA+AGG + chr4_1:73209214-73209233 None:intergenic 35.0%
AGTCAACTTCCTGAGATATA+CGG - chr4_1:73209276-73209295 Msa0570830:intron 35.0%
TTTAATAGCTATCCTGGATG+GGG + chr4_1:73209320-73209339 None:intergenic 35.0%
GTTTAATAGCTATCCTGGAT+GGG + chr4_1:73209321-73209340 None:intergenic 35.0%
AGTTTAATAGCTATCCTGGA+TGG + chr4_1:73209322-73209341 None:intergenic 35.0%
GCTATTAAACTAATCAGCAC+TGG - chr4_1:73209331-73209350 Msa0570830:intron 35.0%
!! TAATCAGCACTGGCAAATTA+AGG - chr4_1:73209341-73209360 Msa0570830:intron 35.0%
CTATTAGACTGATAGTTCAG+TGG - chr4_1:73209475-73209494 Msa0570830:intron 35.0%
! GCGATTTTCTCACAACTTAT+TGG + chr4_1:73209783-73209802 None:intergenic 35.0%
AAAGAGGTGAGAGAGAGTAA+GGG - chr4_1:73199751-73199770 Msa0570830:intron 40.0%
!! CTAGACTTTCTCTGCTGTTT+TGG - chr4_1:73200145-73200164 Msa0570830:intron 40.0%
! AGAGAGACAAATCTGAGATG+GGG + chr4_1:73200192-73200211 None:intergenic 40.0%
GAAGAGAGACAAATCTGAGA+TGG + chr4_1:73200194-73200213 None:intergenic 40.0%
CGACGCACAACAAATAAAAG+AGG - chr4_1:73200617-73200636 Msa0570830:intron 40.0%
GAAAAAGATACAGAGACTGG+GGG - chr4_1:73200898-73200917 Msa0570830:intron 40.0%
AAAAAGATACAGAGACTGGG+GGG - chr4_1:73200899-73200918 Msa0570830:intron 40.0%
!!! AGAGTTTTAGGTATGGCGAA+TGG - chr4_1:73201108-73201127 Msa0570830:intron 40.0%
!! GTGATTCTAAAACCCGCAAA+GGG + chr4_1:73201294-73201313 None:intergenic 40.0%
!! TGTGATTCTAAAACCCGCAA+AGG + chr4_1:73201295-73201314 None:intergenic 40.0%
CGAAACAATCCACTGCAAAA+AGG - chr4_1:73201336-73201355 Msa0570830:CDS 40.0%
! TTAGAACTCGGTTTTTGCTC+TGG + chr4_1:73201880-73201899 None:intergenic 40.0%
!! CAAAAACCGAGTTCTAAACC+AGG - chr4_1:73201883-73201902 Msa0570830:intron 40.0%
!! GGTTTTCCTGGTTTAGAACT+CGG + chr4_1:73201892-73201911 None:intergenic 40.0%
!!! GATTCTAAGTCTGGTTTTCC+TGG + chr4_1:73201904-73201923 None:intergenic 40.0%
! ATGTAGATATCAGATGGTGG+TGG + chr4_1:73202032-73202051 None:intergenic 40.0%
CTTGATTGGAAGGTTTGGAT+TGG - chr4_1:73202052-73202071 Msa0570830:intron 40.0%
TGATTGGAAGGTTTGGATTG+GGG - chr4_1:73202054-73202073 Msa0570830:intron 40.0%
! ACTTGTGGGGACATTTTACT+TGG - chr4_1:73202415-73202434 Msa0570830:intron 40.0%
CTCTGATACATAACGAGATG+GGG + chr4_1:73203382-73203401 None:intergenic 40.0%
GCTCTGATACATAACGAGAT+GGG + chr4_1:73203383-73203402 None:intergenic 40.0%
TGCTCTGATACATAACGAGA+TGG + chr4_1:73203384-73203403 None:intergenic 40.0%
!! AGATTAGAAGTGTTCGTGAG+AGG + chr4_1:73203427-73203446 None:intergenic 40.0%
TATTACCTGCACATTACCCA+CGG - chr4_1:73203448-73203467 Msa0570830:intron 40.0%
GAGACAACATATACGCAGAA+GGG - chr4_1:73203473-73203492 Msa0570830:intron 40.0%
AGACAACATATACGCAGAAG+GGG - chr4_1:73203474-73203493 Msa0570830:intron 40.0%
AAATATGACCTTAGCGATGG+GGG + chr4_1:73203985-73204004 None:intergenic 40.0%
CAAATATGACCTTAGCGATG+GGG + chr4_1:73203986-73204005 None:intergenic 40.0%
CCAAATATGACCTTAGCGAT+GGG + chr4_1:73203987-73204006 None:intergenic 40.0%
TCCAAATATGACCTTAGCGA+TGG + chr4_1:73203988-73204007 None:intergenic 40.0%
TAAGGTCATATTTGGACCGT+CGG - chr4_1:73203992-73204011 Msa0570830:intron 40.0%
TAAGGTCATAAGAACCTGTC+AGG - chr4_1:73204033-73204052 Msa0570830:intron 40.0%
TCCTTTATGACCTTAGCGAT+GGG + chr4_1:73204068-73204087 None:intergenic 40.0%
TCGCAACTCTAAATGCAACT+TGG - chr4_1:73204127-73204146 Msa0570830:intron 40.0%
TGTCTTGAAGTTGCATGAGT+CGG + chr4_1:73204220-73204239 None:intergenic 40.0%
!!! GAGCAATTCGTGTTTTTGGA+AGG + chr4_1:73204879-73204898 None:intergenic 40.0%
GCAACGTAATTTCTCTTTCC+CGG - chr4_1:73205087-73205106 Msa0570830:intron 40.0%
GGTGATAAGAAGCTAAGTAG+TGG + chr4_1:73205128-73205147 None:intergenic 40.0%
GTGAGGGTTGTATGAACATA+TGG + chr4_1:73205511-73205530 None:intergenic 40.0%
!!! GGGAGTTTTATTCATCGTGA+GGG + chr4_1:73205527-73205546 None:intergenic 40.0%
TCCCCCTTACATCAATTCAA+CGG - chr4_1:73205543-73205562 Msa0570830:intron 40.0%
ACCGTTGAATTGATGTAAGG+GGG + chr4_1:73205547-73205566 None:intergenic 40.0%
! TTTCTGTTAGAGCGCTTGTT+GGG + chr4_1:73205808-73205827 None:intergenic 40.0%
!! TTTTCTGTTAGAGCGCTTGT+TGG + chr4_1:73205809-73205828 None:intergenic 40.0%
GATATGTACTGTACTTGGGT+TGG - chr4_1:73206218-73206237 Msa0570830:intron 40.0%
!!! CTTGGGTTGGTTTTGCTTAT+TGG - chr4_1:73206231-73206250 Msa0570830:intron 40.0%
AATTCAAAGCCACAGCCAAA+AGG + chr4_1:73206281-73206300 None:intergenic 40.0%
GTCAGATAGCAGCTTCATAA+TGG + chr4_1:73206374-73206393 None:intergenic 40.0%
ATGGATCAGATATTCCGAGA+CGG + chr4_1:73206492-73206511 None:intergenic 40.0%
TGTGAAAAACCAAACTGGCT+CGG - chr4_1:73206670-73206689 Msa0570830:intron 40.0%
ACAAAGACCATCTACAATGG+TGG - chr4_1:73206817-73206836 Msa0570830:intron 40.0%
CAAAGACCATCTACAATGGT+GGG - chr4_1:73206818-73206837 Msa0570830:intron 40.0%
TTAAATAGGCACCCTCATTG+TGG - chr4_1:73206864-73206883 Msa0570830:intron 40.0%
TATATAGGTGGCTATGGAGA+AGG - chr4_1:73206894-73206913 Msa0570830:intron 40.0%
ATATAGGTGGCTATGGAGAA+GGG - chr4_1:73206895-73206914 Msa0570830:intron 40.0%
CATGAAAAATGAAGAGAGGG+AGG + chr4_1:73206936-73206955 None:intergenic 40.0%
!! CTCCCTCTCTTCATTTTTCA+TGG - chr4_1:73206934-73206953 Msa0570830:intron 40.0%
! TGTCTGCACCACTCATTTTA+AGG + chr4_1:73207093-73207112 None:intergenic 40.0%
! ACAACAGAGCACCTTAAACT+GGG + chr4_1:73207135-73207154 None:intergenic 40.0%
! TACAACAGAGCACCTTAAAC+TGG + chr4_1:73207136-73207155 None:intergenic 40.0%
! TTAAGGTGCTCTGTTGTAGA+TGG - chr4_1:73207138-73207157 Msa0570830:intron 40.0%
TTATGTTACAAGCCACCCTT+TGG + chr4_1:73207371-73207390 None:intergenic 40.0%
! GTCTCCATTTCAAGTACTTG+AGG + chr4_1:73207632-73207651 None:intergenic 40.0%
TGGTTCCATATCTCTATCAC+AGG - chr4_1:73207668-73207687 Msa0570830:intron 40.0%
AGGAACCTGTGATAGAGATA+TGG + chr4_1:73207676-73207695 None:intergenic 40.0%
ACCAATCTTGTCATGTCCTT+GGG + chr4_1:73207727-73207746 None:intergenic 40.0%
CGACCAATACTTCTTGTCTT+TGG - chr4_1:73207747-73207766 Msa0570830:intron 40.0%
! CCACCAAAGACAAGAAGTAT+TGG + chr4_1:73207753-73207772 None:intergenic 40.0%
CCAATACTTCTTGTCTTTGG+TGG - chr4_1:73207750-73207769 Msa0570830:intron 40.0%
CCAATTGTGCTAACTTCTGT+TGG + chr4_1:73207904-73207923 None:intergenic 40.0%
CCAACAGAAGTTAGCACAAT+TGG - chr4_1:73207901-73207920 Msa0570830:intron 40.0%
! AACTAGTCTCCTAATGCCAA+GGG + chr4_1:73208010-73208029 None:intergenic 40.0%
TACTGTTTAATTCCTGGTGC+TGG - chr4_1:73208277-73208296 Msa0570830:intron 40.0%
CAATATTACATACCAGCACC+AGG + chr4_1:73208292-73208311 None:intergenic 40.0%
!! CTGGTGCTGGTATGTAATAT+TGG - chr4_1:73208290-73208309 Msa0570830:intron 40.0%
! ACAAATTTTTCTTCCCCAGG+TGG + chr4_1:73208521-73208540 None:intergenic 40.0%
! CCAACAAATTTTTCTTCCCC+AGG + chr4_1:73208524-73208543 None:intergenic 40.0%
CCTGGGGAAGAAAAATTTGT+TGG - chr4_1:73208521-73208540 Msa0570830:intron 40.0%
GTTGGTATAGCAGAACTCAA+AGG - chr4_1:73208539-73208558 Msa0570830:intron 40.0%
GTATAGCAGAACTCAAAGGA+TGG - chr4_1:73208543-73208562 Msa0570830:intron 40.0%
ATAGCAGAACTCAAAGGATG+GGG - chr4_1:73208545-73208564 Msa0570830:intron 40.0%
! AGTGATTTGCGTGGATACAT+TGG - chr4_1:73208578-73208597 Msa0570830:intron 40.0%
GATATACCTGCAAAATGGAG+AGG + chr4_1:73208607-73208626 None:intergenic 40.0%
GGATTACTACCCTGAAAGAT+TGG - chr4_1:73208719-73208738 Msa0570830:intron 40.0%
ACAACTTCCCCAATCTTTCA+GGG + chr4_1:73208731-73208750 None:intergenic 40.0%
AACAACTTCCCCAATCTTTC+AGG + chr4_1:73208732-73208751 None:intergenic 40.0%
CGACTATTATTTAGAGACGG+AGG - chr4_1:73209131-73209150 Msa0570830:intron 40.0%
CTCCTTGCAGATAGTATTTG+TGG - chr4_1:73209209-73209228 Msa0570830:intron 40.0%
CCATGACTGATCAACATCAA+TGG + chr4_1:73209515-73209534 None:intergenic 40.0%
CCATTGATGTTGATCAGTCA+TGG - chr4_1:73209512-73209531 Msa0570830:intron 40.0%
! CTAAGCAATTTTCTCGCAAC+TGG + chr4_1:73209849-73209868 None:intergenic 40.0%
! AACAGTTCCTTCTCTTTTGG+TGG - chr4_1:73209873-73209892 Msa0570830:five_prime_UTR 40.0%
AAGAATGGAAGAAGCGGTGA+AGG - chr4_1:73199169-73199188 Msa0570830:three_prime_UTR 45.0%
AGAATGGAAGAAGCGGTGAA+GGG - chr4_1:73199170-73199189 Msa0570830:three_prime_UTR 45.0%
CAACAAAGGCTCTCACAAGA+CGG + chr4_1:73199286-73199305 None:intergenic 45.0%
! AAGTTCACTAAGGGTGCGTT+TGG - chr4_1:73199703-73199722 Msa0570830:intron 45.0%
GAAAGAGGTGAGAGAGAGTA+AGG - chr4_1:73199750-73199769 Msa0570830:intron 45.0%
GAGTAAGGGAAGAGAGAAAG+AGG - chr4_1:73199765-73199784 Msa0570830:intron 45.0%
GACGGTTCCTGAAAGTCATT+TGG - chr4_1:73200552-73200571 Msa0570830:intron 45.0%
AAAAGATACAGAGACTGGGG+GGG - chr4_1:73200900-73200919 Msa0570830:intron 45.0%
TGACCCAGGAATAACCCTAA+CGG - chr4_1:73200932-73200951 Msa0570830:intron 45.0%
TTCCCGTTAGGGTTATTCCT+GGG + chr4_1:73200938-73200957 None:intergenic 45.0%
ATTCCCGTTAGGGTTATTCC+TGG + chr4_1:73200939-73200958 None:intergenic 45.0%
! CTTGGATTTTGCTACCGTGT+TGG + chr4_1:73201142-73201161 None:intergenic 45.0%
TAAACGAACCAGACCCTTTG+CGG - chr4_1:73201278-73201297 Msa0570830:CDS 45.0%
TTCGTTTGTTCGTTAGGGAC+TGG + chr4_1:73201320-73201339 None:intergenic 45.0%
! CGTATCTGACCTTTTTGCAG+TGG + chr4_1:73201348-73201367 None:intergenic 45.0%
TGTTGCAGATCAAAGACTGG+TGG + chr4_1:73201374-73201393 None:intergenic 45.0%
ATTTGCAGACTTCATGGCTG+TGG + chr4_1:73201498-73201517 None:intergenic 45.0%
GCTGAGATTTGCAGACTTCA+TGG + chr4_1:73201504-73201523 None:intergenic 45.0%
! TGGTGTCTGTGTGTTGTTGT+TGG + chr4_1:73201675-73201694 None:intergenic 45.0%
! GATTGGTTGTTCCTTTGGGT+TGG + chr4_1:73201713-73201732 None:intergenic 45.0%
!! GTCGGATTGGTTGTTCCTTT+GGG + chr4_1:73201717-73201736 None:intergenic 45.0%
!! AGTCGGATTGGTTGTTCCTT+TGG + chr4_1:73201718-73201737 None:intergenic 45.0%
! CTGGGTTTTTGTGCACGTTT+TGG + chr4_1:73201830-73201849 None:intergenic 45.0%
CAAAACGTGCACAAAAACCC+AGG - chr4_1:73201828-73201847 Msa0570830:intron 45.0%
TCTGTTCTTCCTTTGGTCCT+GGG + chr4_1:73201848-73201867 None:intergenic 45.0%
TGGCTTCTCTGTTCTTCCTT+TGG + chr4_1:73201855-73201874 None:intergenic 45.0%
!! ACTCGGTTTTTGCTCTGGAT+TGG + chr4_1:73201875-73201894 None:intergenic 45.0%
ATAAACATGTACGTACGGGG+TGG + chr4_1:73202476-73202495 None:intergenic 45.0%
TGAACAAAGTCTTGGCACAC+AGG - chr4_1:73203271-73203290 Msa0570830:intron 45.0%
GTATATGTTGTCTCGACCGT+GGG + chr4_1:73203467-73203486 None:intergenic 45.0%
CGAGACAACATATACGCAGA+AGG - chr4_1:73203472-73203491 Msa0570830:intron 45.0%
ATTATGCATGTGGTACCACC+AGG - chr4_1:73203951-73203970 Msa0570830:intron 45.0%
TTATGCATGTGGTACCACCA+GGG - chr4_1:73203952-73203971 Msa0570830:intron 45.0%
CCCATCGCTAAGGTCATATT+TGG - chr4_1:73203984-73204003 Msa0570830:intron 45.0%
AAGGTCATATTTGGACCGTC+GGG - chr4_1:73203993-73204012 Msa0570830:intron 45.0%
CTTTATGACCTTAGCGATGG+GGG + chr4_1:73204066-73204085 None:intergenic 45.0%
CCTTTATGACCTTAGCGATG+GGG + chr4_1:73204067-73204086 None:intergenic 45.0%
GTCCTTTATGACCTTAGCGA+TGG + chr4_1:73204069-73204088 None:intergenic 45.0%
AAGGTCATAAAGGACCTGTC+AGG - chr4_1:73204074-73204093 Msa0570830:intron 45.0%
ATGTTGCATAGTCAGCGATG+GGG + chr4_1:73204108-73204127 None:intergenic 45.0%
GATGTTGCATAGTCAGCGAT+GGG + chr4_1:73204109-73204128 None:intergenic 45.0%
AACAGCAGTAAACAGCAGCA+AGG - chr4_1:73204249-73204268 Msa0570830:intron 45.0%
TGGCCGATTAATGGAAAACC+GGG + chr4_1:73205108-73205127 None:intergenic 45.0%
GTGGCCGATTAATGGAAAAC+CGG + chr4_1:73205109-73205128 None:intergenic 45.0%
GCTAAGTAGTGGCCGATTAA+TGG + chr4_1:73205117-73205136 None:intergenic 45.0%
CAAGAACACAAACAGCCGTA+AGG - chr4_1:73205344-73205363 Msa0570830:intron 45.0%
!!! GGGGAGTTTTATTCATCGTG+AGG + chr4_1:73205528-73205547 None:intergenic 45.0%
GAACTCAGAGAGAGAACCTT+AGG + chr4_1:73205766-73205785 None:intergenic 45.0%
TTGGGAGAAAGAGGAGAAAG+AGG + chr4_1:73205790-73205809 None:intergenic 45.0%
!! TAGTTGTTGCCTTTTGGCTG+TGG - chr4_1:73206269-73206288 Msa0570830:intron 45.0%
TATTGATACTCCCTCCGTCT+CGG - chr4_1:73206475-73206494 Msa0570830:intron 45.0%
ATCAGATATTCCGAGACGGA+GGG + chr4_1:73206488-73206507 None:intergenic 45.0%
TATAATTACTCCCTCCGTCC+CGG + chr4_1:73206701-73206720 None:intergenic 45.0%
TAAGCACCCACCATTGTAGA+TGG + chr4_1:73206827-73206846 None:intergenic 45.0%
!!! TTTCTTTTGAGGTGCTGGGT+TGG - chr4_1:73207041-73207060 Msa0570830:intron 45.0%
GCTCTGTTGTAGATGGTCTT+AGG - chr4_1:73207145-73207164 Msa0570830:intron 45.0%
! CTGTTGTAGATGGTCTTAGG+TGG - chr4_1:73207148-73207167 Msa0570830:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr4_1:73207356-73207375 Msa0570830:intron 45.0%
GACCAATCTTGTCATGTCCT+TGG + chr4_1:73207728-73207747 None:intergenic 45.0%
! CAACTAGTCTCCTAATGCCA+AGG + chr4_1:73208011-73208030 None:intergenic 45.0%
TGATCAACCGATCGAAACGA+AGG - chr4_1:73208206-73208225 Msa0570830:intron 45.0%
CAACTTCCTGAGATATACGG+TGG - chr4_1:73209279-73209298 Msa0570830:intron 45.0%
AGTTTGCCACCGTATATCTC+AGG + chr4_1:73209288-73209307 None:intergenic 45.0%
ATGATGTGTGACTGTGAGTG+CGG - chr4_1:73209741-73209760 Msa0570830:CDS 45.0%
! CGCAACAGTTCCTTCTCTTT+TGG - chr4_1:73209870-73209889 Msa0570830:five_prime_UTR 45.0%
! AGTTCCTTCTCTTTTGGTGG+TGG - chr4_1:73209876-73209895 Msa0570830:five_prime_UTR 45.0%
!!! CTTCTCTTTTGGTGGTGGTT+GGG - chr4_1:73209881-73209900 Msa0570830:five_prime_UTR 45.0%
!!! TTCTCTTTTGGTGGTGGTTG+GGG - chr4_1:73209882-73209901 Msa0570830:five_prime_UTR 45.0%
!! TATCATTTAAAAAAATTAAA+TGG + chr4_1:73199556-73199575 None:intergenic 5.0%
!! AAATAAAATAATTTAAATGA+AGG + chr4_1:73202830-73202849 None:intergenic 5.0%
!! GATTTATTTATATATATATA+AGG + chr4_1:73206001-73206020 None:intergenic 5.0%
!!! GAATTTTTTATTTATTTTAT+CGG - chr4_1:73206165-73206184 Msa0570830:intron 5.0%
!! TTTATTAAGATTTATTAAAT+AGG + chr4_1:73206962-73206981 None:intergenic 5.0%
!! GGCTCTCACAAGACGGATTT+TGG + chr4_1:73199279-73199298 None:intergenic 50.0%
ACGCACCCTTAGTGAACTTG+TGG + chr4_1:73199702-73199721 None:intergenic 50.0%
GTTAGGGTTATTCCTGGGTC+AGG + chr4_1:73200933-73200952 None:intergenic 50.0%
GACCCAGGAATAACCCTAAC+GGG - chr4_1:73200933-73200952 Msa0570830:intron 50.0%
! GGATTTTGCTACCGTGTTGG+CGG + chr4_1:73201139-73201158 None:intergenic 50.0%
ACGCGTAAGAACTCAGATCG+AGG - chr4_1:73201216-73201235 Msa0570830:CDS 50.0%
CGCGTAAGAACTCAGATCGA+GGG - chr4_1:73201217-73201236 Msa0570830:CDS 50.0%
CGTCTGGGTTACTGACGTAT+TGG + chr4_1:73201249-73201268 None:intergenic 50.0%
GTCAGTAACCCAGACGCTTT+CGG - chr4_1:73201253-73201272 Msa0570830:CDS 50.0%
TCAGTAACCCAGACGCTTTC+GGG - chr4_1:73201254-73201273 Msa0570830:CDS 50.0%
!! CGTTTAACCCGAAAGCGTCT+GGG + chr4_1:73201264-73201283 None:intergenic 50.0%
!! TCGTTTAACCCGAAAGCGTC+TGG + chr4_1:73201265-73201284 None:intergenic 50.0%
AAACGAACCAGACCCTTTGC+GGG - chr4_1:73201279-73201298 Msa0570830:CDS 50.0%
! TCTAAAACCCGCAAAGGGTC+TGG + chr4_1:73201289-73201308 None:intergenic 50.0%
! CTTGCTTGGCTTTCGATGTC+TGG + chr4_1:73201542-73201561 None:intergenic 50.0%
CAGACATCGAAAGCCAAGCA+AGG - chr4_1:73201540-73201559 Msa0570830:intron 50.0%
ATCGAAAGCCAAGCAAGGAG+AGG - chr4_1:73201545-73201564 Msa0570830:intron 50.0%
GTTTGTGATGTCCTTGGTGG+TGG + chr4_1:73201596-73201615 None:intergenic 50.0%
! GTGGTTTGTGATGTCCTTGG+TGG + chr4_1:73201599-73201618 None:intergenic 50.0%
CTTGCCTTCAAGCTTCTTCC+AGG + chr4_1:73201624-73201643 None:intergenic 50.0%
CTGGAAGAAGCTTGAAGGCA+AGG - chr4_1:73201622-73201641 Msa0570830:intron 50.0%
!!! GTTGGTTCGCAGGTGTGTTT+TGG + chr4_1:73201657-73201676 None:intergenic 50.0%
!! GTGTGTTGTTGTTGGTTCGC+AGG + chr4_1:73201667-73201686 None:intergenic 50.0%
AGGAACAACCAATCCGACTC+CGG - chr4_1:73201719-73201738 Msa0570830:intron 50.0%
! TTTCTAGCCGGAGAGTTGGT+CGG + chr4_1:73201792-73201811 None:intergenic 50.0%
ACCAACTCTCCGGCTAGAAA+TGG - chr4_1:73201792-73201811 Msa0570830:intron 50.0%
!! TCCATTTCTAGCCGGAGAGT+TGG + chr4_1:73201796-73201815 None:intergenic 50.0%
!! GGTGTTGCTCCATTTCTAGC+CGG + chr4_1:73201804-73201823 None:intergenic 50.0%
GCACAAAAACCCAGGACCAA+AGG - chr4_1:73201836-73201855 Msa0570830:intron 50.0%
CTCTGTTCTTCCTTTGGTCC+TGG + chr4_1:73201849-73201868 None:intergenic 50.0%
AGAACAAACCGTACAACCGC+CGG - chr4_1:73201944-73201963 Msa0570830:intron 50.0%
GGTAGTGCAGCCTTCAAACA+CGG - chr4_1:73201998-73202017 Msa0570830:intron 50.0%
! TTGGAAGGTTTGGATTGGGG+AGG - chr4_1:73202057-73202076 Msa0570830:intron 50.0%
! TGGATTGGGGAGGAGAAAAC+AGG - chr4_1:73202067-73202086 Msa0570830:intron 50.0%
GGATTGGGGAGGAGAAAACA+GGG - chr4_1:73202068-73202087 Msa0570830:intron 50.0%
! AGAGCACCTAGACACAAGTG+AGG - chr4_1:73203398-73203417 Msa0570830:intron 50.0%
AGGACTCCTCACTTGTGTCT+AGG + chr4_1:73203407-73203426 None:intergenic 50.0%
CGTATATGTTGTCTCGACCG+TGG + chr4_1:73203468-73203487 None:intergenic 50.0%
CCCCATCGCTAAGGTCATAA+AGG - chr4_1:73204024-73204043 Msa0570830:intron 50.0%
TGTTGCATAGTCAGCGATGG+GGG + chr4_1:73204107-73204126 None:intergenic 50.0%
CGATGTTGCATAGTCAGCGA+TGG + chr4_1:73204110-73204129 None:intergenic 50.0%
GAAGTTGCATGAGTCGGTCT+AGG + chr4_1:73204214-73204233 None:intergenic 50.0%
! TCACGTTTGAGACATGGCCT+CGG - chr4_1:73204765-73204784 Msa0570830:intron 50.0%
AGCAGCGTTCTTCGTTCCTA+AGG - chr4_1:73205747-73205766 Msa0570830:intron 50.0%
GATCAGATATTCCGAGACGG+AGG + chr4_1:73206489-73206508 None:intergenic 50.0%
!! CCAAACTGGCTCGGATATAC+CGG - chr4_1:73206679-73206698 Msa0570830:intron 50.0%
!! CAAACTGGCTCGGATATACC+GGG - chr4_1:73206680-73206699 Msa0570830:intron 50.0%
TGTTACAAGCCACCCTTTGG+TGG + chr4_1:73207368-73207387 None:intergenic 50.0%
GCCCAAGGACATGACAAGAT+TGG - chr4_1:73207723-73207742 Msa0570830:intron 50.0%
TCTCTCAGCATTTCTGCTCG+AGG - chr4_1:73207980-73207999 Msa0570830:intron 50.0%
! TATACCATTGGTGCCCCACT+CGG - chr4_1:73208120-73208139 Msa0570830:intron 50.0%
TGATGTATCAGCATGCCACC+TGG - chr4_1:73208503-73208522 Msa0570830:intron 50.0%
GATGTATCAGCATGCCACCT+GGG - chr4_1:73208504-73208523 Msa0570830:intron 50.0%
ATGTATCAGCATGCCACCTG+GGG - chr4_1:73208505-73208524 Msa0570830:intron 50.0%
ACTGCAATTAGTCCCCATCC+AGG - chr4_1:73209305-73209324 Msa0570830:intron 50.0%
CCAACCACCACCAAAAGAGA+AGG + chr4_1:73209883-73209902 None:intergenic 50.0%
!!! CCTTCTCTTTTGGTGGTGGT+TGG - chr4_1:73209880-73209899 Msa0570830:five_prime_UTR 50.0%
AGCGGTGAAGGGTTGCAAGA+AGG - chr4_1:73199181-73199200 Msa0570830:three_prime_UTR 55.0%
GCGGTGAAGGGTTGCAAGAA+GGG - chr4_1:73199182-73199201 Msa0570830:three_prime_UTR 55.0%
TTGGTTTCGTACCCGTACGC+GGG + chr4_1:73201045-73201064 None:intergenic 55.0%
CTTGGTTTCGTACCCGTACG+CGG + chr4_1:73201046-73201065 None:intergenic 55.0%
GAATGGATCGACCGCCAACA+CGG - chr4_1:73201125-73201144 Msa0570830:intron 55.0%
ATCAGGGAGCTGTTGGCACT+TGG + chr4_1:73201160-73201179 None:intergenic 55.0%
GCTGTTCATCAGGGAGCTGT+TGG + chr4_1:73201167-73201186 None:intergenic 55.0%
ACAGCCTCCAAGAACCCCTA+CGG - chr4_1:73201461-73201480 Msa0570830:intron 55.0%
TGGTTTCGCTGCTACCGTAG+GGG + chr4_1:73201478-73201497 None:intergenic 55.0%
GTGGTTTCGCTGCTACCGTA+GGG + chr4_1:73201479-73201498 None:intergenic 55.0%
TGTGGTTTCGCTGCTACCGT+AGG + chr4_1:73201480-73201499 None:intergenic 55.0%
!! TCGACGCTGTTTCTAGGTGG+TGG + chr4_1:73201572-73201591 None:intergenic 55.0%
!! GGATCGACGCTGTTTCTAGG+TGG + chr4_1:73201575-73201594 None:intergenic 55.0%
!! GGTGGATCGACGCTGTTTCT+AGG + chr4_1:73201578-73201597 None:intergenic 55.0%
! GCGGTGGTTTGTGATGTCCT+TGG + chr4_1:73201602-73201621 None:intergenic 55.0%
TTCAAGCTTCTTCCAGGCGG+TGG + chr4_1:73201618-73201637 None:intergenic 55.0%
ACCGCCTGGAAGAAGCTTGA+AGG - chr4_1:73201617-73201636 Msa0570830:intron 55.0%
GCCTTCAAGCTTCTTCCAGG+CGG + chr4_1:73201621-73201640 None:intergenic 55.0%
!! GGTTCGCAGGTGTGTTTTGG+TGG + chr4_1:73201654-73201673 None:intergenic 55.0%
AGACACCACCGAAACCCAAC+CGG - chr4_1:73201687-73201706 Msa0570830:intron 55.0%
!! TTCCTTTGGGTTGGCCGGTT+GGG + chr4_1:73201704-73201723 None:intergenic 55.0%
!! GGTTGTTCCTTTGGGTTGGC+CGG + chr4_1:73201709-73201728 None:intergenic 55.0%
GGAGAAAGAGCGACGGTTGA+CGG - chr4_1:73201971-73201990 Msa0570830:intron 55.0%
GAGAAAGAGCGACGGTTGAC+GGG - chr4_1:73201972-73201991 Msa0570830:intron 55.0%
TTGGGGAGGAGAAAACAGGG+AGG - chr4_1:73202071-73202090 Msa0570830:intron 55.0%
GCATTAAGCCCCCATCGCTA+AGG - chr4_1:73203974-73203993 Msa0570830:intron 55.0%
ATGGGGGCTTAATGCCTGAC+AGG + chr4_1:73204050-73204069 None:intergenic 55.0%
GCATTAAGCCCCCATCGCTA+AGG - chr4_1:73203974-73203993 Msa0570830:intron 55.0%
ATGGGGGCTTAATGCCTGAC+AGG + chr4_1:73204050-73204069 None:intergenic 55.0%
! CACGTTTGAGACATGGCCTC+GGG - chr4_1:73204766-73204785 Msa0570830:intron 55.0%
! GAGCGCTTGTTGGGAGAAAG+AGG + chr4_1:73205799-73205818 None:intergenic 55.0%
CCGGTATATCCGAGCCAGTT+TGG + chr4_1:73206682-73206701 None:intergenic 55.0%
TAGGTGGCTATGGAGAAGGG+TGG - chr4_1:73206898-73206917 Msa0570830:intron 55.0%
GCTATGGAGAAGGGTGGCTA+TGG - chr4_1:73206904-73206923 Msa0570830:intron 55.0%
CTTGTCATGTCCTTGGGCGA+AGG + chr4_1:73207721-73207740 None:intergenic 55.0%
!! GCCATTTTGGGGGATTCGCA+GGG + chr4_1:73207955-73207974 None:intergenic 55.0%
!! AGCCATTTTGGGGGATTCGC+AGG + chr4_1:73207956-73207975 None:intergenic 55.0%
TTCTGCTCGAGGAGATCCCT+TGG - chr4_1:73207991-73208010 Msa0570830:intron 55.0%
CGAGGAGATCCCTTGGCATT+AGG - chr4_1:73207998-73208017 Msa0570830:intron 55.0%
! ATACCATTGGTGCCCCACTC+GGG - chr4_1:73208121-73208140 Msa0570830:intron 55.0%
! TGGTGCCCTCTCCATTTTGC+AGG - chr4_1:73208598-73208617 Msa0570830:intron 55.0%
GCTACCGTAGGGGTTCTTGG+AGG + chr4_1:73201468-73201487 None:intergenic 60.0%
GCTGCTACCGTAGGGGTTCT+TGG + chr4_1:73201471-73201490 None:intergenic 60.0%
GTGGTGGTCCTCTCCTTGCT+TGG + chr4_1:73201556-73201575 None:intergenic 60.0%
!! ACAGCGTCGATCCACCACCA+AGG - chr4_1:73201582-73201601 Msa0570830:intron 60.0%
GGACATCACAAACCACCGCC+TGG - chr4_1:73201603-73201622 Msa0570830:intron 60.0%
!! TGGGTTGGCCGGTTGGGTTT+CGG + chr4_1:73201698-73201717 None:intergenic 60.0%
AACCCAACCGGCCAACCCAA+AGG - chr4_1:73201699-73201718 Msa0570830:intron 60.0%
!! GTTCCTTTGGGTTGGCCGGT+TGG + chr4_1:73201705-73201724 None:intergenic 60.0%
CACTGTCACTGCCTTGTCGC+CGG + chr4_1:73201741-73201760 None:intergenic 60.0%
!! GTGGTGGTGTCGTCGCTGTT+CGG + chr4_1:73201770-73201789 None:intergenic 60.0%
ACCACCACCGACCAACTCTC+CGG - chr4_1:73201782-73201801 Msa0570830:intron 60.0%
CGTCGCTCTTTCTCCTCTGC+CGG + chr4_1:73201966-73201985 None:intergenic 60.0%
CGGCAGAGGAGAAAGAGCGA+CGG - chr4_1:73201964-73201983 Msa0570830:intron 60.0%
GGTGCTCTCGCCGTGTTTGA+AGG + chr4_1:73202011-73202030 None:intergenic 60.0%
GGGAGGAGAAAACAGGGAGG+CGG - chr4_1:73202074-73202093 Msa0570830:intron 60.0%
CTCGACCGTGGGTAATGTGC+AGG + chr4_1:73203456-73203475 None:intergenic 60.0%
ATGGGGGCTTAATGCCCTGG+TGG + chr4_1:73203969-73203988 None:intergenic 60.0%
!! CTGGCTCGGATATACCGGGA+CGG - chr4_1:73206684-73206703 Msa0570830:intron 60.0%
CTCGGATATACCGGGACGGA+GGG - chr4_1:73206688-73206707 Msa0570830:intron 60.0%
CAAGACAAGGCCTTCGCCCA+AGG - chr4_1:73207708-73207727 Msa0570830:intron 60.0%
TTGGGGGATTCGCAGGGCAT+TGG + chr4_1:73207949-73207968 None:intergenic 60.0%
GCCCTGCGAATCCCCCAAAA+TGG - chr4_1:73207951-73207970 Msa0570830:intron 60.0%
CAACCCAGCGAACCCGCGTA+CGG - chr4_1:73201030-73201049 Msa0570830:intron 65.0%
AACCCAGCGAACCCGCGTAC+GGG - chr4_1:73201031-73201050 Msa0570830:intron 65.0%
TACCCGTACGCGGGTTCGCT+GGG + chr4_1:73201036-73201055 None:intergenic 65.0%
GTTGGCCGGTTGGGTTTCGG+TGG + chr4_1:73201695-73201714 None:intergenic 65.0%
CCTTGTCGCCGGAGTCGGAT+TGG + chr4_1:73201730-73201749 None:intergenic 65.0%
CCAATCCGACTCCGGCGACA+AGG - chr4_1:73201727-73201746 Msa0570830:intron 65.0%
CACTGCCTTGTCGCCGGAGT+CGG + chr4_1:73201735-73201754 None:intergenic 65.0%
!! GTGGTGTCGTCGCTGTTCGG+TGG + chr4_1:73201767-73201786 None:intergenic 65.0%
! CTAGCCGGAGAGTTGGTCGG+TGG + chr4_1:73201789-73201808 None:intergenic 65.0%
AACCGTACAACCGCCGGCAG+AGG - chr4_1:73201950-73201969 Msa0570830:intron 65.0%
CTCCTCTGCCGGCGGTTGTA+CGG + chr4_1:73201955-73201974 None:intergenic 65.0%
CGCTCTTTCTCCTCTGCCGG+CGG + chr4_1:73201963-73201982 None:intergenic 65.0%
AGAGCGACGGTTGACGGGAG+AGG - chr4_1:73201977-73201996 Msa0570830:intron 65.0%
GCGATGGGGGCTTAATGCCC+TGG + chr4_1:73203972-73203991 None:intergenic 65.0%
GCTCGGATATACCGGGACGG+AGG - chr4_1:73206687-73206706 Msa0570830:intron 65.0%
!! AGCGAAGGGAGCACCCGAGT+GGG + chr4_1:73208137-73208156 None:intergenic 65.0%
!! TAGCGAAGGGAGCACCCGAG+TGG + chr4_1:73208138-73208157 None:intergenic 65.0%
! GGGGGCATGAGACCTGACCC+AGG - chr4_1:73200918-73200937 Msa0570830:intron 70.0%
GTACCCGTACGCGGGTTCGC+TGG + chr4_1:73201037-73201056 None:intergenic 70.0%
! GCCGGAGAGTTGGTCGGTGG+TGG + chr4_1:73201786-73201805 None:intergenic 70.0%
! GCACCCGAGTGGGGCACCAA+TGG + chr4_1:73208127-73208146 None:intergenic 70.0%
!! GCGAAGGGAGCACCCGAGTG+GGG + chr4_1:73208136-73208155 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 73199030 73209909 73199030 ID=Msa0570830;Name=Msa0570830
chr4_1 mRNA 73199030 73209909 73199030 ID=Msa0570830-mRNA-1;Parent=Msa0570830;Name=Msa0570830-mRNA-1;_AED=0.28;_eAED=0.28;_QI=143|0.8|1|1|0.6|0.66|6|540|225
chr4_1 exon 73199030 73199493 73199030 ID=Msa0570830-mRNA-1:exon:25122;Parent=Msa0570830-mRNA-1
chr4_1 exon 73199525 73199720 73199525 ID=Msa0570830-mRNA-1:exon:25121;Parent=Msa0570830-mRNA-1
chr4_1 exon 73200320 73200425 73200320 ID=Msa0570830-mRNA-1:exon:25120;Parent=Msa0570830-mRNA-1
chr4_1 exon 73200508 73200544 73200508 ID=Msa0570830-mRNA-1:exon:25119;Parent=Msa0570830-mRNA-1
chr4_1 exon 73201126 73201384 73201126 ID=Msa0570830-mRNA-1:exon:25118;Parent=Msa0570830-mRNA-1
chr4_1 exon 73209611 73209909 73209611 ID=Msa0570830-mRNA-1:exon:25117;Parent=Msa0570830-mRNA-1
chr4_1 five_prime_UTR 73209767 73209909 73209767 ID=Msa0570830-mRNA-1:five_prime_utr;Parent=Msa0570830-mRNA-1
chr4_1 CDS 73209611 73209766 73209611 ID=Msa0570830-mRNA-1:cds;Parent=Msa0570830-mRNA-1
chr4_1 CDS 73201126 73201384 73201126 ID=Msa0570830-mRNA-1:cds;Parent=Msa0570830-mRNA-1
chr4_1 CDS 73200508 73200544 73200508 ID=Msa0570830-mRNA-1:cds;Parent=Msa0570830-mRNA-1
chr4_1 CDS 73200320 73200425 73200320 ID=Msa0570830-mRNA-1:cds;Parent=Msa0570830-mRNA-1
chr4_1 CDS 73199601 73199720 73199601 ID=Msa0570830-mRNA-1:cds;Parent=Msa0570830-mRNA-1
chr4_1 three_prime_UTR 73199525 73199600 73199525 ID=Msa0570830-mRNA-1:three_prime_utr;Parent=Msa0570830-mRNA-1
chr4_1 three_prime_UTR 73199030 73199493 73199030 ID=Msa0570830-mRNA-1:three_prime_utr;Parent=Msa0570830-mRNA-1
Gene Sequence

>Msa0570830

ATGGAAGAAGCGGTGAAGGGTTGCAAGAAGGGAACAAGATTAGAAGATTGTAACAAAGATTTAGCGTATGCTGCAAATGATGTTGTTACAGAAACTGAACTGACCAAAATCCGTCTTGTGAGAGCCTTTGTTGAAACACAAGATCCATCTTCTAAGGAAGAAGATGATTTGATGATCAGAAGATTTCTACGTGCTCGTGATTTAGATGTAGAGAAGGCTTCAGCAATGTTCCTCAAGTACTTGAAATGGAGACATTCATTTGTTCCAAATGGTTCCATATCTCTATCACAGGTTCCTAATCAAATTGCACAAGACAAGGCCTTCGCCCAAGGACATGACAAGATTGGTCGACCAATACTTCTTGTCTTTGGTGGAAGACATTTTCAAAAGAAGGATGGTCTAGATGAATTCAAACGGTTTGCAGTTTATATTCTTGATAAACTATGTGCAAGCATGCCACCTGGGGAAGAAAAATTTGTTGGTATAGCAGAACTCAAAGGATGGGGTTACTCAAATAGTGATTTGCGTGGATACATTGGTGCCCTCTCCATTTTGCAGATAGTATTTGTGGAAAACAATAAGCTGAAATCAACACTTTTAGAAGATATAGACGAAAGTCAACTTCCTGAGATATACGGTGGCAAACTGCAATTAGTCCCCATCCAGGATAGCTATTAA
Protein sequence

>Msa0570830

MEEAVKGCKKGTRLEDCNKDLAYAANDVVTETELTKIRLVRAFVETQDPSSKEEDDLMIRRFLRARDLDVEKASAMFLKYLKWRHSFVPNGSISLSQVPNQIAQDKAFAQGHDKIGRPILLVFGGRHFQKKDGLDEFKRFAVYILDKLCASMPPGEEKFVGIAELKGWGYSNSDLRGYIGALSILQIVFVENNKLKSTLLEDIDESQLPEIYGGKLQLVPIQDSY*