Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591030 | XP_003605133.2 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 3.62e-105 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591030 | sp|P62302|RS13_SOYBN | 94.702 | 151 | 8 | 0 | 1 | 151 | 1 | 151 | 5.05e-102 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591030 | B7FGJ7 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 1.73e-105 | 306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0191450 | Msa0591030 | 0.818757 | 1.659670e-52 | -8.615850e-47 |
| Msa0191550 | Msa0591030 | 0.804279 | 2.331233e-49 | -8.615850e-47 |
| Msa0192350 | Msa0591030 | 0.841835 | 3.733683e-58 | -8.615850e-47 |
| Msa0540480 | Msa0591030 | 0.809408 | 1.920767e-50 | -8.615850e-47 |
| Msa0576280 | Msa0591030 | 0.809749 | 1.622407e-50 | -8.615850e-47 |
| Msa0591030 | Msa0591050 | 0.964270 | 4.073496e-123 | -8.615850e-47 |
| Msa0591030 | Msa0705800 | 0.816467 | 5.448230e-52 | -8.615850e-47 |
| Msa0591030 | Msa0876170 | 0.800896 | 1.162138e-48 | -8.615850e-47 |
| Msa0591030 | Msa1418770 | 0.830558 | 2.745235e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591030 | MtrunA17_Chr4g0011261 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 3.33e-109 | 306 |
| Msa0591030 | MtrunA17_Chr4g0056921 | 94.040 | 151 | 9 | 0 | 1 | 151 | 1 | 151 | 2.54e-102 | 289 |
| Msa0591030 | MtrunA17_Chr5g0398801 | 94.702 | 151 | 8 | 0 | 1 | 151 | 1 | 151 | 4.30e-102 | 289 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591030 | AT4G00100.1 | 91.391 | 151 | 13 | 0 | 1 | 151 | 1 | 151 | 8.65e-100 | 283 |
| Msa0591030 | AT3G60770.1 | 91.391 | 151 | 13 | 0 | 1 | 151 | 1 | 151 | 3.52e-99 | 281 |
Find 53 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAAATTCAGGCTAATTT+TGG | 0.149134 | 4_2:-15109524 | Msa0591030:CDS |
| GACCAAAATTAGCCTGAATT+TGG | 0.223891 | 4_2:+15109522 | None:intergenic |
| TATGCGCAAAATCTTGTTTC+CGG | 0.257809 | 4_2:+15109763 | None:intergenic |
| AAAGAGAGTATATCAATTAA+AGG | 0.262021 | 4_2:+15108688 | None:intergenic |
| AGATGGAGTTAGACCTTTCT+TGG | 0.271027 | 4_2:+15109841 | None:intergenic |
| AATAGAAAATTTAAAACTAA+TGG | 0.271717 | 4_2:+15108660 | None:intergenic |
| TACAGATCTTCAGGAATTTC+AGG | 0.309178 | 4_2:+15109610 | None:intergenic |
| ATCAGGTGATACAGATCTTC+AGG | 0.338551 | 4_2:+15109601 | None:intergenic |
| TAGTATTCTTCTATCTGTTT+TGG | 0.343594 | 4_2:-15108602 | Msa0591030:three_prime_UTR |
| CAAAGAAGCTTCCACCAGTA+TGG | 0.349985 | 4_2:-15109459 | Msa0591030:CDS |
| GGTCTAACTCCATCTCAAAT+TGG | 0.359176 | 4_2:-15109833 | Msa0591030:CDS |
| ATAGAAAATTTAAAACTAAT+GGG | 0.361924 | 4_2:+15108661 | None:intergenic |
| CTTCTCTCCTCATTTGTCAC+TGG | 0.366533 | 4_2:-15115322 | None:intergenic |
| GGAAGCATTTGGAGAGGAAC+AGG | 0.374872 | 4_2:-15109558 | Msa0591030:CDS |
| TCAAGAAGGCTGTCTCAATT+AGG | 0.379771 | 4_2:-15109579 | Msa0591030:CDS |
| AATACTTACTATTTCCATAC+TGG | 0.381602 | 4_2:+15109445 | None:intergenic |
| TTGAGACAGCCTTCTTGATC+AGG | 0.385210 | 4_2:+15109584 | None:intergenic |
| CTTGCTGGTGTTCTCTTGTA+AGG | 0.404266 | 4_2:+15115083 | None:intergenic |
| CCATGGAATTGCTCAGGTTA+AGG | 0.405652 | 4_2:-15109792 | Msa0591030:CDS |
| TTCTCCTCAATCATTCATCA+TGG | 0.427391 | 4_2:-15115243 | Msa0591030:exon |
| TGTCTCAATTAGGAAGCATT+TGG | 0.438327 | 4_2:-15109569 | Msa0591030:CDS |
| AGGACAAGGACTCCAAATTC+AGG | 0.445955 | 4_2:-15109534 | Msa0591030:CDS |
| GAGATCTTGAGCCAACTTGC+TGG | 0.447833 | 4_2:+15115068 | None:intergenic |
| ATCTGCAAGTTTGCCAAGAA+AGG | 0.457907 | 4_2:-15109854 | Msa0591030:CDS |
| GCTCAGGTTAAGGCTGTAAC+CGG | 0.462422 | 4_2:-15109782 | Msa0591030:CDS |
| TGTATATTTATTCTAAGTGA+TGG | 0.484794 | 4_2:-15108562 | Msa0591030:three_prime_UTR |
| ACTCTTGTTGCTTGAAGAGA+TGG | 0.495938 | 4_2:-15108854 | Msa0591030:exon |
| TGACTCCCATGGAATTGCTC+AGG | 0.496575 | 4_2:-15109798 | Msa0591030:CDS |
| GTTATTCTTCGTGACTCCCA+TGG | 0.508409 | 4_2:-15109809 | Msa0591030:CDS |
| CCTTAACCTGAGCAATTCCA+TGG | 0.520963 | 4_2:+15109792 | None:intergenic |
| TTTCTTGGCAAACTTGCAGA+TGG | 0.531932 | 4_2:+15109856 | None:intergenic |
| TCTCCTCAATCATTCATCAT+GGG | 0.533082 | 4_2:-15115242 | Msa0591030:exon |
| ACTTAGAATAAATATACATC+CGG | 0.537014 | 4_2:+15108567 | None:intergenic |
| TCTTCAAGCAACAAGAGTGC+TGG | 0.541036 | 4_2:+15108859 | None:intergenic |
| TAAATTCATTTGTAAGACCA+TGG | 0.547018 | 4_2:+15108636 | None:intergenic |
| ACTTACTATTTCCATACTGG+TGG | 0.562660 | 4_2:+15109448 | None:intergenic |
| TATAGTAACGAGCAAGGCGA+TGG | 0.565886 | 4_2:+15109488 | None:intergenic |
| TGGGTCGTATGCACAGTGGC+GGG | 0.571625 | 4_2:-15115223 | Msa0591030:intron |
| CGACCCATGATGAATGATTG+AGG | 0.575216 | 4_2:+15115239 | None:intergenic |
| AGAATAACACCAATTTGAGA+TGG | 0.576179 | 4_2:+15109824 | None:intergenic |
| TCTTCTTATAGTAACGAGCA+AGG | 0.583518 | 4_2:+15109482 | None:intergenic |
| ACAAGAGAACACCAGCAAGT+TGG | 0.596373 | 4_2:-15115079 | Msa0591030:CDS |
| TTGGCTCAAGATCTCTACCC+AGG | 0.597059 | 4_2:-15115060 | Msa0591030:CDS |
| TCTGTATCACCTGATCAAGA+AGG | 0.601322 | 4_2:-15109593 | Msa0591030:CDS |
| TTGTTGCTTGAAGAGATGGT+CGG | 0.609763 | 4_2:-15108850 | Msa0591030:exon |
| ATGGGTCGTATGCACAGTGG+CGG | 0.611401 | 4_2:-15115224 | Msa0591030:CDS |
| TTGCGCATATTGAAGGCGCA+TGG | 0.612509 | 4_2:-15109749 | Msa0591030:intron |
| CAATTAGGAAGCATTTGGAG+AGG | 0.640013 | 4_2:-15109564 | Msa0591030:CDS |
| CTTAACCTGAGCAATTCCAT+GGG | 0.650971 | 4_2:+15109793 | None:intergenic |
| GGAGAGGAACAGGAAGGACA+AGG | 0.660004 | 4_2:-15109548 | Msa0591030:CDS |
| CTTTGTGCCAGTGACAAATG+AGG | 0.660665 | 4_2:+15115315 | None:intergenic |
| GCATTTGGAGAGGAACAGGA+AGG | 0.678718 | 4_2:-15109554 | Msa0591030:CDS |
| ATCATGGGTCGTATGCACAG+TGG | 0.744971 | 4_2:-15115227 | Msa0591030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTAAATTTTTTTAAA+GGG | + | chr4_2:15108858-15108877 | None:intergenic | 0.0% |
| !!! | TAAAAATTAAATTTTTTTAA+AGG | + | chr4_2:15108859-15108878 | None:intergenic | 0.0% |
| !! | TATATATATTATTAAAAAAA+AGG | + | chr4_2:15111950-15111969 | None:intergenic | 0.0% |
| !! | TTTAAAAAATTTAAAAAAAT+AGG | - | chr4_2:15112111-15112130 | Msa0591030:intron | 0.0% |
| !!! | ATTTTTTTAAATAAAAAATA+CGG | + | chr4_2:15112578-15112597 | None:intergenic | 0.0% |
| !!! | TAAATTTTTTTTATAATTTT+CGG | - | chr4_2:15112632-15112651 | Msa0591030:intron | 0.0% |
| !!! | TATATATATATATAAATTTT+TGG | - | chr4_2:15113152-15113171 | Msa0591030:intron | 0.0% |
| !!! | ATATATATATATAAATTTTT+GGG | - | chr4_2:15113153-15113172 | Msa0591030:intron | 0.0% |
| !!! | TTTCTGATTTTTTATTTTAT+TGG | - | chr4_2:15108885-15108904 | Msa0591030:intron | 10.0% |
| !!! | TTCTGATTTTTTATTTTATT+GGG | - | chr4_2:15108886-15108905 | Msa0591030:intron | 10.0% |
| !! | AGAAAAAATTAATTTAGATT+GGG | + | chr4_2:15110002-15110021 | None:intergenic | 10.0% |
| !! | AAGAAAAAATTAATTTAGAT+TGG | + | chr4_2:15110003-15110022 | None:intergenic | 10.0% |
| !!! | ATTTAAAATTTAAATGCATT+CGG | + | chr4_2:15110276-15110295 | None:intergenic | 10.0% |
| !!! | AATGCATTTAAATTTTAAAT+TGG | - | chr4_2:15110276-15110295 | Msa0591030:intron | 10.0% |
| !! | AAAAACTAAAATAAAATCTA+AGG | + | chr4_2:15110814-15110833 | None:intergenic | 10.0% |
| !!! | TTTATGTCAATTTTATATTT+AGG | - | chr4_2:15110990-15111009 | Msa0591030:intron | 10.0% |
| !! | TAAAATAAAAATTCAGAAAT+CGG | - | chr4_2:15111284-15111303 | Msa0591030:intron | 10.0% |
| !! | AAAAAATCATAAAAAATTTC+TGG | - | chr4_2:15111522-15111541 | Msa0591030:intron | 10.0% |
| !!! | TAATTTATTTTCAGATTTTT+CGG | + | chr4_2:15111575-15111594 | None:intergenic | 10.0% |
| !!! | TATAATTTTTAGATTTTTTC+CGG | + | chr4_2:15111544-15111563 | None:intergenic | 10.0% |
| !!! | TGATTTTTAAATTTATTTTC+AGG | + | chr4_2:15112338-15112357 | None:intergenic | 10.0% |
| !! | AATAAATACAAAAAAAAACT+GGG | + | chr4_2:15111923-15111942 | None:intergenic | 10.0% |
| !! | AAATAAATACAAAAAAAAAC+TGG | + | chr4_2:15111924-15111943 | None:intergenic | 10.0% |
| !!! | AAATTTATTTTCAGATTAAT+TGG | - | chr4_2:15112346-15112365 | Msa0591030:intron | 10.0% |
| !!! | ATAATTTTCAGTTTTTTTTT+CGG | - | chr4_2:15112692-15112711 | Msa0591030:intron | 10.0% |
| !! | TAAAATAAAAATTCAGAAAT+CGG | + | chr4_2:15111284-15111303 | None:intergenic | 10.0% |
| !!! | ATTTTTTATCATTAATGTTA+AGG | - | chr4_2:15112989-15113008 | Msa0591030:intron | 10.0% |
| !!! | TTTTTTTTTATCGATTTATT+AGG | - | chr4_2:15114480-15114499 | Msa0591030:intron | 10.0% |
| !!! | ATAGAAAATTTAAAACTAAT+GGG | + | chr4_2:15115217-15115236 | None:intergenic | 10.0% |
| !!! | AATAGAAAATTTAAAACTAA+TGG | + | chr4_2:15115218-15115237 | None:intergenic | 10.0% |
| !!! | TTTACTTTGTTATGAAAATT+TGG | - | chr4_2:15109524-15109543 | Msa0591030:CDS | 15.0% |
| !!! | TTTTGATACATAAATTTTAG+AGG | + | chr4_2:15110851-15110870 | None:intergenic | 15.0% |
| !! | AAAATTTATGTATCAAAACT+TGG | - | chr4_2:15110853-15110872 | Msa0591030:intron | 15.0% |
| !! | AAATTTATGTATCAAAACTT+GGG | - | chr4_2:15110854-15110873 | Msa0591030:intron | 15.0% |
| !!! | TTATGATCATCATTTTTTTT+AGG | - | chr4_2:15111207-15111226 | Msa0591030:intron | 15.0% |
| !!! | TTCTGAATTTTTATTTTACA+AGG | + | chr4_2:15112892-15112911 | None:intergenic | 15.0% |
| !!! | AAATTTATTTTCAGGTTTTT+CGG | + | chr4_2:15111647-15111666 | None:intergenic | 15.0% |
| !! | ATAAATACAAAAAAAAACTG+GGG | + | chr4_2:15111922-15111941 | None:intergenic | 15.0% |
| !!! | TTCTGAATTTTTATTTTACA+AGG | - | chr4_2:15112892-15112911 | Msa0591030:intron | 15.0% |
| !!! | TTTTAATTTCATACTGAAAA+AGG | + | chr4_2:15113493-15113512 | None:intergenic | 15.0% |
| !! | TATCATTAATATCTTCTTAT+AGG | + | chr4_2:15113660-15113679 | None:intergenic | 15.0% |
| !!! | ATCTCATAAGTAATTATTTT+AGG | - | chr4_2:15114690-15114709 | Msa0591030:intron | 15.0% |
| !! | AACATTATAAAGATAAAATG+TGG | + | chr4_2:15114790-15114809 | None:intergenic | 15.0% |
| !!! | TTTTTTCAACTTATTGTCAT+AGG | + | chr4_2:15109267-15109286 | None:intergenic | 20.0% |
| !!! | TCTCAATTAATTTTGTCTTT+AGG | - | chr4_2:15109410-15109429 | Msa0591030:intron | 20.0% |
| !!! | ATTTAAATTTTAAATTGGCG+TGG | - | chr4_2:15110281-15110300 | Msa0591030:intron | 20.0% |
| !!! | AAAAGTGCATAAATTCAAAA+GGG | + | chr4_2:15110565-15110584 | None:intergenic | 20.0% |
| !!! | AAAAAGTGCATAAATTCAAA+AGG | + | chr4_2:15110566-15110585 | None:intergenic | 20.0% |
| !! | GTTAATTGTTAACTTATTGT+CGG | - | chr4_2:15110603-15110622 | Msa0591030:intron | 20.0% |
| !! | TTAATTGTTAACTTATTGTC+GGG | - | chr4_2:15110604-15110623 | Msa0591030:intron | 20.0% |
| !!! | TATGTTTAATTGTTTCTACT+AGG | - | chr4_2:15110723-15110742 | Msa0591030:intron | 20.0% |
| !! | TAAATACAAAAAAAAACTGG+GGG | + | chr4_2:15111921-15111940 | None:intergenic | 20.0% |
| !!! | AAAATACATTTTCCAAAATC+TGG | - | chr4_2:15112197-15112216 | Msa0591030:intron | 20.0% |
| !!! | CTAAATTTTTTTCCAGATTT+TGG | + | chr4_2:15112212-15112231 | None:intergenic | 20.0% |
| !! | CAAAATCTGGAAAAAAATTT+AGG | - | chr4_2:15112210-15112229 | Msa0591030:intron | 20.0% |
| !!! | ATACTCATATTTCTCTTTTT+GGG | - | chr4_2:15113406-15113425 | Msa0591030:intron | 20.0% |
| !!! | TTTTGTCAATTTTCGTTTTT+TGG | + | chr4_2:15113853-15113872 | None:intergenic | 20.0% |
| !!! | ACTGAATTTTTTTATTTGCT+TGG | - | chr4_2:15114523-15114542 | Msa0591030:intron | 20.0% |
| !!! | ATTTAAAACCAAGAAAATTC+AGG | + | chr4_2:15114558-15114577 | None:intergenic | 20.0% |
| !!! | GTATTCTCTATCTTAATTTT+TGG | - | chr4_2:15114832-15114851 | Msa0591030:intron | 20.0% |
| !!! | TAAATTTTTGTTCCTGATTA+AGG | - | chr4_2:15114924-15114943 | Msa0591030:intron | 20.0% |
| !!! | TTCATGTGATTTTGAAATTT+TGG | - | chr4_2:15115106-15115125 | Msa0591030:CDS | 20.0% |
| !!! | AAAGAGAGTATATCAATTAA+AGG | + | chr4_2:15115190-15115209 | None:intergenic | 20.0% |
| !!! | TTTTAAATTTTCTATTGCCA+TGG | - | chr4_2:15115222-15115241 | Msa0591030:intron | 20.0% |
| !! | ACTTAGAATAAATATACATC+CGG | + | chr4_2:15115311-15115330 | None:intergenic | 20.0% |
| !! | TGTATATTTATTCTAAGTGA+TGG | - | chr4_2:15115313-15115332 | Msa0591030:five_prime_UTR | 20.0% |
| !!! | TGATTTAGTTTTTTGACACT+CGG | - | chr4_2:15109103-15109122 | Msa0591030:intron | 25.0% |
| ! | CTAGACATTACAAAAAGAAT+TGG | + | chr4_2:15109438-15109457 | None:intergenic | 25.0% |
| ! | GCTTATGAAATTTGTCATTA+TGG | - | chr4_2:15109916-15109935 | Msa0591030:intron | 25.0% |
| ! | TCTTTCATTAATCACTTTAG+TGG | - | chr4_2:15110019-15110038 | Msa0591030:intron | 25.0% |
| ! | TTCATGTTAATAGATCAGTA+AGG | - | chr4_2:15110177-15110196 | Msa0591030:intron | 25.0% |
| ! | TCATGTTAATAGATCAGTAA+GGG | - | chr4_2:15110178-15110197 | Msa0591030:intron | 25.0% |
| !!! | TTGTGTTTTTTAATGTAGTC+TGG | - | chr4_2:15110218-15110237 | Msa0591030:intron | 25.0% |
| ! | AATTTAAATGCATTCGGATT+AGG | + | chr4_2:15110270-15110289 | None:intergenic | 25.0% |
| ! | AAAGTGCATAAATTCAAAAG+GGG | + | chr4_2:15110564-15110583 | None:intergenic | 25.0% |
| ! | ACAATTAACTACAGAAATAC+TGG | + | chr4_2:15110592-15110611 | None:intergenic | 25.0% |
| ! | TTTAGGCTTAAATAGTACAT+TGG | - | chr4_2:15111224-15111243 | Msa0591030:intron | 25.0% |
| !! | AAAAGACAGAAAATTTTGCA+GGG | + | chr4_2:15112863-15112882 | None:intergenic | 25.0% |
| !! | TAAAAGACAGAAAATTTTGC+AGG | + | chr4_2:15112862-15112881 | None:intergenic | 25.0% |
| ! | CAAAAAAATCAAAACAACAC+TGG | + | chr4_2:15111840-15111859 | None:intergenic | 25.0% |
| ! | AAATACAAAAAAAAACTGGG+GGG | + | chr4_2:15111920-15111939 | None:intergenic | 25.0% |
| !! | TAAAAGACAGAAAATTTTGC+AGG | - | chr4_2:15112862-15112881 | Msa0591030:intron | 25.0% |
| !! | AAAAGACAGAAAATTTTGCA+GGG | - | chr4_2:15112863-15112882 | Msa0591030:intron | 25.0% |
| ! | AAAAGGCTTAAATAGTACAT+TGG | + | chr4_2:15112950-15112969 | None:intergenic | 25.0% |
| ! | TCCACATGTAGATAAAAAAA+AGG | + | chr4_2:15112967-15112986 | None:intergenic | 25.0% |
| !! | CATACTCATATTTCTCTTTT+TGG | - | chr4_2:15113405-15113424 | Msa0591030:intron | 25.0% |
| !! | TACTCATATTTCTCTTTTTG+GGG | - | chr4_2:15113407-15113426 | Msa0591030:intron | 25.0% |
| !! | GCATTTTCTTCTTTGTTAAA+AGG | + | chr4_2:15113535-15113554 | None:intergenic | 25.0% |
| ! | TAACAGTATAACACTTAACA+TGG | - | chr4_2:15113555-15113574 | Msa0591030:intron | 25.0% |
| !!! | TCTTTAATTTCTCTTTTCCT+AGG | - | chr4_2:15114235-15114254 | Msa0591030:intron | 25.0% |
| !!! | CTTTAATTTCTCTTTTCCTA+GGG | - | chr4_2:15114236-15114255 | Msa0591030:intron | 25.0% |
| ! | AATACTTACTATTTCCATAC+TGG | + | chr4_2:15114433-15114452 | None:intergenic | 25.0% |
| !!! | TTTTATTTGCTTGGTTTTGA+AGG | - | chr4_2:15114532-15114551 | Msa0591030:intron | 25.0% |
| !! | AAGTTCATTAGCTTATAGAA+AGG | + | chr4_2:15114619-15114638 | None:intergenic | 25.0% |
| !!! | AAGCTTGTTGAAATAAGTTT+AGG | - | chr4_2:15114665-15114684 | Msa0591030:intron | 25.0% |
| ! | AACAATGATATATTCCTGTT+TGG | + | chr4_2:15114721-15114740 | None:intergenic | 25.0% |
| ! | ATTAGAAATGAGATGCAAAA+TGG | + | chr4_2:15114955-15114974 | None:intergenic | 25.0% |
| ! | TCTCATTTCTAATACTTGTT+TGG | - | chr4_2:15114962-15114981 | Msa0591030:intron | 25.0% |
| ! | TAAATTCATTTGTAAGACCA+TGG | + | chr4_2:15115242-15115261 | None:intergenic | 25.0% |
| !! | TAGTATTCTTCTATCTGTTT+TGG | - | chr4_2:15115273-15115292 | Msa0591030:five_prime_UTR | 25.0% |
| !!! | TTTTGTGTTTTGTTTCAGCA+AGG | - | chr4_2:15108749-15108768 | Msa0591030:three_prime_UTR | 30.0% |
| !!! | TTTGTGTTTTGTTTCAGCAA+GGG | - | chr4_2:15108750-15108769 | Msa0591030:three_prime_UTR | 30.0% |
| ! | TTTCGATTTTCATACATCCT+GGG | + | chr4_2:15108835-15108854 | None:intergenic | 30.0% |
| !!! | TTGGGTTTTTTGTTAAATGC+TGG | - | chr4_2:15108904-15108923 | Msa0591030:intron | 30.0% |
| TTTATGAGATTTGTAACGTG+TGG | - | chr4_2:15109007-15109026 | Msa0591030:intron | 30.0% | |
| CTAATGCAAGCTTATACTTA+GGG | + | chr4_2:15109171-15109190 | None:intergenic | 30.0% | |
| ! | TAAGCTTTATGATACTCTCA+GGG | + | chr4_2:15109328-15109347 | None:intergenic | 30.0% |
| ! | ATAAGCTTTATGATACTCTC+AGG | + | chr4_2:15109329-15109348 | None:intergenic | 30.0% |
| ATCATAAAGCTTATGTCAGT+AGG | - | chr4_2:15109335-15109354 | Msa0591030:intron | 30.0% | |
| TCATAAAGCTTATGTCAGTA+GGG | - | chr4_2:15109336-15109355 | Msa0591030:intron | 30.0% | |
| ATATAAGCCAATTCAAACAG+TGG | - | chr4_2:15109365-15109384 | Msa0591030:intron | 30.0% | |
| AAAAAGTCCACTGTTTGAAT+TGG | + | chr4_2:15109375-15109394 | None:intergenic | 30.0% | |
| !! | TTCTTTGAAACTAGAGAGTA+AGG | - | chr4_2:15109577-15109596 | Msa0591030:CDS | 30.0% |
| !! | TCTTTGAAACTAGAGAGTAA+GGG | - | chr4_2:15109578-15109597 | Msa0591030:CDS | 30.0% |
| !! | TTCTTTGAAACTAGAGAGTA+AGG | - | chr4_2:15109577-15109596 | Msa0591030:CDS | 30.0% |
| !! | TCTTTGAAACTAGAGAGTAA+GGG | - | chr4_2:15109578-15109597 | Msa0591030:CDS | 30.0% |
| GATTGGGATGAAAATCTAAA+AGG | + | chr4_2:15109986-15110005 | None:intergenic | 30.0% | |
| GAAAACAATAGAACTGTGTT+TGG | - | chr4_2:15110100-15110119 | Msa0591030:intron | 30.0% | |
| !! | ATGCAGTGTTGTTTACTTTA+TGG | - | chr4_2:15110430-15110449 | Msa0591030:intron | 30.0% |
| !! | TGCAGTGTTGTTTACTTTAT+GGG | - | chr4_2:15110431-15110450 | Msa0591030:intron | 30.0% |
| AAAGGGCTCAGAAAAATAAT+GGG | + | chr4_2:15110522-15110541 | None:intergenic | 30.0% | |
| AAAAGGGCTCAGAAAAATAA+TGG | + | chr4_2:15110523-15110542 | None:intergenic | 30.0% | |
| !!! | GATGAAAATTTGGTTTTCGA+TGG | - | chr4_2:15110686-15110705 | Msa0591030:intron | 30.0% |
| AATGTACTATGTGCTTACAA+AGG | + | chr4_2:15111039-15111058 | None:intergenic | 30.0% | |
| ACATTCCAAAGATTTAATCG+AGG | - | chr4_2:15111054-15111073 | Msa0591030:intron | 30.0% | |
| ATTCTCCTCGATTAAATCTT+TGG | + | chr4_2:15111062-15111081 | None:intergenic | 30.0% | |
| !! | ACTTCTATTTCTGTAAACAC+AGG | + | chr4_2:15111127-15111146 | None:intergenic | 30.0% |
| !! | TGTCTTTTAAAAATACCCCT+GGG | - | chr4_2:15111323-15111342 | Msa0591030:intron | 30.0% |
| AAAAATCAAAACAACACTGG+TGG | + | chr4_2:15111837-15111856 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTGTAACACCCGAT+TGG | - | chr4_2:15111851-15111870 | Msa0591030:intron | 30.0% |
| !!! | TTTTTTTGTAACACCCGATT+GGG | - | chr4_2:15111852-15111871 | Msa0591030:intron | 30.0% |
| ! | TCTATTCCTTTTTATGTCGT+TGG | - | chr4_2:15112028-15112047 | Msa0591030:intron | 30.0% |
| !! | TGTCTTTTAAAAAAGTCCCT+GGG | + | chr4_2:15112851-15112870 | None:intergenic | 30.0% |
| !!! | GCCTTTTTTTTATCTACATG+TGG | - | chr4_2:15112963-15112982 | Msa0591030:intron | 30.0% |
| !! | TAAAAAAAGCATCAGAGTCA+TGG | + | chr4_2:15113092-15113111 | None:intergenic | 30.0% |
| ! | ACTCATATTTCTCTTTTTGG+GGG | - | chr4_2:15113408-15113427 | Msa0591030:intron | 30.0% |
| GTTCAGTTTGATACTTTGAT+TGG | - | chr4_2:15113438-15113457 | Msa0591030:intron | 30.0% | |
| CATTAAAAAAGGTCTGCAAT+TGG | - | chr4_2:15113590-15113609 | Msa0591030:intron | 30.0% | |
| ! | CCTAGTTAATCTTTTAGATC+CGG | + | chr4_2:15113698-15113717 | None:intergenic | 30.0% |
| GTGTTTACAGATCATAAAAG+TGG | + | chr4_2:15113907-15113926 | None:intergenic | 30.0% | |
| ! | CTTTTATGATCTGTAAACAC+TGG | - | chr4_2:15113907-15113926 | Msa0591030:intron | 30.0% |
| AGAATAACACCAATTTGAGA+TGG | + | chr4_2:15114054-15114073 | None:intergenic | 30.0% | |
| !! | TTAGGCTTGATTAATTTGTG+AGG | - | chr4_2:15114498-15114517 | Msa0591030:intron | 30.0% |
| ! | AGTGCTTGTAAGCTATATTT+TGG | - | chr4_2:15114642-15114661 | Msa0591030:intron | 30.0% |
| !! | TATTTTAGGTAGATCCAAAC+AGG | - | chr4_2:15114704-15114723 | Msa0591030:intron | 30.0% |
| GGTTGTTTAAACTTATCTCA+TGG | + | chr4_2:15114746-15114765 | None:intergenic | 30.0% | |
| AAATGAAGTAACATGTTGCA+AGG | + | chr4_2:15114868-15114887 | None:intergenic | 30.0% | |
| AAAATGGCAATTCCTTAATC+AGG | + | chr4_2:15114939-15114958 | None:intergenic | 30.0% | |
| !!! | TGTGATGTTAGTTTTGATGA+TGG | - | chr4_2:15115156-15115175 | Msa0591030:intron | 30.0% |
| !! | GTTTTGGTGAAAATTTTGTC+CGG | - | chr4_2:15115289-15115308 | Msa0591030:five_prime_UTR | 30.0% |
| GAGAAGAAGAAGAAGAAGAA+AGG | + | chr4_2:15108617-15108636 | None:intergenic | 35.0% | |
| TTCTCCTCAATCATTCATCA+TGG | - | chr4_2:15108632-15108651 | Msa0591030:three_prime_UTR | 35.0% | |
| TCTCCTCAATCATTCATCAT+GGG | - | chr4_2:15108633-15108652 | Msa0591030:three_prime_UTR | 35.0% | |
| ! | GTTTCGATTTTCATACATCC+TGG | + | chr4_2:15108836-15108855 | None:intergenic | 35.0% |
| GCTAATGCAAGCTTATACTT+AGG | + | chr4_2:15109172-15109191 | None:intergenic | 35.0% | |
| CTGAATAAGCCAATTCAAAC+AGG | - | chr4_2:15109942-15109961 | Msa0591030:intron | 35.0% | |
| GCTAACTCTAGCAAAAACAT+TGG | - | chr4_2:15110126-15110145 | Msa0591030:intron | 35.0% | |
| !! | TTGTCGGGTGTTGTTTAAAT+TGG | - | chr4_2:15110619-15110638 | Msa0591030:intron | 35.0% |
| !! | TGTCGGGTGTTGTTTAAATT+GGG | - | chr4_2:15110620-15110639 | Msa0591030:intron | 35.0% |
| AATTGGGGTACAAAAAGATG+TGG | - | chr4_2:15110636-15110655 | Msa0591030:intron | 35.0% | |
| ATTGGGGTACAAAAAGATGT+GGG | - | chr4_2:15110637-15110656 | Msa0591030:intron | 35.0% | |
| GCTATAAACTCATCCTTGAA+AGG | - | chr4_2:15110961-15110980 | Msa0591030:intron | 35.0% | |
| ! | ACATAAAGCACTTCCTTTCA+AGG | + | chr4_2:15110977-15110996 | None:intergenic | 35.0% |
| ATCGAGATGCAGAAATAGAA+GGG | + | chr4_2:15111155-15111174 | None:intergenic | 35.0% | |
| !! | CTGTCTTTTAAAAATACCCC+TGG | - | chr4_2:15111322-15111341 | Msa0591030:intron | 35.0% |
| ! | TACACTTTGTGTGGATTAAC+TGG | - | chr4_2:15111881-15111900 | Msa0591030:intron | 35.0% |
| ! | ACACTTTGTGTGGATTAACT+GGG | - | chr4_2:15111882-15111901 | Msa0591030:intron | 35.0% |
| AAGAGTCCAACGACATAAAA+AGG | + | chr4_2:15112037-15112056 | None:intergenic | 35.0% | |
| ! | TTTTTATGTCGTTGGACTCT+TGG | - | chr4_2:15112036-15112055 | Msa0591030:intron | 35.0% |
| !! | CTGTCTTTTAAAAAAGTCCC+TGG | + | chr4_2:15112852-15112871 | None:intergenic | 35.0% |
| !! | ATCAGAGTCATGGAAGTATT+AGG | + | chr4_2:15113299-15113318 | None:intergenic | 35.0% |
| AAAAAGTAGCATCAGAGTCA+TGG | + | chr4_2:15113309-15113328 | None:intergenic | 35.0% | |
| TGCTTTCATACTCGAACTAT+TGG | + | chr4_2:15113387-15113406 | None:intergenic | 35.0% | |
| GATAATAGTCGATGAACAAC+CGG | - | chr4_2:15113676-15113695 | Msa0591030:intron | 35.0% | |
| CCGGATCTAAAAGATTAACT+AGG | - | chr4_2:15113695-15113714 | Msa0591030:intron | 35.0% | |
| ATCATCGCATCAAACATGAT+TGG | + | chr4_2:15113740-15113759 | None:intergenic | 35.0% | |
| CTGAATTATTGTTGTGATGC+AGG | + | chr4_2:15113782-15113801 | None:intergenic | 35.0% | |
| ! | TATGCGCAAAATCTTGTTTC+CGG | + | chr4_2:15114115-15114134 | None:intergenic | 35.0% |
| ! | CAAGATTTTGCGCATATTGA+AGG | - | chr4_2:15114119-15114138 | Msa0591030:intron | 35.0% |
| TACAGATCTTCAGGAATTTC+AGG | + | chr4_2:15114268-15114287 | None:intergenic | 35.0% | |
| !! | TGTCTCAATTAGGAAGCATT+TGG | - | chr4_2:15114306-15114325 | Msa0591030:intron | 35.0% |
| ! | CTCCAAATTCAGGCTAATTT+TGG | - | chr4_2:15114351-15114370 | Msa0591030:intron | 35.0% |
| ! | GACCAAAATTAGCCTGAATT+TGG | + | chr4_2:15114356-15114375 | None:intergenic | 35.0% |
| TCTTCTTATAGTAACGAGCA+AGG | + | chr4_2:15114396-15114415 | None:intergenic | 35.0% | |
| ACTTACTATTTCCATACTGG+TGG | + | chr4_2:15114430-15114449 | None:intergenic | 35.0% | |
| ! | TTTGAAGGCCTGAATTTTCT+TGG | - | chr4_2:15114547-15114566 | Msa0591030:intron | 35.0% |
| CTTAATAATGCATAGAGCAG+AGG | + | chr4_2:15114767-15114786 | None:intergenic | 35.0% | |
| GTGTACATGCCTGTTTGAAT+TGG | + | chr4_2:15109954-15109973 | None:intergenic | 40.0% | |
| CTGTCAAATGGATGCTATAG+CGG | - | chr4_2:15110336-15110355 | Msa0591030:intron | 40.0% | |
| TCAGCACTGTAATATCAGAG+TGG | + | chr4_2:15110486-15110505 | None:intergenic | 40.0% | |
| !! | GTCGGGTGTTGTTTAAATTG+GGG | - | chr4_2:15110621-15110640 | Msa0591030:intron | 40.0% |
| TTGGGGTACAAAAAGATGTG+GGG | - | chr4_2:15110638-15110657 | Msa0591030:intron | 40.0% | |
| AAGTACAGCATTACAGCTTC+TGG | - | chr4_2:15110662-15110681 | Msa0591030:intron | 40.0% | |
| AGTACAGCATTACAGCTTCT+GGG | - | chr4_2:15110663-15110682 | Msa0591030:intron | 40.0% | |
| ! | AGCTTCTGGGGATGAAAATT+TGG | - | chr4_2:15110676-15110695 | Msa0591030:intron | 40.0% |
| TCGAGATGCAGAAATAGAAG+GGG | + | chr4_2:15111154-15111173 | None:intergenic | 40.0% | |
| GATCGAGATGCAGAAATAGA+AGG | + | chr4_2:15111156-15111175 | None:intergenic | 40.0% | |
| TACATTGGTCCCTGCAAATA+TGG | - | chr4_2:15111239-15111258 | Msa0591030:intron | 40.0% | |
| ! | AATATGGCCCAGTTGAGTTT+TGG | - | chr4_2:15111255-15111274 | Msa0591030:intron | 40.0% |
| ACAAGGACCAAAACTCAACT+GGG | + | chr4_2:15112909-15112928 | None:intergenic | 40.0% | |
| TACAAGGACCAAAACTCAAC+TGG | + | chr4_2:15112908-15112927 | None:intergenic | 40.0% | |
| ! | ACATGCTGACTGTGCATAAT+TGG | - | chr4_2:15111387-15111406 | Msa0591030:intron | 40.0% |
| AAAGTGTATGCCAACCCAAT+CGG | + | chr4_2:15111869-15111888 | None:intergenic | 40.0% | |
| GCAAGACACTACAACTCTAT+TGG | - | chr4_2:15111998-15112017 | Msa0591030:intron | 40.0% | |
| TACAAGGACCAAAACTCAAC+TGG | - | chr4_2:15112908-15112927 | Msa0591030:intron | 40.0% | |
| ACAAGGACCAAAACTCAACT+GGG | - | chr4_2:15112909-15112928 | Msa0591030:intron | 40.0% | |
| ! | AATATGGCCCAGTTGAGTTT+TGG | + | chr4_2:15111255-15111274 | None:intergenic | 40.0% |
| TACATTGGTCCCTGCAAATA+TGG | + | chr4_2:15111239-15111258 | None:intergenic | 40.0% | |
| ! | GTGATGCAGGACAACATTTT+CGG | + | chr4_2:15113769-15113788 | None:intergenic | 40.0% |
| CTGATGTTCATGAATTGCAC+AGG | - | chr4_2:15113987-15114006 | Msa0591030:intron | 40.0% | |
| TTTCTTGGCAAACTTGCAGA+TGG | + | chr4_2:15114022-15114041 | None:intergenic | 40.0% | |
| ATCTGCAAGTTTGCCAAGAA+AGG | - | chr4_2:15114021-15114040 | Msa0591030:intron | 40.0% | |
| AGATGGAGTTAGACCTTTCT+TGG | + | chr4_2:15114037-15114056 | None:intergenic | 40.0% | |
| GGTCTAACTCCATCTCAAAT+TGG | - | chr4_2:15114042-15114061 | Msa0591030:intron | 40.0% | |
| CTTAACCTGAGCAATTCCAT+GGG | + | chr4_2:15114085-15114104 | None:intergenic | 40.0% | |
| ATCAGGTGATACAGATCTTC+AGG | + | chr4_2:15114277-15114296 | None:intergenic | 40.0% | |
| TCTGTATCACCTGATCAAGA+AGG | - | chr4_2:15114282-15114301 | Msa0591030:intron | 40.0% | |
| TCAAGAAGGCTGTCTCAATT+AGG | - | chr4_2:15114296-15114315 | Msa0591030:intron | 40.0% | |
| !! | CAATTAGGAAGCATTTGGAG+AGG | - | chr4_2:15114311-15114330 | Msa0591030:intron | 40.0% |
| !! | TTGTTGATTCGCTGCAATAG+TGG | + | chr4_2:15114993-15115012 | None:intergenic | 40.0% |
| ! | ACTCTTGTTGCTTGAAGAGA+TGG | - | chr4_2:15115021-15115040 | Msa0591030:intron | 40.0% |
| ! | TTGTTGCTTGAAGAGATGGT+CGG | - | chr4_2:15115025-15115044 | Msa0591030:intron | 40.0% |
| CTTTGTGCCAGTGACAAATG+AGG | + | chr4_2:15108563-15108582 | None:intergenic | 45.0% | |
| CGACCCATGATGAATGATTG+AGG | + | chr4_2:15108639-15108658 | None:intergenic | 45.0% | |
| CTTGCTGGTGTTCTCTTGTA+AGG | + | chr4_2:15108795-15108814 | None:intergenic | 45.0% | |
| ACAAGAGAACACCAGCAAGT+TGG | - | chr4_2:15108796-15108815 | Msa0591030:three_prime_UTR | 45.0% | |
| CTAGAGAGTAAGGGTCTCTT+TGG | - | chr4_2:15109587-15109606 | Msa0591030:CDS | 45.0% | |
| CTAGAGAGTAAGGGTCTCTT+TGG | - | chr4_2:15109587-15109606 | Msa0591030:CDS | 45.0% | |
| AAACAGGCATGTACACGCTA+AGG | - | chr4_2:15109958-15109977 | Msa0591030:intron | 45.0% | |
| AACAGGCATGTACACGCTAA+GGG | - | chr4_2:15109959-15109978 | Msa0591030:intron | 45.0% | |
| ATTGGCGTGGTCATGTGAAT+TGG | - | chr4_2:15110294-15110313 | Msa0591030:intron | 45.0% | |
| TCCTGATCAGTGCTGTCAAA+TGG | - | chr4_2:15110324-15110343 | Msa0591030:intron | 45.0% | |
| !! | TCCATTTGACAGCACTGATC+AGG | + | chr4_2:15110328-15110347 | None:intergenic | 45.0% |
| GTACAGCATTACAGCTTCTG+GGG | - | chr4_2:15110664-15110683 | Msa0591030:intron | 45.0% | |
| AACCATCCATATACCCTGTG+TGG | - | chr4_2:15111086-15111105 | Msa0591030:intron | 45.0% | |
| ! | ATTAACCAGAGTGCCACACA+GGG | + | chr4_2:15111102-15111121 | None:intergenic | 45.0% |
| CGAGATGCAGAAATAGAAGG+GGG | + | chr4_2:15111153-15111172 | None:intergenic | 45.0% | |
| TCAACTGGGCCATATTTGCA+GGG | + | chr4_2:15112923-15112942 | None:intergenic | 45.0% | |
| TTTGTAACACCCGATTGGGT+TGG | - | chr4_2:15111856-15111875 | Msa0591030:intron | 45.0% | |
| AAGTGTATGCCAACCCAATC+GGG | + | chr4_2:15111868-15111887 | None:intergenic | 45.0% | |
| TATGAGCACCTGACATAGAC+TGG | - | chr4_2:15111970-15111989 | Msa0591030:intron | 45.0% | |
| TGCAGATTCCAGTCTATGTC+AGG | + | chr4_2:15111981-15112000 | None:intergenic | 45.0% | |
| TCAACTGGGCCATATTTGCA+GGG | - | chr4_2:15112923-15112942 | Msa0591030:intron | 45.0% | |
| GTTATTCTTCGTGACTCCCA+TGG | - | chr4_2:15114066-15114085 | Msa0591030:intron | 45.0% | |
| CCTTAACCTGAGCAATTCCA+TGG | + | chr4_2:15114086-15114105 | None:intergenic | 45.0% | |
| CCATGGAATTGCTCAGGTTA+AGG | - | chr4_2:15114083-15114102 | Msa0591030:intron | 45.0% | |
| TTGAGACAGCCTTCTTGATC+AGG | + | chr4_2:15114294-15114313 | None:intergenic | 45.0% | |
| AGGACAAGGACTCCAAATTC+AGG | - | chr4_2:15114341-15114360 | Msa0591030:intron | 45.0% | |
| TATAGTAACGAGCAAGGCGA+TGG | + | chr4_2:15114390-15114409 | None:intergenic | 45.0% | |
| CAAAGAAGCTTCCACCAGTA+TGG | - | chr4_2:15114416-15114435 | Msa0591030:intron | 45.0% | |
| ! | TCTTCAAGCAACAAGAGTGC+TGG | + | chr4_2:15115019-15115038 | None:intergenic | 45.0% |
| !!! | TTTTAATAATTAAAAGAAAA+GGG | + | chr4_2:15110539-15110558 | None:intergenic | 5.0% |
| !!! | TTTTTAATAATTAAAAGAAA+AGG | + | chr4_2:15110540-15110559 | None:intergenic | 5.0% |
| !! | AAAAAATAATAAAAAATTTC+CGG | - | chr4_2:15111594-15111613 | Msa0591030:intron | 5.0% |
| !!! | AATTATTTTTTTCTAATATT+TGG | + | chr4_2:15112267-15112286 | None:intergenic | 5.0% |
| !!! | AAATTTAAAATAGAAAAAAA+TGG | + | chr4_2:15112619-15112638 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTCATTAAAAA+AGG | - | chr4_2:15113579-15113598 | Msa0591030:intron | 5.0% |
| ATCATGGGTCGTATGCACAG+TGG | - | chr4_2:15108648-15108667 | Msa0591030:three_prime_UTR | 50.0% | |
| GAGATCTTGAGCCAACTTGC+TGG | + | chr4_2:15108810-15108829 | None:intergenic | 50.0% | |
| TTGGCTCAAGATCTCTACCC+AGG | - | chr4_2:15108815-15108834 | Msa0591030:three_prime_UTR | 50.0% | |
| TGCCACACAGGGTATATGGA+TGG | + | chr4_2:15111091-15111110 | None:intergenic | 50.0% | |
| ! | AGAGTGCCACACAGGGTATA+TGG | + | chr4_2:15111095-15111114 | None:intergenic | 50.0% |
| ATATACCCTGTGTGGCACTC+TGG | - | chr4_2:15111094-15111113 | Msa0591030:intron | 50.0% | |
| ! | CATTAACCAGAGTGCCACAC+AGG | + | chr4_2:15111103-15111122 | None:intergenic | 50.0% |
| CTCAACTGGGCCATATTTGC+AGG | + | chr4_2:15112922-15112941 | None:intergenic | 50.0% | |
| ACTGTGCATAATTGGCCACG+TGG | - | chr4_2:15111395-15111414 | Msa0591030:intron | 50.0% | |
| ! | GGGTTGGCATACACTTTGTG+TGG | - | chr4_2:15111872-15111891 | Msa0591030:intron | 50.0% |
| GACTGTGCATAATTGCCACG+TGG | + | chr4_2:15112780-15112799 | None:intergenic | 50.0% | |
| CTCAACTGGGCCATATTTGC+AGG | - | chr4_2:15112922-15112941 | Msa0591030:intron | 50.0% | |
| TGACTCCCATGGAATTGCTC+AGG | - | chr4_2:15114077-15114096 | Msa0591030:intron | 50.0% | |
| GCTCAGGTTAAGGCTGTAAC+CGG | - | chr4_2:15114093-15114112 | Msa0591030:intron | 50.0% | |
| ! | TTGCGCATATTGAAGGCGCA+TGG | - | chr4_2:15114126-15114145 | Msa0591030:intron | 50.0% |
| GAATTTCAGGAGCAAGCCCT+AGG | + | chr4_2:15114255-15114274 | None:intergenic | 50.0% | |
| !! | GGAAGCATTTGGAGAGGAAC+AGG | - | chr4_2:15114317-15114336 | Msa0591030:intron | 50.0% |
| GCATTTGGAGAGGAACAGGA+AGG | - | chr4_2:15114321-15114340 | Msa0591030:intron | 50.0% | |
| !! | GGCTAATTTTGGTCGAGAGC+AGG | - | chr4_2:15114362-15114381 | Msa0591030:intron | 50.0% |
| ATGGGTCGTATGCACAGTGG+CGG | - | chr4_2:15108651-15108670 | Msa0591030:three_prime_UTR | 55.0% | |
| TGCCACCATGCAGCTTCAGT+GGG | + | chr4_2:15111349-15111368 | None:intergenic | 55.0% | |
| AGCATGTGCCACGTCAGCAT+CGG | + | chr4_2:15112800-15112819 | None:intergenic | 55.0% | |
| AGCATGTGCCACGTCAGCAT+CGG | - | chr4_2:15112800-15112819 | Msa0591030:intron | 55.0% | |
| TGCCACCTAGCAGCTTCAGT+GGG | - | chr4_2:15112825-15112844 | Msa0591030:intron | 55.0% | |
| GGAGAGGAACAGGAAGGACA+AGG | - | chr4_2:15114327-15114346 | Msa0591030:intron | 55.0% | |
| TGGGTCGTATGCACAGTGGC+GGG | - | chr4_2:15108652-15108671 | Msa0591030:three_prime_UTR | 60.0% | |
| ATGCAGCTTCAGTGGGCCCA+GGG | + | chr4_2:15111342-15111361 | None:intergenic | 60.0% | |
| GTGCCACCATGCAGCTTCAG+TGG | + | chr4_2:15111350-15111369 | None:intergenic | 60.0% | |
| ATGCCACGTCAGATGCCACG+TGG | + | chr4_2:15112762-15112781 | None:intergenic | 60.0% | |
| ATGCCACGTCAGATGCCACG+TGG | - | chr4_2:15112762-15112781 | Msa0591030:intron | 60.0% | |
| TTGCCACGTGGCATCTGACG+TGG | + | chr4_2:15112768-15112787 | None:intergenic | 60.0% | |
| GTGCCACCTAGCAGCTTCAG+TGG | - | chr4_2:15112824-15112843 | Msa0591030:intron | 60.0% | |
| TAGCAGCTTCAGTGGGCCCA+GGG | - | chr4_2:15112832-15112851 | Msa0591030:intron | 60.0% | |
| TGCAGCTTCAGTGGGCCCAG+GGG | + | chr4_2:15111341-15111360 | None:intergenic | 65.0% | |
| CATGCAGCTTCAGTGGGCCC+AGG | + | chr4_2:15111343-15111362 | None:intergenic | 65.0% | |
| CTGGGCCCACTGAAGCTGCA+TGG | - | chr4_2:15111341-15111360 | Msa0591030:intron | 65.0% | |
| GGCCCACTGAAGCTGCATGG+TGG | - | chr4_2:15111344-15111363 | Msa0591030:intron | 65.0% | |
| GTGGCACTCCGATGCTGACG+TGG | - | chr4_2:15111363-15111382 | Msa0591030:intron | 65.0% | |
| TGGCCACGTGGCATCTGACG+TGG | - | chr4_2:15111407-15111426 | Msa0591030:intron | 65.0% | |
| GTGGCACTCCGATGCTGACG+TGG | + | chr4_2:15111363-15111382 | None:intergenic | 65.0% | |
| GGCCCACTGAAGCTGCTAGG+TGG | + | chr4_2:15112830-15112849 | None:intergenic | 65.0% | |
| CTGGGCCCACTGAAGCTGCT+AGG | + | chr4_2:15112833-15112852 | None:intergenic | 65.0% | |
| CTAGCAGCTTCAGTGGGCCC+AGG | - | chr4_2:15112831-15112850 | Msa0591030:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 15108560 | 15115337 | 15108560 | ID=Msa0591030;Name=Msa0591030 |
| chr4_2 | mRNA | 15108560 | 15115337 | 15108560 | ID=Msa0591030-mRNA-1;Parent=Msa0591030;Name=Msa0591030-mRNA-1;_AED=0.06;_eAED=0.06;_QI=91|1|1|1|1|1|5|302|151 |
| chr4_2 | exon | 15108560 | 15108895 | 15108560 | ID=Msa0591030-mRNA-1:exon:4322;Parent=Msa0591030-mRNA-1 |
| chr4_2 | exon | 15109454 | 15109640 | 15109454 | ID=Msa0591030-mRNA-1:exon:4321;Parent=Msa0591030-mRNA-1 |
| chr4_2 | exon | 15109750 | 15109888 | 15109750 | ID=Msa0591030-mRNA-1:exon:4320;Parent=Msa0591030-mRNA-1 |
| chr4_2 | exon | 15115058 | 15115130 | 15115058 | ID=Msa0591030-mRNA-1:exon:4319;Parent=Msa0591030-mRNA-1 |
| chr4_2 | exon | 15115224 | 15115337 | 15115224 | ID=Msa0591030-mRNA-1:exon:4318;Parent=Msa0591030-mRNA-1 |
| chr4_2 | five_prime_UTR | 15115247 | 15115337 | 15115247 | ID=Msa0591030-mRNA-1:five_prime_utr;Parent=Msa0591030-mRNA-1 |
| chr4_2 | CDS | 15115224 | 15115246 | 15115224 | ID=Msa0591030-mRNA-1:cds;Parent=Msa0591030-mRNA-1 |
| chr4_2 | CDS | 15115058 | 15115130 | 15115058 | ID=Msa0591030-mRNA-1:cds;Parent=Msa0591030-mRNA-1 |
| chr4_2 | CDS | 15109750 | 15109888 | 15109750 | ID=Msa0591030-mRNA-1:cds;Parent=Msa0591030-mRNA-1 |
| chr4_2 | CDS | 15109454 | 15109640 | 15109454 | ID=Msa0591030-mRNA-1:cds;Parent=Msa0591030-mRNA-1 |
| chr4_2 | CDS | 15108862 | 15108895 | 15108862 | ID=Msa0591030-mRNA-1:cds;Parent=Msa0591030-mRNA-1 |
| chr4_2 | three_prime_UTR | 15108560 | 15108861 | 15108560 | ID=Msa0591030-mRNA-1:three_prime_utr;Parent=Msa0591030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
