Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601820 | XP_024636166.1 | 99.140 | 349 | 3 | 0 | 1 | 349 | 1 | 349 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601820 | sp|F4IHS9|UXT1_ARATH | 75.645 | 349 | 78 | 3 | 1 | 349 | 1 | 342 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040660 | Msa0601820 | 0.816224 | 6.175884e-52 | -8.615850e-47 |
| Msa0184680 | Msa0601820 | 0.816504 | 5.346223e-52 | -8.615850e-47 |
| Msa0601820 | Msa0688820 | 0.826087 | 3.288070e-54 | -8.615850e-47 |
| Msa0601820 | Msa0968350 | 0.875070 | 4.114973e-68 | -8.615850e-47 |
| Msa0601820 | Msa1037550 | 0.809916 | 1.493279e-50 | -8.615850e-47 |
| Msa0601820 | Msa1078930 | 0.868970 | 4.394227e-66 | -8.615850e-47 |
| Msa0601820 | Msa1123930 | 0.879584 | 1.105604e-69 | -8.615850e-47 |
| Msa0601820 | Msa1169230 | 0.842821 | 2.046374e-58 | -8.615850e-47 |
| Msa0601820 | Msa1426070 | 0.872956 | 2.134014e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601820 | MtrunA17_Chr4g0028931 | 99.140 | 349 | 3 | 0 | 1 | 349 | 1 | 349 | 0.0 | 697 |
| Msa0601820 | MtrunA17_Chr2g0326791 | 83.621 | 348 | 55 | 2 | 1 | 347 | 1 | 347 | 0.0 | 584 |
| Msa0601820 | MtrunA17_Chr6g0467391 | 84.444 | 315 | 48 | 1 | 1 | 314 | 1 | 315 | 0.0 | 534 |
| Msa0601820 | MtrunA17_Chr6g0467371 | 84.444 | 315 | 48 | 1 | 1 | 314 | 1 | 315 | 0.0 | 534 |
| Msa0601820 | MtrunA17_Chr3g0128951 | 64.943 | 348 | 119 | 2 | 1 | 346 | 1 | 347 | 2.35e-153 | 434 |
| Msa0601820 | MtrunA17_Chr3g0128961 | 61.823 | 351 | 111 | 2 | 1 | 329 | 1 | 350 | 5.25e-141 | 404 |
| Msa0601820 | MtrunA17_Chr1g0157501 | 37.267 | 322 | 192 | 2 | 13 | 324 | 14 | 335 | 1.15e-57 | 190 |
| Msa0601820 | MtrunA17_Chr8g0383381 | 34.954 | 329 | 206 | 5 | 12 | 334 | 15 | 341 | 3.35e-56 | 186 |
| Msa0601820 | MtrunA17_Chr3g0129401 | 36.333 | 300 | 189 | 2 | 6 | 304 | 10 | 308 | 6.21e-55 | 183 |
| Msa0601820 | MtrunA17_Chr5g0393381 | 39.203 | 301 | 178 | 3 | 6 | 302 | 9 | 308 | 2.37e-54 | 182 |
| Msa0601820 | MtrunA17_Chr1g0201531 | 36.860 | 293 | 184 | 1 | 13 | 304 | 16 | 308 | 9.11e-53 | 177 |
| Msa0601820 | MtrunA17_Chr2g0298931 | 29.448 | 326 | 215 | 4 | 22 | 343 | 66 | 380 | 2.91e-35 | 132 |
| Msa0601820 | MtrunA17_Chr5g0446851 | 29.530 | 298 | 202 | 2 | 10 | 303 | 55 | 348 | 5.27e-32 | 123 |
| Msa0601820 | MtrunA17_Chr3g0114581 | 25.796 | 314 | 222 | 5 | 22 | 328 | 26 | 335 | 1.52e-22 | 96.7 |
| Msa0601820 | MtrunA17_Chr1g0160071 | 25.155 | 322 | 230 | 6 | 20 | 333 | 23 | 341 | 1.90e-22 | 96.7 |
| Msa0601820 | MtrunA17_Chr2g0307091 | 26.934 | 349 | 210 | 16 | 22 | 348 | 25 | 350 | 3.79e-21 | 92.8 |
| Msa0601820 | MtrunA17_Chr3g0137921 | 23.706 | 367 | 241 | 11 | 1 | 346 | 1 | 349 | 1.62e-17 | 82.4 |
| Msa0601820 | MtrunA17_Chr7g0270591 | 25.714 | 350 | 232 | 10 | 4 | 340 | 8 | 342 | 7.17e-17 | 80.9 |
| Msa0601820 | MtrunA17_Chr1g0149401 | 24.919 | 309 | 209 | 8 | 7 | 296 | 35 | 339 | 1.20e-15 | 77.0 |
| Msa0601820 | MtrunA17_Chr4g0069261 | 25.833 | 360 | 225 | 12 | 1 | 346 | 1 | 332 | 1.60e-13 | 70.9 |
| Msa0601820 | MtrunA17_Chr3g0112981 | 27.187 | 320 | 195 | 11 | 5 | 304 | 19 | 320 | 8.04e-12 | 65.5 |
| Msa0601820 | MtrunA17_Chr5g0436341 | 26.266 | 316 | 209 | 8 | 1 | 304 | 1 | 304 | 1.33e-11 | 64.7 |
| Msa0601820 | MtrunA17_Chr4g0063601 | 24.189 | 339 | 197 | 15 | 22 | 346 | 25 | 317 | 5.37e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601820 | AT2G28315.1 | 75.645 | 349 | 78 | 3 | 1 | 349 | 1 | 342 | 0.0 | 521 |
| Msa0601820 | AT2G28315.2 | 82.237 | 304 | 54 | 0 | 1 | 304 | 1 | 304 | 0.0 | 511 |
| Msa0601820 | AT1G06890.2 | 65.070 | 355 | 114 | 3 | 1 | 346 | 1 | 354 | 2.26e-152 | 433 |
| Msa0601820 | AT1G06890.1 | 65.070 | 355 | 114 | 3 | 1 | 346 | 1 | 354 | 2.26e-152 | 433 |
| Msa0601820 | AT1G06890.3 | 68.085 | 329 | 104 | 1 | 1 | 329 | 1 | 328 | 1.87e-151 | 430 |
| Msa0601820 | AT1G06890.4 | 68.085 | 329 | 104 | 1 | 1 | 329 | 1 | 328 | 1.91e-151 | 430 |
| Msa0601820 | AT2G30460.1 | 64.873 | 353 | 114 | 3 | 1 | 346 | 1 | 350 | 1.28e-150 | 428 |
| Msa0601820 | AT2G30460.2 | 64.873 | 353 | 114 | 3 | 1 | 346 | 1 | 350 | 1.28e-150 | 428 |
| Msa0601820 | AT2G30460.3 | 61.677 | 334 | 114 | 5 | 21 | 346 | 2 | 329 | 1.09e-138 | 397 |
| Msa0601820 | AT2G30460.6 | 61.677 | 334 | 114 | 5 | 21 | 346 | 2 | 329 | 1.09e-138 | 397 |
| Msa0601820 | AT2G30460.5 | 61.677 | 334 | 114 | 5 | 21 | 346 | 2 | 329 | 1.09e-138 | 397 |
| Msa0601820 | AT2G30460.4 | 70.776 | 219 | 64 | 0 | 1 | 219 | 1 | 219 | 1.35e-98 | 295 |
| Msa0601820 | AT5G42420.1 | 38.907 | 311 | 187 | 2 | 5 | 313 | 9 | 318 | 1.86e-62 | 203 |
| Msa0601820 | AT1G21070.1 | 35.714 | 336 | 214 | 1 | 3 | 336 | 7 | 342 | 4.62e-61 | 199 |
| Msa0601820 | AT4G09810.1 | 37.255 | 306 | 190 | 2 | 13 | 316 | 16 | 321 | 1.18e-59 | 195 |
| Msa0601820 | AT1G76670.2 | 34.615 | 338 | 219 | 1 | 6 | 341 | 9 | 346 | 4.91e-58 | 191 |
| Msa0601820 | AT1G76670.1 | 34.615 | 338 | 219 | 1 | 6 | 341 | 9 | 346 | 4.91e-58 | 191 |
| Msa0601820 | AT4G39390.3 | 35.144 | 313 | 201 | 2 | 12 | 322 | 16 | 328 | 5.12e-58 | 191 |
| Msa0601820 | AT1G34020.2 | 35.404 | 322 | 199 | 3 | 18 | 337 | 21 | 335 | 5.29e-58 | 191 |
| Msa0601820 | AT1G34020.1 | 35.404 | 322 | 199 | 3 | 18 | 337 | 21 | 335 | 5.29e-58 | 191 |
| Msa0601820 | AT1G34020.3 | 35.404 | 322 | 199 | 3 | 18 | 337 | 21 | 335 | 5.29e-58 | 191 |
| Msa0601820 | AT4G39390.1 | 35.144 | 313 | 201 | 2 | 12 | 322 | 20 | 332 | 5.95e-58 | 191 |
| Msa0601820 | AT4G39390.2 | 35.144 | 313 | 201 | 2 | 12 | 322 | 20 | 332 | 5.95e-58 | 191 |
| Msa0601820 | AT4G09810.2 | 39.367 | 221 | 133 | 1 | 85 | 304 | 31 | 251 | 6.92e-49 | 166 |
| Msa0601820 | AT4G09810.3 | 37.681 | 207 | 129 | 0 | 13 | 219 | 16 | 222 | 1.04e-39 | 140 |
| Msa0601820 | AT5G57100.1 | 31.034 | 290 | 192 | 2 | 14 | 299 | 67 | 352 | 4.58e-38 | 140 |
| Msa0601820 | AT5G55950.1 | 29.856 | 278 | 187 | 2 | 22 | 295 | 68 | 341 | 8.87e-34 | 129 |
| Msa0601820 | AT5G55950.4 | 29.856 | 278 | 187 | 2 | 22 | 295 | 8 | 281 | 1.29e-33 | 127 |
| Msa0601820 | AT5G55950.3 | 29.588 | 267 | 180 | 2 | 33 | 295 | 1 | 263 | 1.27e-30 | 119 |
| Msa0601820 | AT5G42420.2 | 31.090 | 312 | 143 | 10 | 5 | 313 | 9 | 251 | 1.74e-28 | 112 |
| Msa0601820 | AT5G57100.2 | 30.000 | 240 | 160 | 2 | 10 | 245 | 63 | 298 | 1.57e-27 | 110 |
| Msa0601820 | AT5G57100.3 | 32.308 | 195 | 128 | 1 | 10 | 200 | 63 | 257 | 3.56e-25 | 103 |
| Msa0601820 | AT5G57100.4 | 30.198 | 202 | 137 | 1 | 98 | 299 | 40 | 237 | 2.57e-23 | 98.2 |
| Msa0601820 | AT5G55950.2 | 28.333 | 240 | 164 | 2 | 10 | 245 | 56 | 291 | 3.21e-23 | 98.6 |
| Msa0601820 | AT4G32390.1 | 25.341 | 367 | 236 | 12 | 1 | 346 | 1 | 350 | 7.31e-20 | 89.7 |
| Msa0601820 | AT1G21870.1 | 26.335 | 281 | 198 | 4 | 22 | 295 | 26 | 304 | 1.72e-19 | 88.6 |
| Msa0601820 | AT5G25400.1 | 25.519 | 337 | 219 | 12 | 22 | 345 | 29 | 346 | 3.03e-19 | 87.8 |
| Msa0601820 | AT1G77610.1 | 25.623 | 281 | 200 | 4 | 22 | 295 | 20 | 298 | 1.09e-18 | 86.3 |
| Msa0601820 | AT2G25520.1 | 25.479 | 365 | 233 | 12 | 1 | 344 | 1 | 347 | 1.47e-18 | 85.9 |
| Msa0601820 | AT5G11230.1 | 24.852 | 338 | 222 | 12 | 22 | 345 | 29 | 348 | 4.38e-17 | 81.6 |
| Msa0601820 | AT4G32272.1 | 26.115 | 314 | 202 | 9 | 5 | 296 | 34 | 339 | 1.05e-14 | 74.7 |
| Msa0601820 | AT4G32272.2 | 26.073 | 303 | 195 | 8 | 16 | 296 | 59 | 354 | 3.42e-14 | 73.2 |
| Msa0601820 | AT5G05820.1 | 26.667 | 300 | 192 | 8 | 20 | 304 | 20 | 306 | 2.20e-11 | 64.3 |
| Msa0601820 | AT3G11320.1 | 26.403 | 303 | 189 | 9 | 20 | 304 | 20 | 306 | 4.71e-11 | 63.5 |
| Msa0601820 | AT3G17430.2 | 24.118 | 340 | 214 | 13 | 22 | 346 | 23 | 333 | 5.74e-11 | 63.5 |
| Msa0601820 | AT3G17430.1 | 24.118 | 340 | 214 | 13 | 22 | 346 | 23 | 333 | 5.74e-11 | 63.5 |
Find 73 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACTGAAAGGAACATTAT+TGG | 0.175320 | 4_2:+44876836 | Msa0601820:CDS |
| TTGGACTTGAGAAGAATTTC+AGG | 0.194385 | 4_2:+44874358 | Msa0601820:five_prime_UTR |
| TTTAAGATCTTTCATAATTT+GGG | 0.199615 | 4_2:+44877169 | Msa0601820:three_prime_UTR |
| TCTCTATTCTTCTTACTTGT+TGG | 0.215453 | 4_2:+44875864 | Msa0601820:CDS |
| CTCAAGACTTGTCTTGTTCT+AGG | 0.234530 | 4_2:+44876785 | Msa0601820:CDS |
| ACTTGTCTTGTTCTAGGATT+TGG | 0.249840 | 4_2:+44876791 | Msa0601820:CDS |
| TTCATTGAGTTTATGTTTGT+TGG | 0.255758 | 4_2:-44874242 | None:intergenic |
| ATGATATGACAAAATATAAT+TGG | 0.267975 | 4_2:-44877300 | None:intergenic |
| GTTCTCTTGGGTGCAGAAAT+AGG | 0.270662 | 4_2:-44876894 | None:intergenic |
| TTTAGCACCTTTCTAGTAAT+AGG | 0.278992 | 4_2:+44876725 | Msa0601820:CDS |
| CAATTCCATTGGATTCTATC+AGG | 0.280510 | 4_2:+44875193 | Msa0601820:CDS |
| TCTTCTCTGTTTCTCTCTCT+TGG | 0.280817 | 4_2:+44874339 | Msa0601820:five_prime_UTR |
| TAGACTATAATGCATCTAAT+TGG | 0.296692 | 4_2:+44874062 | Msa0601820:five_prime_UTR |
| TGAGTTTATGTTTGTTGGTT+TGG | 0.307355 | 4_2:-44874237 | None:intergenic |
| GTTACCTGAACTGCTTCTTT+AGG | 0.317401 | 4_2:-44875722 | None:intergenic |
| ACATGGACATTAAGCTTTCA+TGG | 0.323447 | 4_2:-44874159 | None:intergenic |
| GAAACCAAGATTGCTCATTA+AGG | 0.338212 | 4_2:-44874901 | None:intergenic |
| ACAATACTCACCAAGATTAG+AGG | 0.339586 | 4_2:-44876395 | None:intergenic |
| ACTTACAAGTTGGCATTTGA+TGG | 0.352879 | 4_2:+44875037 | Msa0601820:CDS |
| ATAGAGAGAGTTTAATATTC+CGG | 0.359278 | 4_2:-44875848 | None:intergenic |
| AAAGCCTTAATGAGCAATCT+TGG | 0.364932 | 4_2:+44874897 | Msa0601820:CDS |
| CCCAACACTTGATATGTTAC+TGG | 0.372610 | 4_2:-44876758 | None:intergenic |
| TTCTTCTTACTTGTTGGAGT+TGG | 0.376842 | 4_2:+44875870 | Msa0601820:CDS |
| GGATTTCTCAATTTGAGCCT+TGG | 0.378180 | 4_2:+44875167 | Msa0601820:CDS |
| AAATATATTGGTGGCAAAGA+TGG | 0.379539 | 4_2:+44874791 | Msa0601820:exon |
| AGCCTTGGCTTCAATTCCAT+TGG | 0.394580 | 4_2:+44875182 | Msa0601820:CDS |
| CGATCCTCCTTTGTCGTCTC+AGG | 0.401787 | 4_2:+44876934 | Msa0601820:CDS |
| AGCAATCTTGGTTTCCCATT+CGG | 0.407651 | 4_2:+44874909 | Msa0601820:CDS |
| CAAATATTCTCCTCTAATCT+TGG | 0.410630 | 4_2:+44876385 | Msa0601820:CDS |
| ATGACAGTCTTCATGTCAAC+AGG | 0.417274 | 4_2:-44875113 | None:intergenic |
| AGTCTTCATGTCAACAGGTT+TGG | 0.432306 | 4_2:-44875108 | None:intergenic |
| TCTACGTTTCAATCTGTTTG+AGG | 0.451737 | 4_2:+44875085 | Msa0601820:CDS |
| AATATATTGGTGGCAAAGAT+GGG | 0.455967 | 4_2:+44874792 | Msa0601820:exon |
| TAATGTTCCTTTCAGTGAAA+GGG | 0.465034 | 4_2:-44876832 | None:intergenic |
| ATTCTAAATGGTGTCTCCAT+TGG | 0.473165 | 4_2:+44875146 | Msa0601820:CDS |
| TTTCAGGCCCTCTTGTCGAT+CGG | 0.475202 | 4_2:+44876333 | Msa0601820:CDS |
| CCAGTAACATATCAAGTGTT+GGG | 0.487472 | 4_2:+44876758 | Msa0601820:CDS |
| ATAATGTTCCTTTCAGTGAA+AGG | 0.490738 | 4_2:-44876833 | None:intergenic |
| AAAAGAATTGCTGCTTGGAA+TGG | 0.498395 | 4_2:-44876308 | None:intergenic |
| AAACATGGATGATCAGGAAA+AGG | 0.505311 | 4_2:+44877077 | Msa0601820:CDS |
| GGTTATTATAATGTTCACTC+AGG | 0.508353 | 4_2:+44877191 | Msa0601820:three_prime_UTR |
| GATAGCTAGAAGTGAAAGAA+TGG | 0.517732 | 4_2:-44875934 | None:intergenic |
| TCCAGTAACATATCAAGTGT+TGG | 0.519813 | 4_2:+44876757 | Msa0601820:CDS |
| TCCTTTCAGTGAAAGGGTCA+TGG | 0.532382 | 4_2:-44876826 | None:intergenic |
| TCCATGACCCTTTCACTGAA+AGG | 0.541368 | 4_2:+44876825 | Msa0601820:CDS |
| GTTTCTAGCATAACTGTGAA+TGG | 0.548850 | 4_2:-44875693 | None:intergenic |
| GGCTTTGTTGCATATGACAA+TGG | 0.551399 | 4_2:-44874880 | None:intergenic |
| GCTCAAATTGAGAAATCCAA+TGG | 0.553871 | 4_2:-44875162 | None:intergenic |
| TTAAGATCTTTCATAATTTG+GGG | 0.558480 | 4_2:+44877170 | Msa0601820:three_prime_UTR |
| GCTATCATAACAACATGTGT+TGG | 0.567567 | 4_2:+44875951 | Msa0601820:CDS |
| CAGCCACAACACTTACAAGT+TGG | 0.572331 | 4_2:+44875027 | Msa0601820:intron |
| ACAACACATACCTTATACAA+AGG | 0.577646 | 4_2:-44874408 | None:intergenic |
| TAGTAGTGACTATCTTATTG+AGG | 0.585732 | 4_2:-44874315 | None:intergenic |
| ATCCAATGGAATTGAAGCCA+AGG | 0.586597 | 4_2:-44875184 | None:intergenic |
| AATTTGATTTACACTAAACA+AGG | 0.586605 | 4_2:-44877218 | None:intergenic |
| TGAAACGTAGAGCCACATGA+AGG | 0.588235 | 4_2:-44875073 | None:intergenic |
| TGGTGCACTATTCCTCTCTG+TGG | 0.590635 | 4_2:+44874845 | Msa0601820:CDS |
| GTTATTATAATGTTCACTCA+GGG | 0.599976 | 4_2:+44877192 | Msa0601820:three_prime_UTR |
| CTGCTTGGAATGGAGCAGAC+TGG | 0.603506 | 4_2:-44876298 | None:intergenic |
| GTAAACCTGATAGAATCCAA+TGG | 0.616739 | 4_2:-44875198 | None:intergenic |
| GATGAGATGTTAAAATCATG+AGG | 0.622736 | 4_2:-44874095 | None:intergenic |
| CTAGAACAAGACAAGTCTTG+AGG | 0.626745 | 4_2:-44876784 | None:intergenic |
| AAAATTACCTGAGACGACAA+AGG | 0.636716 | 4_2:-44876941 | None:intergenic |
| GTTAGCATCCGATCGACAAG+AGG | 0.641060 | 4_2:-44876341 | None:intergenic |
| CATAACATAAAATTAACACA+TGG | 0.656642 | 4_2:-44874176 | None:intergenic |
| GAACAAGACAAGTCTTGAGG+TGG | 0.660929 | 4_2:-44876781 | None:intergenic |
| GAAACGTAGAGCCACATGAA+GGG | 0.662091 | 4_2:-44875072 | None:intergenic |
| ATGCCAACTTGTAAGTGTTG+TGG | 0.665045 | 4_2:-44875030 | None:intergenic |
| ATTACCTGAGACGACAAAGG+AGG | 0.680324 | 4_2:-44876938 | None:intergenic |
| TTAGCATCCGATCGACAAGA+GGG | 0.684810 | 4_2:-44876340 | None:intergenic |
| TGAGTCTAAGAAATCAAACA+AGG | 0.696876 | 4_2:+44877107 | Msa0601820:CDS |
| AGACTGGTAGAGAAGTTGTG+TGG | 0.708746 | 4_2:-44876282 | None:intergenic |
| AGACAGAAGAAGCCACAGAG+AGG | 0.714406 | 4_2:-44874857 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAATTCCTATTTATA+AGG | - | chr4_2:44874505-44874524 | None:intergenic | 10.0% |
| !! | ATTAATATATTTATTACTAG+TGG | - | chr4_2:44875237-44875256 | None:intergenic | 10.0% |
| !! | GAAAAAAATTTACAAATATT+TGG | + | chr4_2:44875260-44875279 | Msa0601820:intron | 10.0% |
| !!! | CAAGATTTTATTTATTAAAT+CGG | - | chr4_2:44875540-44875559 | None:intergenic | 10.0% |
| !! | ATTACATTATGTATTAATTA+GGG | - | chr4_2:44876435-44876454 | None:intergenic | 10.0% |
| !!! | TCATATAATCATATTTTATA+TGG | - | chr4_2:44876629-44876648 | None:intergenic | 10.0% |
| !! | AAAAAAAATTGAAAGGAAAA+GGG | - | chr4_2:44874684-44874703 | None:intergenic | 15.0% |
| !! | AAAAAAAAATTGAAAGGAAA+AGG | - | chr4_2:44874685-44874704 | None:intergenic | 15.0% |
| !! | AACACTAAAAAAAAATTGAA+AGG | - | chr4_2:44874691-44874710 | None:intergenic | 15.0% |
| !! | AGAATCTTGAAAAAATATAT+TGG | + | chr4_2:44874779-44874798 | Msa0601820:five_prime_UTR | 15.0% |
| !!! | TTATTTTTGTCACATTAATT+TGG | + | chr4_2:44875002-44875021 | Msa0601820:intron | 15.0% |
| !! | AATTTCTATAATGAAAGATA+AGG | - | chr4_2:44876149-44876168 | None:intergenic | 15.0% |
| !! | TATACATAAACACTTAATTT+AGG | + | chr4_2:44876172-44876191 | Msa0601820:intron | 15.0% |
| !! | ATACATAAACACTTAATTTA+GGG | + | chr4_2:44876173-44876192 | Msa0601820:intron | 15.0% |
| !! | CATTACATTATGTATTAATT+AGG | - | chr4_2:44876436-44876455 | None:intergenic | 15.0% |
| !! | CTAATTAATACATAATGTAA+TGG | + | chr4_2:44876434-44876453 | Msa0601820:intron | 15.0% |
| !!! | TTGAATTTAACTTTATGTAT+CGG | - | chr4_2:44876580-44876599 | None:intergenic | 15.0% |
| !!! | TATCTTTGATTATATTTTTC+AGG | + | chr4_2:44877014-44877033 | Msa0601820:intron | 15.0% |
| !!! | TTTTAAGATCTTTCATAATT+TGG | + | chr4_2:44877168-44877187 | Msa0601820:three_prime_UTR | 15.0% |
| !!! | TTTAAGATCTTTCATAATTT+GGG | + | chr4_2:44877169-44877188 | Msa0601820:three_prime_UTR | 15.0% |
| !! | ATGATATGACAAAATATAAT+TGG | - | chr4_2:44877303-44877322 | None:intergenic | 15.0% |
| !! | CATAACATAAAATTAACACA+TGG | - | chr4_2:44874179-44874198 | None:intergenic | 20.0% |
| !! | CTTCTACATCAAAAATAAAA+AGG | + | chr4_2:44874273-44874292 | Msa0601820:five_prime_UTR | 20.0% |
| !!! | TTTTAATTCTCCTTTGTATA+AGG | + | chr4_2:44874398-44874417 | Msa0601820:five_prime_UTR | 20.0% |
| !! | AGCATTTATTCCTTATAAAT+AGG | + | chr4_2:44874492-44874511 | Msa0601820:intron | 20.0% |
| !! | ATCTTGAAAAAATATATTGG+TGG | + | chr4_2:44874782-44874801 | Msa0601820:five_prime_UTR | 20.0% |
| !! | AAAAATGATAATTACCGAAT+GGG | - | chr4_2:44874926-44874945 | None:intergenic | 20.0% |
| !! | TAAATAAAATCTTGATCCAA+AGG | + | chr4_2:44875546-44875565 | Msa0601820:intron | 20.0% |
| !! | TTAATTTCAATATCACTACT+AGG | - | chr4_2:44875765-44875784 | None:intergenic | 20.0% |
| !! | AATATTAACATGCTAACAAT+AGG | - | chr4_2:44876006-44876025 | None:intergenic | 20.0% |
| !! | TTAAGATCTTTCATAATTTG+GGG | + | chr4_2:44877170-44877189 | Msa0601820:three_prime_UTR | 20.0% |
| !!! | AATTTGATTTACACTAAACA+AGG | - | chr4_2:44877221-44877240 | None:intergenic | 20.0% |
| !!! | ACATGTTACAAAAAAGTGTT+TGG | + | chr4_2:44874025-44874044 | Msa0601820:five_prime_UTR | 25.0% |
| ! | TAGACTATAATGCATCTAAT+TGG | + | chr4_2:44874062-44874081 | Msa0601820:five_prime_UTR | 25.0% |
| !!! | TTCTTCTTTTTTGCTTCAAA+TGG | + | chr4_2:44874202-44874221 | Msa0601820:five_prime_UTR | 25.0% |
| ! | TTCATTGAGTTTATGTTTGT+TGG | - | chr4_2:44874245-44874264 | None:intergenic | 25.0% |
| !! | TTATTGAGGAATGCAATTTT+TGG | - | chr4_2:44874304-44874323 | None:intergenic | 25.0% |
| !! | TCAATTCCTTAATTTGACTT+TGG | + | chr4_2:44874525-44874544 | Msa0601820:intron | 25.0% |
| ! | GGAAATGCATAAAATAAGTA+TGG | - | chr4_2:44874557-44874576 | None:intergenic | 25.0% |
| ! | ACTAATTACTCATGGTTTAT+AGG | - | chr4_2:44874578-44874597 | None:intergenic | 25.0% |
| ! | ACATGTAAACTAATTACTCA+TGG | - | chr4_2:44874586-44874605 | None:intergenic | 25.0% |
| ! | CAAAAATGATAATTACCGAA+TGG | - | chr4_2:44874927-44874946 | None:intergenic | 25.0% |
| ! | CATACCAATGTTTCAAAAAT+CGG | - | chr4_2:44875594-44875613 | None:intergenic | 25.0% |
| ! | ATTGAAATTAATTCTGACCA+TGG | + | chr4_2:44875774-44875793 | Msa0601820:intron | 25.0% |
| ! | ATAGAGAGAGTTTAATATTC+CGG | - | chr4_2:44875851-44875870 | None:intergenic | 25.0% |
| ! | GAACATTAAAGGATACAATT+TGG | - | chr4_2:44875977-44875996 | None:intergenic | 25.0% |
| ! | ATAGGAAGATAGAACATTAA+AGG | - | chr4_2:44875988-44876007 | None:intergenic | 25.0% |
| ! | GTTAGCATGTTAATATTATG+TGG | + | chr4_2:44876009-44876028 | Msa0601820:intron | 25.0% |
| ! | TTAAAGTTAAAAGAGGTTGT+TGG | + | chr4_2:44876198-44876217 | Msa0601820:intron | 25.0% |
| !!! | TACATAATGTAATGGATAAC+AGG | + | chr4_2:44876442-44876461 | Msa0601820:intron | 25.0% |
| !! | AATTTAACTTTATGTATCGG+TGG | - | chr4_2:44876577-44876596 | None:intergenic | 25.0% |
| !! | TGTTTTTCCTATTACTAGAA+AGG | - | chr4_2:44876735-44876754 | None:intergenic | 25.0% |
| !!! | ATAAATTCACCACTTTTGAA+TGG | + | chr4_2:44877051-44877070 | Msa0601820:CDS | 25.0% |
| !!! | ATGTTTTTACCATTCAAAAG+TGG | - | chr4_2:44877063-44877082 | None:intergenic | 25.0% |
| !! | ACTTTTGAATGGTAAAAACA+TGG | + | chr4_2:44877062-44877081 | Msa0601820:CDS | 25.0% |
| ! | GTTATTATAATGTTCACTCA+GGG | + | chr4_2:44877192-44877211 | Msa0601820:three_prime_UTR | 25.0% |
| !! | AGTTTTACATCATCATTCAA+AGG | - | chr4_2:44877378-44877397 | None:intergenic | 25.0% |
| GATGAGATGTTAAAATCATG+AGG | - | chr4_2:44874098-44874117 | None:intergenic | 30.0% | |
| ! | TGAGTTTATGTTTGTTGGTT+TGG | - | chr4_2:44874240-44874259 | None:intergenic | 30.0% |
| TAGTAGTGACTATCTTATTG+AGG | - | chr4_2:44874318-44874337 | None:intergenic | 30.0% | |
| ACAACACATACCTTATACAA+AGG | - | chr4_2:44874411-44874430 | None:intergenic | 30.0% | |
| TTGCTACCAAAGTCAAATTA+AGG | - | chr4_2:44874534-44874553 | None:intergenic | 30.0% | |
| ! | AAATATATTGGTGGCAAAGA+TGG | + | chr4_2:44874791-44874810 | Msa0601820:exon | 30.0% |
| ! | AATATATTGGTGGCAAAGAT+GGG | + | chr4_2:44874792-44874811 | Msa0601820:exon | 30.0% |
| AGAGATGTCAAAAACTCAAT+TGG | + | chr4_2:44874815-44874834 | Msa0601820:CDS | 30.0% | |
| GAGATGTCAAAAACTCAATT+GGG | + | chr4_2:44874816-44874835 | Msa0601820:CDS | 30.0% | |
| AGATGTCAAAAACTCAATTG+GGG | + | chr4_2:44874817-44874836 | Msa0601820:CDS | 30.0% | |
| !! | ATGCTTTTTGGCATTCTAAA+TGG | + | chr4_2:44875134-44875153 | Msa0601820:CDS | 30.0% |
| AAAACTTAGTACATGCATCA+AGG | - | chr4_2:44875287-44875306 | None:intergenic | 30.0% | |
| AAGCAGACTGGAAAATAATT+AGG | - | chr4_2:44875380-44875399 | None:intergenic | 30.0% | |
| TGCTTGAAACAGATTGAATT+GGG | + | chr4_2:44875395-44875414 | Msa0601820:intron | 30.0% | |
| TCTCTATTCTTCTTACTTGT+TGG | + | chr4_2:44875864-44875883 | Msa0601820:CDS | 30.0% | |
| ! | GATCTTCAACTCAATTTTGT+TGG | + | chr4_2:44875909-44875928 | Msa0601820:CDS | 30.0% |
| !! | TAGGGCTTTAAAGTTAAAAG+AGG | + | chr4_2:44876191-44876210 | Msa0601820:intron | 30.0% |
| AAACAAAAAGAATTGCTGCT+TGG | - | chr4_2:44876316-44876335 | None:intergenic | 30.0% | |
| CAAATATTCTCCTCTAATCT+TGG | + | chr4_2:44876385-44876404 | Msa0601820:CDS | 30.0% | |
| !! | TAATGTAATGGATAACAGGA+AGG | + | chr4_2:44876446-44876465 | Msa0601820:intron | 30.0% |
| ! | GATGAAAGTCTGAAATACAA+AGG | - | chr4_2:44876672-44876691 | None:intergenic | 30.0% |
| ! | TTTAGCACCTTTCTAGTAAT+AGG | + | chr4_2:44876725-44876744 | Msa0601820:CDS | 30.0% |
| TAATGTTCCTTTCAGTGAAA+GGG | - | chr4_2:44876835-44876854 | None:intergenic | 30.0% | |
| ATAATGTTCCTTTCAGTGAA+AGG | - | chr4_2:44876836-44876855 | None:intergenic | 30.0% | |
| TTCACTGAAAGGAACATTAT+TGG | + | chr4_2:44876836-44876855 | Msa0601820:CDS | 30.0% | |
| ! | GAGTTTCTTTTTGTTCTCTT+GGG | - | chr4_2:44876909-44876928 | None:intergenic | 30.0% |
| GAGAAACTATGTGAGAAAAA+TGG | - | chr4_2:44876971-44876990 | None:intergenic | 30.0% | |
| TGAGTCTAAGAAATCAAACA+AGG | + | chr4_2:44877107-44877126 | Msa0601820:CDS | 30.0% | |
| GGTTATTATAATGTTCACTC+AGG | + | chr4_2:44877191-44877210 | Msa0601820:three_prime_UTR | 30.0% | |
| ACATGGACATTAAGCTTTCA+TGG | - | chr4_2:44874162-44874181 | None:intergenic | 35.0% | |
| TTGGACTTGAGAAGAATTTC+AGG | + | chr4_2:44874358-44874377 | Msa0601820:five_prime_UTR | 35.0% | |
| GATGTCAAAAACTCAATTGG+GGG | + | chr4_2:44874818-44874837 | Msa0601820:CDS | 35.0% | |
| AAAACTCAATTGGGGGTTAT+TGG | + | chr4_2:44874825-44874844 | Msa0601820:CDS | 35.0% | |
| AAAGCCTTAATGAGCAATCT+TGG | + | chr4_2:44874897-44874916 | Msa0601820:CDS | 35.0% | |
| GAAACCAAGATTGCTCATTA+AGG | - | chr4_2:44874904-44874923 | None:intergenic | 35.0% | |
| ! | ACTTACAAGTTGGCATTTGA+TGG | + | chr4_2:44875037-44875056 | Msa0601820:CDS | 35.0% |
| TCTACGTTTCAATCTGTTTG+AGG | + | chr4_2:44875085-44875104 | Msa0601820:CDS | 35.0% | |
| ! | ATGAAGACTGTCATGCTTTT+TGG | + | chr4_2:44875122-44875141 | Msa0601820:CDS | 35.0% |
| ATTCTAAATGGTGTCTCCAT+TGG | + | chr4_2:44875146-44875165 | Msa0601820:CDS | 35.0% | |
| GCTCAAATTGAGAAATCCAA+TGG | - | chr4_2:44875165-44875184 | None:intergenic | 35.0% | |
| CAATTCCATTGGATTCTATC+AGG | + | chr4_2:44875193-44875212 | Msa0601820:CDS | 35.0% | |
| GTAAACCTGATAGAATCCAA+TGG | - | chr4_2:44875201-44875220 | None:intergenic | 35.0% | |
| CTGCTTGAAACAGATTGAAT+TGG | + | chr4_2:44875394-44875413 | Msa0601820:intron | 35.0% | |
| GCTTGAAACAGATTGAATTG+GGG | + | chr4_2:44875396-44875415 | Msa0601820:intron | 35.0% | |
| TTGATCATCTTATTCAGTCG+TGG | + | chr4_2:44875509-44875528 | Msa0601820:intron | 35.0% | |
| !! | GTTTCTAGCATAACTGTGAA+TGG | - | chr4_2:44875696-44875715 | None:intergenic | 35.0% |
| ! | TTTTCCTAAAGAAGCAGTTC+AGG | + | chr4_2:44875718-44875737 | Msa0601820:CDS | 35.0% |
| TAAGCAATTTAGCATGACCA+TGG | - | chr4_2:44875794-44875813 | None:intergenic | 35.0% | |
| ! | ATTTTACTACTATGTGCAGC+CGG | + | chr4_2:44875829-44875848 | Msa0601820:intron | 35.0% |
| ! | TTCTTCTTACTTGTTGGAGT+TGG | + | chr4_2:44875870-44875889 | Msa0601820:CDS | 35.0% |
| GATAGCTAGAAGTGAAAGAA+TGG | - | chr4_2:44875937-44875956 | None:intergenic | 35.0% | |
| GCTATCATAACAACATGTGT+TGG | + | chr4_2:44875951-44875970 | Msa0601820:CDS | 35.0% | |
| AAGTTATCCTAGAGAGCTTA+TGG | - | chr4_2:44876104-44876123 | None:intergenic | 35.0% | |
| ! | AAAAGAATTGCTGCTTGGAA+TGG | - | chr4_2:44876311-44876330 | None:intergenic | 35.0% |
| !! | GCAGCAATTCTTTTTGTTTC+AGG | + | chr4_2:44876317-44876336 | Msa0601820:CDS | 35.0% |
| ! | GTATGCAAAGACATTTTGCT+TGG | - | chr4_2:44876366-44876385 | None:intergenic | 35.0% |
| ACAATACTCACCAAGATTAG+AGG | - | chr4_2:44876398-44876417 | None:intergenic | 35.0% | |
| TCCAGTAACATATCAAGTGT+TGG | + | chr4_2:44876757-44876776 | Msa0601820:CDS | 35.0% | |
| CCAGTAACATATCAAGTGTT+GGG | + | chr4_2:44876758-44876777 | Msa0601820:CDS | 35.0% | |
| !! | ACTTGTCTTGTTCTAGGATT+TGG | + | chr4_2:44876791-44876810 | Msa0601820:CDS | 35.0% |
| ! | GGAATACTAGTAGCAGTTTT+TGG | + | chr4_2:44876857-44876876 | Msa0601820:CDS | 35.0% |
| !! | ACTAGTAGCAGTTTTTGGAA+TGG | + | chr4_2:44876862-44876881 | Msa0601820:CDS | 35.0% |
| !!! | CTAGTAGCAGTTTTTGGAAT+GGG | + | chr4_2:44876863-44876882 | Msa0601820:CDS | 35.0% |
| ! | CGAGTTTCTTTTTGTTCTCT+TGG | - | chr4_2:44876910-44876929 | None:intergenic | 35.0% |
| AAAATTACCTGAGACGACAA+AGG | - | chr4_2:44876944-44876963 | None:intergenic | 35.0% | |
| TGGTAAAAACATGGATGATC+AGG | + | chr4_2:44877071-44877090 | Msa0601820:CDS | 35.0% | |
| AAACATGGATGATCAGGAAA+AGG | + | chr4_2:44877077-44877096 | Msa0601820:CDS | 35.0% | |
| !!! | GAGGAATGCAATTTTTGGTG+TGG | - | chr4_2:44874299-44874318 | None:intergenic | 40.0% |
| ! | TCTTCTCTGTTTCTCTCTCT+TGG | + | chr4_2:44874339-44874358 | Msa0601820:five_prime_UTR | 40.0% |
| GCATGTCTTTATGTTCCACT+TGG | + | chr4_2:44874458-44874477 | Msa0601820:intron | 40.0% | |
| TGCTACTAGTACTAACCAAG+TGG | - | chr4_2:44874476-44874495 | None:intergenic | 40.0% | |
| !! | GGCTTTGTTGCATATGACAA+TGG | - | chr4_2:44874883-44874902 | None:intergenic | 40.0% |
| AGCAATCTTGGTTTCCCATT+CGG | + | chr4_2:44874909-44874928 | Msa0601820:CDS | 40.0% | |
| ! | ATGCCAACTTGTAAGTGTTG+TGG | - | chr4_2:44875033-44875052 | None:intergenic | 40.0% |
| !! | TACTTTTTGCACCCTTCATG+TGG | + | chr4_2:44875061-44875080 | Msa0601820:CDS | 40.0% |
| AGTCTTCATGTCAACAGGTT+TGG | - | chr4_2:44875111-44875130 | None:intergenic | 40.0% | |
| ATGACAGTCTTCATGTCAAC+AGG | - | chr4_2:44875116-44875135 | None:intergenic | 40.0% | |
| GGATTTCTCAATTTGAGCCT+TGG | + | chr4_2:44875167-44875186 | Msa0601820:CDS | 40.0% | |
| ATCCAATGGAATTGAAGCCA+AGG | - | chr4_2:44875187-44875206 | None:intergenic | 40.0% | |
| CTCGGTTCAATTGGCTAAAT+TGG | - | chr4_2:44875329-44875348 | None:intergenic | 40.0% | |
| TAGCCAATTGAACCGAGAAT+CGG | + | chr4_2:44875332-44875351 | Msa0601820:intron | 40.0% | |
| ! | TAACCGATTCTCGGTTCAAT+TGG | - | chr4_2:44875338-44875357 | None:intergenic | 40.0% |
| TCAATCTGTTTCAAGCAGAC+TGG | - | chr4_2:44875392-44875411 | None:intergenic | 40.0% | |
| GAATTGGGGTTAAACCAGTT+TGG | + | chr4_2:44875410-44875429 | Msa0601820:intron | 40.0% | |
| GATCGAATTGGTGAAACCTT+TGG | - | chr4_2:44875565-44875584 | None:intergenic | 40.0% | |
| GGTTTCACCAATTCGATCTT+CGG | + | chr4_2:44875567-44875586 | Msa0601820:intron | 40.0% | |
| !!! | CGGTCCGATTTTTGAAACAT+TGG | + | chr4_2:44875587-44875606 | Msa0601820:intron | 40.0% |
| GTTACCTGAACTGCTTCTTT+AGG | - | chr4_2:44875725-44875744 | None:intergenic | 40.0% | |
| ! | AAAGCACTTGTGAGAGCTTA+TGG | + | chr4_2:44876060-44876079 | Msa0601820:intron | 40.0% |
| CCCAACACTTGATATGTTAC+TGG | - | chr4_2:44876761-44876780 | None:intergenic | 40.0% | |
| CTAGAACAAGACAAGTCTTG+AGG | - | chr4_2:44876787-44876806 | None:intergenic | 40.0% | |
| ! | CTCAAGACTTGTCTTGTTCT+AGG | + | chr4_2:44876785-44876804 | Msa0601820:CDS | 40.0% |
| CATAAAGACATGCTGCATGC+AGG | - | chr4_2:44874451-44874470 | None:intergenic | 45.0% | |
| ! | CAACTTGTAAGTGTTGTGGC+TGG | - | chr4_2:44875029-44875048 | None:intergenic | 45.0% |
| CAGCCACAACACTTACAAGT+TGG | + | chr4_2:44875027-44875046 | Msa0601820:intron | 45.0% | |
| GAAACGTAGAGCCACATGAA+GGG | - | chr4_2:44875075-44875094 | None:intergenic | 45.0% | |
| TGAAACGTAGAGCCACATGA+AGG | - | chr4_2:44875076-44875095 | None:intergenic | 45.0% | |
| AGCCTTGGCTTCAATTCCAT+TGG | + | chr4_2:44875182-44875201 | Msa0601820:CDS | 45.0% | |
| TGAACCGAGAATCGGTTAGT+TGG | + | chr4_2:44875340-44875359 | Msa0601820:intron | 45.0% | |
| ! | CTGACCAACTAACCGATTCT+CGG | - | chr4_2:44875347-44875366 | None:intergenic | 45.0% |
| ! | GAATCGGTTAGTTGGTCAGT+TGG | + | chr4_2:44875348-44875367 | Msa0601820:intron | 45.0% |
| GGGTTAAACCAGTTTGGTTG+CGG | + | chr4_2:44875416-44875435 | Msa0601820:intron | 45.0% | |
| AATCGGACCGAAGATCGAAT+TGG | - | chr4_2:44875577-44875596 | None:intergenic | 45.0% | |
| GAGAAGTCCATAAGCTCTCT+AGG | + | chr4_2:44876094-44876113 | Msa0601820:intron | 45.0% | |
| AGACTGGTAGAGAAGTTGTG+TGG | - | chr4_2:44876285-44876304 | None:intergenic | 45.0% | |
| TTAGCATCCGATCGACAAGA+GGG | - | chr4_2:44876343-44876362 | None:intergenic | 45.0% | |
| ! | GTTAGTTTCAGACACTGGAC+TGG | - | chr4_2:44876520-44876539 | None:intergenic | 45.0% |
| ! | GTCGTGTTAGTTTCAGACAC+TGG | - | chr4_2:44876525-44876544 | None:intergenic | 45.0% |
| GAACAAGACAAGTCTTGAGG+TGG | - | chr4_2:44876784-44876803 | None:intergenic | 45.0% | |
| TCCATGACCCTTTCACTGAA+AGG | + | chr4_2:44876825-44876844 | Msa0601820:CDS | 45.0% | |
| TCCTTTCAGTGAAAGGGTCA+TGG | - | chr4_2:44876829-44876848 | None:intergenic | 45.0% | |
| GTTCTCTTGGGTGCAGAAAT+AGG | - | chr4_2:44876897-44876916 | None:intergenic | 45.0% | |
| ATTACCTGAGACGACAAAGG+AGG | - | chr4_2:44876941-44876960 | None:intergenic | 45.0% | |
| !! | AGTAAAAAAATATTAAAAAA+AGG | - | chr4_2:44875481-44875500 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAATTATGTAT+TGG | - | chr4_2:44876549-44876568 | None:intergenic | 5.0% |
| TGGTGCACTATTCCTCTCTG+TGG | + | chr4_2:44874845-44874864 | Msa0601820:CDS | 50.0% | |
| AGACAGAAGAAGCCACAGAG+AGG | - | chr4_2:44874860-44874879 | None:intergenic | 50.0% | |
| TGAATCGACCGCAACCAAAC+TGG | - | chr4_2:44875427-44875446 | None:intergenic | 50.0% | |
| TTTCAGGCCCTCTTGTCGAT+CGG | + | chr4_2:44876333-44876352 | Msa0601820:CDS | 50.0% | |
| GTTAGCATCCGATCGACAAG+AGG | - | chr4_2:44876344-44876363 | None:intergenic | 50.0% | |
| ! | AGTTTCAGACACTGGACTGG+TGG | - | chr4_2:44876517-44876536 | None:intergenic | 50.0% |
| CTGCTTGGAATGGAGCAGAC+TGG | - | chr4_2:44876301-44876320 | None:intergenic | 55.0% | |
| CGATCCTCCTTTGTCGTCTC+AGG | + | chr4_2:44876934-44876953 | Msa0601820:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 44874000 | 44877450 | 44874000 | ID=Msa0601820;Name=Msa0601820 |
| chr4_2 | mRNA | 44874000 | 44877450 | 44874000 | ID=Msa0601820-mRNA-1;Parent=Msa0601820;Name=Msa0601820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=452|1|1|1|0.85|0.75|8|307|349 |
| chr4_2 | exon | 44874000 | 44874419 | 44874000 | ID=Msa0601820-mRNA-1:exon:9963;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44874778 | 44874930 | 44874778 | ID=Msa0601820-mRNA-1:exon:9964;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44875030 | 44875214 | 44875030 | ID=Msa0601820-mRNA-1:exon:9965;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44875672 | 44875739 | 44875672 | ID=Msa0601820-mRNA-1:exon:9966;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44875848 | 44875980 | 44875848 | ID=Msa0601820-mRNA-1:exon:9967;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44876245 | 44876406 | 44876245 | ID=Msa0601820-mRNA-1:exon:9968;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44876683 | 44876955 | 44876683 | ID=Msa0601820-mRNA-1:exon:9969;Parent=Msa0601820-mRNA-1 |
| chr4_2 | exon | 44877036 | 44877450 | 44877036 | ID=Msa0601820-mRNA-1:exon:9970;Parent=Msa0601820-mRNA-1 |
| chr4_2 | five_prime_UTR | 44874000 | 44874419 | 44874000 | ID=Msa0601820-mRNA-1:five_prime_utr;Parent=Msa0601820-mRNA-1 |
| chr4_2 | five_prime_UTR | 44874778 | 44874809 | 44874778 | ID=Msa0601820-mRNA-1:five_prime_utr;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44874810 | 44874930 | 44874810 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44875030 | 44875214 | 44875030 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44875672 | 44875739 | 44875672 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44875848 | 44875980 | 44875848 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44876245 | 44876406 | 44876245 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44876683 | 44876955 | 44876683 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | CDS | 44877036 | 44877143 | 44877036 | ID=Msa0601820-mRNA-1:cds;Parent=Msa0601820-mRNA-1 |
| chr4_2 | three_prime_UTR | 44877144 | 44877450 | 44877144 | ID=Msa0601820-mRNA-1:three_prime_utr;Parent=Msa0601820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
