Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602810 | XP_003606586.1 | 96.610 | 472 | 15 | 1 | 1 | 471 | 1 | 472 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602810 | sp|Q9SIB2|KCS12_ARATH | 72.807 | 456 | 117 | 3 | 19 | 468 | 19 | 473 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602810 | G7JSN8 | 96.610 | 472 | 15 | 1 | 1 | 471 | 1 | 472 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0602810 | Msa0872110 | 0.800078 | 1.706210e-48 | -8.615850e-47 |
| Msa0151790 | Msa0602810 | 0.822132 | 2.789864e-53 | -8.615850e-47 |
| Msa0234930 | Msa0602810 | 0.803431 | 3.497681e-49 | -8.615850e-47 |
| Msa0421790 | Msa0602810 | 0.814475 | 1.511590e-51 | -8.615850e-47 |
| Msa0467890 | Msa0602810 | 0.821989 | 3.010931e-53 | -8.615850e-47 |
| Msa0467970 | Msa0602810 | 0.825412 | 4.754624e-54 | -8.615850e-47 |
| Msa0273270 | Msa0602810 | 0.803903 | 2.792078e-49 | -8.615850e-47 |
| Msa0508030 | Msa0602810 | 0.813730 | 2.207763e-51 | -8.615850e-47 |
| Msa0514280 | Msa0602810 | 0.813874 | 2.051966e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602810 | MtrunA17_Chr4g0030581 | 96.610 | 472 | 15 | 1 | 1 | 471 | 1 | 472 | 0.0 | 944 |
| Msa0602810 | MtrunA17_Chr4g0030601 | 89.809 | 471 | 41 | 1 | 1 | 471 | 1 | 464 | 0.0 | 887 |
| Msa0602810 | MtrunA17_Chr4g0030591 | 86.047 | 473 | 64 | 1 | 1 | 471 | 1 | 473 | 0.0 | 827 |
| Msa0602810 | MtrunA17_Chr2g0327721 | 71.125 | 471 | 130 | 4 | 1 | 466 | 1 | 470 | 0.0 | 712 |
| Msa0602810 | MtrunA17_Chr1g0212951 | 53.632 | 468 | 206 | 3 | 1 | 457 | 1 | 468 | 0.0 | 538 |
| Msa0602810 | MtrunA17_Chr7g0276251 | 42.563 | 437 | 228 | 7 | 12 | 440 | 104 | 525 | 1.00e-121 | 365 |
| Msa0602810 | MtrunA17_Chr1g0188051 | 41.026 | 429 | 237 | 5 | 15 | 440 | 88 | 503 | 1.84e-109 | 333 |
| Msa0602810 | MtrunA17_Chr4g0035081 | 39.150 | 447 | 248 | 8 | 3 | 440 | 68 | 499 | 1.12e-108 | 331 |
| Msa0602810 | MtrunA17_Chr5g0423521 | 38.724 | 439 | 249 | 7 | 7 | 440 | 64 | 487 | 1.09e-107 | 328 |
| Msa0602810 | MtrunA17_Chr1g0166191 | 40.758 | 422 | 235 | 4 | 22 | 440 | 100 | 509 | 2.34e-107 | 328 |
| Msa0602810 | MtrunA17_Chr3g0136561 | 37.727 | 440 | 265 | 3 | 6 | 440 | 465 | 900 | 9.76e-107 | 337 |
| Msa0602810 | MtrunA17_Chr1g0209881 | 37.986 | 437 | 251 | 7 | 9 | 440 | 66 | 487 | 5.37e-106 | 324 |
| Msa0602810 | MtrunA17_Chr4g0063011 | 38.863 | 422 | 243 | 4 | 22 | 440 | 82 | 491 | 4.07e-105 | 322 |
| Msa0602810 | MtrunA17_Chr2g0306781 | 42.133 | 375 | 202 | 4 | 69 | 440 | 34 | 396 | 5.55e-98 | 300 |
| Msa0602810 | MtrunA17_Chr6g0480561 | 37.500 | 432 | 242 | 7 | 19 | 440 | 52 | 465 | 1.04e-97 | 301 |
| Msa0602810 | MtrunA17_Chr2g0277841 | 38.756 | 418 | 238 | 6 | 27 | 440 | 45 | 448 | 2.82e-96 | 298 |
| Msa0602810 | MtrunA17_Chr7g0276241 | 45.638 | 298 | 141 | 2 | 148 | 440 | 2 | 283 | 2.52e-93 | 284 |
| Msa0602810 | MtrunA17_Chr2g0282281 | 37.343 | 399 | 233 | 3 | 29 | 426 | 110 | 492 | 3.90e-91 | 286 |
| Msa0602810 | MtrunA17_Chr2g0295781 | 36.124 | 418 | 252 | 6 | 26 | 440 | 43 | 448 | 4.54e-90 | 281 |
| Msa0602810 | MtrunA17_Chr7g0250661 | 44.932 | 296 | 149 | 3 | 148 | 440 | 2 | 286 | 2.10e-85 | 264 |
| Msa0602810 | MtrunA17_Chr1g0204301 | 36.058 | 416 | 244 | 10 | 32 | 440 | 83 | 483 | 1.38e-79 | 255 |
| Msa0602810 | MtrunA17_Chr3g0115021 | 33.898 | 413 | 256 | 6 | 32 | 440 | 83 | 482 | 3.17e-76 | 246 |
| Msa0602810 | MtrunA17_Chr3g0115041 | 33.898 | 413 | 256 | 6 | 32 | 440 | 83 | 482 | 3.31e-76 | 246 |
| Msa0602810 | MtrunA17_Chr6g0469631 | 33.898 | 413 | 256 | 6 | 32 | 440 | 82 | 481 | 6.62e-72 | 235 |
| Msa0602810 | MtrunA17_Chr6g0461631 | 39.194 | 273 | 152 | 3 | 182 | 451 | 3 | 264 | 2.25e-62 | 203 |
| Msa0602810 | MtrunA17_Chr4g0026871 | 42.553 | 235 | 120 | 4 | 210 | 440 | 1 | 224 | 6.19e-59 | 193 |
| Msa0602810 | MtrunA17_Chr4g0026791 | 41.053 | 190 | 100 | 3 | 210 | 398 | 1 | 179 | 8.64e-41 | 144 |
| Msa0602810 | MtrunA17_Chr4g0026721 | 40.764 | 157 | 79 | 3 | 287 | 440 | 11 | 156 | 8.79e-36 | 130 |
| Msa0602810 | MtrunA17_Chr6g0461621 | 33.136 | 169 | 105 | 5 | 18 | 183 | 55 | 218 | 8.16e-24 | 99.8 |
| Msa0602810 | MtrunA17_Chr4g0026861 | 29.697 | 165 | 115 | 1 | 19 | 183 | 50 | 213 | 2.58e-23 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602810 | AT2G28630.2 | 72.807 | 456 | 117 | 3 | 19 | 468 | 19 | 473 | 0.0 | 692 |
| Msa0602810 | AT2G28630.1 | 72.807 | 456 | 117 | 3 | 19 | 468 | 19 | 473 | 0.0 | 692 |
| Msa0602810 | AT1G07720.2 | 71.767 | 464 | 120 | 4 | 14 | 468 | 57 | 518 | 0.0 | 687 |
| Msa0602810 | AT1G07720.1 | 71.767 | 464 | 120 | 4 | 14 | 468 | 14 | 475 | 0.0 | 686 |
| Msa0602810 | AT5G04530.1 | 54.157 | 445 | 193 | 4 | 17 | 457 | 18 | 455 | 0.0 | 526 |
| Msa0602810 | AT1G01120.1 | 40.000 | 440 | 242 | 6 | 10 | 442 | 101 | 525 | 5.21e-117 | 353 |
| Msa0602810 | AT2G46720.1 | 38.964 | 444 | 254 | 4 | 2 | 440 | 31 | 462 | 2.27e-112 | 340 |
| Msa0602810 | AT2G16280.1 | 40.662 | 423 | 237 | 4 | 22 | 442 | 99 | 509 | 2.56e-110 | 336 |
| Msa0602810 | AT1G25450.1 | 39.367 | 442 | 248 | 7 | 4 | 440 | 57 | 483 | 1.14e-109 | 333 |
| Msa0602810 | AT1G19440.1 | 38.702 | 447 | 250 | 7 | 3 | 440 | 80 | 511 | 4.23e-108 | 330 |
| Msa0602810 | AT1G04220.1 | 38.411 | 453 | 251 | 8 | 2 | 440 | 74 | 512 | 4.74e-107 | 328 |
| Msa0602810 | AT1G68530.1 | 38.636 | 440 | 250 | 7 | 6 | 440 | 64 | 488 | 1.21e-106 | 326 |
| Msa0602810 | AT4G34510.1 | 39.294 | 425 | 241 | 4 | 22 | 442 | 73 | 484 | 1.41e-106 | 325 |
| Msa0602810 | AT2G26640.1 | 39.080 | 435 | 249 | 5 | 9 | 440 | 79 | 500 | 2.59e-106 | 325 |
| Msa0602810 | AT3G10280.1 | 37.838 | 444 | 252 | 5 | 2 | 440 | 31 | 455 | 3.21e-106 | 323 |
| Msa0602810 | AT5G43760.1 | 40.000 | 430 | 231 | 8 | 23 | 440 | 103 | 517 | 1.39e-104 | 322 |
| Msa0602810 | AT2G15090.1 | 37.104 | 442 | 248 | 7 | 13 | 440 | 51 | 476 | 7.86e-104 | 318 |
| Msa0602810 | AT2G26250.1 | 36.156 | 437 | 260 | 4 | 22 | 440 | 112 | 547 | 4.96e-102 | 316 |
| Msa0602810 | AT4G34250.1 | 38.605 | 430 | 238 | 8 | 22 | 440 | 70 | 484 | 9.87e-102 | 313 |
| Msa0602810 | AT4G34520.1 | 38.106 | 433 | 245 | 6 | 22 | 442 | 68 | 489 | 1.26e-99 | 308 |
| Msa0602810 | AT5G49070.1 | 35.909 | 440 | 266 | 6 | 4 | 440 | 26 | 452 | 7.20e-94 | 292 |
| Msa0602810 | AT1G71160.1 | 35.817 | 416 | 242 | 7 | 32 | 440 | 48 | 445 | 1.95e-90 | 283 |
| Msa0602810 | AT3G52160.1 | 32.117 | 411 | 236 | 3 | 16 | 426 | 73 | 440 | 3.33e-76 | 246 |
| Msa0602810 | AT3G52160.2 | 34.648 | 355 | 189 | 3 | 72 | 426 | 16 | 327 | 5.70e-73 | 234 |
| Msa0602810 | AT1G68530.2 | 35.274 | 292 | 182 | 4 | 6 | 294 | 64 | 351 | 5.05e-58 | 196 |
| Msa0602810 | AT5G49070.2 | 28.621 | 290 | 204 | 2 | 4 | 293 | 26 | 312 | 8.93e-38 | 140 |
Find 85 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTACATATGTTTCCTAATT+TGG | 0.070695 | 4_2:+46831200 | Msa0602810:CDS |
| AAGTCTTTGTTGACAATTTA+AGG | 0.088298 | 4_2:+46832007 | Msa0602810:CDS |
| TTCCCTTGTTGGCAAAATTT+TGG | 0.124989 | 4_2:-46832040 | None:intergenic |
| AATCAAAAGAACCAAGAATT+TGG | 0.151534 | 4_2:+46831327 | Msa0602810:CDS |
| AAGAAATAAGTTAGCACTTT+TGG | 0.201713 | 4_2:+46831717 | Msa0602810:CDS |
| CGGCCTTCAAAGATGTTTCT+TGG | 0.209523 | 4_2:-46831418 | None:intergenic |
| GATCGTATAGTTTCCAAATT+AGG | 0.211998 | 4_2:-46831213 | None:intergenic |
| TCATTGCCAGTGTACCAATT+TGG | 0.263580 | 4_2:-46831760 | None:intergenic |
| CTCATCTAGACCCAAATTCT+TGG | 0.296994 | 4_2:-46831338 | None:intergenic |
| TAATTATCCACCAAAGTCTT+TGG | 0.310010 | 4_2:+46832473 | Msa0602810:CDS |
| GGTAGCTTGTGGTATGTGTT+AGG | 0.324055 | 4_2:+46832309 | Msa0602810:CDS |
| AACCTAAGCAATTCCCTTGT+TGG | 0.324150 | 4_2:-46832051 | None:intergenic |
| GACGACAAGAACGTCGATTT+CGG | 0.326349 | 4_2:-46831539 | None:intergenic |
| CGATGTAGTGTCATTCTTGC+AGG | 0.330569 | 4_2:-46832267 | None:intergenic |
| GTCTTTGGTCAATTCTTTCA+TGG | 0.348215 | 4_2:+46832488 | Msa0602810:CDS |
| GTAAGTTTGCTCGCCGATTC+CGG | 0.351600 | 4_2:-46831392 | None:intergenic |
| TCACCATTAAATTTCAAAAC+TGG | 0.358128 | 4_2:+46832156 | Msa0602810:CDS |
| CAGAGTCTCTTAGTCCAAAT+TGG | 0.358921 | 4_2:+46831746 | Msa0602810:CDS |
| ATCAAAAGAACCAAGAATTT+GGG | 0.367372 | 4_2:+46831328 | Msa0602810:CDS |
| AGATCCCGTCGTTCAGTGTT+GGG | 0.368292 | 4_2:-46831450 | None:intergenic |
| AGTCTTTGTTGACAATTTAA+GGG | 0.369626 | 4_2:+46832008 | Msa0602810:CDS |
| AAAGCAGTGATTGATGGAAT+TGG | 0.387221 | 4_2:+46832210 | Msa0602810:CDS |
| AGAATGACACTACATCGTTT+TGG | 0.403512 | 4_2:+46832273 | Msa0602810:CDS |
| TACCTTCACTTGAGAAAGTC+AGG | 0.413091 | 4_2:-46832561 | None:intergenic |
| GCCATTGTAAGTTCCGGAAT+CGG | 0.413937 | 4_2:+46831379 | Msa0602810:CDS |
| GGAGGTAAAGCAGTGATTGA+TGG | 0.422682 | 4_2:+46832204 | Msa0602810:CDS |
| GGAAACTATACGATCAAAAG+AGG | 0.423776 | 4_2:+46831221 | Msa0602810:CDS |
| CGGAACTTACAATGGCTTTG+AGG | 0.426061 | 4_2:-46831372 | None:intergenic |
| CTCAAAGCCATTGTAAGTTC+CGG | 0.431981 | 4_2:+46831373 | Msa0602810:CDS |
| TGCCAACAAGGGAATTGCTT+AGG | 0.432387 | 4_2:+46832049 | Msa0602810:CDS |
| TTACAATTGTTGCATTCAAA+AGG | 0.434595 | 4_2:+46831924 | Msa0602810:CDS |
| TCAGGAAGATCATAGTTGTT+AGG | 0.436130 | 4_2:-46832543 | None:intergenic |
| AGTTCTTCTAAGTCTTCAAC+TGG | 0.436663 | 4_2:+46832114 | Msa0602810:CDS |
| GCACCAAGAAACATCTTTGA+AGG | 0.448515 | 4_2:+46831415 | Msa0602810:CDS |
| TGTTGGAGATGCAAATGTTT+GGG | 0.448918 | 4_2:+46832437 | Msa0602810:CDS |
| CTTGTGTTGGCTTGTGACAT+TGG | 0.455782 | 4_2:-46831270 | None:intergenic |
| TCAAATGCAATAGTTGTTTG+TGG | 0.465403 | 4_2:+46832400 | Msa0602810:CDS |
| CCTAGCATTCTATCTTGTGT+TGG | 0.466409 | 4_2:-46831283 | None:intergenic |
| CAAATGCAATAGTTGTTTGT+GGG | 0.467994 | 4_2:+46832401 | Msa0602810:CDS |
| CTTTCATGGAGAAGTATAGT+TGG | 0.468430 | 4_2:+46832502 | Msa0602810:CDS |
| GAAGATGAGCAGGGTAGGCT+TGG | 0.474253 | 4_2:+46831946 | Msa0602810:CDS |
| GCCGGAACGGAAAAGACAAT+TGG | 0.476811 | 4_2:-46831800 | None:intergenic |
| AAAGAATTGACCAAAGACTT+TGG | 0.478011 | 4_2:-46832483 | None:intergenic |
| TTTCATGGAGAAGTATAGTT+GGG | 0.478641 | 4_2:+46832503 | Msa0602810:CDS |
| AAGAACGTCGATTTCGGAAG+GGG | 0.480454 | 4_2:-46831533 | None:intergenic |
| GTGTACAATCTCACTGGAAT+GGG | 0.480702 | 4_2:+46831640 | Msa0602810:CDS |
| ATGTTGGAGATGCAAATGTT+TGG | 0.481221 | 4_2:+46832436 | Msa0602810:CDS |
| CATTCAAAAGGAAGATGAGC+AGG | 0.483405 | 4_2:+46831936 | Msa0602810:CDS |
| AGTGTACAATCTCACTGGAA+TGG | 0.489642 | 4_2:+46831639 | Msa0602810:CDS |
| TGGGAAGTGATGAAAGATGT+TGG | 0.492482 | 4_2:+46832420 | Msa0602810:CDS |
| GTAGCTTGTGGTATGTGTTA+GGG | 0.507371 | 4_2:+46832310 | Msa0602810:CDS |
| GAGATCCCGTCGTTCAGTGT+TGG | 0.510257 | 4_2:-46831451 | None:intergenic |
| TCAGTGTTGGGGATGATTCG+CGG | 0.524299 | 4_2:-46831438 | None:intergenic |
| AGGAAACATATGTACAATGC+TGG | 0.524413 | 4_2:-46831193 | None:intergenic |
| GTAAAAGTGTACAATCTCAC+TGG | 0.529409 | 4_2:+46831634 | Msa0602810:CDS |
| GTGGTATGTGTTAGGGTACA+TGG | 0.531641 | 4_2:+46832317 | Msa0602810:CDS |
| AATCTAATATGTAACACTCT+TGG | 0.533209 | 4_2:-46831246 | None:intergenic |
| CATCCCCAACACTGAACGAC+GGG | 0.534315 | 4_2:+46831446 | Msa0602810:CDS |
| CAAAAGAATCGCACAACCGC+CGG | 0.537549 | 4_2:-46831818 | None:intergenic |
| GCCGATTCCGGAACTTACAA+TGG | 0.540306 | 4_2:-46831380 | None:intergenic |
| CGACGATAAAGAAGGAAGAA+TGG | 0.540309 | 4_2:-46831578 | None:intergenic |
| GAATCGCACAACCGCCGGAA+CGG | 0.546735 | 4_2:-46831813 | None:intergenic |
| ACACTTCTGCTGGTAGCTTG+TGG | 0.556818 | 4_2:+46832298 | Msa0602810:CDS |
| TTCCTGACTTTCTCAAGTGA+AGG | 0.560019 | 4_2:+46832559 | Msa0602810:CDS |
| GAACGACGGGATCTCTGAGA+TGG | 0.560538 | 4_2:+46831459 | Msa0602810:CDS |
| ATGATTCGCGACGATAAAGA+AGG | 0.561187 | 4_2:-46831586 | None:intergenic |
| GATCCCGTCGTTCAGTGTTG+GGG | 0.565462 | 4_2:-46831449 | None:intergenic |
| CTTAGTCCAAATTGGTACAC+TGG | 0.575705 | 4_2:+46831754 | Msa0602810:CDS |
| AAAAGGAAGATGAGCAGGGT+AGG | 0.584974 | 4_2:+46831941 | Msa0602810:CDS |
| TCTTCTAAGTCTTCAACTGG+TGG | 0.587214 | 4_2:+46832117 | Msa0602810:CDS |
| ACAAGAACGTCGATTTCGGA+AGG | 0.590305 | 4_2:-46831535 | None:intergenic |
| CCAACACAAGATAGAATGCT+AGG | 0.591818 | 4_2:+46831283 | Msa0602810:CDS |
| GGGAAATCGCTGATCTAGCA+AGG | 0.595724 | 4_2:-46831513 | None:intergenic |
| TAGTTGGGTCAATGAAGTTG+AGG | 0.600109 | 4_2:+46832518 | Msa0602810:CDS |
| GAATTGACCAAAGACTTTGG+TGG | 0.608452 | 4_2:-46832480 | None:intergenic |
| CTGCTTTACCTCCTGTGTGG+AGG | 0.626786 | 4_2:-46832194 | None:intergenic |
| AACGGAAAAGACAATTGGCT+AGG | 0.628055 | 4_2:-46831795 | None:intergenic |
| CAAGAACGTCGATTTCGGAA+GGG | 0.628510 | 4_2:-46831534 | None:intergenic |
| GAAGTACATAAAGTAAAGAG+AGG | 0.630019 | 4_2:-46831171 | None:intergenic |
| AAGAGTCTTCTCTTGCGCCG+TGG | 0.637122 | 4_2:-46831903 | None:intergenic |
| GAAACTATACGATCAAAAGA+GGG | 0.642105 | 4_2:+46831222 | Msa0602810:CDS |
| TCACTGCTTTACCTCCTGTG+TGG | 0.651603 | 4_2:-46832197 | None:intergenic |
| TCATCCCCAACACTGAACGA+CGG | 0.690414 | 4_2:+46831445 | Msa0602810:CDS |
| ATTCAAAAGGAAGATGAGCA+GGG | 0.694442 | 4_2:+46831937 | Msa0602810:CDS |
| TGTTTAGTACGAACGCACCA+CGG | 0.710347 | 4_2:+46831886 | Msa0602810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGTACATATGTTTCCTAATT+TGG | + | chr4_2:46831200-46831219 | Msa0602810:CDS | 25.0% |
| ! | AATCTAATATGTAACACTCT+TGG | - | chr4_2:46831249-46831268 | None:intergenic | 25.0% |
| ! | AATCAAAAGAACCAAGAATT+TGG | + | chr4_2:46831327-46831346 | Msa0602810:CDS | 25.0% |
| ! | ATCAAAAGAACCAAGAATTT+GGG | + | chr4_2:46831328-46831347 | Msa0602810:CDS | 25.0% |
| !! | AAGAAATAAGTTAGCACTTT+TGG | + | chr4_2:46831717-46831736 | Msa0602810:CDS | 25.0% |
| ! | TTACAATTGTTGCATTCAAA+AGG | + | chr4_2:46831924-46831943 | Msa0602810:CDS | 25.0% |
| ! | AAGTCTTTGTTGACAATTTA+AGG | + | chr4_2:46832007-46832026 | Msa0602810:CDS | 25.0% |
| ! | AGTCTTTGTTGACAATTTAA+GGG | + | chr4_2:46832008-46832027 | Msa0602810:CDS | 25.0% |
| ! | TCACCATTAAATTTCAAAAC+TGG | + | chr4_2:46832156-46832175 | Msa0602810:CDS | 25.0% |
| !!! | ACACCAGTTTTGAAATTTAA+TGG | - | chr4_2:46832162-46832181 | None:intergenic | 25.0% |
| !! | AGGGTTTTTATGATAAGTTT+TGG | + | chr4_2:46832369-46832388 | Msa0602810:CDS | 25.0% |
| ! | TGTACATATGTTTCCTAATT+TGG | + | chr4_2:46831200-46831219 | Msa0602810:CDS | 25.0% |
| ! | AATCTAATATGTAACACTCT+TGG | - | chr4_2:46831249-46831268 | None:intergenic | 25.0% |
| ! | AATCAAAAGAACCAAGAATT+TGG | + | chr4_2:46831327-46831346 | Msa0602810:CDS | 25.0% |
| ! | ATCAAAAGAACCAAGAATTT+GGG | + | chr4_2:46831328-46831347 | Msa0602810:CDS | 25.0% |
| !! | AAGAAATAAGTTAGCACTTT+TGG | + | chr4_2:46831717-46831736 | Msa0602810:CDS | 25.0% |
| ! | TTACAATTGTTGCATTCAAA+AGG | + | chr4_2:46831924-46831943 | Msa0602810:CDS | 25.0% |
| ! | AAGTCTTTGTTGACAATTTA+AGG | + | chr4_2:46832007-46832026 | Msa0602810:CDS | 25.0% |
| ! | AGTCTTTGTTGACAATTTAA+GGG | + | chr4_2:46832008-46832027 | Msa0602810:CDS | 25.0% |
| ! | TCACCATTAAATTTCAAAAC+TGG | + | chr4_2:46832156-46832175 | Msa0602810:CDS | 25.0% |
| !!! | ACACCAGTTTTGAAATTTAA+TGG | - | chr4_2:46832162-46832181 | None:intergenic | 25.0% |
| !! | AGGGTTTTTATGATAAGTTT+TGG | + | chr4_2:46832369-46832388 | Msa0602810:CDS | 25.0% |
| GAAGTACATAAAGTAAAGAG+AGG | - | chr4_2:46831174-46831193 | None:intergenic | 30.0% | |
| GATCGTATAGTTTCCAAATT+AGG | - | chr4_2:46831216-46831235 | None:intergenic | 30.0% | |
| GAAACTATACGATCAAAAGA+GGG | + | chr4_2:46831222-46831241 | Msa0602810:CDS | 30.0% | |
| !!! | CAGTATGCTTCTGTTTTTTA+AGG | - | chr4_2:46831857-46831876 | None:intergenic | 30.0% |
| !! | TTTATGATAAGTTTTGGTGC+TGG | + | chr4_2:46832375-46832394 | Msa0602810:CDS | 30.0% |
| TCAAATGCAATAGTTGTTTG+TGG | + | chr4_2:46832400-46832419 | Msa0602810:CDS | 30.0% | |
| CAAATGCAATAGTTGTTTGT+GGG | + | chr4_2:46832401-46832420 | Msa0602810:CDS | 30.0% | |
| TAATTATCCACCAAAGTCTT+TGG | + | chr4_2:46832473-46832492 | Msa0602810:CDS | 30.0% | |
| AAAGAATTGACCAAAGACTT+TGG | - | chr4_2:46832486-46832505 | None:intergenic | 30.0% | |
| ! | TTTCATGGAGAAGTATAGTT+GGG | + | chr4_2:46832503-46832522 | Msa0602810:CDS | 30.0% |
| GAAGTACATAAAGTAAAGAG+AGG | - | chr4_2:46831174-46831193 | None:intergenic | 30.0% | |
| GATCGTATAGTTTCCAAATT+AGG | - | chr4_2:46831216-46831235 | None:intergenic | 30.0% | |
| GAAACTATACGATCAAAAGA+GGG | + | chr4_2:46831222-46831241 | Msa0602810:CDS | 30.0% | |
| !!! | CAGTATGCTTCTGTTTTTTA+AGG | - | chr4_2:46831857-46831876 | None:intergenic | 30.0% |
| !! | TTTATGATAAGTTTTGGTGC+TGG | + | chr4_2:46832375-46832394 | Msa0602810:CDS | 30.0% |
| TCAAATGCAATAGTTGTTTG+TGG | + | chr4_2:46832400-46832419 | Msa0602810:CDS | 30.0% | |
| CAAATGCAATAGTTGTTTGT+GGG | + | chr4_2:46832401-46832420 | Msa0602810:CDS | 30.0% | |
| TAATTATCCACCAAAGTCTT+TGG | + | chr4_2:46832473-46832492 | Msa0602810:CDS | 30.0% | |
| AAAGAATTGACCAAAGACTT+TGG | - | chr4_2:46832486-46832505 | None:intergenic | 30.0% | |
| ! | TTTCATGGAGAAGTATAGTT+GGG | + | chr4_2:46832503-46832522 | Msa0602810:CDS | 30.0% |
| AGGAAACATATGTACAATGC+TGG | - | chr4_2:46831196-46831215 | None:intergenic | 35.0% | |
| GGAAACTATACGATCAAAAG+AGG | + | chr4_2:46831221-46831240 | Msa0602810:CDS | 35.0% | |
| ! | GTAAAAGTGTACAATCTCAC+TGG | + | chr4_2:46831634-46831653 | Msa0602810:CDS | 35.0% |
| ATTCAAAAGGAAGATGAGCA+GGG | + | chr4_2:46831937-46831956 | Msa0602810:CDS | 35.0% | |
| !! | GTAGGCTTGGTTTTCATTTA+GGG | + | chr4_2:46831959-46831978 | Msa0602810:CDS | 35.0% |
| !!! | AGACTTTTGTTGCTGCTTTT+GGG | - | chr4_2:46831993-46832012 | None:intergenic | 35.0% |
| !!! | AAGACTTTTGTTGCTGCTTT+TGG | - | chr4_2:46831994-46832013 | None:intergenic | 35.0% |
| ! | ACCCAAAATTTTGCCAACAA+GGG | + | chr4_2:46832038-46832057 | Msa0602810:CDS | 35.0% |
| ! | TCCCTTGTTGGCAAAATTTT+GGG | - | chr4_2:46832042-46832061 | None:intergenic | 35.0% |
| ! | TTCCCTTGTTGGCAAAATTT+TGG | - | chr4_2:46832043-46832062 | None:intergenic | 35.0% |
| AGTTCTTCTAAGTCTTCAAC+TGG | + | chr4_2:46832114-46832133 | Msa0602810:CDS | 35.0% | |
| AAAGCAGTGATTGATGGAAT+TGG | + | chr4_2:46832210-46832229 | Msa0602810:CDS | 35.0% | |
| ! | AGAATGACACTACATCGTTT+TGG | + | chr4_2:46832273-46832292 | Msa0602810:CDS | 35.0% |
| GCAAAAAAGAGGCTCAAAAA+AGG | + | chr4_2:46832342-46832361 | Msa0602810:CDS | 35.0% | |
| ATGTTGGAGATGCAAATGTT+TGG | + | chr4_2:46832436-46832455 | Msa0602810:CDS | 35.0% | |
| TGTTGGAGATGCAAATGTTT+GGG | + | chr4_2:46832437-46832456 | Msa0602810:CDS | 35.0% | |
| GTCTTTGGTCAATTCTTTCA+TGG | + | chr4_2:46832488-46832507 | Msa0602810:CDS | 35.0% | |
| ! | CTTTCATGGAGAAGTATAGT+TGG | + | chr4_2:46832502-46832521 | Msa0602810:CDS | 35.0% |
| TCAGGAAGATCATAGTTGTT+AGG | - | chr4_2:46832546-46832565 | None:intergenic | 35.0% | |
| AGGAAACATATGTACAATGC+TGG | - | chr4_2:46831196-46831215 | None:intergenic | 35.0% | |
| GGAAACTATACGATCAAAAG+AGG | + | chr4_2:46831221-46831240 | Msa0602810:CDS | 35.0% | |
| ! | GTAAAAGTGTACAATCTCAC+TGG | + | chr4_2:46831634-46831653 | Msa0602810:CDS | 35.0% |
| ATTCAAAAGGAAGATGAGCA+GGG | + | chr4_2:46831937-46831956 | Msa0602810:CDS | 35.0% | |
| !! | GTAGGCTTGGTTTTCATTTA+GGG | + | chr4_2:46831959-46831978 | Msa0602810:CDS | 35.0% |
| !!! | AGACTTTTGTTGCTGCTTTT+GGG | - | chr4_2:46831993-46832012 | None:intergenic | 35.0% |
| !!! | AAGACTTTTGTTGCTGCTTT+TGG | - | chr4_2:46831994-46832013 | None:intergenic | 35.0% |
| ! | ACCCAAAATTTTGCCAACAA+GGG | + | chr4_2:46832038-46832057 | Msa0602810:CDS | 35.0% |
| ! | TCCCTTGTTGGCAAAATTTT+GGG | - | chr4_2:46832042-46832061 | None:intergenic | 35.0% |
| ! | TTCCCTTGTTGGCAAAATTT+TGG | - | chr4_2:46832043-46832062 | None:intergenic | 35.0% |
| AGTTCTTCTAAGTCTTCAAC+TGG | + | chr4_2:46832114-46832133 | Msa0602810:CDS | 35.0% | |
| AAAGCAGTGATTGATGGAAT+TGG | + | chr4_2:46832210-46832229 | Msa0602810:CDS | 35.0% | |
| ! | AGAATGACACTACATCGTTT+TGG | + | chr4_2:46832273-46832292 | Msa0602810:CDS | 35.0% |
| GCAAAAAAGAGGCTCAAAAA+AGG | + | chr4_2:46832342-46832361 | Msa0602810:CDS | 35.0% | |
| ATGTTGGAGATGCAAATGTT+TGG | + | chr4_2:46832436-46832455 | Msa0602810:CDS | 35.0% | |
| TGTTGGAGATGCAAATGTTT+GGG | + | chr4_2:46832437-46832456 | Msa0602810:CDS | 35.0% | |
| GTCTTTGGTCAATTCTTTCA+TGG | + | chr4_2:46832488-46832507 | Msa0602810:CDS | 35.0% | |
| ! | CTTTCATGGAGAAGTATAGT+TGG | + | chr4_2:46832502-46832521 | Msa0602810:CDS | 35.0% |
| TCAGGAAGATCATAGTTGTT+AGG | - | chr4_2:46832546-46832565 | None:intergenic | 35.0% | |
| CCTAGCATTCTATCTTGTGT+TGG | - | chr4_2:46831286-46831305 | None:intergenic | 40.0% | |
| CCAACACAAGATAGAATGCT+AGG | + | chr4_2:46831283-46831302 | Msa0602810:CDS | 40.0% | |
| CTCATCTAGACCCAAATTCT+TGG | - | chr4_2:46831341-46831360 | None:intergenic | 40.0% | |
| CTCAAAGCCATTGTAAGTTC+CGG | + | chr4_2:46831373-46831392 | Msa0602810:CDS | 40.0% | |
| GCACCAAGAAACATCTTTGA+AGG | + | chr4_2:46831415-46831434 | Msa0602810:CDS | 40.0% | |
| CGACGATAAAGAAGGAAGAA+TGG | - | chr4_2:46831581-46831600 | None:intergenic | 40.0% | |
| ATGATTCGCGACGATAAAGA+AGG | - | chr4_2:46831589-46831608 | None:intergenic | 40.0% | |
| ! | CGTCGTGTCTCATTTTGTAA+CGG | - | chr4_2:46831615-46831634 | None:intergenic | 40.0% |
| AGTGTACAATCTCACTGGAA+TGG | + | chr4_2:46831639-46831658 | Msa0602810:CDS | 40.0% | |
| GTGTACAATCTCACTGGAAT+GGG | + | chr4_2:46831640-46831659 | Msa0602810:CDS | 40.0% | |
| CAGAGTCTCTTAGTCCAAAT+TGG | + | chr4_2:46831746-46831765 | Msa0602810:CDS | 40.0% | |
| CTTAGTCCAAATTGGTACAC+TGG | + | chr4_2:46831754-46831773 | Msa0602810:CDS | 40.0% | |
| TCATTGCCAGTGTACCAATT+TGG | - | chr4_2:46831763-46831782 | None:intergenic | 40.0% | |
| AACGGAAAAGACAATTGGCT+AGG | - | chr4_2:46831798-46831817 | None:intergenic | 40.0% | |
| CATTCAAAAGGAAGATGAGC+AGG | + | chr4_2:46831936-46831955 | Msa0602810:CDS | 40.0% | |
| !! | GGTAGGCTTGGTTTTCATTT+AGG | + | chr4_2:46831958-46831977 | Msa0602810:CDS | 40.0% |
| ! | CACCCAAAATTTTGCCAACA+AGG | + | chr4_2:46832037-46832056 | Msa0602810:CDS | 40.0% |
| AACCTAAGCAATTCCCTTGT+TGG | - | chr4_2:46832054-46832073 | None:intergenic | 40.0% | |
| TCTTCTAAGTCTTCAACTGG+TGG | + | chr4_2:46832117-46832136 | Msa0602810:CDS | 40.0% | |
| ! | GTAGCTTGTGGTATGTGTTA+GGG | + | chr4_2:46832310-46832329 | Msa0602810:CDS | 40.0% |
| GGTACATGGAAGCAAAAAAG+AGG | + | chr4_2:46832331-46832350 | Msa0602810:CDS | 40.0% | |
| AGAGGCTCAAAAAAGGTGAT+AGG | + | chr4_2:46832349-46832368 | Msa0602810:CDS | 40.0% | |
| GAGGCTCAAAAAAGGTGATA+GGG | + | chr4_2:46832350-46832369 | Msa0602810:CDS | 40.0% | |
| TGGGAAGTGATGAAAGATGT+TGG | + | chr4_2:46832420-46832439 | Msa0602810:CDS | 40.0% | |
| GAATTGACCAAAGACTTTGG+TGG | - | chr4_2:46832483-46832502 | None:intergenic | 40.0% | |
| TAGTTGGGTCAATGAAGTTG+AGG | + | chr4_2:46832518-46832537 | Msa0602810:CDS | 40.0% | |
| CCTAGCATTCTATCTTGTGT+TGG | - | chr4_2:46831286-46831305 | None:intergenic | 40.0% | |
| CCAACACAAGATAGAATGCT+AGG | + | chr4_2:46831283-46831302 | Msa0602810:CDS | 40.0% | |
| CTCATCTAGACCCAAATTCT+TGG | - | chr4_2:46831341-46831360 | None:intergenic | 40.0% | |
| CTCAAAGCCATTGTAAGTTC+CGG | + | chr4_2:46831373-46831392 | Msa0602810:CDS | 40.0% | |
| GCACCAAGAAACATCTTTGA+AGG | + | chr4_2:46831415-46831434 | Msa0602810:CDS | 40.0% | |
| CGACGATAAAGAAGGAAGAA+TGG | - | chr4_2:46831581-46831600 | None:intergenic | 40.0% | |
| ATGATTCGCGACGATAAAGA+AGG | - | chr4_2:46831589-46831608 | None:intergenic | 40.0% | |
| ! | CGTCGTGTCTCATTTTGTAA+CGG | - | chr4_2:46831615-46831634 | None:intergenic | 40.0% |
| AGTGTACAATCTCACTGGAA+TGG | + | chr4_2:46831639-46831658 | Msa0602810:CDS | 40.0% | |
| GTGTACAATCTCACTGGAAT+GGG | + | chr4_2:46831640-46831659 | Msa0602810:CDS | 40.0% | |
| CAGAGTCTCTTAGTCCAAAT+TGG | + | chr4_2:46831746-46831765 | Msa0602810:CDS | 40.0% | |
| CTTAGTCCAAATTGGTACAC+TGG | + | chr4_2:46831754-46831773 | Msa0602810:CDS | 40.0% | |
| TCATTGCCAGTGTACCAATT+TGG | - | chr4_2:46831763-46831782 | None:intergenic | 40.0% | |
| AACGGAAAAGACAATTGGCT+AGG | - | chr4_2:46831798-46831817 | None:intergenic | 40.0% | |
| CATTCAAAAGGAAGATGAGC+AGG | + | chr4_2:46831936-46831955 | Msa0602810:CDS | 40.0% | |
| !! | GGTAGGCTTGGTTTTCATTT+AGG | + | chr4_2:46831958-46831977 | Msa0602810:CDS | 40.0% |
| ! | CACCCAAAATTTTGCCAACA+AGG | + | chr4_2:46832037-46832056 | Msa0602810:CDS | 40.0% |
| AACCTAAGCAATTCCCTTGT+TGG | - | chr4_2:46832054-46832073 | None:intergenic | 40.0% | |
| TCTTCTAAGTCTTCAACTGG+TGG | + | chr4_2:46832117-46832136 | Msa0602810:CDS | 40.0% | |
| ! | GTAGCTTGTGGTATGTGTTA+GGG | + | chr4_2:46832310-46832329 | Msa0602810:CDS | 40.0% |
| GGTACATGGAAGCAAAAAAG+AGG | + | chr4_2:46832331-46832350 | Msa0602810:CDS | 40.0% | |
| AGAGGCTCAAAAAAGGTGAT+AGG | + | chr4_2:46832349-46832368 | Msa0602810:CDS | 40.0% | |
| GAGGCTCAAAAAAGGTGATA+GGG | + | chr4_2:46832350-46832369 | Msa0602810:CDS | 40.0% | |
| TGGGAAGTGATGAAAGATGT+TGG | + | chr4_2:46832420-46832439 | Msa0602810:CDS | 40.0% | |
| GAATTGACCAAAGACTTTGG+TGG | - | chr4_2:46832483-46832502 | None:intergenic | 40.0% | |
| TAGTTGGGTCAATGAAGTTG+AGG | + | chr4_2:46832518-46832537 | Msa0602810:CDS | 40.0% | |
| !! | CTTGTGTTGGCTTGTGACAT+TGG | - | chr4_2:46831273-46831292 | None:intergenic | 45.0% |
| ! | ATGCTAGGCACAGAGTTTTG+TGG | + | chr4_2:46831298-46831317 | Msa0602810:CDS | 45.0% |
| ! | CGGAACTTACAATGGCTTTG+AGG | - | chr4_2:46831375-46831394 | None:intergenic | 45.0% |
| GCCATTGTAAGTTCCGGAAT+CGG | + | chr4_2:46831379-46831398 | Msa0602810:CDS | 45.0% | |
| CGGCCTTCAAAGATGTTTCT+TGG | - | chr4_2:46831421-46831440 | None:intergenic | 45.0% | |
| !! | AAGAACGTCGATTTCGGAAG+GGG | - | chr4_2:46831536-46831555 | None:intergenic | 45.0% |
| !! | CAAGAACGTCGATTTCGGAA+GGG | - | chr4_2:46831537-46831556 | None:intergenic | 45.0% |
| !! | ACAAGAACGTCGATTTCGGA+AGG | - | chr4_2:46831538-46831557 | None:intergenic | 45.0% |
| !! | GACGACAAGAACGTCGATTT+CGG | - | chr4_2:46831542-46831561 | None:intergenic | 45.0% |
| ! | GCCAATTGTCTTTTCCGTTC+CGG | + | chr4_2:46831799-46831818 | Msa0602810:CDS | 45.0% |
| ! | AATTGTCTTTTCCGTTCCGG+CGG | + | chr4_2:46831802-46831821 | Msa0602810:CDS | 45.0% |
| TGTTTAGTACGAACGCACCA+CGG | + | chr4_2:46831886-46831905 | Msa0602810:CDS | 45.0% | |
| AAAAGGAAGATGAGCAGGGT+AGG | + | chr4_2:46831941-46831960 | Msa0602810:CDS | 45.0% | |
| TGCCAACAAGGGAATTGCTT+AGG | + | chr4_2:46832049-46832068 | Msa0602810:CDS | 45.0% | |
| !! | GATCATTTTTGCCTCCACAC+AGG | + | chr4_2:46832183-46832202 | Msa0602810:CDS | 45.0% |
| GGAGGTAAAGCAGTGATTGA+TGG | + | chr4_2:46832204-46832223 | Msa0602810:CDS | 45.0% | |
| ! | CGATGTAGTGTCATTCTTGC+AGG | - | chr4_2:46832270-46832289 | None:intergenic | 45.0% |
| !! | CGTTTTGGTAACACTTCTGC+TGG | + | chr4_2:46832288-46832307 | Msa0602810:CDS | 45.0% |
| ! | GGTAGCTTGTGGTATGTGTT+AGG | + | chr4_2:46832309-46832328 | Msa0602810:CDS | 45.0% |
| GTGGTATGTGTTAGGGTACA+TGG | + | chr4_2:46832317-46832336 | Msa0602810:CDS | 45.0% | |
| !! | CTTGTGTTGGCTTGTGACAT+TGG | - | chr4_2:46831273-46831292 | None:intergenic | 45.0% |
| ! | ATGCTAGGCACAGAGTTTTG+TGG | + | chr4_2:46831298-46831317 | Msa0602810:CDS | 45.0% |
| ! | CGGAACTTACAATGGCTTTG+AGG | - | chr4_2:46831375-46831394 | None:intergenic | 45.0% |
| GCCATTGTAAGTTCCGGAAT+CGG | + | chr4_2:46831379-46831398 | Msa0602810:CDS | 45.0% | |
| CGGCCTTCAAAGATGTTTCT+TGG | - | chr4_2:46831421-46831440 | None:intergenic | 45.0% | |
| !! | AAGAACGTCGATTTCGGAAG+GGG | - | chr4_2:46831536-46831555 | None:intergenic | 45.0% |
| !! | CAAGAACGTCGATTTCGGAA+GGG | - | chr4_2:46831537-46831556 | None:intergenic | 45.0% |
| !! | ACAAGAACGTCGATTTCGGA+AGG | - | chr4_2:46831538-46831557 | None:intergenic | 45.0% |
| !! | GACGACAAGAACGTCGATTT+CGG | - | chr4_2:46831542-46831561 | None:intergenic | 45.0% |
| ! | GCCAATTGTCTTTTCCGTTC+CGG | + | chr4_2:46831799-46831818 | Msa0602810:CDS | 45.0% |
| ! | AATTGTCTTTTCCGTTCCGG+CGG | + | chr4_2:46831802-46831821 | Msa0602810:CDS | 45.0% |
| TGTTTAGTACGAACGCACCA+CGG | + | chr4_2:46831886-46831905 | Msa0602810:CDS | 45.0% | |
| AAAAGGAAGATGAGCAGGGT+AGG | + | chr4_2:46831941-46831960 | Msa0602810:CDS | 45.0% | |
| TGCCAACAAGGGAATTGCTT+AGG | + | chr4_2:46832049-46832068 | Msa0602810:CDS | 45.0% | |
| !! | GATCATTTTTGCCTCCACAC+AGG | + | chr4_2:46832183-46832202 | Msa0602810:CDS | 45.0% |
| GGAGGTAAAGCAGTGATTGA+TGG | + | chr4_2:46832204-46832223 | Msa0602810:CDS | 45.0% | |
| ! | CGATGTAGTGTCATTCTTGC+AGG | - | chr4_2:46832270-46832289 | None:intergenic | 45.0% |
| !! | CGTTTTGGTAACACTTCTGC+TGG | + | chr4_2:46832288-46832307 | Msa0602810:CDS | 45.0% |
| ! | GGTAGCTTGTGGTATGTGTT+AGG | + | chr4_2:46832309-46832328 | Msa0602810:CDS | 45.0% |
| GTGGTATGTGTTAGGGTACA+TGG | + | chr4_2:46832317-46832336 | Msa0602810:CDS | 45.0% | |
| ! | GCCGATTCCGGAACTTACAA+TGG | - | chr4_2:46831383-46831402 | None:intergenic | 50.0% |
| !! | GTAAGTTTGCTCGCCGATTC+CGG | - | chr4_2:46831395-46831414 | None:intergenic | 50.0% |
| ! | TCAGTGTTGGGGATGATTCG+CGG | - | chr4_2:46831441-46831460 | None:intergenic | 50.0% |
| TCATCCCCAACACTGAACGA+CGG | + | chr4_2:46831445-46831464 | Msa0602810:CDS | 50.0% | |
| AGATCCCGTCGTTCAGTGTT+GGG | - | chr4_2:46831453-46831472 | None:intergenic | 50.0% | |
| GGGAAATCGCTGATCTAGCA+AGG | - | chr4_2:46831516-46831535 | None:intergenic | 50.0% | |
| GCCGGAACGGAAAAGACAAT+TGG | - | chr4_2:46831803-46831822 | None:intergenic | 50.0% | |
| CAAAAGAATCGCACAACCGC+CGG | - | chr4_2:46831821-46831840 | None:intergenic | 50.0% | |
| ! | CATTTTTGCCTCCACACAGG+AGG | + | chr4_2:46832186-46832205 | Msa0602810:CDS | 50.0% |
| TCACTGCTTTACCTCCTGTG+TGG | - | chr4_2:46832200-46832219 | None:intergenic | 50.0% | |
| ACACTTCTGCTGGTAGCTTG+TGG | + | chr4_2:46832298-46832317 | Msa0602810:CDS | 50.0% | |
| ! | GCCGATTCCGGAACTTACAA+TGG | - | chr4_2:46831383-46831402 | None:intergenic | 50.0% |
| !! | GTAAGTTTGCTCGCCGATTC+CGG | - | chr4_2:46831395-46831414 | None:intergenic | 50.0% |
| ! | TCAGTGTTGGGGATGATTCG+CGG | - | chr4_2:46831441-46831460 | None:intergenic | 50.0% |
| TCATCCCCAACACTGAACGA+CGG | + | chr4_2:46831445-46831464 | Msa0602810:CDS | 50.0% | |
| AGATCCCGTCGTTCAGTGTT+GGG | - | chr4_2:46831453-46831472 | None:intergenic | 50.0% | |
| GGGAAATCGCTGATCTAGCA+AGG | - | chr4_2:46831516-46831535 | None:intergenic | 50.0% | |
| GCCGGAACGGAAAAGACAAT+TGG | - | chr4_2:46831803-46831822 | None:intergenic | 50.0% | |
| CAAAAGAATCGCACAACCGC+CGG | - | chr4_2:46831821-46831840 | None:intergenic | 50.0% | |
| ! | CATTTTTGCCTCCACACAGG+AGG | + | chr4_2:46832186-46832205 | Msa0602810:CDS | 50.0% |
| TCACTGCTTTACCTCCTGTG+TGG | - | chr4_2:46832200-46832219 | None:intergenic | 50.0% | |
| ACACTTCTGCTGGTAGCTTG+TGG | + | chr4_2:46832298-46832317 | Msa0602810:CDS | 50.0% | |
| CATCCCCAACACTGAACGAC+GGG | + | chr4_2:46831446-46831465 | Msa0602810:CDS | 55.0% | |
| GATCCCGTCGTTCAGTGTTG+GGG | - | chr4_2:46831452-46831471 | None:intergenic | 55.0% | |
| GAGATCCCGTCGTTCAGTGT+TGG | - | chr4_2:46831454-46831473 | None:intergenic | 55.0% | |
| ! | GAACGACGGGATCTCTGAGA+TGG | + | chr4_2:46831459-46831478 | Msa0602810:CDS | 55.0% |
| AAGAGTCTTCTCTTGCGCCG+TGG | - | chr4_2:46831906-46831925 | None:intergenic | 55.0% | |
| GAAGATGAGCAGGGTAGGCT+TGG | + | chr4_2:46831946-46831965 | Msa0602810:CDS | 55.0% | |
| CTGCTTTACCTCCTGTGTGG+AGG | - | chr4_2:46832197-46832216 | None:intergenic | 55.0% | |
| CATCCCCAACACTGAACGAC+GGG | + | chr4_2:46831446-46831465 | Msa0602810:CDS | 55.0% | |
| GATCCCGTCGTTCAGTGTTG+GGG | - | chr4_2:46831452-46831471 | None:intergenic | 55.0% | |
| GAGATCCCGTCGTTCAGTGT+TGG | - | chr4_2:46831454-46831473 | None:intergenic | 55.0% | |
| ! | GAACGACGGGATCTCTGAGA+TGG | + | chr4_2:46831459-46831478 | Msa0602810:CDS | 55.0% |
| AAGAGTCTTCTCTTGCGCCG+TGG | - | chr4_2:46831906-46831925 | None:intergenic | 55.0% | |
| GAAGATGAGCAGGGTAGGCT+TGG | + | chr4_2:46831946-46831965 | Msa0602810:CDS | 55.0% | |
| CTGCTTTACCTCCTGTGTGG+AGG | - | chr4_2:46832197-46832216 | None:intergenic | 55.0% | |
| GAATCGCACAACCGCCGGAA+CGG | - | chr4_2:46831816-46831835 | None:intergenic | 60.0% | |
| GAATCGCACAACCGCCGGAA+CGG | - | chr4_2:46831816-46831835 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 46831163 | 46832578 | 46831163 | ID=Msa0602810;Name=Msa0602810 |
| chr4_2 | mRNA | 46831163 | 46832578 | 46831163 | ID=Msa0602810-mRNA-1;Parent=Msa0602810;Name=Msa0602810-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|471 |
| chr4_2 | exon | 46831163 | 46832578 | 46831163 | ID=Msa0602810-mRNA-1:exon:10680;Parent=Msa0602810-mRNA-1 |
| chr4_2 | CDS | 46831163 | 46832578 | 46831163 | ID=Msa0602810-mRNA-1:cds;Parent=Msa0602810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
