AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0508030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0508030 MtrunA17_Chr3g0112251 96.429 224 8 0 1 224 1 224 2.29e-155 429
Msa0508030 MtrunA17_Chr5g0398981 37.398 123 71 3 101 223 106 222 2.04e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0508030 AT2G44920.2 86.286 175 24 0 50 224 50 224 1.42e-107 309
Msa0508030 AT2G44920.1 86.232 138 19 0 50 187 50 187 1.53e-79 237
Msa0508030 AT1G12250.2 34.848 132 75 4 97 223 41 166 1.42e-11 62.0
Msa0508030 AT1G12250.1 34.848 132 75 4 97 223 115 240 2.05e-11 62.4
Msa0508030 AT5G55000.2 37.838 111 65 1 94 200 174 284 5.77e-11 61.2

Find 51 sgRNAs with CRISPR-Local

Find 622 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTAGGGGACAAGATCTTTC+TGG 0.219620 3_4:-55764203 Msa0508030:CDS
AAATTTGAGCAATGCTAATT+TGG 0.246193 3_4:-55760002 Msa0508030:CDS
CATACCGGCGCCTGTAATAT+TGG 0.263857 3_4:+55759940 None:intergenic
TTTAAAGGTGCAAAATTGTT+AGG 0.294153 3_4:-55760795 Msa0508030:CDS
TTCTTTGATGCTGATTTAAC+AGG 0.300432 3_4:-55760765 Msa0508030:intron
AAAATTGGCTTGACGCAGTA+TGG 0.314554 3_4:+55760815 None:intergenic
TGATCCTGCACTTGCATTCA+AGG 0.327062 3_4:-55764545 Msa0508030:intron
TTTAAGGGATCCAATATTAC+AGG 0.328394 3_4:-55759950 Msa0508030:CDS
GATGCTTGGTGAGTTTGCTT+TGG 0.375494 3_4:+55764649 None:intergenic
TAAGAGATGGTGATGAGGTT+TGG 0.381918 3_4:+55764816 None:intergenic
AGAAAGAGGAGTTGGTGAGC+AGG 0.384317 3_4:+55764771 None:intergenic
CATATGGTCAAGGAGTTACT+AGG 0.385923 3_4:-55764220 Msa0508030:CDS
TGGTGATGAATGCAGGGTGG+AGG 0.398777 3_4:-55764245 Msa0508030:intron
CTAGTAACTCCTTGACCATA+TGG 0.403791 3_4:+55764221 None:intergenic
CATGTCAGGTGCTGATCTTT+CGG 0.407019 3_4:-55760650 Msa0508030:intron
TTGGAAGGTGCACTTGTAAC+GGG 0.417101 3_4:-55759983 Msa0508030:CDS
CTAGGGGACAAGATCTTTCT+GGG 0.423220 3_4:-55764202 Msa0508030:CDS
GACAGAGTGAACTCATCAAC+TGG 0.437998 3_4:-55757757 Msa0508030:intron
AACCTCATCACCATCTCTTA+AGG 0.447203 3_4:-55764813 Msa0508030:CDS
AGTTGGTGAGCAGGTTGAAG+AGG 0.476682 3_4:+55764780 None:intergenic
ATGCAGGGTGGAGGGCCATA+TGG 0.478492 3_4:-55764236 Msa0508030:intron
TTACCTTTGTCACATTTGCC+AGG 0.489767 3_4:+55760599 None:intergenic
GGTGAGCAGGTTGAAGAGGA+AGG 0.497485 3_4:+55764784 None:intergenic
CAGAAACTCACATTATCATT+CGG 0.504813 3_4:-55764625 Msa0508030:CDS
TTTGGAAGGTGCACTTGTAA+CGG 0.505123 3_4:-55759984 Msa0508030:CDS
TTGAGCAATGCTAATTTGGA+AGG 0.506866 3_4:-55759998 Msa0508030:CDS
ATCAATCTATCATGCGGATG+TGG 0.515784 3_4:+55764923 None:intergenic
TACCTCTGCAAAATTGCTGA+TGG 0.538634 3_4:-55757863 Msa0508030:CDS
AATTGCACAGCAATGTATCA+CGG 0.554496 3_4:+55757725 None:intergenic
ACCTCTGCAAAATTGCTGAT+GGG 0.554917 3_4:-55757862 Msa0508030:intron
ATATGGTCAAGGAGTTACTA+GGG 0.565044 3_4:-55764219 Msa0508030:CDS
TATACCTTGAATGCAAGTGC+AGG 0.570494 3_4:+55764541 None:intergenic
GGTGATGAATGCAGGGTGGA+GGG 0.574556 3_4:-55764244 Msa0508030:intron
TATAATGTATATCATGTCAA+AGG 0.577746 3_4:-55757632 Msa0508030:three_prime_UTR
ATTGCACAGCAATGTATCAC+GGG 0.579298 3_4:+55757726 None:intergenic
GGATCCAATATTACAGGCGC+CGG 0.582010 3_4:-55759944 Msa0508030:intron
GGTGGAGGGCCATATGGTCA+AGG 0.584439 3_4:-55764230 Msa0508030:CDS
TACCTTTGTCACATTTGCCA+GGG 0.587787 3_4:+55760600 None:intergenic
TTCCCTGGCAAATGTGACAA+AGG 0.601317 3_4:-55760602 Msa0508030:intron
ATGCGGATGTGGAATTATTG+TGG 0.607522 3_4:+55764934 None:intergenic
ATGTGAGTTTCTGAGATGCT+TGG 0.612261 3_4:+55764635 None:intergenic
CTTTCTGGGAAAGATTTCAG+TGG 0.615907 3_4:-55764188 Msa0508030:CDS
CATCAAGCAAGACTTCAAAA+CGG 0.635311 3_4:-55764156 Msa0508030:intron
AAGGTGTTGACCTTAAGAGA+TGG 0.643063 3_4:+55764803 None:intergenic
TTTGGAAGTTGAATGCAAAG+AGG 0.643801 3_4:+55764834 None:intergenic
GACCTTAAGAGATGGTGATG+AGG 0.653487 3_4:+55764811 None:intergenic
TAGCTGTAACTATCCAACAA+TGG 0.657950 3_4:-55764872 Msa0508030:exon
ACACATATCAATCTATCATG+CGG 0.666603 3_4:+55764917 None:intergenic
GCACAGCAATGTATCACGGG+TGG 0.671947 3_4:+55757729 None:intergenic
TCACGTTGATCTTCTCTGAG+CGG 0.674168 3_4:+55757887 None:intergenic
TATGGTCAAGGAGTTACTAG+GGG 0.721516 3_4:-55764218 Msa0508030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATTTTATTTTTTA+TGG - chr3_4:55763367-55763386 Msa0508030:intron 0.0%
!! GTTAAGAAATTAAATTAAAA+TGG - chr3_4:55762224-55762243 Msa0508030:intron 10.0%
!!! TATAGTATTTTTATATAAGT+TGG + chr3_4:55762762-55762781 None:intergenic 10.0%
!! AACTTATATAAAAATACTAT+AGG - chr3_4:55762761-55762780 Msa0508030:intron 10.0%
!!! TTTTTGAAACAAAATATTAA+AGG - chr3_4:55763728-55763747 Msa0508030:intron 10.0%
!!! ATGTTTTGTTATTTATTTAT+TGG - chr3_4:55764377-55764396 Msa0508030:intron 10.0%
!! ATATATATTATATGTCTAAA+TGG - chr3_4:55764653-55764672 Msa0508030:CDS 10.0%
!!! TTTTTTGGTTAACAAATAAT+GGG - chr3_4:55758213-55758232 Msa0508030:intron 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr3_4:55760711-55760730 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr3_4:55760710-55760729 Msa0508030:intron 15.0%
!! GTTAATAAACTGAATTATAT+TGG + chr3_4:55762007-55762026 None:intergenic 15.0%
!! TATAAGTATAACTGTTTATT+AGG + chr3_4:55762151-55762170 None:intergenic 15.0%
!! TTCTTCAAATAATATAACAA+AGG + chr3_4:55762178-55762197 None:intergenic 15.0%
!!! TTAATTTCTTAACATTCTTT+TGG + chr3_4:55762217-55762236 None:intergenic 15.0%
!! TAGTTATGTTAATTAGTTAA+AGG - chr3_4:55762701-55762720 Msa0508030:intron 15.0%
!!! ATTAAAATCTAATTCAAGTT+GGG + chr3_4:55763335-55763354 None:intergenic 15.0%
!! TATTAAAATCTAATTCAAGT+TGG + chr3_4:55763336-55763355 None:intergenic 15.0%
!!! ACTTGAATTAGATTTTAATA+TGG - chr3_4:55763336-55763355 Msa0508030:intron 15.0%
!! ACAATTGAAGAAAAATTATA+AGG + chr3_4:55763890-55763909 None:intergenic 15.0%
!!! GTTAAAGTTTTGTTCTTTTT+TGG - chr3_4:55758198-55758217 Msa0508030:intron 20.0%
!!! CTTTTTTGGTTAACAAATAA+TGG - chr3_4:55758212-55758231 Msa0508030:intron 20.0%
!!! TTTATTAGGTTGTTGAATAA+TGG + chr3_4:55762137-55762156 None:intergenic 20.0%
!! TTGTTAATTACAGATATTTG+AGG + chr3_4:55762409-55762428 None:intergenic 20.0%
!! ATATTATTCTATGCTACTAT+TGG - chr3_4:55762584-55762603 Msa0508030:intron 20.0%
!! TTACTAATTCTATTAAGATC+AGG + chr3_4:55762915-55762934 None:intergenic 20.0%
!!! TCTTAATTTGATGAAATTTC+TGG + chr3_4:55762970-55762989 None:intergenic 20.0%
!!! AGTAAACTTGCAATAAATTT+TGG - chr3_4:55763158-55763177 Msa0508030:intron 20.0%
!! ATAAGAAAGTAAATTCAATG+TGG + chr3_4:55764279-55764298 None:intergenic 20.0%
!! ACATTGAATTTACTTTCTTA+TGG - chr3_4:55764278-55764297 Msa0508030:intron 20.0%
!! TATAATGTATATCATGTCAA+AGG - chr3_4:55764856-55764875 Msa0508030:CDS 20.0%
!!! AGTTTAAGTTGATTTGATGA+CGG - chr3_4:55758390-55758409 Msa0508030:intron 25.0%
! ATGTAGTGAAAAATAAGCAA+GGG - chr3_4:55758624-55758643 Msa0508030:intron 25.0%
! AAGATATTGTGGATGTTAAA+AGG - chr3_4:55758921-55758940 Msa0508030:intron 25.0%
!! AACACCTTAAAGTAAAGTTT+TGG - chr3_4:55759035-55759054 Msa0508030:intron 25.0%
!! ACACCTTAAAGTAAAGTTTT+GGG - chr3_4:55759036-55759055 Msa0508030:intron 25.0%
! TTAATTCAGGATATTCCATT+AGG - chr3_4:55759073-55759092 Msa0508030:intron 25.0%
!! AGAAAAATCTTTTCTCCTAA+TGG + chr3_4:55759091-55759110 None:intergenic 25.0%
!! TTAGGAGAAAAGATTTTTCT+AGG - chr3_4:55759091-55759110 Msa0508030:intron 25.0%
!! TTCCATCTTAGATTTTTCAT+CGG - chr3_4:55759207-55759226 Msa0508030:intron 25.0%
! CTTATATTTATCCCAAGTTT+CGG + chr3_4:55759740-55759759 None:intergenic 25.0%
! TTCCACAACTTATTTAATGA+AGG - chr3_4:55759985-55760004 Msa0508030:CDS 25.0%
! ATCCTTCATTAAATAAGTTG+TGG + chr3_4:55759990-55760009 None:intergenic 25.0%
! GTTCTTATAGATTGGAATTA+AGG + chr3_4:55760265-55760284 None:intergenic 25.0%
! AATTCCAATCTATAAGAACA+AGG - chr3_4:55760266-55760285 Msa0508030:intron 25.0%
! ATTCCAATCTATAAGAACAA+GGG - chr3_4:55760267-55760286 Msa0508030:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr3_4:55760703-55760722 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr3_4:55760704-55760723 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr3_4:55761312-55761331 Msa0508030:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr3_4:55761447-55761466 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr3_4:55761454-55761473 Msa0508030:intron 25.0%
! GTTCTATCAAATACCATATT+TGG + chr3_4:55761494-55761513 None:intergenic 25.0%
! TGGTATTTGATAGAACATTA+TGG - chr3_4:55761498-55761517 Msa0508030:intron 25.0%
! TATTTGATAGAACATTATGG+CGG - chr3_4:55761501-55761520 Msa0508030:intron 25.0%
!!! CAATTTTGCACCTTTAAAAT+TGG + chr3_4:55761691-55761710 None:intergenic 25.0%
!! TTTAAAGGTGCAAAATTGTT+AGG - chr3_4:55761693-55761712 Msa0508030:intron 25.0%
!! CATTCATTGTGATACATTTT+TGG + chr3_4:55761760-55761779 None:intergenic 25.0%
!! TTTTTCATGCTCATTATGAT+AGG - chr3_4:55761916-55761935 Msa0508030:intron 25.0%
! ACTGAATTATATTGGACTAA+GGG + chr3_4:55761999-55762018 None:intergenic 25.0%
! AACTGAATTATATTGGACTA+AGG + chr3_4:55762000-55762019 None:intergenic 25.0%
! ATAACAACAAAGCAAAGAAA+AGG + chr3_4:55762037-55762056 None:intergenic 25.0%
!!! ATTAAGCAAAGTTTTGAACA+AGG + chr3_4:55762063-55762082 None:intergenic 25.0%
! TCAGCTAAATTAATACTTGT+AGG + chr3_4:55762373-55762392 None:intergenic 25.0%
! CAACACAATAAATTGAGAAA+TGG + chr3_4:55762445-55762464 None:intergenic 25.0%
! CATTTCTCAATTTATTGTGT+TGG - chr3_4:55762443-55762462 Msa0508030:intron 25.0%
! AAATTTGAGCAATGCTAATT+TGG - chr3_4:55762486-55762505 Msa0508030:intron 25.0%
!! ATGCTACTATTGGAATTTTA+AGG - chr3_4:55762594-55762613 Msa0508030:intron 25.0%
!! TGCTACTATTGGAATTTTAA+GGG - chr3_4:55762595-55762614 Msa0508030:intron 25.0%
!!! ATTAGCTTTCAAATCATTGA+AGG - chr3_4:55762643-55762662 Msa0508030:intron 25.0%
!!! TATTGACATAGAACTGATTT+TGG - chr3_4:55762729-55762748 Msa0508030:intron 25.0%
!! TAAAAATACTATAGGAGCAT+AGG - chr3_4:55762769-55762788 Msa0508030:intron 25.0%
!! AAAAATACTATAGGAGCATA+GGG - chr3_4:55762770-55762789 Msa0508030:intron 25.0%
! TATTAAGATCAGGATTTACA+GGG + chr3_4:55762905-55762924 None:intergenic 25.0%
! GAAAGAGAATGAATAAAACT+TGG + chr3_4:55762941-55762960 None:intergenic 25.0%
! TAACGAACATATTTCGAATA+TGG + chr3_4:55762996-55763015 None:intergenic 25.0%
! GAAGGTAATAACAAAATGAA+GGG + chr3_4:55763131-55763150 None:intergenic 25.0%
! AGAAGGTAATAACAAAATGA+AGG + chr3_4:55763132-55763151 None:intergenic 25.0%
! AAATTCAAAACCTTGCTTAA+GGG + chr3_4:55763248-55763267 None:intergenic 25.0%
! GTGTTAGTAGAGAAAATAAA+CGG - chr3_4:55763270-55763289 Msa0508030:intron 25.0%
!!! TTATTTTTTATGGTTCCACA+TGG - chr3_4:55763377-55763396 Msa0508030:intron 25.0%
! TTATTCTGATCTATAACCTT+CGG + chr3_4:55763415-55763434 None:intergenic 25.0%
! ATCAAAATTTAAGGATGAGT+TGG - chr3_4:55763585-55763604 Msa0508030:intron 25.0%
! TCAAAATTTAAGGATGAGTT+GGG - chr3_4:55763586-55763605 Msa0508030:intron 25.0%
! ATAATAGAACTAGCAATTAG+GGG + chr3_4:55763662-55763681 None:intergenic 25.0%
! CATAATAGAACTAGCAATTA+GGG + chr3_4:55763663-55763682 None:intergenic 25.0%
! ACATAATAGAACTAGCAATT+AGG + chr3_4:55763664-55763683 None:intergenic 25.0%
!!! ATATTTTGAGTTTGAGTACA+TGG - chr3_4:55763805-55763824 Msa0508030:intron 25.0%
! ACTGAATCAAAATTTAGCAT+TGG - chr3_4:55764001-55764020 Msa0508030:intron 25.0%
! CTGAATCAAAATTTAGCATT+GGG - chr3_4:55764002-55764021 Msa0508030:intron 25.0%
! TTACAAGAGAAAACTATACT+GGG + chr3_4:55764072-55764091 None:intergenic 25.0%
! TTTACAAGAGAAAACTATAC+TGG + chr3_4:55764073-55764092 None:intergenic 25.0%
! ACTCTATATCTAAGCTATTA+TGG - chr3_4:55764138-55764157 Msa0508030:intron 25.0%
! TGTTTAGTAATGTGTAGAAA+AGG + chr3_4:55764165-55764184 None:intergenic 25.0%
! CTATAATAGATGATAGAGTT+AGG + chr3_4:55764189-55764208 None:intergenic 25.0%
! CTAACTCTATCATCTATTAT+AGG - chr3_4:55764187-55764206 Msa0508030:CDS 25.0%
!!! CATTTGCTTTTCTTTCAAAA+TGG + chr3_4:55764895-55764914 None:intergenic 25.0%
!!! CAAATGTTTTGTTGCATATT+AGG - chr3_4:55764909-55764928 Msa0508030:five_prime_UTR 25.0%
ACACATATCAATCTATCATG+CGG + chr3_4:55757574-55757593 None:intergenic 30.0%
CAGAAACTCACATTATCATT+CGG - chr3_4:55757863-55757882 Msa0508030:CDS 30.0%
CACACATTCAAATTGAAGTT+TGG + chr3_4:55758000-55758019 None:intergenic 30.0%
!! TGGTTAACAAATAATGGGTA+TGG - chr3_4:55758218-55758237 Msa0508030:intron 30.0%
!! AACAAATAATGGGTATGGTT+TGG - chr3_4:55758223-55758242 Msa0508030:intron 30.0%
!! GTTTAAGTTGATTTGATGAC+GGG - chr3_4:55758391-55758410 Msa0508030:intron 30.0%
!! TTTAAGTTGATTTGATGACG+GGG - chr3_4:55758392-55758411 Msa0508030:intron 30.0%
CATTCACACTATTTCGTATT+TGG + chr3_4:55758523-55758542 None:intergenic 30.0%
GATGTAGTGAAAAATAAGCA+AGG - chr3_4:55758623-55758642 Msa0508030:intron 30.0%
TTGGAATATAGGTACTCTTA+CGG - chr3_4:55758715-55758734 Msa0508030:intron 30.0%
ATAGTTCAGGATTTAAGCTT+TGG - chr3_4:55758837-55758856 Msa0508030:intron 30.0%
ATTGTGGATGTTAAAAGGAT+AGG - chr3_4:55758926-55758945 Msa0508030:intron 30.0%
ATGTTAAAAGGATAGGAGAT+CGG - chr3_4:55758933-55758952 Msa0508030:intron 30.0%
ATAAGCGCTAATTACGTTAA+AGG + chr3_4:55758993-55759012 None:intergenic 30.0%
!! GAGAAAAGATTTTTCTAGGA+GGG - chr3_4:55759095-55759114 Msa0508030:intron 30.0%
!! AGAAAAGATTTTTCTAGGAG+GGG - chr3_4:55759096-55759115 Msa0508030:intron 30.0%
! CTATAGCAAATACGTGTTTT+AGG - chr3_4:55759242-55759261 Msa0508030:intron 30.0%
! AGATCGATTTCTTTCTCATT+AGG - chr3_4:55759314-55759333 Msa0508030:intron 30.0%
ATTTAAAGGGTGACAAACAA+AGG - chr3_4:55759485-55759504 Msa0508030:intron 30.0%
ATTCCAACACAAGATATTAG+AGG - chr3_4:55759510-55759529 Msa0508030:intron 30.0%
TTCCAACACAAGATATTAGA+GGG - chr3_4:55759511-55759530 Msa0508030:intron 30.0%
!!! AGAGAGATTGTTTTAGAGAT+TGG - chr3_4:55759698-55759717 Msa0508030:intron 30.0%
GGGATAAATATAAGATAGCT+AGG - chr3_4:55759746-55759765 Msa0508030:intron 30.0%
ATATAAGATAGCTAGGAAAG+AGG - chr3_4:55759753-55759772 Msa0508030:intron 30.0%
GAAGGATTATACCAATCTTT+AGG - chr3_4:55759814-55759833 Msa0508030:intron 30.0%
AAGTGTATTAAGGATGAAGA+GGG - chr3_4:55759913-55759932 Msa0508030:intron 30.0%
GACGATAATAGTTATAGTTC+CGG + chr3_4:55760059-55760078 None:intergenic 30.0%
GGAACTATAACTATTATCGT+CGG - chr3_4:55760058-55760077 Msa0508030:intron 30.0%
! AACTTTTCAACGAGATTATG+AGG - chr3_4:55760205-55760224 Msa0508030:intron 30.0%
TTCCAATCTATAAGAACAAG+GGG - chr3_4:55760268-55760287 Msa0508030:intron 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr3_4:55760497-55760516 Msa0508030:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr3_4:55760503-55760522 Msa0508030:intron 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr3_4:55760661-55760680 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr3_4:55760722-55760741 Msa0508030:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr3_4:55760901-55760920 Msa0508030:intron 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr3_4:55760973-55760992 None:intergenic 30.0%
TTACACGGTTTAGATATCTT+GGG - chr3_4:55760976-55760995 Msa0508030:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr3_4:55761308-55761327 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr3_4:55761437-55761456 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr3_4:55761459-55761478 None:intergenic 30.0%
!! TTCTTTGATGCTGATTTAAC+AGG - chr3_4:55761723-55761742 Msa0508030:intron 30.0%
!!! TTGTGATACATTTTTGGTGT+TGG + chr3_4:55761754-55761773 None:intergenic 30.0%
ATGAATGTAGTATACACACA+TGG - chr3_4:55761773-55761792 Msa0508030:intron 30.0%
TCATTATGATAGGATCTGAT+GGG - chr3_4:55761926-55761945 Msa0508030:intron 30.0%
TAATAGCAGTGATTGAAAGT+AGG - chr3_4:55762079-55762098 Msa0508030:intron 30.0%
AATAGCAGTGATTGAAAGTA+GGG - chr3_4:55762080-55762099 Msa0508030:intron 30.0%
ATGGCAAATTAGAAGATTCA+AGG - chr3_4:55762243-55762262 Msa0508030:intron 30.0%
TGGCAAATTAGAAGATTCAA+GGG - chr3_4:55762244-55762263 Msa0508030:intron 30.0%
!!! CACTACAAGATTTTTTTGAC+AGG + chr3_4:55762311-55762330 None:intergenic 30.0%
ATAGTGATACTACTACATAC+CGG + chr3_4:55762566-55762585 None:intergenic 30.0%
ATATCATGCAACCAAAAGAA+AGG - chr3_4:55762814-55762833 Msa0508030:intron 30.0%
AATCTGAATTCATCATGTCT+AGG - chr3_4:55762875-55762894 Msa0508030:intron 30.0%
ATCTGAATTCATCATGTCTA+GGG - chr3_4:55762876-55762895 Msa0508030:intron 30.0%
CTATTAAGATCAGGATTTAC+AGG + chr3_4:55762906-55762925 None:intergenic 30.0%
!! TTGATGAAATTTCTGGTTCT+AGG + chr3_4:55762963-55762982 None:intergenic 30.0%
GTTGTGTTATAAACAAAACG+TGG - chr3_4:55763057-55763076 Msa0508030:intron 30.0%
AATTCAAAACCTTGCTTAAG+GGG + chr3_4:55763247-55763266 None:intergenic 30.0%
CAAATTCAAAACCTTGCTTA+AGG + chr3_4:55763249-55763268 None:intergenic 30.0%
TAGTAGAGAAAATAAACGGT+AGG - chr3_4:55763274-55763293 Msa0508030:intron 30.0%
AAAATTCAAGCATGACGTTT+AGG - chr3_4:55763449-55763468 Msa0508030:intron 30.0%
TTATGGTCTATAGAACTGAT+CGG - chr3_4:55763562-55763581 Msa0508030:intron 30.0%
ACTGATCGGATCAAAATTTA+AGG - chr3_4:55763576-55763595 Msa0508030:intron 30.0%
CAAAATTTAAGGATGAGTTG+GGG - chr3_4:55763587-55763606 Msa0508030:intron 30.0%
AGTTCTATTATGTTGTGATG+AGG - chr3_4:55763704-55763723 Msa0508030:intron 30.0%
! ATCAAAATTTAGCATTGGGT+AGG - chr3_4:55764006-55764025 Msa0508030:intron 30.0%
! TCAAAATTTAGCATTGGGTA+GGG - chr3_4:55764007-55764026 Msa0508030:intron 30.0%
TAGCTGTAACTATCCAACAA+TGG - chr3_4:55757616-55757635 Msa0508030:three_prime_UTR 35.0%
TTCAGAAAAAGAGCCATTGT+TGG + chr3_4:55757632-55757651 None:intergenic 35.0%
TTTGGAAGTTGAATGCAAAG+AGG + chr3_4:55757657-55757676 None:intergenic 35.0%
AGAAAAAGAGAAAGAGGAGT+TGG + chr3_4:55757728-55757747 None:intergenic 35.0%
! AACTCCTCTTTCTCTTTTTC+TGG - chr3_4:55757727-55757746 Msa0508030:CDS 35.0%
CTTCAATTTGAATGTGTGTC+TGG - chr3_4:55758002-55758021 Msa0508030:intron 35.0%
! ACGAAGCACTAACACAAATA+TGG + chr3_4:55758060-55758079 None:intergenic 35.0%
ATATTTGTGTTAGTGCTTCG+TGG - chr3_4:55758059-55758078 Msa0508030:intron 35.0%
TACGAACACTAATACAGACA+GGG + chr3_4:55758108-55758127 None:intergenic 35.0%
ATATGGTCAAGGAGTTACTA+GGG - chr3_4:55758269-55758288 Msa0508030:intron 35.0%
CATCAAGCAAGACTTCAAAA+CGG - chr3_4:55758332-55758351 Msa0508030:intron 35.0%
! GATTCGACAAAGTTTTACGT+TGG + chr3_4:55758487-55758506 None:intergenic 35.0%
TTTGTCGAATCTCTATGACA+TGG - chr3_4:55758496-55758515 Msa0508030:intron 35.0%
TACGAAATAGTGTGAATGCT+AGG - chr3_4:55758525-55758544 Msa0508030:intron 35.0%
! TATTTTTCACTACATCCAGG+CGG + chr3_4:55758619-55758638 None:intergenic 35.0%
!! GCTTATTTTTCACTACATCC+AGG + chr3_4:55758622-55758641 None:intergenic 35.0%
!!! CGTTTTGGAACTTGGAATAT+AGG - chr3_4:55758704-55758723 Msa0508030:intron 35.0%
TGGAATATAGGTACTCTTAC+GGG - chr3_4:55758716-55758735 Msa0508030:intron 35.0%
TACTCTTACGGGTAAATCTA+TGG - chr3_4:55758727-55758746 Msa0508030:intron 35.0%
AAGTAGTAGACACTATGACT+AGG - chr3_4:55758750-55758769 Msa0508030:intron 35.0%
! AGGATTTAAGCTTTGGTACA+CGG - chr3_4:55758844-55758863 Msa0508030:intron 35.0%
GCGAAGTTAGATCAAGAAAT+GGG - chr3_4:55758867-55758886 Msa0508030:intron 35.0%
CGAAGTTAGATCAAGAAATG+GGG - chr3_4:55758868-55758887 Msa0508030:intron 35.0%
! TATAGCCTTAAAGTGTGTAG+TGG - chr3_4:55758958-55758977 Msa0508030:intron 35.0%
TTGTTCCACTACACACTTTA+AGG + chr3_4:55758966-55758985 None:intergenic 35.0%
CCTCCCAAAACTTTACTTTA+AGG + chr3_4:55759042-55759061 None:intergenic 35.0%
!!! CCTTAAAGTAAAGTTTTGGG+AGG - chr3_4:55759039-55759058 Msa0508030:intron 35.0%
! GGAGAAAAGATTTTTCTAGG+AGG - chr3_4:55759094-55759113 Msa0508030:intron 35.0%
AGCCGATGAAAAATCTAAGA+TGG + chr3_4:55759212-55759231 None:intergenic 35.0%
!!! TACGTGTTTTAGGAAAAGAG+AGG - chr3_4:55759252-55759271 Msa0508030:intron 35.0%
ATCTCATCACTTACAAGAGT+GGG - chr3_4:55759278-55759297 Msa0508030:intron 35.0%
TTCTCATTAGGAAAACAGAC+AGG - chr3_4:55759326-55759345 Msa0508030:intron 35.0%
TTAGACTGTAAAGTCATACC+TGG - chr3_4:55759358-55759377 Msa0508030:intron 35.0%
AACTACCCAACATAGAGTAA+TGG - chr3_4:55759390-55759409 Msa0508030:intron 35.0%
CATCACCATTACTCTATGTT+GGG + chr3_4:55759398-55759417 None:intergenic 35.0%
!! AGTAATGGTGATGGATGTAA+GGG - chr3_4:55759405-55759424 Msa0508030:intron 35.0%
AATCAAGTGGTGGCATTTAA+AGG - chr3_4:55759471-55759490 Msa0508030:intron 35.0%
ATCAAGTGGTGGCATTTAAA+GGG - chr3_4:55759472-55759491 Msa0508030:intron 35.0%
ACAGTGTTCAGAGTAAAGTT+CGG - chr3_4:55759671-55759690 Msa0508030:intron 35.0%
AGTGTAAAAATGCCGAAACT+TGG - chr3_4:55759725-55759744 Msa0508030:intron 35.0%
GTGTAAAAATGCCGAAACTT+GGG - chr3_4:55759726-55759745 Msa0508030:intron 35.0%
ATACCAATCTTTAGGTACCA+AGG - chr3_4:55759822-55759841 Msa0508030:intron 35.0%
ATCTATATACAAGCTTGCGA+AGG - chr3_4:55759855-55759874 Msa0508030:intron 35.0%
TCTATATACAAGCTTGCGAA+GGG - chr3_4:55759856-55759875 Msa0508030:intron 35.0%
CATCCTTAATACACTTCACT+TGG + chr3_4:55759909-55759928 None:intergenic 35.0%
GAAGTGTATTAAGGATGAAG+AGG - chr3_4:55759912-55759931 Msa0508030:intron 35.0%
AGAGAGATATTAAGGATCGA+TGG - chr3_4:55759953-55759972 Msa0508030:CDS 35.0%
TAACTATTATCGTCGGATTC+AGG - chr3_4:55760065-55760084 Msa0508030:intron 35.0%
TCCAATCTATAAGAACAAGG+GGG - chr3_4:55760269-55760288 Msa0508030:intron 35.0%
TACAAGATTGCGCGAATTAT+AGG - chr3_4:55760295-55760314 Msa0508030:intron 35.0%
ACAAGATTGCGCGAATTATA+GGG - chr3_4:55760296-55760315 Msa0508030:intron 35.0%
TGAGTCATACCATGAAGTTA+TGG - chr3_4:55760331-55760350 Msa0508030:intron 35.0%
GAGTCATACCATGAAGTTAT+GGG - chr3_4:55760332-55760351 Msa0508030:intron 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr3_4:55760377-55760396 Msa0508030:intron 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr3_4:55760402-55760421 Msa0508030:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr3_4:55760403-55760422 Msa0508030:intron 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr3_4:55760592-55760611 None:intergenic 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr3_4:55760660-55760679 Msa0508030:intron 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr3_4:55760768-55760787 None:intergenic 35.0%
TAGAAACAAGACGGAGTATA+TGG - chr3_4:55760881-55760900 Msa0508030:intron 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr3_4:55760909-55760928 Msa0508030:intron 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr3_4:55760910-55760929 Msa0508030:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr3_4:55760961-55760980 Msa0508030:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr3_4:55760972-55760991 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr3_4:55760974-55760993 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG - chr3_4:55760975-55760994 Msa0508030:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr3_4:55761003-55761022 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr3_4:55761036-55761055 Msa0508030:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr3_4:55761110-55761129 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr3_4:55761114-55761133 Msa0508030:intron 35.0%
AGACTAGACATGATAGGATT+AGG - chr3_4:55761249-55761268 Msa0508030:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr3_4:55761301-55761320 Msa0508030:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr3_4:55761321-55761340 Msa0508030:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr3_4:55761326-55761345 Msa0508030:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr3_4:55761378-55761397 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr3_4:55761379-55761398 Msa0508030:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr3_4:55761382-55761401 Msa0508030:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr3_4:55761466-55761485 Msa0508030:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr3_4:55761478-55761497 Msa0508030:intron 35.0%
! GTTGTTGTTGTTGTTGATGA+CGG - chr3_4:55761577-55761596 Msa0508030:intron 35.0%
!! TTGTTGTTGTTGTTGATGAC+GGG - chr3_4:55761578-55761597 Msa0508030:intron 35.0%
!! TGATGCTGATTTAACAGGTT+TGG - chr3_4:55761728-55761747 Msa0508030:intron 35.0%
GGGGAGATATTGAATGTAAA+TGG + chr3_4:55761809-55761828 None:intergenic 35.0%
CTCATTATGATAGGATCTGA+TGG - chr3_4:55761925-55761944 Msa0508030:intron 35.0%
TTGAGCAATGCTAATTTGGA+AGG - chr3_4:55762490-55762509 Msa0508030:intron 35.0%
! CCATGTCTTTTCCTTTCTTT+TGG + chr3_4:55762828-55762847 None:intergenic 35.0%
CCAAAAGAAAGGAAAAGACA+TGG - chr3_4:55762825-55762844 Msa0508030:intron 35.0%
GCAAGTTTACTAGTTACAGA+AGG + chr3_4:55763149-55763168 None:intergenic 35.0%
TTGTTCTGTTTCCCTCAAAT+AGG - chr3_4:55763301-55763320 Msa0508030:intron 35.0%
! ATTGAGTTTGTTCAGGTCTA+GGG - chr3_4:55763949-55763968 Msa0508030:intron 35.0%
TTGTAAACGTACGATATCCT+TGG - chr3_4:55764086-55764105 Msa0508030:intron 35.0%
!!! TTTCTTATGGCTAGCTTTTC+TGG - chr3_4:55764291-55764310 Msa0508030:intron 35.0%
TTCAAGATATTAGCACTGTG+AGG - chr3_4:55764471-55764490 Msa0508030:intron 35.0%
TCAAGATATTAGCACTGTGA+GGG - chr3_4:55764472-55764491 Msa0508030:intron 35.0%
AATTGCACAGCAATGTATCA+CGG + chr3_4:55764766-55764785 None:intergenic 35.0%
ATGCGGATGTGGAATTATTG+TGG + chr3_4:55757557-55757576 None:intergenic 40.0%
ATCAATCTATCATGCGGATG+TGG + chr3_4:55757568-55757587 None:intergenic 40.0%
! TAAGAGATGGTGATGAGGTT+TGG + chr3_4:55757675-55757694 None:intergenic 40.0%
AACCTCATCACCATCTCTTA+AGG - chr3_4:55757675-55757694 Msa0508030:three_prime_UTR 40.0%
!! AAGGTGTTGACCTTAAGAGA+TGG + chr3_4:55757688-55757707 None:intergenic 40.0%
CGAACCAGAAAAAGAGAAAG+AGG + chr3_4:55757734-55757753 None:intergenic 40.0%
!! ATGTGAGTTTCTGAGATGCT+TGG + chr3_4:55757856-55757875 None:intergenic 40.0%
TATACCTTGAATGCAAGTGC+AGG + chr3_4:55757950-55757969 None:intergenic 40.0%
ACACATGTCAGTGTGTTATC+TGG - chr3_4:55758031-55758050 Msa0508030:intron 40.0%
TGGTGTGTCAGTATCTTGTT+TGG - chr3_4:55758079-55758098 Msa0508030:intron 40.0%
GTACGAACACTAATACAGAC+AGG + chr3_4:55758109-55758128 None:intergenic 40.0%
!! TATGGTTTGGTGATGAATGC+AGG - chr3_4:55758236-55758255 Msa0508030:intron 40.0%
!! ATGGTTTGGTGATGAATGCA+GGG - chr3_4:55758237-55758256 Msa0508030:intron 40.0%
CTAGTAACTCCTTGACCATA+TGG + chr3_4:55758270-55758289 None:intergenic 40.0%
CATATGGTCAAGGAGTTACT+AGG - chr3_4:55758268-55758287 Msa0508030:intron 40.0%
TATGGTCAAGGAGTTACTAG+GGG - chr3_4:55758270-55758289 Msa0508030:intron 40.0%
! CTTTCTGGGAAAGATTTCAG+TGG - chr3_4:55758300-55758319 Msa0508030:intron 40.0%
AAAATGGAGAGGGTTGTGTT+AGG - chr3_4:55758452-55758471 Msa0508030:intron 40.0%
AGTACAGTGTCAAATGAGCA+AGG - chr3_4:55758581-55758600 Msa0508030:intron 40.0%
GTACAGTGTCAAATGAGCAA+GGG - chr3_4:55758582-55758601 Msa0508030:intron 40.0%
AGAAGCTAGTTCATGAGAGT+AGG - chr3_4:55758678-55758697 Msa0508030:intron 40.0%
! CATGAGAGTAGGATTCGTTT+TGG - chr3_4:55758689-55758708 Msa0508030:intron 40.0%
!!! GTAGGATTCGTTTTGGAACT+TGG - chr3_4:55758696-55758715 Msa0508030:intron 40.0%
TAGTAGACACTATGACTAGG+AGG - chr3_4:55758753-55758772 Msa0508030:intron 40.0%
TGTGCCTACAAGAAACTAAG+TGG - chr3_4:55758789-55758808 Msa0508030:intron 40.0%
GTGCCTACAAGAAACTAAGT+GGG - chr3_4:55758790-55758809 Msa0508030:intron 40.0%
CTACAAGAAACTAAGTGGGT+GGG - chr3_4:55758794-55758813 Msa0508030:intron 40.0%
TACAAGAAACTAAGTGGGTG+GGG - chr3_4:55758795-55758814 Msa0508030:intron 40.0%
GCGAGAGAATTAGATAGTTC+AGG - chr3_4:55758824-55758843 Msa0508030:intron 40.0%
! GGATTTAAGCTTTGGTACAC+GGG - chr3_4:55758845-55758864 Msa0508030:intron 40.0%
GGCGAAGTTAGATCAAGAAA+TGG - chr3_4:55758866-55758885 Msa0508030:intron 40.0%
GTTAGATCAAGAAATGGGGT+AGG - chr3_4:55758872-55758891 Msa0508030:intron 40.0%
GGAGTGGAAGAAAGATATTG+TGG - chr3_4:55758910-55758929 Msa0508030:intron 40.0%
TGTTCTTCTAATCCTACCTG+AGG + chr3_4:55759019-55759038 None:intergenic 40.0%
GGAGCTAGAAGGATTAATTC+AGG - chr3_4:55759060-55759079 Msa0508030:intron 40.0%
! TTTCTAGGAGGGGATTTGAA+TGG - chr3_4:55759106-55759125 Msa0508030:intron 40.0%
! TTCTAGGAGGGGATTTGAAT+GGG - chr3_4:55759107-55759126 Msa0508030:intron 40.0%
CATCTCATCACTTACAAGAG+TGG - chr3_4:55759277-55759296 Msa0508030:intron 40.0%
TCTCATCACTTACAAGAGTG+GGG - chr3_4:55759279-55759298 Msa0508030:intron 40.0%
GAAATCGATCTGAGAACAAG+AGG + chr3_4:55759305-55759324 None:intergenic 40.0%
TGTAAAGTCATACCTGGAGA+GGG - chr3_4:55759364-55759383 Msa0508030:intron 40.0%
CCATCACCATTACTCTATGT+TGG + chr3_4:55759399-55759418 None:intergenic 40.0%
CCAACATAGAGTAATGGTGA+TGG - chr3_4:55759396-55759415 Msa0508030:intron 40.0%
!! GAGTAATGGTGATGGATGTA+AGG - chr3_4:55759404-55759423 Msa0508030:intron 40.0%
! TGATGGATGTAAGGGTTAAG+AGG - chr3_4:55759413-55759432 Msa0508030:intron 40.0%
CTCCCTCTAATATCTTGTGT+TGG + chr3_4:55759516-55759535 None:intergenic 40.0%
CAACACAAGATATTAGAGGG+AGG - chr3_4:55759514-55759533 Msa0508030:intron 40.0%
AGATATTAGAGGGAGGTTTC+AGG - chr3_4:55759521-55759540 Msa0508030:intron 40.0%
ATATCATTAGCGCTTCCATG+TGG + chr3_4:55759550-55759569 None:intergenic 40.0%
!! ATGGAAGCGCTAATGATATG+TGG - chr3_4:55759551-55759570 Msa0508030:intron 40.0%
!! TGGAAGCGCTAATGATATGT+GGG - chr3_4:55759552-55759571 Msa0508030:intron 40.0%
GATGGCTCATGAGATTAAGA+AGG - chr3_4:55759579-55759598 Msa0508030:intron 40.0%
! TTGGGAGAATCTAGAGGTTT+TGG - chr3_4:55759616-55759635 Msa0508030:intron 40.0%
!!! AATCTAGAGGTTTTGGACCT+AGG - chr3_4:55759623-55759642 Msa0508030:intron 40.0%
!!! ATCTAGAGGTTTTGGACCTA+GGG - chr3_4:55759624-55759643 Msa0508030:intron 40.0%
CAATCTTTAGGTACCAAGGA+GGG - chr3_4:55759826-55759845 Msa0508030:intron 40.0%
AATCTTTAGGTACCAAGGAG+GGG - chr3_4:55759827-55759846 Msa0508030:intron 40.0%
TAATACACTTCACTTGGTCC+AGG + chr3_4:55759903-55759922 None:intergenic 40.0%
GGACCAAGTGAAGTGTATTA+AGG - chr3_4:55759903-55759922 Msa0508030:intron 40.0%
GGTGCAAGAGAGAGATATTA+AGG - chr3_4:55759945-55759964 Msa0508030:CDS 40.0%
AGATCTTACCAGACTCTAAC+AGG - chr3_4:55760013-55760032 Msa0508030:intron 40.0%
ATGTCTAACCTGTTAGAGTC+TGG + chr3_4:55760024-55760043 None:intergenic 40.0%
TAACAGGTTAGACATCAGAG+AGG - chr3_4:55760029-55760048 Msa0508030:intron 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG - chr3_4:55760094-55760113 Msa0508030:intron 40.0%
GCGTTGAAAAGGATGAGTAA+TGG - chr3_4:55760105-55760124 Msa0508030:intron 40.0%
GAAAAGGATGAGTAATGGCA+AGG - chr3_4:55760110-55760129 Msa0508030:intron 40.0%
ACTTCGATAGGTATGTTGTC+CGG + chr3_4:55760144-55760163 None:intergenic 40.0%
ACAACATACCTATCGAAGTG+TGG - chr3_4:55760145-55760164 Msa0508030:intron 40.0%
! AGACTTTTCCACACTTCGAT+AGG + chr3_4:55760156-55760175 None:intergenic 40.0%
ATCGAAGTGTGGAAAAGTCT+TGG - chr3_4:55760156-55760175 Msa0508030:intron 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + chr3_4:55760273-55760292 None:intergenic 40.0%
CAAGATTGCGCGAATTATAG+GGG - chr3_4:55760297-55760316 Msa0508030:intron 40.0%
ATACCATGAAGTTATGGGAG+AGG - chr3_4:55760337-55760356 Msa0508030:intron 40.0%
TACCATGAAGTTATGGGAGA+GGG - chr3_4:55760338-55760357 Msa0508030:intron 40.0%
CACGTTACGGATAACCAATT+TGG - chr3_4:55760390-55760409 Msa0508030:intron 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr3_4:55760407-55760426 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr3_4:55760406-55760425 Msa0508030:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr3_4:55760535-55760554 Msa0508030:intron 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr3_4:55760543-55760562 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr3_4:55760587-55760606 Msa0508030:intron 40.0%
AGCTATCCAGGATATGTATG+AGG - chr3_4:55760599-55760618 Msa0508030:intron 40.0%
GCTATCCAGGATATGTATGA+GGG - chr3_4:55760600-55760619 Msa0508030:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr3_4:55760672-55760691 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr3_4:55760673-55760692 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr3_4:55760672-55760691 Msa0508030:intron 40.0%
TAACAATAGGACTGCACCAA+GGG - chr3_4:55760673-55760692 Msa0508030:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr3_4:55760933-55760952 Msa0508030:intron 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr3_4:55760940-55760959 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr3_4:55760996-55761015 Msa0508030:intron 40.0%
GTACATCATCGTATTCAAGC+TGG - chr3_4:55761035-55761054 Msa0508030:intron 40.0%
! AAGGTACCACTTAAGCTGAA+AGG - chr3_4:55761101-55761120 Msa0508030:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr3_4:55761243-55761262 Msa0508030:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr3_4:55761274-55761293 Msa0508030:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr3_4:55761275-55761294 Msa0508030:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr3_4:55761276-55761295 Msa0508030:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr3_4:55761407-55761426 Msa0508030:intron 40.0%
!! TGTTGTTGTTGTTGATGACG+GGG - chr3_4:55761579-55761598 Msa0508030:intron 40.0%
! ATGACGGGGATAGTCAAATT+CGG - chr3_4:55761593-55761612 Msa0508030:intron 40.0%
!! AAAATTGGCTTGACGCAGTA+TGG + chr3_4:55761676-55761695 None:intergenic 40.0%
! CTGCGTCAAGCCAATTTTAA+AGG - chr3_4:55761678-55761697 Msa0508030:intron 40.0%
TACCTTTGTCACATTTGCCA+GGG + chr3_4:55761891-55761910 None:intergenic 40.0%
TTACCTTTGTCACATTTGCC+AGG + chr3_4:55761892-55761911 None:intergenic 40.0%
! TTTGGAAGGTGCACTTGTAA+CGG - chr3_4:55762504-55762523 Msa0508030:intron 40.0%
ACATGGAAAGCGAGTTCTTT+GGG - chr3_4:55762842-55762861 Msa0508030:intron 40.0%
AACGTGGATGCTTATTGCAA+AGG - chr3_4:55763073-55763092 Msa0508030:intron 40.0%
TAACATATGAGCTGCAAGTC+TGG + chr3_4:55763189-55763208 None:intergenic 40.0%
! ATGGCTTTTAGATGTACCGA+AGG - chr3_4:55763396-55763415 Msa0508030:intron 40.0%
TGAAGCTTTGCAGGTCAAAT+TGG + chr3_4:55763518-55763537 None:intergenic 40.0%
AATTTGACCTGCAAAGCTTC+AGG - chr3_4:55763517-55763536 Msa0508030:intron 40.0%
TGCAAAGCTTCAGGATTGTT+CGG - chr3_4:55763526-55763545 Msa0508030:intron 40.0%
! ATTTAAGGATGAGTTGGGGT+TGG - chr3_4:55763591-55763610 Msa0508030:intron 40.0%
ACTGAGAGGTGAGTAAGTAA+CGG + chr3_4:55763634-55763653 None:intergenic 40.0%
TGAACAAACTCAATGCTCTG+CGG + chr3_4:55763943-55763962 None:intergenic 40.0%
! CATTGAGTTTGTTCAGGTCT+AGG - chr3_4:55763948-55763967 Msa0508030:intron 40.0%
CTGGGTGAGAAAGTAGAATT+GGG + chr3_4:55764054-55764073 None:intergenic 40.0%
ACTGGGTGAGAAAGTAGAAT+TGG + chr3_4:55764055-55764074 None:intergenic 40.0%
TTGTATCTTCTCCTCAAGCA+GGG + chr3_4:55764347-55764366 None:intergenic 40.0%
TACCTCTGCAAAATTGCTGA+TGG - chr3_4:55764625-55764644 Msa0508030:CDS 40.0%
ACCTCTGCAAAATTGCTGAT+GGG - chr3_4:55764626-55764645 Msa0508030:CDS 40.0%
! ATCGCTAACGAAGTTGTTTC+TGG - chr3_4:55764707-55764726 Msa0508030:intron 40.0%
ATTGCACAGCAATGTATCAC+GGG + chr3_4:55764765-55764784 None:intergenic 40.0%
! GACCTTAAGAGATGGTGATG+AGG + chr3_4:55757680-55757699 None:intergenic 45.0%
TTCACTCTACCACTCTTCAC+AGG - chr3_4:55757808-55757827 Msa0508030:intron 45.0%
TCACTCTACCACTCTTCACA+GGG - chr3_4:55757809-55757828 Msa0508030:intron 45.0%
! GATGCTTGGTGAGTTTGCTT+TGG + chr3_4:55757842-55757861 None:intergenic 45.0%
TGATCCTGCACTTGCATTCA+AGG - chr3_4:55757943-55757962 Msa0508030:intron 45.0%
ACTAGGGGACAAGATCTTTC+TGG - chr3_4:55758285-55758304 Msa0508030:intron 45.0%
CTAGGGGACAAGATCTTTCT+GGG - chr3_4:55758286-55758305 Msa0508030:intron 45.0%
! ACAACCCTCTCCATTTTACC+CGG + chr3_4:55758449-55758468 None:intergenic 45.0%
!! AAGTTTTACGTTGGCTGTCG+AGG + chr3_4:55758478-55758497 None:intergenic 45.0%
TAGACACTATGACTAGGAGG+AGG - chr3_4:55758756-55758775 Msa0508030:intron 45.0%
CCACCCACTTAGTTTCTTGT+AGG + chr3_4:55758796-55758815 None:intergenic 45.0%
CCTACAAGAAACTAAGTGGG+TGG - chr3_4:55758793-55758812 Msa0508030:intron 45.0%
AACTAAGTGGGTGGGGAAAA+AGG - chr3_4:55758802-55758821 Msa0508030:intron 45.0%
AAATGGGGTAGGCATCATTG+TGG - chr3_4:55758883-55758902 Msa0508030:intron 45.0%
GGTAGGCATCATTGTGGATA+AGG - chr3_4:55758889-55758908 Msa0508030:intron 45.0%
GCATCATTGTGGATAAGGAG+TGG - chr3_4:55758894-55758913 Msa0508030:intron 45.0%
AATTAGCGCTTATGCACCTC+AGG - chr3_4:55759000-55759019 Msa0508030:intron 45.0%
!!! AAGTTTTGGGAGGAGCTAGA+AGG - chr3_4:55759049-55759068 Msa0508030:intron 45.0%
GGGATTTGAATGGGCATGTA+GGG - chr3_4:55759116-55759135 Msa0508030:intron 45.0%
ATTTGAATGGGCATGTAGGG+AGG - chr3_4:55759119-55759138 Msa0508030:intron 45.0%
TTTGAATGGGCATGTAGGGA+GGG - chr3_4:55759120-55759139 Msa0508030:intron 45.0%
CTGTAAAGTCATACCTGGAG+AGG - chr3_4:55759363-55759382 Msa0508030:intron 45.0%
TGGATGTAAGGGTTAAGAGG+AGG - chr3_4:55759416-55759435 Msa0508030:intron 45.0%
GGATGTAAGGGTTAAGAGGA+GGG - chr3_4:55759417-55759436 Msa0508030:intron 45.0%
! AAATGCCACCACTTGATTCG+CGG + chr3_4:55759469-55759488 None:intergenic 45.0%
!! GGAAGCGCTAATGATATGTG+GGG - chr3_4:55759553-55759572 Msa0508030:intron 45.0%
! GAAGCGCTAATGATATGTGG+GGG - chr3_4:55759554-55759573 Msa0508030:intron 45.0%
TAATGATATGTGGGGGAGGA+TGG - chr3_4:55759561-55759580 Msa0508030:intron 45.0%
GGCTCATGAGATTAAGAAGG+TGG - chr3_4:55759582-55759601 Msa0508030:intron 45.0%
AAGGTGGCAAAAGAGACGTT+GGG - chr3_4:55759598-55759617 Msa0508030:intron 45.0%
!!! TCTAGAGGTTTTGGACCTAG+GGG - chr3_4:55759625-55759644 Msa0508030:intron 45.0%
GACCTAGGGGTAAAGAATCT+TGG - chr3_4:55759638-55759657 Msa0508030:intron 45.0%
CACCAAGATTCTTTACCCCT+AGG + chr3_4:55759643-55759662 None:intergenic 45.0%
CTAGGGGTAAAGAATCTTGG+TGG - chr3_4:55759641-55759660 Msa0508030:intron 45.0%
AGCTAGGAAAGAGGCTAAGA+AGG - chr3_4:55759762-55759781 Msa0508030:intron 45.0%
TAGGAAAGAGGCTAAGAAGG+CGG - chr3_4:55759765-55759784 Msa0508030:intron 45.0%
GCGAGAACTCAAGCATTTGA+AGG - chr3_4:55759796-55759815 Msa0508030:intron 45.0%
CCTCCTTGGTACCTAAAGAT+TGG + chr3_4:55759828-55759847 None:intergenic 45.0%
CCAATCTTTAGGTACCAAGG+AGG - chr3_4:55759825-55759844 Msa0508030:intron 45.0%
ATCTTTAGGTACCAAGGAGG+GGG - chr3_4:55759828-55759847 Msa0508030:intron 45.0%
TATAGATTTCTCCCCCTCCT+TGG + chr3_4:55759842-55759861 None:intergenic 45.0%
AGAACGAAAGACAAGAGACC+TGG - chr3_4:55759882-55759901 Msa0508030:intron 45.0%
! GGATGAAGAGGGTAGAGTTT+TGG - chr3_4:55759924-55759943 Msa0508030:intron 45.0%
ATGAGTAATGGCAAGGCAGT+TGG - chr3_4:55760117-55760136 Msa0508030:intron 45.0%
TGAGTAATGGCAAGGCAGTT+GGG - chr3_4:55760118-55760137 Msa0508030:intron 45.0%
TGGAAAAGTCTTGGCGATAG+AGG - chr3_4:55760165-55760184 Msa0508030:intron 45.0%
TACCCTCTCCCATAACTTCA+TGG + chr3_4:55760343-55760362 None:intergenic 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr3_4:55760545-55760564 Msa0508030:intron 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr3_4:55760755-55760774 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr3_4:55760783-55760802 Msa0508030:CDS 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG - chr3_4:55760808-55760827 Msa0508030:CDS 45.0%
TAAATGGGAGGCTAGAGACT+TGG - chr3_4:55760823-55760842 Msa0508030:intron 45.0%
!! ACTCCGTCTTGTTTCTACTC+AGG + chr3_4:55760878-55760897 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr3_4:55761039-55761058 Msa0508030:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr3_4:55761048-55761067 Msa0508030:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr3_4:55761062-55761081 Msa0508030:intron 45.0%
AGGTGTGTTGTGCGATAAGA+AGG - chr3_4:55761082-55761101 Msa0508030:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr3_4:55761148-55761167 Msa0508030:intron 45.0%
TCCGTACCATACAACATTGC+CGG + chr3_4:55761152-55761171 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr3_4:55761156-55761175 Msa0508030:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr3_4:55761157-55761176 Msa0508030:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr3_4:55761193-55761212 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr3_4:55761196-55761215 Msa0508030:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr3_4:55761277-55761296 Msa0508030:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr3_4:55761391-55761410 Msa0508030:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr3_4:55761401-55761420 Msa0508030:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr3_4:55761547-55761566 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr3_4:55761548-55761567 None:intergenic 45.0%
ATCAGCACCTGACATGACAA+CGG + chr3_4:55761834-55761853 None:intergenic 45.0%
!! CATGTCAGGTGCTGATCTTT+CGG - chr3_4:55761838-55761857 Msa0508030:intron 45.0%
!! TAGAAGTGCAGACTTTTCCC+TGG - chr3_4:55761871-55761890 Msa0508030:intron 45.0%
TTCCCTGGCAAATGTGACAA+AGG - chr3_4:55761886-55761905 Msa0508030:intron 45.0%
TTGGCATTACTGCTTTCTGC+AGG - chr3_4:55762462-55762481 Msa0508030:intron 45.0%
! TTGGAAGGTGCACTTGTAAC+GGG - chr3_4:55762505-55762524 Msa0508030:intron 45.0%
GACATGGAAAGCGAGTTCTT+TGG - chr3_4:55762841-55762860 Msa0508030:intron 45.0%
CATGGAAAGCGAGTTCTTTG+GGG - chr3_4:55762843-55762862 Msa0508030:intron 45.0%
ATGGAAAGCGAGTTCTTTGG+GGG - chr3_4:55762844-55762863 Msa0508030:intron 45.0%
AATCCAGTTCCCCTTAAGCA+AGG - chr3_4:55763235-55763254 Msa0508030:intron 45.0%
AAACCTTGCTTAAGGGGAAC+TGG + chr3_4:55763241-55763260 None:intergenic 45.0%
GGGTCAGTAGACCTATTTGA+GGG + chr3_4:55763315-55763334 None:intergenic 45.0%
TGGGTCAGTAGACCTATTTG+AGG + chr3_4:55763316-55763335 None:intergenic 45.0%
CGGTACATCTAAAAGCCATG+TGG + chr3_4:55763395-55763414 None:intergenic 45.0%
ACGACTCTTAAGGACGAGTT+TGG + chr3_4:55763484-55763503 None:intergenic 45.0%
CCTTAAGAGTCGTCATGTCT+CGG - chr3_4:55763491-55763510 Msa0508030:intron 45.0%
GAACAATCCTGAAGCTTTGC+AGG + chr3_4:55763527-55763546 None:intergenic 45.0%
GCAAAGCTTCAGGATTGTTC+GGG - chr3_4:55763527-55763546 Msa0508030:intron 45.0%
TTCAGGATTGTTCGGGTCTT+GGG - chr3_4:55763534-55763553 Msa0508030:intron 45.0%
CTGAGAGGTGAGTAAGTAAC+GGG + chr3_4:55763633-55763652 None:intergenic 45.0%
AATTAGGGGTGAGAACTGAG+AGG + chr3_4:55763648-55763667 None:intergenic 45.0%
GAACAAACTCAATGCTCTGC+GGG + chr3_4:55763942-55763961 None:intergenic 45.0%
!! GCAGAGCATTGAGTTTGTTC+AGG - chr3_4:55763942-55763961 Msa0508030:intron 45.0%
! TTTAGCATTGGGTAGGGAAC+AGG - chr3_4:55764013-55764032 Msa0508030:intron 45.0%
! TTAGCATTGGGTAGGGAACA+GGG - chr3_4:55764014-55764033 Msa0508030:intron 45.0%
AGGGCAGAAGGTAGTCATTT+AGG - chr3_4:55764113-55764132 Msa0508030:intron 45.0%
!!! CTTATGGCTAGCTTTTCTGG+CGG - chr3_4:55764294-55764313 Msa0508030:intron 45.0%
TATATCAACCTAGGCAGCCT+TGG + chr3_4:55764320-55764339 None:intergenic 45.0%
CAGGGGTTGTATATCAACCT+AGG + chr3_4:55764329-55764348 None:intergenic 45.0%
TGATATACAACCCCTGCTTG+AGG - chr3_4:55764333-55764352 Msa0508030:intron 45.0%
TGTATCTTCTCCTCAAGCAG+GGG + chr3_4:55764346-55764365 None:intergenic 45.0%
GTTGTATCTTCTCCTCAAGC+AGG + chr3_4:55764348-55764367 None:intergenic 45.0%
GATATTAGCACTGTGAGGGA+AGG - chr3_4:55764476-55764495 Msa0508030:intron 45.0%
TCACGTTGATCTTCTCTGAG+CGG + chr3_4:55764604-55764623 None:intergenic 45.0%
! ACCCATCAGCAATTTTGCAG+AGG + chr3_4:55764630-55764649 None:intergenic 45.0%
GACAGAGTGAACTCATCAAC+TGG - chr3_4:55764731-55764750 Msa0508030:intron 45.0%
!! AGTTGGTGAGCAGGTTGAAG+AGG + chr3_4:55757711-55757730 None:intergenic 50.0%
!! AGAAAGAGGAGTTGGTGAGC+AGG + chr3_4:55757720-55757739 None:intergenic 50.0%
GATTGCTTCCCTGTGAAGAG+TGG + chr3_4:55757820-55757839 None:intergenic 50.0%
!! GTTTGGTGATGAATGCAGGG+TGG - chr3_4:55758240-55758259 Msa0508030:intron 50.0%
ATAGTCAATCCTGCCAAGGC+CGG - chr3_4:55758415-55758434 Msa0508030:intron 50.0%
! TCTCCATTTTACCCGGGCTT+GGG + chr3_4:55758442-55758461 None:intergenic 50.0%
AAGCCCGGGTAAAATGGAGA+GGG - chr3_4:55758442-55758461 Msa0508030:intron 50.0%
! CAACCCTCTCCATTTTACCC+GGG + chr3_4:55758448-55758467 None:intergenic 50.0%
GGTTCCCACATCTTCGTGAA+CGG - chr3_4:55758645-55758664 Msa0508030:intron 50.0%
GTTCCCACATCTTCGTGAAC+GGG - chr3_4:55758646-55758665 Msa0508030:intron 50.0%
GGGGATTTGAATGGGCATGT+AGG - chr3_4:55759115-55759134 Msa0508030:intron 50.0%
AGGGTTTCGAGAGGTTTCGA+GGG - chr3_4:55759139-55759158 Msa0508030:intron 50.0%
GGCAAAGAGAAGAGACCGTA+GGG - chr3_4:55759438-55759457 Msa0508030:intron 50.0%
GCAAAGAGAAGAGACCGTAG+GGG - chr3_4:55759439-55759458 Msa0508030:intron 50.0%
CAAAGAGAAGAGACCGTAGG+GGG - chr3_4:55759440-55759459 Msa0508030:intron 50.0%
AAAGAGAAGAGACCGTAGGG+GGG - chr3_4:55759441-55759460 Msa0508030:intron 50.0%
GAAGGTGGCAAAAGAGACGT+TGG - chr3_4:55759597-55759616 Msa0508030:intron 50.0%
GAGACGTTGGGAGAATCTAG+AGG - chr3_4:55759610-55759629 Msa0508030:intron 50.0%
GGGGTAAAGAATCTTGGTGG+TGG - chr3_4:55759644-55759663 Msa0508030:intron 50.0%
CAGGTTAGACATCAGAGAGG+AGG - chr3_4:55760032-55760051 Msa0508030:intron 50.0%
TAGACATCAGAGAGGAGGAC+CGG - chr3_4:55760037-55760056 Msa0508030:intron 50.0%
AGTCTTGGCGATAGAGGAGT+TGG - chr3_4:55760171-55760190 Msa0508030:intron 50.0%
GTCTTGGCGATAGAGGAGTT+GGG - chr3_4:55760172-55760191 Msa0508030:intron 50.0%
CGAAGAAAATGCCAGACGAG+TGG - chr3_4:55760229-55760248 Msa0508030:intron 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr3_4:55760446-55760465 Msa0508030:intron 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr3_4:55760555-55760574 Msa0508030:intron 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr3_4:55760556-55760575 Msa0508030:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr3_4:55760557-55760576 Msa0508030:intron 50.0%
AAGCGCCCTCATACATATCC+TGG + chr3_4:55760608-55760627 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr3_4:55760692-55760711 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr3_4:55760793-55760812 Msa0508030:CDS 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr3_4:55760794-55760813 Msa0508030:CDS 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG - chr3_4:55760807-55760826 Msa0508030:CDS 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG - chr3_4:55760846-55760865 Msa0508030:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG + chr3_4:55760856-55760875 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + chr3_4:55760875-55760894 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - chr3_4:55760872-55760891 Msa0508030:intron 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr3_4:55760923-55760942 Msa0508030:intron 50.0%
CTTATCGCACAACACACCTG+AGG + chr3_4:55761081-55761100 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr3_4:55761143-55761162 Msa0508030:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr3_4:55761204-55761223 Msa0508030:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr3_4:55761224-55761243 Msa0508030:intron 50.0%
CTTCTTACCACGGCGTCTAT+TGG + chr3_4:55761368-55761387 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr3_4:55761543-55761562 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr3_4:55761549-55761568 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr3_4:55761546-55761565 Msa0508030:intron 50.0%
TCAGCACCTGACATGACAAC+GGG + chr3_4:55761833-55761852 None:intergenic 50.0%
GGATCCAATATTACAGGCGC+CGG - chr3_4:55762544-55762563 Msa0508030:intron 50.0%
CATACCGGCGCCTGTAATAT+TGG + chr3_4:55762551-55762570 None:intergenic 50.0%
AGCATGACGTTTAGGTGAGC+TGG - chr3_4:55763457-55763476 Msa0508030:intron 50.0%
CCGAGACATGACGACTCTTA+AGG + chr3_4:55763494-55763513 None:intergenic 50.0%
CTTCAGGATTGTTCGGGTCT+TGG - chr3_4:55763533-55763552 Msa0508030:intron 50.0%
TCGGGTCTTGGGACAAGTTA+TGG - chr3_4:55763545-55763564 Msa0508030:intron 50.0%
GTACGATATCCTTGGACGCA+GGG - chr3_4:55764094-55764113 Msa0508030:intron 50.0%
AGCGGCACATCAGTGAAATC+TGG + chr3_4:55764586-55764605 None:intergenic 50.0%
! GGTGAGCAGGTTGAAGAGGA+AGG + chr3_4:55757707-55757726 None:intergenic 55.0%
! TGGTGATGAATGCAGGGTGG+AGG - chr3_4:55758243-55758262 Msa0508030:intron 55.0%
GGTGATGAATGCAGGGTGGA+GGG - chr3_4:55758244-55758263 Msa0508030:intron 55.0%
GGGGATAGTCAATCCTGCCA+AGG - chr3_4:55758411-55758430 Msa0508030:intron 55.0%
! ATTTTACCCGGGCTTGGGAC+CGG + chr3_4:55758437-55758456 None:intergenic 55.0%
! CTCTCCATTTTACCCGGGCT+TGG + chr3_4:55758443-55758462 None:intergenic 55.0%
CAAGCCCGGGTAAAATGGAG+AGG - chr3_4:55758441-55758460 Msa0508030:intron 55.0%
GTGAATGCTAGGTCGTTGCC+CGG - chr3_4:55758536-55758555 Msa0508030:intron 55.0%
GCACCCGTTCACGAAGATGT+GGG + chr3_4:55758652-55758671 None:intergenic 55.0%
CACATCTTCGTGAACGGGTG+CGG - chr3_4:55758651-55758670 Msa0508030:intron 55.0%
ACATCTTCGTGAACGGGTGC+GGG - chr3_4:55758652-55758671 Msa0508030:intron 55.0%
AGCGCTTATGCACCTCAGGT+AGG - chr3_4:55759004-55759023 Msa0508030:intron 55.0%
CATGTAGGGAGGGTTTCGAG+AGG - chr3_4:55759130-55759149 Msa0508030:intron 55.0%
GAGGGTTTCGAGAGGTTTCG+AGG - chr3_4:55759138-55759157 Msa0508030:intron 55.0%
! AGAGGTTTCGAGGGTGTGCA+TGG - chr3_4:55759148-55759167 Msa0508030:intron 55.0%
! GAGGTTTCGAGGGTGTGCAT+GGG - chr3_4:55759149-55759168 Msa0508030:intron 55.0%
! AGGTTTCGAGGGTGTGCATG+GGG - chr3_4:55759150-55759169 Msa0508030:intron 55.0%
TGGTCTCGGGGAGGTAAATG+CGG - chr3_4:55759177-55759196 Msa0508030:intron 55.0%
TGGGTAGTTAAGCCCTCTCC+AGG + chr3_4:55759379-55759398 None:intergenic 55.0%
GGGCAAAGAGAAGAGACCGT+AGG - chr3_4:55759437-55759456 Msa0508030:intron 55.0%
GGAGGTTTCAGGCAACCACA+TGG - chr3_4:55759532-55759551 Msa0508030:intron 55.0%
GCGCTAATGATATGTGGGGG+AGG - chr3_4:55759557-55759576 Msa0508030:intron 55.0%
TAATGGCAAGGCAGTTGGGC+CGG - chr3_4:55760122-55760141 Msa0508030:intron 55.0%
TTGGCGATAGAGGAGTTGGG+TGG - chr3_4:55760175-55760194 Msa0508030:intron 55.0%
GTGCTTCTTCTCCACTCGTC+TGG + chr3_4:55760243-55760262 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - chr3_4:55760416-55760435 Msa0508030:intron 55.0%
! GACGCGTGATGGAGCGATAT+CGG - chr3_4:55760457-55760476 Msa0508030:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG - chr3_4:55760461-55760480 Msa0508030:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + chr3_4:55760565-55760584 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + chr3_4:55760566-55760585 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr3_4:55760626-55760645 Msa0508030:CDS 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - chr3_4:55760630-55760649 Msa0508030:CDS 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - chr3_4:55760631-55760650 Msa0508030:CDS 55.0%
TAGTGTGAGGACGCAGGATG+GGG - chr3_4:55760632-55760651 Msa0508030:CDS 55.0%
CGAGGGAGGAGTTAAATGGG+AGG - chr3_4:55760811-55760830 Msa0508030:CDS 55.0%
ATGGGAGGCTAGAGACTTGG+AGG - chr3_4:55760826-55760845 Msa0508030:intron 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr3_4:55761130-55761149 Msa0508030:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr3_4:55761160-55761179 Msa0508030:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr3_4:55761216-55761235 Msa0508030:intron 55.0%
GAGAAGACCAATAGACGCCG+TGG - chr3_4:55761358-55761377 Msa0508030:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3_4:55761535-55761554 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3_4:55761534-55761553 Msa0508030:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3_4:55761535-55761554 Msa0508030:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr3_4:55761541-55761560 Msa0508030:intron 55.0%
ACCTGACATGACAACGGGTG+GGG + chr3_4:55761828-55761847 None:intergenic 55.0%
CACCTGACATGACAACGGGT+GGG + chr3_4:55761829-55761848 None:intergenic 55.0%
CGTACGATATCCTTGGACGC+AGG - chr3_4:55764093-55764112 Msa0508030:intron 55.0%
GCACAGCAATGTATCACGGG+TGG + chr3_4:55764762-55764781 None:intergenic 55.0%
ATGCAGGGTGGAGGGCCATA+TGG - chr3_4:55758252-55758271 Msa0508030:intron 60.0%
GGTGGAGGGCCATATGGTCA+AGG - chr3_4:55758258-55758277 Msa0508030:intron 60.0%
GGTCCCAAGCCCGGGTAAAA+TGG - chr3_4:55758436-55758455 Msa0508030:intron 60.0%
CCATACAGCGCGTTGCTTCC+GGG + chr3_4:55758557-55758576 None:intergenic 60.0%
GCCATACAGCGCGTTGCTTC+CGG + chr3_4:55758558-55758577 None:intergenic 60.0%
CGCACCCGTTCACGAAGATG+TGG + chr3_4:55758653-55758672 None:intergenic 60.0%
! GGTTTCGAGGGTGTGCATGG+GGG - chr3_4:55759151-55759170 Msa0508030:intron 60.0%
! GTTTCGAGGGTGTGCATGGG+GGG - chr3_4:55759152-55759171 Msa0508030:intron 60.0%
! GTGCATGGGGGGTATGGTCT+CGG - chr3_4:55759163-55759182 Msa0508030:intron 60.0%
! TGCATGGGGGGTATGGTCTC+GGG - chr3_4:55759164-55759183 Msa0508030:intron 60.0%
TCTCGGGGAGGTAAATGCGG+AGG - chr3_4:55759180-55759199 Msa0508030:intron 60.0%
CTCGGGGAGGTAAATGCGGA+GGG - chr3_4:55759181-55759200 Msa0508030:intron 60.0%
! TCGTCGGATTCAGGAGCACG+AGG - chr3_4:55760074-55760093 Msa0508030:intron 60.0%
GCTTCCATAGTCGACCTCCC+AGG + chr3_4:55760423-55760442 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - chr3_4:55760562-55760581 Msa0508030:intron 60.0%
! AGGGCGCTTCGACTAGTGTG+AGG - chr3_4:55760619-55760638 Msa0508030:CDS 60.0%
AGGACGCAGGATGGGGATAC+CGG - chr3_4:55760639-55760658 Msa0508030:CDS 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr3_4:55760797-55760816 Msa0508030:CDS 60.0%
TCCCCACCCGTTGTCATGTC+AGG - chr3_4:55761824-55761843 Msa0508030:intron 60.0%
GCACCTGACATGACAACGGG+TGG + chr3_4:55761830-55761849 None:intergenic 60.0%
ATCCTTGGACGCAGGGCAGA+AGG - chr3_4:55764101-55764120 Msa0508030:intron 60.0%
TACCTTCTGCCCTGCGTCCA+AGG + chr3_4:55764106-55764125 None:intergenic 60.0%
!!! GCTAGCTTTTCTGGCGGCCA+AGG - chr3_4:55764300-55764319 Msa0508030:intron 60.0%
CCCGGAAGCAACGCGCTGTA+TGG - chr3_4:55758554-55758573 Msa0508030:intron 65.0%
ACATCCAGGCGGCGATGCAG+CGG + chr3_4:55758608-55758627 None:intergenic 65.0%
! GAGGGTGTGCATGGGGGGTA+TGG - chr3_4:55759157-55759176 Msa0508030:intron 65.0%
! GCATGGGGGGTATGGTCTCG+GGG - chr3_4:55759165-55759184 Msa0508030:intron 65.0%
TGATTCGCGGAGCCCCCCTA+CGG + chr3_4:55759456-55759475 None:intergenic 65.0%
GGGCTCCGCGAATCAAGTGG+TGG - chr3_4:55759461-55759480 Msa0508030:intron 65.0%
! TGGGGGGTATGGTCTCGGGG+AGG - chr3_4:55759168-55759187 Msa0508030:intron 70.0%
GGGGGGCTCCGCGAATCAAG+TGG - chr3_4:55759458-55759477 Msa0508030:intron 70.0%
TCTGGCGGCCAAGGCTGCCT+AGG - chr3_4:55764309-55764328 Msa0508030:intron 70.0%
GGCTTGGGACCGGCCTTGGC+AGG + chr3_4:55758427-55758446 None:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG - chr3_4:55758427-55758446 Msa0508030:intron 75.0%
CCAAGGCCGGTCCCAAGCCC+GGG - chr3_4:55758428-55758447 Msa0508030:intron 75.0%
! CCCGGGCTTGGGACCGGCCT+TGG + chr3_4:55758431-55758450 None:intergenic 80.0%
! AGGGCCGCTGCATCGCCGCC+TGG - chr3_4:55758601-55758620 Msa0508030:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 55757544 55764966 55757544 ID=Msa0508030;Name=Msa0508030
chr3_4 mRNA 55757544 55764966 55757544 ID=Msa0508030-mRNA-1;Parent=Msa0508030;Name=Msa0508030-mRNA-1;_AED=0.19;_eAED=0.19;_QI=91|1|1|1|1|1|8|179|224
chr3_4 exon 55757544 55757774 55757544 ID=Msa0508030-mRNA-1:exon:12478;Parent=Msa0508030-mRNA-1
chr3_4 exon 55757863 55757923 55757863 ID=Msa0508030-mRNA-1:exon:12477;Parent=Msa0508030-mRNA-1
chr3_4 exon 55759945 55760026 55759945 ID=Msa0508030-mRNA-1:exon:12476;Parent=Msa0508030-mRNA-1
chr3_4 exon 55760603 55760664 55760603 ID=Msa0508030-mRNA-1:exon:12475;Parent=Msa0508030-mRNA-1
chr3_4 exon 55760766 55760838 55760766 ID=Msa0508030-mRNA-1:exon:12474;Parent=Msa0508030-mRNA-1
chr3_4 exon 55764157 55764252 55764157 ID=Msa0508030-mRNA-1:exon:12473;Parent=Msa0508030-mRNA-1
chr3_4 exon 55764546 55764680 55764546 ID=Msa0508030-mRNA-1:exon:12472;Parent=Msa0508030-mRNA-1
chr3_4 exon 55764762 55764966 55764762 ID=Msa0508030-mRNA-1:exon:12471;Parent=Msa0508030-mRNA-1
chr3_4 five_prime_UTR 55764876 55764966 55764876 ID=Msa0508030-mRNA-1:five_prime_utr;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55764762 55764875 55764762 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55764546 55764680 55764546 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55764157 55764252 55764157 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55760766 55760838 55760766 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55760603 55760664 55760603 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55759945 55760026 55759945 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55757863 55757923 55757863 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 CDS 55757723 55757774 55757723 ID=Msa0508030-mRNA-1:cds;Parent=Msa0508030-mRNA-1
chr3_4 three_prime_UTR 55757544 55757722 55757544 ID=Msa0508030-mRNA-1:three_prime_utr;Parent=Msa0508030-mRNA-1
Gene Sequence

>Msa0508030

ATGGCTCTTTTTCTGAACGCCTCTTTGCATTCAACTTCCAAACCTCATCACCATCTCTTAAGGTCAACACCTTCCTCTTCAACCTGCTCACCAACTCCTCTTTCTCTTTTTCTGGGAAGCAATCCAAAGCAAACTCACCAAGCATCTCAGAAACTCACATTATCATTCGGTGAATCAGTGTCTAGTGCAGCTCTAGTTGCTCTTCTATCTGCTTCTCTCTTCTTTGTTGATCCTGCACTTGCATTCAAGGGTGGAGGGCCATATGGTCAAGGAGTTACTAGGGGACAAGATCTTTCTGGGAAAGATTTCAGTGGCAAGACACTCATCAAGCAAGACTTCAAAACGTCCATACTGCGTCAAGCCAATTTTAAAGGTGCAAAATTGTTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATACTGATCTTAGAAGTGCAGACTTTTCCCTGGCAAATGTGACAAAGGTAAATTTGAGCAATGCTAATTTGGAAGGTGCACTTGTAACGGGAAATACATCTTTTAAGGGATCCAATATTACAGGCGCCGATTTCACTGATGTGCCGCTCAGAGAAGATCAACGTGAATACCTCTGCAAAATTGCTGATGGAGTGAACTCATCAACTGGAAATGCCACCCGTGATACATTGCTGTGCAATTAA

Protein sequence

>Msa0508030

MALFLNASLHSTSKPHHHLLRSTPSSSTCSPTPLSLFLGSNPKQTHQASQKLTLSFGESVSSAALVALLSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDTDLRSADFSLANVTKVNLSNANLEGALVTGNTSFKGSNITGADFTDVPLREDQREYLCKIADGVNSSTGNATRDTLLCN*