AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0604140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0604140 MtrunA17_Chr4g0033191 98.054 257 5 0 2 258 271 527 0.0 528
Msa0604140 MtrunA17_Chr4g0033201 86.000 250 35 0 2 251 264 513 2.92e-157 447
Msa0604140 MtrunA17_Chr4g0033271 74.800 250 63 0 2 251 263 512 2.78e-139 401
Msa0604140 MtrunA17_Chr2g0329321 66.667 249 83 0 2 250 240 488 1.31e-121 355
Msa0604140 MtrunA17_Chr2g0329201 64.257 249 89 0 2 250 259 507 6.96e-120 352
Msa0604140 MtrunA17_Chr4g0033311 63.492 252 92 0 2 253 267 518 1.01e-118 349
Msa0604140 MtrunA17_Chr2g0329191 63.855 249 90 0 2 250 261 509 1.45e-118 348
Msa0604140 MtrunA17_Chr3g0088441 62.302 252 95 0 2 253 266 517 6.35e-118 347
Msa0604140 MtrunA17_Chr4g0033231 62.151 251 93 1 2 250 243 493 4.89e-114 336
Msa0604140 MtrunA17_Chr6g0482071 61.446 249 96 0 2 250 265 513 1.70e-113 335
Msa0604140 MtrunA17_Chr4g0033261 62.151 251 93 1 2 250 243 493 2.52e-113 334
Msa0604140 MtrunA17_Chr4g0033401 61.134 247 96 0 2 248 262 508 5.93e-112 332
Msa0604140 MtrunA17_Chr6g0482131 58.964 251 103 0 2 252 264 514 9.11e-112 331
Msa0604140 MtrunA17_Chr4g0033331 61.134 247 96 0 2 248 267 513 1.12e-110 328
Msa0604140 MtrunA17_Chr4g0033321 59.919 247 99 0 2 248 261 507 1.19e-109 326
Msa0604140 MtrunA17_Chr4g0033341 58.167 251 104 1 2 251 294 544 3.23e-107 320
Msa0604140 MtrunA17_Chr5g0430451 60.484 248 98 0 3 250 251 498 2.34e-106 317
Msa0604140 MtrunA17_Chr6g0482081 62.651 249 92 1 2 249 264 512 2.19e-105 315
Msa0604140 MtrunA17_Chr2g0301231 54.902 255 107 3 2 250 140 392 1.61e-97 290
Msa0604140 MtrunA17_Chr4g0006111 53.640 261 107 4 2 250 267 525 1.66e-94 287
Msa0604140 MtrunA17_Chr4g0006131 53.307 257 108 5 4 249 245 500 7.52e-91 277
Msa0604140 MtrunA17_Chr3g0087201 51.406 249 116 2 2 250 101 344 1.50e-86 261
Msa0604140 MtrunA17_Chr4g0010501 53.200 250 112 2 1 250 250 494 1.58e-85 263
Msa0604140 MtrunA17_Chr3g0087261 46.000 250 132 2 2 250 262 509 1.17e-76 241
Msa0604140 MtrunA17_Chr3g0087271 46.185 249 133 1 2 250 263 510 4.58e-76 239
Msa0604140 MtrunA17_Chr4g0043091 48.810 252 119 3 4 249 255 502 8.42e-76 238
Msa0604140 MtrunA17_Chr6g0482941 44.800 250 133 3 2 250 267 512 6.23e-69 221
Msa0604140 MtrunA17_Chr6g0482951 45.200 250 132 3 2 250 267 512 8.86e-69 220
Msa0604140 MtrunA17_Chr4g0042171 44.615 260 139 3 2 257 249 507 1.17e-68 220
Msa0604140 MtrunA17_Chr4g0074561 43.775 249 137 3 2 248 263 510 2.65e-67 217
Msa0604140 MtrunA17_Chr4g0074551 43.922 255 140 3 2 254 275 528 1.23e-65 213
Msa0604140 MtrunA17_Chr2g0288071 43.137 255 142 3 2 254 293 546 7.74e-65 211
Msa0604140 MtrunA17_Chr7g0234091 43.922 255 136 3 1 254 289 537 2.70e-64 209
Msa0604140 MtrunA17_Chr3g0090111 41.897 253 141 3 5 255 238 486 2.20e-63 206
Msa0604140 MtrunA17_Chr3g0090131 42.520 254 139 3 5 255 240 489 1.11e-62 204
Msa0604140 MtrunA17_Chr7g0234131 42.339 248 137 2 2 248 290 532 2.77e-61 201
Msa0604140 MtrunA17_Chr7g0234111 44.578 249 131 3 1 248 289 531 2.87e-60 199
Msa0604140 MtrunA17_Chr2g0317841 40.078 257 146 3 2 254 257 509 1.66e-59 196
Msa0604140 MtrunA17_Chr2g0317821 39.689 257 147 3 2 254 257 509 2.11e-58 194
Msa0604140 MtrunA17_Chr2g0288021 37.450 251 154 2 2 250 260 509 1.59e-55 186
Msa0604140 MtrunA17_Chr7g0242681 39.844 256 128 7 2 249 263 500 2.26e-48 167
Msa0604140 MtrunA17_Chr7g0242691 36.965 257 137 5 2 250 256 495 2.99e-47 164
Msa0604140 MtrunA17_Chr5g0428831 35.573 253 148 5 2 251 251 491 1.05e-43 154
Msa0604140 MtrunA17_Chr4g0006971 34.109 258 155 5 2 256 252 497 4.78e-42 150
Msa0604140 MtrunA17_Chr7g0230651 44.330 194 98 4 2 195 193 376 6.05e-42 147
Msa0604140 MtrunA17_Chr1g0195611 34.387 253 150 4 2 251 251 490 3.79e-40 145
Msa0604140 MtrunA17_Chr5g0418861 58.427 89 36 1 161 248 2 90 2.27e-29 106
Msa0604140 MtrunA17_Chr5g0418871 52.222 90 43 0 2 91 208 297 1.76e-26 105
Msa0604140 MtrunA17_Chr7g0236731 52.083 96 46 0 1 96 161 256 1.13e-25 102
Msa0604140 MtrunA17_Chr8g0352881 43.878 98 55 0 2 99 59 156 1.62e-23 93.2
Msa0604140 MtrunA17_Chr1g0195641 35.625 160 94 3 2 159 251 403 2.05e-21 92.4
Msa0604140 MtrunA17_Chr7g0227591 54.386 57 26 0 196 252 13 69 3.08e-15 68.6
Msa0604140 MtrunA17_Chr4g0068871 31.111 180 88 5 72 248 386 532 3.04e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0604140 AT2G44480.5 46.000 250 135 0 2 251 56 305 5.42e-81 246
Msa0604140 AT2G44450.2 48.800 250 121 3 2 250 108 351 1.29e-80 246
Msa0604140 AT3G60130.2 51.394 251 116 3 2 251 206 451 1.08e-79 248
Msa0604140 AT2G44480.2 46.000 250 135 0 2 251 160 409 2.38e-79 245
Msa0604140 AT3G60130.1 51.394 251 116 3 2 251 258 503 8.66e-79 246
Msa0604140 AT2G44450.1 48.800 250 121 3 2 250 259 502 1.34e-78 246
Msa0604140 AT2G44480.1 46.000 250 135 0 2 251 262 511 3.68e-78 245
Msa0604140 AT2G44480.3 46.000 250 135 0 2 251 293 542 9.93e-78 245
Msa0604140 AT5G44640.1 48.800 250 122 3 2 250 259 503 1.09e-77 244
Msa0604140 AT5G42260.1 49.590 244 117 3 2 244 259 497 2.27e-76 240
Msa0604140 AT1G26560.1 46.063 254 132 4 2 251 257 509 1.76e-71 228
Msa0604140 AT5G54570.2 44.841 252 134 3 1 248 158 408 1.00e-70 224
Msa0604140 AT5G24550.1 45.669 254 134 4 2 251 259 512 1.05e-70 226
Msa0604140 AT3G60130.3 49.004 251 111 4 2 251 206 440 1.09e-70 224
Msa0604140 AT3G18070.7 43.254 252 135 5 2 250 63 309 1.95e-70 219
Msa0604140 AT5G54570.1 45.238 252 133 4 1 248 255 505 9.89e-70 224
Msa0604140 AT5G24540.1 45.669 254 134 4 2 251 259 512 1.08e-69 224
Msa0604140 AT3G60120.1 45.600 250 127 5 7 250 245 491 1.43e-69 223
Msa0604140 AT3G18080.1 45.635 252 131 4 2 251 263 510 2.01e-69 222
Msa0604140 AT3G18070.2 43.254 252 135 5 2 250 175 421 4.58e-69 219
Msa0604140 AT2G44460.2 45.490 255 134 4 4 254 111 364 7.72e-69 219
Msa0604140 AT3G18070.3 43.254 252 135 5 2 250 246 492 2.23e-68 219
Msa0604140 AT3G18070.1 43.254 252 135 5 2 250 252 498 3.76e-68 219
Msa0604140 AT2G44460.1 45.490 255 134 4 4 254 257 510 2.16e-67 219
Msa0604140 AT1G51470.1 43.200 250 137 3 2 250 266 511 2.77e-67 217
Msa0604140 AT5G36890.2 43.922 255 142 1 2 255 232 486 1.51e-66 214
Msa0604140 AT5G36890.1 43.922 255 142 1 2 255 232 486 1.80e-66 214
Msa0604140 AT1G47600.1 42.126 254 134 4 2 250 266 511 4.00e-65 211
Msa0604140 AT2G25630.1 45.968 248 111 4 2 248 258 483 6.40e-65 210
Msa0604140 AT3G60140.1 41.732 254 145 3 2 252 253 506 1.17e-64 211
Msa0604140 AT1G47600.2 41.732 254 134 4 2 250 266 510 3.81e-64 209
Msa0604140 AT2G44470.3 43.083 253 133 4 5 250 259 507 4.64e-64 210
Msa0604140 AT2G44490.1 42.023 257 144 4 7 258 246 502 1.02e-63 209
Msa0604140 AT1G61820.3 42.126 254 143 3 2 252 117 369 3.52e-62 200
Msa0604140 AT1G61820.1 42.126 254 143 3 2 252 256 508 1.16e-60 199
Msa0604140 AT5G25980.2 43.243 259 132 8 5 255 278 529 1.00e-59 198
Msa0604140 AT4G21760.2 38.956 249 144 3 2 248 279 521 6.18e-59 196
Msa0604140 AT2G32860.2 40.157 254 148 4 7 256 327 580 1.69e-58 196
Msa0604140 AT2G32860.1 40.316 253 147 4 7 256 328 579 1.98e-58 196
Msa0604140 AT1G61810.5 38.521 257 154 3 2 255 159 414 2.90e-56 186
Msa0604140 AT3G03640.1 39.357 249 146 3 7 250 266 514 5.74e-56 187
Msa0604140 AT1G61810.1 38.521 257 154 3 2 255 259 514 2.27e-55 186
Msa0604140 AT5G26000.1 41.016 256 128 8 5 248 267 511 5.03e-54 182
Msa0604140 AT1G75940.1 40.486 247 142 4 7 248 271 517 9.93e-54 182
Msa0604140 AT5G28510.1 39.130 253 145 4 7 253 275 524 1.67e-53 181
Msa0604140 AT1G66280.1 40.000 255 150 3 2 253 261 515 3.10e-53 180
Msa0604140 AT3G21370.1 40.637 251 136 6 7 249 267 512 4.47e-53 180
Msa0604140 AT4G21760.1 37.751 249 137 4 2 248 279 511 2.25e-52 178
Msa0604140 AT1G66270.2 38.431 255 154 3 2 253 259 513 8.04e-52 176
Msa0604140 AT1G66270.1 38.431 255 154 3 2 253 261 515 9.14e-52 176
Msa0604140 AT3G09260.1 39.600 250 148 3 7 253 266 515 3.72e-51 175
Msa0604140 AT1G52400.3 39.676 247 142 6 7 249 273 516 1.22e-50 173
Msa0604140 AT1G52400.1 39.676 247 142 6 7 249 273 516 1.22e-50 173
Msa0604140 AT1G02850.5 39.453 256 133 6 2 251 272 511 1.45e-50 173
Msa0604140 AT1G02850.2 39.216 255 133 6 5 253 252 490 2.63e-50 172
Msa0604140 AT1G02850.4 39.300 257 133 7 2 251 272 512 9.24e-49 168
Msa0604140 AT1G61810.3 38.819 237 141 3 2 235 259 494 1.32e-48 168
Msa0604140 AT4G27830.2 36.863 255 144 6 2 252 159 400 6.66e-48 164
Msa0604140 AT4G27830.1 36.863 255 144 6 2 252 247 488 3.50e-47 164
Msa0604140 AT4G27820.2 36.508 252 144 5 5 252 162 401 6.38e-47 161
Msa0604140 AT4G27820.3 36.508 252 144 5 5 252 162 401 6.38e-47 161
Msa0604140 AT5G54570.3 42.079 202 103 2 2 195 256 451 8.15e-47 162
Msa0604140 AT3G62750.6 36.614 254 147 4 2 252 150 392 1.17e-46 160
Msa0604140 AT3G62750.5 36.614 254 147 4 2 252 150 392 1.17e-46 160
Msa0604140 AT5G48375.1 36.515 241 119 3 2 241 232 439 1.33e-46 161
Msa0604140 AT4G22100.1 38.645 251 136 6 5 249 245 483 2.85e-46 161
Msa0604140 AT4G27820.1 36.508 252 144 5 5 252 247 486 3.72e-46 161
Msa0604140 AT1G02850.1 40.426 235 118 6 25 253 245 463 3.93e-46 160
Msa0604140 AT3G62750.1 36.759 253 146 4 2 251 235 476 8.04e-46 160
Msa0604140 AT3G62750.2 36.614 254 147 4 2 252 261 503 1.06e-45 160
Msa0604140 AT1G45191.4 36.992 246 141 5 5 249 252 484 4.10e-45 158
Msa0604140 AT1G60090.2 36.000 250 142 6 5 249 247 483 2.21e-43 154
Msa0604140 AT3G62740.1 33.333 270 153 5 2 257 241 497 5.54e-43 152
Msa0604140 AT1G45191.2 36.145 249 145 5 5 249 252 490 7.79e-43 152
Msa0604140 AT5G24540.2 40.816 196 113 3 2 194 259 454 1.84e-42 150
Msa0604140 AT1G45191.6 36.111 252 146 4 5 249 252 495 3.26e-42 151
Msa0604140 AT1G45191.1 36.111 252 146 4 5 249 264 507 3.52e-42 151
Msa0604140 AT2G44470.1 40.816 196 106 3 5 194 259 450 3.88e-41 147
Msa0604140 AT5G25980.3 42.640 197 100 6 5 195 278 467 1.00e-40 146
Msa0604140 AT5G25980.1 42.640 197 100 6 5 195 278 467 1.00e-40 146
Msa0604140 AT1G60090.1 34.783 253 148 7 5 249 247 490 5.21e-40 145
Msa0604140 AT3G18070.6 38.750 160 95 2 2 159 63 221 4.82e-37 130
Msa0604140 AT3G18070.5 38.750 160 95 2 2 159 175 333 1.11e-35 130
Msa0604140 AT5G26000.2 37.000 200 107 5 5 195 267 456 6.10e-35 130
Msa0604140 AT3G60140.2 37.195 164 101 2 2 163 253 416 5.16e-33 125
Msa0604140 AT5G16580.1 35.644 202 120 6 5 205 107 299 1.47e-30 115
Msa0604140 AT3G62750.4 35.354 198 115 3 2 197 261 447 9.18e-29 113
Msa0604140 AT1G52400.2 36.649 191 115 5 7 194 273 460 1.01e-27 110
Msa0604140 AT3G62740.2 33.163 196 115 3 2 194 241 423 2.31e-27 109
Msa0604140 AT1G02850.3 36.810 163 88 3 2 159 272 424 9.09e-26 105
Msa0604140 AT1G61810.4 33.540 161 104 2 2 159 259 419 1.18e-24 102
Msa0604140 AT2G44470.2 41.667 120 64 2 5 118 259 378 2.21e-23 98.2
Msa0604140 AT3G18070.4 45.652 92 50 0 2 93 252 343 5.73e-23 97.1
Msa0604140 AT1G60270.2 46.341 82 44 0 5 86 161 242 3.58e-20 87.8
Msa0604140 AT1G60270.1 46.341 82 44 0 5 86 248 329 9.68e-20 87.8
Msa0604140 AT2G44480.4 48.193 83 42 1 2 84 293 374 2.00e-19 87.0
Msa0604140 AT3G62750.7 40.426 94 56 0 2 95 235 328 2.49e-19 86.7
Msa0604140 AT3G62750.8 40.426 94 56 0 2 95 235 328 2.49e-19 86.7
Msa0604140 AT3G62750.3 40.426 94 56 0 2 95 261 354 3.20e-19 86.7
Msa0604140 AT1G45191.5 41.573 89 52 0 5 93 252 340 4.52e-18 83.2
Msa0604140 AT1G45191.3 41.573 89 52 0 5 93 252 340 4.67e-18 83.2
Msa0604140 AT1G51490.1 37.903 124 68 3 2 122 240 357 1.13e-14 73.6
Msa0604140 AT3G06510.1 30.857 175 85 6 78 249 369 510 9.39e-14 71.2
Msa0604140 AT3G06510.2 29.897 194 96 6 78 249 369 544 3.25e-13 69.3

Find 61 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATCTCAATATGGTATAAT+AGG 0.209400 4_2:-49327893 Msa0604140:CDS
CGATTCTATAAGTATCTAAA+AGG 0.249841 4_2:+49326721 None:intergenic
ATAATATACATTACTGAAAA+TGG 0.254622 4_2:-49326884 Msa0604140:intron
TATAGCTATTCTCCATAAAA+AGG 0.308127 4_2:+49326057 None:intergenic
AAGATCCTCGGATTCTTCTT+TGG 0.311879 4_2:+49327397 None:intergenic
AACCAATGTGCCGAGAGTTT+TGG 0.337227 4_2:+49326397 None:intergenic
TGCATTTATCCGAGAGGATT+AGG 0.340389 4_2:-49326947 Msa0604140:CDS
CGAGGCCTCGACTTCATGTT+TGG 0.348528 4_2:-49327803 Msa0604140:CDS
AGAAGAATCCGAGGATCTTA+AGG 0.358352 4_2:-49327393 Msa0604140:CDS
GATTCTTCGAGTGACAGTTT+TGG 0.360269 4_2:+49326744 None:intergenic
TCTGGCTTCAGCTTGCGATT+TGG 0.362792 4_2:-49326460 Msa0604140:CDS
GATAAGAGAGTCAGTTTGTA+TGG 0.374381 4_2:+49327289 None:intergenic
TGAAGCCAGATTCCCATTCA+TGG 0.380755 4_2:+49326473 None:intergenic
AGGATTAGAAAATAGTGATA+TGG 0.390437 4_2:-49326320 Msa0604140:three_prime_UTR
GTCAGTTTGTATGGCTGGTC+TGG 0.402360 4_2:+49327298 None:intergenic
GATAACCATGAATGGGAATC+TGG 0.405714 4_2:-49326478 Msa0604140:CDS
CATCTCAATATGGTATAATA+GGG 0.411825 4_2:-49327892 Msa0604140:CDS
AGGTGCATCAGCAGCATAAG+AGG 0.414938 4_2:+49327334 None:intergenic
AAGAGGAAGAGTAATAGTTT+AGG 0.433722 4_2:+49327351 None:intergenic
TGTTCTGTTTAAATGAACTT+AGG 0.434940 4_2:-49326340 Msa0604140:exon
AGGGAAGGTGTGAATGTAAA+GGG 0.435489 4_2:-49326523 Msa0604140:CDS
GCGATTTGGACTCGTCTTTG+TGG 0.435971 4_2:-49326446 Msa0604140:CDS
GAAATGCAGGCATCTCAATA+TGG 0.438902 4_2:-49327902 Msa0604140:CDS
ATTATGTTCAAGCTGCAATC+AGG 0.440754 4_2:-49326677 Msa0604140:intron
TATTCTTGACGTGAAGCAAC+AGG 0.444841 4_2:+49326921 None:intergenic
GGATTACCTTACTCTCTCAT+TGG 0.457583 4_2:-49327871 Msa0604140:CDS
CTTTGGAGAACTTTGGTAGC+CGG 0.461441 4_2:+49327414 None:intergenic
GAAGAATCCGAGGATCTTAA+GGG 0.463005 4_2:-49327392 Msa0604140:CDS
AGAGAGTCAGTTTGTATGGC+TGG 0.463847 4_2:+49327293 None:intergenic
GATTCTTCTTTGGAGAACTT+TGG 0.475194 4_2:+49327407 None:intergenic
TGCGATCTTTGGTTGGAAGC+CGG 0.484554 4_2:-49327433 Msa0604140:CDS
CATCGTGATGGCAAGCCCCT+TGG 0.493086 4_2:-49327118 Msa0604140:CDS
CAGGGAAGGTGTGAATGTAA+AGG 0.498317 4_2:-49326524 Msa0604140:CDS
CTCATACCAATGAGAGAGTA+AGG 0.499326 4_2:+49327865 None:intergenic
TATATGGATCCAATCACAAA+AGG 0.510867 4_2:-49327473 Msa0604140:CDS
CATTGTTGGATAACCATGAA+TGG 0.514197 4_2:-49326486 Msa0604140:CDS
ATTGTTGGATAACCATGAAT+GGG 0.522990 4_2:-49326485 Msa0604140:CDS
TCTGCTTTCGCTTGAGAGGC+CGG 0.524404 4_2:+49327842 None:intergenic
AACATCTGCTTTCGCTTGAG+AGG 0.524538 4_2:+49327838 None:intergenic
AACAGGTTTCCTAATCCTCT+CGG 0.530574 4_2:+49326938 None:intergenic
ACTCTCTCATTGGTATGAGC+CGG 0.532738 4_2:-49327861 Msa0604140:CDS
TGGCAAGCCCCTTGGTCCAA+TGG 0.533454 4_2:-49327110 Msa0604140:intron
GATTCTATAAGTATCTAAAA+GGG 0.541771 4_2:+49326722 None:intergenic
AATATATACCATTGGACCAA+GGG 0.544956 4_2:+49327102 None:intergenic
AAAAGCATGCGATCTTTGGT+TGG 0.548161 4_2:-49327440 Msa0604140:CDS
TCGATGACAGTTCATCGTGA+TGG 0.548253 4_2:-49327130 Msa0604140:intron
GCCTCGACTTCATGTTTGGA+TGG 0.549073 4_2:-49327799 Msa0604140:intron
TTTCAGTAATGTATATTATG+GGG 0.565878 4_2:+49326888 None:intergenic
ATATGCAGTCTGCTTCAAGT+TGG 0.568943 4_2:-49326973 Msa0604140:intron
GAAAAGACACCCAAAACTCT+CGG 0.586397 4_2:-49326407 Msa0604140:CDS
AAATATATACCATTGGACCA+AGG 0.598574 4_2:+49327101 None:intergenic
ACCCAAAACTCTCGGCACAT+TGG 0.602316 4_2:-49326399 Msa0604140:CDS
GTTTAGGCCAAGAAAATCGA+AGG 0.606609 4_2:+49327367 None:intergenic
GAAGGACCCCTTAAGATCCT+CGG 0.611639 4_2:+49327385 None:intergenic
GGTCTGGCATCGCGTAAGTG+AGG 0.617392 4_2:+49327314 None:intergenic
ATATATACCATTGGACCAAG+GGG 0.639799 4_2:+49327103 None:intergenic
ACCATCCAAACATGAAGTCG+AGG 0.641696 4_2:+49327798 None:intergenic
GTTCTCCAAAGAAGAATCCG+AGG 0.647399 4_2:-49327402 Msa0604140:CDS
TGGTTATGCATTTATCCGAG+AGG 0.653174 4_2:-49326953 Msa0604140:CDS
AAGAATCCGAGGATCTTAAG+GGG 0.674534 4_2:-49327391 Msa0604140:CDS
GATGTTGATGCTGCACAACG+AGG 0.729333 4_2:-49327821 Msa0604140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGATAAAATATATACCAT+TGG + chr4_2:49326874-49326893 None:intergenic 15.0%
!!! TTTTCAGTAATGTATATTAT+GGG + chr4_2:49327081-49327100 None:intergenic 15.0%
!!! ATTTTCAGTAATGTATATTA+TGG + chr4_2:49327082-49327101 None:intergenic 15.0%
!! ATAATATACATTACTGAAAA+TGG - chr4_2:49327081-49327100 Msa0604140:intron 15.0%
!! AATAATAGGTAAATGTAAAA+AGG + chr4_2:49327406-49327425 None:intergenic 15.0%
!! GAAAAAAAATTGTCAATAAA+AGG - chr4_2:49327701-49327720 Msa0604140:intron 15.0%
!! AATGATAAAATATATACCAT+TGG + chr4_2:49326874-49326893 None:intergenic 15.0%
!!! TTTTCAGTAATGTATATTAT+GGG + chr4_2:49327081-49327100 None:intergenic 15.0%
!!! ATTTTCAGTAATGTATATTA+TGG + chr4_2:49327082-49327101 None:intergenic 15.0%
!! ATAATATACATTACTGAAAA+TGG - chr4_2:49327081-49327100 Msa0604140:intron 15.0%
!! AATAATAGGTAAATGTAAAA+AGG + chr4_2:49327406-49327425 None:intergenic 15.0%
!! GAAAAAAAATTGTCAATAAA+AGG - chr4_2:49327701-49327720 Msa0604140:intron 15.0%
!!! ATGTAAACTTCATTTGATTT+TGG - chr4_2:49326316-49326335 Msa0604140:three_prime_UTR 20.0%
!! TTTCAGTAATGTATATTATG+GGG + chr4_2:49327080-49327099 None:intergenic 20.0%
!! GATTCTATAAGTATCTAAAA+GGG + chr4_2:49327246-49327265 None:intergenic 20.0%
!!! ATGTAAACTTCATTTGATTT+TGG - chr4_2:49326316-49326335 Msa0604140:three_prime_UTR 20.0%
!! TTTCAGTAATGTATATTATG+GGG + chr4_2:49327080-49327099 None:intergenic 20.0%
!! GATTCTATAAGTATCTAAAA+GGG + chr4_2:49327246-49327265 None:intergenic 20.0%
! CATCTCAATATGGTATAATA+GGG - chr4_2:49326073-49326092 Msa0604140:three_prime_UTR 25.0%
! ATGATATGATCATGATAATC+TGG - chr4_2:49326283-49326302 Msa0604140:three_prime_UTR 25.0%
! ATTACTTTACTTTGCACAAA+TGG + chr4_2:49326409-49326428 None:intergenic 25.0%
! TTTGTGCAAAGTAAAGTAAT+AGG - chr4_2:49326409-49326428 Msa0604140:CDS 25.0%
! CGATTCTATAAGTATCTAAA+AGG + chr4_2:49327247-49327266 None:intergenic 25.0%
! TAGGTAAATGTAAAAAGGAA+GGG + chr4_2:49327401-49327420 None:intergenic 25.0%
! ATAGGTAAATGTAAAAAGGA+AGG + chr4_2:49327402-49327421 None:intergenic 25.0%
! TATGCATAAAGGTCAATAAT+AGG + chr4_2:49327420-49327439 None:intergenic 25.0%
!! TTTAAACAGAACACTTTTCT+TGG + chr4_2:49327618-49327637 None:intergenic 25.0%
! TGTTCTGTTTAAATGAACTT+AGG - chr4_2:49327625-49327644 Msa0604140:intron 25.0%
! AGGATTAGAAAATAGTGATA+TGG - chr4_2:49327645-49327664 Msa0604140:intron 25.0%
!! CTATTTGTGTAACCTTTTTA+TGG - chr4_2:49327896-49327915 Msa0604140:CDS 25.0%
! CATCTCAATATGGTATAATA+GGG - chr4_2:49326073-49326092 Msa0604140:three_prime_UTR 25.0%
! ATGATATGATCATGATAATC+TGG - chr4_2:49326283-49326302 Msa0604140:three_prime_UTR 25.0%
! ATTACTTTACTTTGCACAAA+TGG + chr4_2:49326409-49326428 None:intergenic 25.0%
! TTTGTGCAAAGTAAAGTAAT+AGG - chr4_2:49326409-49326428 Msa0604140:CDS 25.0%
! CGATTCTATAAGTATCTAAA+AGG + chr4_2:49327247-49327266 None:intergenic 25.0%
! TAGGTAAATGTAAAAAGGAA+GGG + chr4_2:49327401-49327420 None:intergenic 25.0%
! ATAGGTAAATGTAAAAAGGA+AGG + chr4_2:49327402-49327421 None:intergenic 25.0%
! TATGCATAAAGGTCAATAAT+AGG + chr4_2:49327420-49327439 None:intergenic 25.0%
!! TTTAAACAGAACACTTTTCT+TGG + chr4_2:49327618-49327637 None:intergenic 25.0%
! TGTTCTGTTTAAATGAACTT+AGG - chr4_2:49327625-49327644 Msa0604140:intron 25.0%
! AGGATTAGAAAATAGTGATA+TGG - chr4_2:49327645-49327664 Msa0604140:intron 25.0%
!! CTATTTGTGTAACCTTTTTA+TGG - chr4_2:49327896-49327915 Msa0604140:CDS 25.0%
GCATCTCAATATGGTATAAT+AGG - chr4_2:49326072-49326091 Msa0604140:three_prime_UTR 30.0%
!!! GCATTTTGCATTTTTTCTGT+AGG - chr4_2:49326469-49326488 Msa0604140:CDS 30.0%
!!! GCATTTTTTCTGTAGGTATA+TGG - chr4_2:49326476-49326495 Msa0604140:CDS 30.0%
TATATGGATCCAATCACAAA+AGG - chr4_2:49326492-49326511 Msa0604140:CDS 30.0%
AAGAGGAAGAGTAATAGTTT+AGG + chr4_2:49326617-49326636 None:intergenic 30.0%
AATATATACCATTGGACCAA+GGG + chr4_2:49326866-49326885 None:intergenic 30.0%
AAATATATACCATTGGACCA+AGG + chr4_2:49326867-49326886 None:intergenic 30.0%
!! GCTTCTAGTTATTGATTTGT+AGG - chr4_2:49327341-49327360 Msa0604140:CDS 30.0%
TATTGACCTTTATGCATAAC+AGG - chr4_2:49327422-49327441 Msa0604140:CDS 30.0%
ATTGACCTTTATGCATAACA+GGG - chr4_2:49327423-49327442 Msa0604140:CDS 30.0%
! ATGTAAAGGGATATTTTGCA+TGG - chr4_2:49327455-49327474 Msa0604140:CDS 30.0%
! ATATTTTGCATGGTCATTGT+TGG - chr4_2:49327465-49327484 Msa0604140:CDS 30.0%
ATTGTTGGATAACCATGAAT+GGG - chr4_2:49327480-49327499 Msa0604140:intron 30.0%
!!! TTTCTTGGCAAGATTTTTTG+AGG + chr4_2:49327603-49327622 None:intergenic 30.0%
GCATCTCAATATGGTATAAT+AGG - chr4_2:49326072-49326091 Msa0604140:three_prime_UTR 30.0%
!!! GCATTTTGCATTTTTTCTGT+AGG - chr4_2:49326469-49326488 Msa0604140:CDS 30.0%
!!! GCATTTTTTCTGTAGGTATA+TGG - chr4_2:49326476-49326495 Msa0604140:CDS 30.0%
TATATGGATCCAATCACAAA+AGG - chr4_2:49326492-49326511 Msa0604140:CDS 30.0%
AAGAGGAAGAGTAATAGTTT+AGG + chr4_2:49326617-49326636 None:intergenic 30.0%
AATATATACCATTGGACCAA+GGG + chr4_2:49326866-49326885 None:intergenic 30.0%
AAATATATACCATTGGACCA+AGG + chr4_2:49326867-49326886 None:intergenic 30.0%
!! GCTTCTAGTTATTGATTTGT+AGG - chr4_2:49327341-49327360 Msa0604140:CDS 30.0%
TATTGACCTTTATGCATAAC+AGG - chr4_2:49327422-49327441 Msa0604140:CDS 30.0%
ATTGACCTTTATGCATAACA+GGG - chr4_2:49327423-49327442 Msa0604140:CDS 30.0%
! ATGTAAAGGGATATTTTGCA+TGG - chr4_2:49327455-49327474 Msa0604140:CDS 30.0%
! ATATTTTGCATGGTCATTGT+TGG - chr4_2:49327465-49327484 Msa0604140:CDS 30.0%
ATTGTTGGATAACCATGAAT+GGG - chr4_2:49327480-49327499 Msa0604140:intron 30.0%
!!! TTTCTTGGCAAGATTTTTTG+AGG + chr4_2:49327603-49327622 None:intergenic 30.0%
TATTCGTAGCTCAACACTAA+CGG - chr4_2:49326206-49326225 Msa0604140:three_prime_UTR 35.0%
! GGATAGTTTCCTTTTGTGAT+TGG + chr4_2:49326504-49326523 None:intergenic 35.0%
! GATTCTTCTTTGGAGAACTT+TGG + chr4_2:49326561-49326580 None:intergenic 35.0%
GATAAGAGAGTCAGTTTGTA+TGG + chr4_2:49326679-49326698 None:intergenic 35.0%
ATATATACCATTGGACCAAG+GGG + chr4_2:49326865-49326884 None:intergenic 35.0%
GTGTGACAAAATCCATTGAT+AGG - chr4_2:49327179-49327198 Msa0604140:intron 35.0%
ATTATGTTCAAGCTGCAATC+AGG - chr4_2:49327288-49327307 Msa0604140:CDS 35.0%
ATCAATAACTAGAAGCCTAG+AGG + chr4_2:49327337-49327356 None:intergenic 35.0%
CATTGTTGGATAACCATGAA+TGG - chr4_2:49327479-49327498 Msa0604140:intron 35.0%
TATTCGTAGCTCAACACTAA+CGG - chr4_2:49326206-49326225 Msa0604140:three_prime_UTR 35.0%
! GGATAGTTTCCTTTTGTGAT+TGG + chr4_2:49326504-49326523 None:intergenic 35.0%
! GATTCTTCTTTGGAGAACTT+TGG + chr4_2:49326561-49326580 None:intergenic 35.0%
GATAAGAGAGTCAGTTTGTA+TGG + chr4_2:49326679-49326698 None:intergenic 35.0%
ATATATACCATTGGACCAAG+GGG + chr4_2:49326865-49326884 None:intergenic 35.0%
GTGTGACAAAATCCATTGAT+AGG - chr4_2:49327179-49327198 Msa0604140:intron 35.0%
ATTATGTTCAAGCTGCAATC+AGG - chr4_2:49327288-49327307 Msa0604140:CDS 35.0%
ATCAATAACTAGAAGCCTAG+AGG + chr4_2:49327337-49327356 None:intergenic 35.0%
CATTGTTGGATAACCATGAA+TGG - chr4_2:49327479-49327498 Msa0604140:intron 35.0%
GGATTACCTTACTCTCTCAT+TGG - chr4_2:49326094-49326113 Msa0604140:three_prime_UTR 40.0%
CTCATACCAATGAGAGAGTA+AGG + chr4_2:49326103-49326122 None:intergenic 40.0%
! TCCAAAAAGCATGCGATCTT+TGG - chr4_2:49326521-49326540 Msa0604140:CDS 40.0%
! ACCAAAGATCGCATGCTTTT+TGG + chr4_2:49326525-49326544 None:intergenic 40.0%
! AAAAGCATGCGATCTTTGGT+TGG - chr4_2:49326525-49326544 Msa0604140:intron 40.0%
AAGATCCTCGGATTCTTCTT+TGG + chr4_2:49326571-49326590 None:intergenic 40.0%
AGAAGAATCCGAGGATCTTA+AGG - chr4_2:49326572-49326591 Msa0604140:intron 40.0%
GAAGAATCCGAGGATCTTAA+GGG - chr4_2:49326573-49326592 Msa0604140:intron 40.0%
AAGAATCCGAGGATCTTAAG+GGG - chr4_2:49326574-49326593 Msa0604140:intron 40.0%
GTTTAGGCCAAGAAAATCGA+AGG + chr4_2:49326601-49326620 None:intergenic 40.0%
ATATGCAGTCTGCTTCAAGT+TGG - chr4_2:49326992-49327011 Msa0604140:intron 40.0%
TGGTTATGCATTTATCCGAG+AGG - chr4_2:49327012-49327031 Msa0604140:intron 40.0%
TGCATTTATCCGAGAGGATT+AGG - chr4_2:49327018-49327037 Msa0604140:intron 40.0%
AACAGGTTTCCTAATCCTCT+CGG + chr4_2:49327030-49327049 None:intergenic 40.0%
TATTCTTGACGTGAAGCAAC+AGG + chr4_2:49327047-49327066 None:intergenic 40.0%
AACTCATCACGACCTATCAA+TGG + chr4_2:49327194-49327213 None:intergenic 40.0%
! GATTCTTCGAGTGACAGTTT+TGG + chr4_2:49327224-49327243 None:intergenic 40.0%
ACCTTTATGCATAACAGGGA+AGG - chr4_2:49327427-49327446 Msa0604140:CDS 40.0%
ACCTTCCCTGTTATGCATAA+AGG + chr4_2:49327431-49327450 None:intergenic 40.0%
! AGGGAAGGTGTGAATGTAAA+GGG - chr4_2:49327442-49327461 Msa0604140:CDS 40.0%
GATAACCATGAATGGGAATC+TGG - chr4_2:49327487-49327506 Msa0604140:intron 40.0%
GAAAAGACACCCAAAACTCT+CGG - chr4_2:49327558-49327577 Msa0604140:intron 40.0%
GGATTACCTTACTCTCTCAT+TGG - chr4_2:49326094-49326113 Msa0604140:three_prime_UTR 40.0%
CTCATACCAATGAGAGAGTA+AGG + chr4_2:49326103-49326122 None:intergenic 40.0%
! TCCAAAAAGCATGCGATCTT+TGG - chr4_2:49326521-49326540 Msa0604140:CDS 40.0%
! ACCAAAGATCGCATGCTTTT+TGG + chr4_2:49326525-49326544 None:intergenic 40.0%
! AAAAGCATGCGATCTTTGGT+TGG - chr4_2:49326525-49326544 Msa0604140:intron 40.0%
AAGATCCTCGGATTCTTCTT+TGG + chr4_2:49326571-49326590 None:intergenic 40.0%
AGAAGAATCCGAGGATCTTA+AGG - chr4_2:49326572-49326591 Msa0604140:intron 40.0%
GAAGAATCCGAGGATCTTAA+GGG - chr4_2:49326573-49326592 Msa0604140:intron 40.0%
AAGAATCCGAGGATCTTAAG+GGG - chr4_2:49326574-49326593 Msa0604140:intron 40.0%
GTTTAGGCCAAGAAAATCGA+AGG + chr4_2:49326601-49326620 None:intergenic 40.0%
ATATGCAGTCTGCTTCAAGT+TGG - chr4_2:49326992-49327011 Msa0604140:intron 40.0%
TGGTTATGCATTTATCCGAG+AGG - chr4_2:49327012-49327031 Msa0604140:intron 40.0%
TGCATTTATCCGAGAGGATT+AGG - chr4_2:49327018-49327037 Msa0604140:intron 40.0%
AACAGGTTTCCTAATCCTCT+CGG + chr4_2:49327030-49327049 None:intergenic 40.0%
TATTCTTGACGTGAAGCAAC+AGG + chr4_2:49327047-49327066 None:intergenic 40.0%
AACTCATCACGACCTATCAA+TGG + chr4_2:49327194-49327213 None:intergenic 40.0%
! GATTCTTCGAGTGACAGTTT+TGG + chr4_2:49327224-49327243 None:intergenic 40.0%
ACCTTTATGCATAACAGGGA+AGG - chr4_2:49327427-49327446 Msa0604140:CDS 40.0%
ACCTTCCCTGTTATGCATAA+AGG + chr4_2:49327431-49327450 None:intergenic 40.0%
! AGGGAAGGTGTGAATGTAAA+GGG - chr4_2:49327442-49327461 Msa0604140:CDS 40.0%
GATAACCATGAATGGGAATC+TGG - chr4_2:49327487-49327506 Msa0604140:intron 40.0%
GAAAAGACACCCAAAACTCT+CGG - chr4_2:49327558-49327577 Msa0604140:intron 40.0%
ACTCTCTCATTGGTATGAGC+CGG - chr4_2:49326104-49326123 Msa0604140:three_prime_UTR 45.0%
AACATCTGCTTTCGCTTGAG+AGG + chr4_2:49326130-49326149 None:intergenic 45.0%
ACCATCCAAACATGAAGTCG+AGG + chr4_2:49326170-49326189 None:intergenic 45.0%
! CTTTGGAGAACTTTGGTAGC+CGG + chr4_2:49326554-49326573 None:intergenic 45.0%
GTTCTCCAAAGAAGAATCCG+AGG - chr4_2:49326563-49326582 Msa0604140:intron 45.0%
! AAGGGGTCCTTCGATTTTCT+TGG - chr4_2:49326591-49326610 Msa0604140:intron 45.0%
AGAGAGTCAGTTTGTATGGC+TGG + chr4_2:49326675-49326694 None:intergenic 45.0%
TCGATGACAGTTCATCGTGA+TGG - chr4_2:49326835-49326854 Msa0604140:intron 45.0%
GCTTTATCTGAAGAGCCTCT+AGG - chr4_2:49327319-49327338 Msa0604140:CDS 45.0%
! CAGGGAAGGTGTGAATGTAA+AGG - chr4_2:49327441-49327460 Msa0604140:CDS 45.0%
TGAAGCCAGATTCCCATTCA+TGG + chr4_2:49327495-49327514 None:intergenic 45.0%
! ACCAATGTGCCGAGAGTTTT+GGG + chr4_2:49327570-49327589 None:intergenic 45.0%
! AACCAATGTGCCGAGAGTTT+TGG + chr4_2:49327571-49327590 None:intergenic 45.0%
ACTCTCTCATTGGTATGAGC+CGG - chr4_2:49326104-49326123 Msa0604140:three_prime_UTR 45.0%
AACATCTGCTTTCGCTTGAG+AGG + chr4_2:49326130-49326149 None:intergenic 45.0%
ACCATCCAAACATGAAGTCG+AGG + chr4_2:49326170-49326189 None:intergenic 45.0%
! CTTTGGAGAACTTTGGTAGC+CGG + chr4_2:49326554-49326573 None:intergenic 45.0%
GTTCTCCAAAGAAGAATCCG+AGG - chr4_2:49326563-49326582 Msa0604140:intron 45.0%
! AAGGGGTCCTTCGATTTTCT+TGG - chr4_2:49326591-49326610 Msa0604140:intron 45.0%
AGAGAGTCAGTTTGTATGGC+TGG + chr4_2:49326675-49326694 None:intergenic 45.0%
TCGATGACAGTTCATCGTGA+TGG - chr4_2:49326835-49326854 Msa0604140:intron 45.0%
GCTTTATCTGAAGAGCCTCT+AGG - chr4_2:49327319-49327338 Msa0604140:CDS 45.0%
! CAGGGAAGGTGTGAATGTAA+AGG - chr4_2:49327441-49327460 Msa0604140:CDS 45.0%
TGAAGCCAGATTCCCATTCA+TGG + chr4_2:49327495-49327514 None:intergenic 45.0%
! ACCAATGTGCCGAGAGTTTT+GGG + chr4_2:49327570-49327589 None:intergenic 45.0%
! AACCAATGTGCCGAGAGTTT+TGG + chr4_2:49327571-49327590 None:intergenic 45.0%
!!! ATATTTTAGAAATAATATTT+TGG + chr4_2:49326949-49326968 None:intergenic 5.0%
!!! TTTAGTTTTAATTTTTTTAA+TGG - chr4_2:49327757-49327776 Msa0604140:intron 5.0%
!!! ATATTTTAGAAATAATATTT+TGG + chr4_2:49326949-49326968 None:intergenic 5.0%
!!! TTTAGTTTTAATTTTTTTAA+TGG - chr4_2:49327757-49327776 Msa0604140:intron 5.0%
GATGTTGATGCTGCACAACG+AGG - chr4_2:49326144-49326163 Msa0604140:three_prime_UTR 50.0%
GCCTCGACTTCATGTTTGGA+TGG - chr4_2:49326166-49326185 Msa0604140:three_prime_UTR 50.0%
TGCGATCTTTGGTTGGAAGC+CGG - chr4_2:49326532-49326551 Msa0604140:intron 50.0%
GAAGGACCCCTTAAGATCCT+CGG + chr4_2:49326583-49326602 None:intergenic 50.0%
AGGTGCATCAGCAGCATAAG+AGG + chr4_2:49326634-49326653 None:intergenic 50.0%
! GTCAGTTTGTATGGCTGGTC+TGG + chr4_2:49326670-49326689 None:intergenic 50.0%
! TCTGGCTTCAGCTTGCGATT+TGG - chr4_2:49327505-49327524 Msa0604140:intron 50.0%
! GCGATTTGGACTCGTCTTTG+TGG - chr4_2:49327519-49327538 Msa0604140:intron 50.0%
ACCCAAAACTCTCGGCACAT+TGG - chr4_2:49327566-49327585 Msa0604140:intron 50.0%
GATGTTGATGCTGCACAACG+AGG - chr4_2:49326144-49326163 Msa0604140:three_prime_UTR 50.0%
GCCTCGACTTCATGTTTGGA+TGG - chr4_2:49326166-49326185 Msa0604140:three_prime_UTR 50.0%
TGCGATCTTTGGTTGGAAGC+CGG - chr4_2:49326532-49326551 Msa0604140:intron 50.0%
GAAGGACCCCTTAAGATCCT+CGG + chr4_2:49326583-49326602 None:intergenic 50.0%
AGGTGCATCAGCAGCATAAG+AGG + chr4_2:49326634-49326653 None:intergenic 50.0%
! GTCAGTTTGTATGGCTGGTC+TGG + chr4_2:49326670-49326689 None:intergenic 50.0%
! TCTGGCTTCAGCTTGCGATT+TGG - chr4_2:49327505-49327524 Msa0604140:intron 50.0%
! GCGATTTGGACTCGTCTTTG+TGG - chr4_2:49327519-49327538 Msa0604140:intron 50.0%
ACCCAAAACTCTCGGCACAT+TGG - chr4_2:49327566-49327585 Msa0604140:intron 50.0%
TCTGCTTTCGCTTGAGAGGC+CGG + chr4_2:49326126-49326145 None:intergenic 55.0%
CGAGGCCTCGACTTCATGTT+TGG - chr4_2:49326162-49326181 Msa0604140:three_prime_UTR 55.0%
TCTGCTTTCGCTTGAGAGGC+CGG + chr4_2:49326126-49326145 None:intergenic 55.0%
CGAGGCCTCGACTTCATGTT+TGG - chr4_2:49326162-49326181 Msa0604140:three_prime_UTR 55.0%
GGTCTGGCATCGCGTAAGTG+AGG + chr4_2:49326654-49326673 None:intergenic 60.0%
CATCGTGATGGCAAGCCCCT+TGG - chr4_2:49326847-49326866 Msa0604140:intron 60.0%
TGGCAAGCCCCTTGGTCCAA+TGG - chr4_2:49326855-49326874 Msa0604140:intron 60.0%
GGTCTGGCATCGCGTAAGTG+AGG + chr4_2:49326654-49326673 None:intergenic 60.0%
CATCGTGATGGCAAGCCCCT+TGG - chr4_2:49326847-49326866 Msa0604140:intron 60.0%
TGGCAAGCCCCTTGGTCCAA+TGG - chr4_2:49326855-49326874 Msa0604140:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 49326066 49327921 49326066 ID=Msa0604140;Name=Msa0604140
chr4_2 mRNA 49326066 49327921 49326066 ID=Msa0604140-mRNA-1;Parent=Msa0604140;Name=Msa0604140-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|1|0.83|1|1|1|6|285|258
chr4_2 exon 49326066 49326543 49326066 ID=Msa0604140-mRNA-1:exon:11449;Parent=Msa0604140-mRNA-1
chr4_2 exon 49326678 49326786 49326678 ID=Msa0604140-mRNA-1:exon:11448;Parent=Msa0604140-mRNA-1
chr4_2 exon 49326885 49326987 49326885 ID=Msa0604140-mRNA-1:exon:11447;Parent=Msa0604140-mRNA-1
chr4_2 exon 49327111 49327142 49327111 ID=Msa0604140-mRNA-1:exon:11446;Parent=Msa0604140-mRNA-1
chr4_2 exon 49327279 49327496 49327279 ID=Msa0604140-mRNA-1:exon:11445;Parent=Msa0604140-mRNA-1
chr4_2 exon 49327800 49327921 49327800 ID=Msa0604140-mRNA-1:exon:11444;Parent=Msa0604140-mRNA-1
chr4_2 CDS 49327800 49327921 49327800 ID=Msa0604140-mRNA-1:cds;Parent=Msa0604140-mRNA-1
chr4_2 CDS 49327279 49327496 49327279 ID=Msa0604140-mRNA-1:cds;Parent=Msa0604140-mRNA-1
chr4_2 CDS 49327111 49327142 49327111 ID=Msa0604140-mRNA-1:cds;Parent=Msa0604140-mRNA-1
chr4_2 CDS 49326885 49326987 49326885 ID=Msa0604140-mRNA-1:cds;Parent=Msa0604140-mRNA-1
chr4_2 CDS 49326678 49326786 49326678 ID=Msa0604140-mRNA-1:cds;Parent=Msa0604140-mRNA-1
chr4_2 CDS 49326351 49326543 49326351 ID=Msa0604140-mRNA-1:cds;Parent=Msa0604140-mRNA-1
chr4_2 three_prime_UTR 49326066 49326350 49326066 ID=Msa0604140-mRNA-1:three_prime_utr;Parent=Msa0604140-mRNA-1
Gene Sequence

>Msa0604140

ATGCAGGCATCTCAATATGGTATAATAGGGATTACCTTACTCTCTCATTGGTATGAGCCGGCCTCTCAAGCGAAAGCAGATGTTGATGCTGCACAACGAGGCCTCGACTTCATGTTTGGATGGTATATGGATCCAATCACAAAAGGAAACTATCCAAAAAGCATGCGATCTTTGGTTGGAAGCCGGCTACCAAAGTTCTCCAAAGAAGAATCCGAGGATCTTAAGGGGTCCTTCGATTTTCTTGGCCTAAACTATTACTCTTCCTCTTATGCTGCTGATGCACCTCACTTACGCGATGCCAGACCAGCCATACAAACTGACTCTCTTATCAATGCTACATTTCATCGTGATGGCAAGCCCCTTGGTCCAATGTCTGCTTCAAGTTGGTTATGCATTTATCCGAGAGGATTAGGAAACCTGTTGCTTCACGTCAAGAATAAGTACGACAACCCCATAATATACATTACTGAAAATGGTCGTGATGAGTTCAACGATCCAAAACTGTCACTCGAAGAATCCCTTTTAGATACTTATAGAATCGATTACTTTTATCGTCATCTTTATTATGTTCAAGCTGCAATCAGGGAAGGTGTGAATGTAAAGGGATATTTTGCATGGTCATTGTTGGATAACCATGAATGGGAATCTGGCTTCAGCTTGCGATTTGGACTCGTCTTTGTGGATTATAATGACGACTTGAAAAGACACCCAAAACTCTCGGCACATTGGTTCAAGAATTTCCTCAAAAAATCTTGCCAAGAAAAGTGTTCTGTTTAA
Protein sequence

>Msa0604140

MQASQYGIIGITLLSHWYEPASQAKADVDAAQRGLDFMFGWYMDPITKGNYPKSMRSLVGSRLPKFSKEESEDLKGSFDFLGLNYYSSSYAADAPHLRDARPAIQTDSLINATFHRDGKPLGPMSASSWLCIYPRGLGNLLLHVKNKYDNPIIYITENGRDEFNDPKLSLEESLLDTYRIDYFYRHLYYVQAAIREGVNVKGYFAWSLLDNHEWESGFSLRFGLVFVDYNDDLKRHPKLSAHWFKNFLKKSCQEKCSV*