AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0636770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0636770 MtrunA17_Chr4g0033191 98.710 310 4 0 1 310 218 527 0.0 641
Msa0636770 MtrunA17_Chr4g0033201 87.789 303 37 0 1 303 211 513 0.0 556
Msa0636770 MtrunA17_Chr4g0033271 77.152 302 69 0 2 303 211 512 7.13e-178 501
Msa0636770 MtrunA17_Chr4g0033311 65.461 304 105 0 2 305 215 518 4.61e-151 434
Msa0636770 MtrunA17_Chr2g0329321 66.225 302 102 0 1 302 187 488 3.30e-150 430
Msa0636770 MtrunA17_Chr3g0088441 64.145 304 109 0 2 305 214 517 9.03e-150 431
Msa0636770 MtrunA17_Chr2g0329191 64.667 300 106 0 3 302 210 509 4.96e-148 426
Msa0636770 MtrunA17_Chr2g0329201 63.907 302 109 0 1 302 206 507 2.90e-147 423
Msa0636770 MtrunA17_Chr4g0033331 64.548 299 106 0 2 300 215 513 2.77e-145 419
Msa0636770 MtrunA17_Chr4g0033401 64.214 299 107 0 2 300 210 508 3.64e-145 419
Msa0636770 MtrunA17_Chr6g0482131 61.386 303 117 0 2 304 212 514 4.12e-143 413
Msa0636770 MtrunA17_Chr4g0033321 63.211 299 110 0 2 300 209 507 6.79e-143 412
Msa0636770 MtrunA17_Chr6g0482071 62.667 300 112 0 3 302 214 513 7.68e-142 410
Msa0636770 MtrunA17_Chr6g0482081 64.452 301 106 1 2 301 212 512 1.28e-136 397
Msa0636770 MtrunA17_Chr4g0033341 57.947 302 123 2 3 303 246 544 5.39e-129 378
Msa0636770 MtrunA17_Chr4g0033261 60.751 293 112 2 13 302 201 493 1.04e-128 375
Msa0636770 MtrunA17_Chr5g0430451 61.489 309 110 1 3 302 190 498 1.45e-128 375
Msa0636770 MtrunA17_Chr4g0033231 59.727 293 115 2 13 302 201 493 6.37e-127 371
Msa0636770 MtrunA17_Chr3g0087201 52.318 302 139 2 1 302 48 344 1.03e-113 332
Msa0636770 MtrunA17_Chr2g0301231 54.027 298 127 4 13 302 97 392 5.14e-109 322
Msa0636770 MtrunA17_Chr4g0006111 52.117 307 125 6 13 302 224 525 1.82e-105 317
Msa0636770 MtrunA17_Chr4g0010501 52.667 300 136 3 3 302 201 494 1.30e-104 314
Msa0636770 MtrunA17_Chr4g0006131 53.846 286 119 6 27 301 217 500 2.11e-99 301
Msa0636770 MtrunA17_Chr3g0087261 47.855 303 154 3 1 302 210 509 2.14e-99 301
Msa0636770 MtrunA17_Chr4g0043091 49.505 303 147 3 3 301 202 502 1.41e-96 294
Msa0636770 MtrunA17_Chr6g0482951 47.508 301 152 4 3 302 217 512 2.66e-90 278
Msa0636770 MtrunA17_Chr6g0482941 47.176 301 153 4 3 302 217 512 1.19e-89 276
Msa0636770 MtrunA17_Chr3g0087271 47.351 302 157 2 1 302 211 510 5.10e-89 275
Msa0636770 MtrunA17_Chr4g0074561 44.850 301 162 4 3 300 211 510 2.97e-85 265
Msa0636770 MtrunA17_Chr4g0042171 44.728 313 168 3 1 309 196 507 4.86e-85 265
Msa0636770 MtrunA17_Chr3g0090111 42.718 309 161 4 1 307 192 486 2.11e-82 257
Msa0636770 MtrunA17_Chr4g0074551 44.118 306 167 4 3 306 225 528 4.53e-82 258
Msa0636770 MtrunA17_Chr2g0288071 44.444 306 166 4 3 306 243 546 9.91e-82 257
Msa0636770 MtrunA17_Chr3g0090131 42.581 310 161 4 1 307 194 489 2.98e-79 249
Msa0636770 MtrunA17_Chr2g0317841 40.584 308 174 4 3 306 207 509 1.37e-74 238
Msa0636770 MtrunA17_Chr7g0234091 44.755 286 151 3 22 306 258 537 2.47e-74 237
Msa0636770 MtrunA17_Chr2g0317821 40.584 308 174 4 3 306 207 509 3.35e-74 237
Msa0636770 MtrunA17_Chr7g0234111 44.444 288 153 3 14 300 250 531 1.24e-71 230
Msa0636770 MtrunA17_Chr7g0234131 42.349 281 156 2 21 300 257 532 5.13e-71 229
Msa0636770 MtrunA17_Chr2g0288021 38.411 302 182 3 3 302 210 509 1.28e-70 227
Msa0636770 MtrunA17_Chr7g0242681 41.368 307 154 7 3 301 212 500 1.38e-68 222
Msa0636770 MtrunA17_Chr7g0242691 39.677 310 162 5 1 302 203 495 2.27e-68 221
Msa0636770 MtrunA17_Chr4g0006971 36.977 311 181 5 1 308 199 497 6.41e-62 204
Msa0636770 MtrunA17_Chr5g0428831 36.808 307 178 6 1 303 197 491 1.14e-58 196
Msa0636770 MtrunA17_Chr1g0195611 35.831 307 180 5 1 303 197 490 1.15e-54 185
Msa0636770 MtrunA17_Chr7g0230651 43.805 226 117 4 22 247 161 376 9.32e-51 172
Msa0636770 MtrunA17_Chr5g0418871 50.355 141 70 0 3 143 157 297 1.78e-44 154
Msa0636770 MtrunA17_Chr1g0195641 37.383 214 124 4 1 211 197 403 6.12e-36 133
Msa0636770 MtrunA17_Chr7g0236731 49.219 128 65 0 21 148 129 256 2.68e-35 129
Msa0636770 MtrunA17_Chr5g0418861 58.427 89 36 1 213 300 2 90 5.86e-29 106
Msa0636770 MtrunA17_Chr8g0352881 45.000 100 55 0 52 151 57 156 8.75e-25 97.8
Msa0636770 MtrunA17_Chr7g0227591 54.386 57 26 0 248 304 13 69 7.92e-15 68.2
Msa0636770 MtrunA17_Chr4g0068871 30.556 180 89 5 124 300 386 532 1.70e-13 70.9
Msa0636770 MtrunA17_Chr7g0227561 45.833 72 39 0 22 93 209 280 2.36e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0636770 AT2G44480.5 48.173 301 155 1 3 303 6 305 1.17e-104 308
Msa0636770 AT2G44480.2 48.173 301 155 1 3 303 110 409 5.32e-103 308
Msa0636770 AT2G44450.2 49.007 302 147 3 2 302 56 351 8.33e-103 305
Msa0636770 AT2G44480.1 48.173 301 155 1 3 303 212 511 1.29e-101 308
Msa0636770 AT2G44480.3 48.173 301 155 1 3 303 243 542 2.96e-101 308
Msa0636770 AT2G44450.1 49.169 301 146 3 3 302 208 502 1.03e-100 305
Msa0636770 AT3G60130.2 51.333 300 140 3 3 301 155 449 2.09e-100 303
Msa0636770 AT5G44640.1 49.338 302 147 3 2 302 207 503 2.54e-100 304
Msa0636770 AT3G60130.1 51.333 300 140 3 3 301 207 501 2.14e-99 302
Msa0636770 AT5G42260.1 50.000 296 142 3 2 296 207 497 1.19e-98 300
Msa0636770 AT3G18070.7 45.545 303 156 6 3 302 13 309 1.26e-92 278
Msa0636770 AT3G60130.3 49.333 300 135 4 3 301 155 438 1.59e-91 280
Msa0636770 AT5G24550.1 46.906 307 159 4 1 303 206 512 3.80e-91 281
Msa0636770 AT3G18070.2 45.545 303 156 6 3 302 125 421 4.37e-91 278
Msa0636770 AT1G26560.1 45.603 307 162 4 1 303 204 509 1.73e-90 279
Msa0636770 AT3G18070.3 45.545 303 156 6 3 302 196 492 1.99e-90 278
Msa0636770 AT3G18070.1 45.545 303 156 6 3 302 202 498 4.15e-90 278
Msa0636770 AT3G18080.1 47.195 303 153 5 3 303 213 510 1.49e-89 276
Msa0636770 AT2G25630.1 47.157 299 135 4 3 300 207 483 3.75e-87 270
Msa0636770 AT5G54570.2 45.066 304 162 3 1 300 106 408 9.28e-87 267
Msa0636770 AT5G54570.1 45.066 304 162 3 1 300 203 505 6.59e-86 268
Msa0636770 AT3G60140.1 43.279 305 170 3 3 304 202 506 9.76e-86 268
Msa0636770 AT1G51470.1 44.408 304 158 5 1 302 217 511 1.00e-85 266
Msa0636770 AT5G24540.1 46.906 307 159 4 1 303 206 512 1.16e-83 262
Msa0636770 AT2G44460.2 47.078 308 157 5 3 306 59 364 1.46e-83 259
Msa0636770 AT2G44470.3 43.322 307 163 4 3 302 205 507 2.21e-83 263
Msa0636770 AT1G47600.1 43.791 306 153 6 3 302 219 511 5.05e-83 259
Msa0636770 AT3G60120.1 43.831 308 163 6 1 302 188 491 5.47e-83 260
Msa0636770 AT5G36890.1 43.831 308 162 2 1 307 189 486 2.85e-82 257
Msa0636770 AT5G36890.2 43.831 308 162 2 1 307 189 486 3.07e-82 257
Msa0636770 AT1G61820.3 44.262 305 165 4 3 304 67 369 3.74e-82 253
Msa0636770 AT2G44460.1 46.795 312 160 5 3 310 205 514 5.46e-82 259
Msa0636770 AT1G47600.2 43.464 306 153 6 3 302 219 510 6.14e-82 257
Msa0636770 AT5G25980.2 45.367 313 155 9 3 307 225 529 1.38e-81 257
Msa0636770 AT1G61820.1 44.262 305 165 4 3 304 206 508 2.71e-80 253
Msa0636770 AT5G26000.1 43.354 316 156 8 3 306 213 517 1.64e-78 249
Msa0636770 AT2G44490.1 41.853 313 176 5 3 310 191 502 8.25e-78 247
Msa0636770 AT1G61810.5 41.234 308 176 4 3 307 109 414 1.29e-76 240
Msa0636770 AT2G32860.2 40.645 310 180 4 3 308 271 580 3.31e-76 244
Msa0636770 AT1G61810.1 41.234 308 176 4 3 307 209 514 1.02e-75 241
Msa0636770 AT4G21760.2 40.333 300 170 4 3 300 229 521 1.91e-75 241
Msa0636770 AT2G32860.1 40.645 310 179 5 3 308 271 579 7.24e-75 241
Msa0636770 AT3G03640.1 40.000 305 177 4 3 302 211 514 3.70e-71 229
Msa0636770 AT1G02850.2 41.158 311 161 6 1 305 196 490 5.07e-71 228
Msa0636770 AT4G27830.2 39.610 308 169 5 1 304 106 400 2.96e-69 221
Msa0636770 AT4G21760.1 39.333 300 163 5 3 300 229 511 7.50e-69 223
Msa0636770 AT1G61810.3 41.667 288 163 4 3 287 209 494 8.66e-69 223
Msa0636770 AT4G27830.1 39.610 308 169 5 1 304 194 488 2.95e-68 221
Msa0636770 AT3G09260.1 40.523 306 178 4 3 305 211 515 1.89e-67 219
Msa0636770 AT1G02850.5 38.855 332 158 7 1 303 196 511 2.47e-66 216
Msa0636770 AT5G28510.1 39.172 314 176 6 3 305 215 524 2.54e-66 217
Msa0636770 AT1G75940.1 40.196 306 174 6 3 300 213 517 5.01e-66 216
Msa0636770 AT3G21370.1 40.193 311 169 8 2 301 208 512 5.49e-66 216
Msa0636770 AT4G22100.1 40.717 307 163 7 1 301 190 483 1.12e-65 214
Msa0636770 AT1G66280.1 40.909 308 173 6 3 305 212 515 3.78e-65 213
Msa0636770 AT1G02850.4 38.739 333 158 8 1 303 196 512 1.56e-64 212
Msa0636770 AT1G66270.2 39.088 307 180 5 3 305 210 513 1.90e-63 209
Msa0636770 AT1G66270.1 39.088 307 180 5 3 305 212 515 2.11e-63 209
Msa0636770 AT1G45191.4 39.073 302 169 6 1 301 197 484 3.89e-63 208
Msa0636770 AT5G54570.3 43.600 250 137 3 1 247 203 451 6.71e-63 206
Msa0636770 AT5G25980.3 45.418 251 123 7 3 247 225 467 1.36e-62 205
Msa0636770 AT5G25980.1 45.418 251 123 7 3 247 225 467 1.36e-62 205
Msa0636770 AT1G52400.3 39.542 306 174 8 3 301 215 516 4.83e-62 206
Msa0636770 AT1G52400.1 39.542 306 174 8 3 301 215 516 4.83e-62 206
Msa0636770 AT4G27820.2 38.961 308 172 5 1 304 106 401 1.15e-61 202
Msa0636770 AT4G27820.3 38.961 308 172 5 1 304 106 401 1.15e-61 202
Msa0636770 AT1G02850.1 39.228 311 140 7 1 305 196 463 1.57e-61 202
Msa0636770 AT1G45191.2 38.361 305 173 6 1 301 197 490 7.66e-61 202
Msa0636770 AT4G27820.1 38.961 308 172 5 1 304 191 486 8.71e-61 202
Msa0636770 AT1G60090.2 37.582 306 172 7 1 301 192 483 1.54e-60 201
Msa0636770 AT2G44470.1 41.600 250 136 3 3 246 205 450 2.90e-60 199
Msa0636770 AT1G45191.6 38.312 308 174 5 1 301 197 495 3.12e-60 201
Msa0636770 AT1G45191.1 38.312 308 174 5 1 301 209 507 4.02e-60 200
Msa0636770 AT3G18070.6 43.128 211 116 3 3 211 13 221 2.65e-59 190
Msa0636770 AT5G26000.2 42.353 255 126 7 3 247 213 456 3.12e-59 196
Msa0636770 AT3G62750.6 38.328 287 163 4 21 304 117 392 7.57e-59 194
Msa0636770 AT3G62750.5 38.328 287 163 4 21 304 117 392 7.57e-59 194
Msa0636770 AT3G62750.1 38.328 287 163 4 21 304 202 477 7.95e-58 194
Msa0636770 AT3G18070.5 43.128 211 116 3 3 211 125 333 9.64e-58 189
Msa0636770 AT3G62750.2 38.328 287 163 4 21 304 228 503 1.09e-57 194
Msa0636770 AT5G48375.1 36.426 291 142 4 13 293 182 439 1.67e-57 191
Msa0636770 AT1G60090.1 36.570 309 178 8 1 301 192 490 4.06e-57 192
Msa0636770 AT5G24540.2 43.373 249 138 3 1 246 206 454 1.83e-56 189
Msa0636770 AT3G60140.2 40.465 215 126 2 3 215 202 416 1.46e-53 181
Msa0636770 AT3G62740.1 33.645 321 185 6 4 309 190 497 1.34e-52 180
Msa0636770 AT1G61810.4 38.679 212 126 3 3 211 209 419 2.02e-44 157
Msa0636770 AT3G18070.4 48.951 143 72 1 3 145 202 343 8.50e-44 154
Msa0636770 AT2G44470.2 41.954 174 95 2 3 170 205 378 2.69e-41 148
Msa0636770 AT2G44480.4 51.493 134 63 2 3 136 243 374 2.75e-41 147
Msa0636770 AT5G16580.1 37.391 230 134 6 29 257 79 299 3.43e-41 145
Msa0636770 AT1G02850.3 36.820 239 113 4 1 211 196 424 4.05e-41 148
Msa0636770 AT3G62750.4 37.662 231 131 3 21 249 228 447 1.59e-40 147
Msa0636770 AT1G52400.2 37.200 250 147 7 3 246 215 460 6.09e-39 143
Msa0636770 AT3G62740.2 33.603 247 147 4 4 246 190 423 6.69e-37 137
Msa0636770 AT1G60270.2 45.652 138 74 1 1 138 106 242 7.51e-37 134
Msa0636770 AT1G60270.1 45.652 138 74 1 1 138 193 329 7.71e-36 133
Msa0636770 AT1G45191.5 41.401 157 87 2 1 157 197 348 1.27e-34 130
Msa0636770 AT1G45191.3 41.401 157 87 2 1 157 197 348 1.40e-34 130
Msa0636770 AT1G51490.1 41.011 178 90 5 1 174 191 357 3.42e-33 126
Msa0636770 AT3G62750.7 44.094 127 71 0 21 147 202 328 5.70e-32 122
Msa0636770 AT3G62750.8 44.094 127 71 0 21 147 202 328 5.70e-32 122
Msa0636770 AT3G62750.3 44.094 127 71 0 21 147 228 354 9.97e-32 123
Msa0636770 AT1G61810.2 48.387 93 47 1 3 95 209 300 1.45e-22 95.9
Msa0636770 AT3G06510.1 30.857 175 85 6 130 301 369 510 2.12e-13 71.2
Msa0636770 AT3G06510.2 29.897 194 96 6 130 301 369 544 4.02e-13 70.1

Find 103 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTTTGCTACAAGGAATT+TGG 0.209271 4_3:-27751360 Msa0636770:five_prime_UTR
GCATCTCAATATGGTATAAT+AGG 0.209400 4_3:-27750965 Msa0636770:CDS
CGATTCTATAAGTATCTAAA+AGG 0.249841 4_3:+27749794 None:intergenic
ATAATATACATTACTGAAAA+TGG 0.254622 4_3:-27749957 Msa0636770:intron
AAAACAGCAGACCTGATATT+TGG 0.263998 4_3:+27751137 None:intergenic
TACTATATCACAAATGTATA+AGG 0.276039 4_3:+27751792 None:intergenic
TCCTTCTGCAAATAGTTAAT+AGG 0.299271 4_3:+27751755 None:intergenic
TATAGCTATTCTCCATAAAA+AGG 0.308127 4_3:+27749129 None:intergenic
AAGATCCTCGGATTCTTCTT+TGG 0.311879 4_3:+27750470 None:intergenic
AATTGCACAGGAGGTGATTC+GGG 0.327589 4_3:-27751228 Msa0636770:CDS
AACCAATGTGCCGAGAGTTT+TGG 0.337227 4_3:+27749470 None:intergenic
TGCATTTATCCGAGAGGATT+AGG 0.340389 4_3:-27750020 Msa0636770:CDS
CGAGGCCTCGACTTCATGTT+TGG 0.348528 4_3:-27750875 Msa0636770:CDS
AGAAGAATCCGAGGATCTTA+AGG 0.358352 4_3:-27750466 Msa0636770:CDS
GATTCTTCGAGTGACAGTTT+TGG 0.360269 4_3:+27749817 None:intergenic
GGACGTTCCTCAAGCCTTAG+AGG 0.360927 4_3:-27751547 Msa0636770:five_prime_UTR
TCTGGCTTCAGCTTGCGATT+TGG 0.362792 4_3:-27749533 Msa0636770:CDS
GCTACAAGGAATTTGGTGAT+AGG 0.371977 4_3:-27751353 Msa0636770:five_prime_UTR
GATAAGAGAGTCAGTTTGTA+TGG 0.374381 4_3:+27750362 None:intergenic
TGAAGCCAGATTCCCATTCA+TGG 0.380755 4_3:+27749546 None:intergenic
CACCGGGTCGATGTTCTGAT+TGG 0.383994 4_3:-27751260 Msa0636770:CDS
AGGATTAGAAAATAGTGATA+TGG 0.390437 4_3:-27749393 Msa0636770:three_prime_UTR
GAATTGCACAGGAGGTGATT+CGG 0.391598 4_3:-27751229 Msa0636770:CDS
GTCAGTTTGTATGGCTGGTC+TGG 0.402360 4_3:+27750371 None:intergenic
CAACCTCATCAACGAACTAT+TGG 0.405447 4_3:-27751688 Msa0636770:five_prime_UTR
GATAACCATGAATGGGAATC+TGG 0.405714 4_3:-27749551 Msa0636770:CDS
CATCTCAATATGGTATAATA+GGG 0.411825 4_3:-27750964 Msa0636770:CDS
AGGTGCATCAGCAGCATAAG+AGG 0.414938 4_3:+27750407 None:intergenic
TGTAGTAGTTTATTCCTTCA+CGG 0.418155 4_3:+27751712 None:intergenic
TATTCTTGACGTAAAGCAAC+AGG 0.430967 4_3:+27749994 None:intergenic
AAGAGGAAGAGTAATAGTTT+AGG 0.433722 4_3:+27750424 None:intergenic
TGTTCTGTTTAAATGAACTT+AGG 0.434940 4_3:-27749413 Msa0636770:exon
AGGGAAGGTGTGAATGTAAA+GGG 0.435489 4_3:-27749596 Msa0636770:CDS
GCGATTTGGACTCGTCTTTG+TGG 0.435971 4_3:-27749519 Msa0636770:CDS
GAAATGCAGGCATCTCAATA+TGG 0.438902 4_3:-27750974 Msa0636770:intron
ATTATGTTCAAGCTGCAATC+AGG 0.440754 4_3:-27749750 Msa0636770:intron
TTTGCAGAAGGAAAGCTTAG+TGG 0.446993 4_3:-27751744 Msa0636770:five_prime_UTR
ACTATACAAGACCAAATATC+AGG 0.449280 4_3:-27751148 Msa0636770:intron
ATCAACGAACTATTGGCTAA+TGG 0.455297 4_3:-27751681 Msa0636770:intron
GGATTACCTTACTCTCTCAT+TGG 0.457583 4_3:-27750943 Msa0636770:CDS
CTTTGGAGAACTTTGGTAGC+CGG 0.461441 4_3:+27750487 None:intergenic
GAAGAATCCGAGGATCTTAA+GGG 0.463005 4_3:-27750465 Msa0636770:CDS
AGAGAGTCAGTTTGTATGGC+TGG 0.463847 4_3:+27750366 None:intergenic
CTACAAGGAATTTGGTGATA+GGG 0.466831 4_3:-27751352 Msa0636770:five_prime_UTR
ACCGTCATACTCATCCTCTA+AGG 0.470920 4_3:+27751533 None:intergenic
GATTCTTCTTTGGAGAACTT+TGG 0.475194 4_3:+27750480 None:intergenic
TGCGATCTTTGGTTGGAAGC+CGG 0.484554 4_3:-27750506 Msa0636770:CDS
AGCATGAATGCTTATGCATA+TGG 0.485187 4_3:-27751291 Msa0636770:CDS
ACTATATCACAAATGTATAA+GGG 0.485948 4_3:+27751793 None:intergenic
CATCGTGATGGCAAGCCCCT+TGG 0.493086 4_3:-27750191 Msa0636770:CDS
CAGGGAAGGTGTGAATGTAA+AGG 0.498317 4_3:-27749597 Msa0636770:CDS
CTCATACCAATGAGAGAGTA+AGG 0.499326 4_3:+27750937 None:intergenic
CAGCAGCATGAGCAAGAAGT+TGG 0.509755 4_3:+27751178 None:intergenic
TATATGGATCCAATCACAAA+AGG 0.510867 4_3:-27750546 Msa0636770:CDS
TGGTAGTGCGCAGTCAAATA+CGG 0.513115 4_3:+27751198 None:intergenic
CTACGCTGACCTTTGCTACA+AGG 0.513290 4_3:-27751367 Msa0636770:five_prime_UTR
CATTGTTGGATAACCATGAA+TGG 0.514197 4_3:-27749559 Msa0636770:CDS
TCCTATTAACTATTTGCAGA+AGG 0.516855 4_3:-27751756 Msa0636770:five_prime_UTR
CACCAAATTCCTTGTAGCAA+AGG 0.520911 4_3:+27751358 None:intergenic
ATTGTTGGATAACCATGAAT+GGG 0.522990 4_3:-27749558 Msa0636770:CDS
TCTGCTTTCGCTTGAGAGGC+CGG 0.524404 4_3:+27750914 None:intergenic
AACATCTGCTTTCGCTTGAG+AGG 0.524538 4_3:+27750910 None:intergenic
TGGTTAAATCTGAATTGCAC+AGG 0.528273 4_3:-27751240 Msa0636770:CDS
AACAGGTTTCCTAATCCTCT+CGG 0.530574 4_3:+27750011 None:intergenic
TTGGTGATAGGGTGAAACAT+TGG 0.532663 4_3:-27751341 Msa0636770:five_prime_UTR
ACTCTCTCATTGGTATGAGC+CGG 0.532738 4_3:-27750933 Msa0636770:CDS
TGGCAAGCCCCTTGGTCCAA+TGG 0.533454 4_3:-27750183 Msa0636770:intron
TGCATATGGAAAGTTTGCAC+CGG 0.533544 4_3:-27751277 Msa0636770:CDS
GATTCTATAAGTATCTAAAA+GGG 0.541771 4_3:+27749795 None:intergenic
AATATATACCATTGGACCAA+GGG 0.544956 4_3:+27750175 None:intergenic
AAAAGCATGCGATCTTTGGT+TGG 0.548161 4_3:-27750513 Msa0636770:CDS
TCGATGACAGTTCATCGTGA+TGG 0.548253 4_3:-27750203 Msa0636770:intron
GCCTCGACTTCATGTTTGGA+TGG 0.549073 4_3:-27750871 Msa0636770:intron
TAGCCAATAGTTCGTTGATG+AGG 0.565702 4_3:+27751685 None:intergenic
TTTCAGTAATGTATATTATG+GGG 0.565878 4_3:+27749961 None:intergenic
ATATGCAGTCTGCTTCAAGT+TGG 0.568943 4_3:-27750046 Msa0636770:intron
GCATTCATGCTCACACTCCA+TGG 0.576199 4_3:+27751303 None:intergenic
CAATGGAAAAGAGTCACATA+TGG 0.580739 4_3:+27751570 None:intergenic
GAAAAGACACCCAAAACTCT+CGG 0.586397 4_3:-27749480 Msa0636770:CDS
GCATATGGAAAGTTTGCACC+GGG 0.592559 4_3:-27751276 Msa0636770:CDS
TACTCATCCTCTAAGGCTTG+AGG 0.594134 4_3:+27751540 None:intergenic
AAATATATACCATTGGACCA+AGG 0.598574 4_3:+27750174 None:intergenic
ACCCAAAACTCTCGGCACAT+TGG 0.602316 4_3:-27749472 Msa0636770:CDS
GGATTACTTTGAATGAACCA+TGG 0.603853 4_3:-27751320 Msa0636770:five_prime_UTR
AGGCTTGAGGAACGTCCCAA+TGG 0.604842 4_3:+27751553 None:intergenic
GTTTAGGCCAAGAAAATCGA+AGG 0.606609 4_3:+27750440 None:intergenic
GAAGGACCCCTTAAGATCCT+CGG 0.611639 4_3:+27750458 None:intergenic
GGTGTCACTCACACAATCCG+AGG 0.616673 4_3:+27751501 None:intergenic
GGTCTGGCATCGCGTAAGTG+AGG 0.617392 4_3:+27750387 None:intergenic
GCCTTAGAGGATGAGTATGA+CGG 0.628770 4_3:-27751534 Msa0636770:five_prime_UTR
AACCAATCAGAACATCGACC+CGG 0.630892 4_3:+27751258 None:intergenic
GCAGAAGGAAAGCTTAGTGG+AGG 0.637778 4_3:-27751741 Msa0636770:five_prime_UTR
ATATATACCATTGGACCAAG+GGG 0.639799 4_3:+27750176 None:intergenic
AGTGGAGGTGTAAACCGTGA+AGG 0.641058 4_3:-27751726 Msa0636770:five_prime_UTR
ACCATCCAAACATGAAGTCG+AGG 0.641696 4_3:+27750870 None:intergenic
GTTCTCCAAAGAAGAATCCG+AGG 0.647399 4_3:-27750475 Msa0636770:CDS
TGGTTATGCATTTATCCGAG+AGG 0.653174 4_3:-27750026 Msa0636770:CDS
GTGTCACTCACACAATCCGA+GGG 0.662250 4_3:+27751502 None:intergenic
TTAAATCTGAATTGCACAGG+AGG 0.663041 4_3:-27751237 Msa0636770:CDS
AAGAATCCGAGGATCTTAAG+GGG 0.674534 4_3:-27750464 Msa0636770:CDS
ATATCACAAATGTATAAGGG+AGG 0.684648 4_3:+27751796 None:intergenic
ATTGCACAGGAGGTGATTCG+GGG 0.685472 4_3:-27751227 Msa0636770:CDS
GATGTTGATGCTGCACAACG+AGG 0.729333 4_3:-27750893 Msa0636770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCAATATATTATTCAAATT+CGG - chr4_3:27749824-27749843 Msa0636770:CDS 15.0%
!! AATGATAAAATATATACCAT+TGG + chr4_3:27750770-27750789 None:intergenic 15.0%
!!! TTTTCAGTAATGTATATTAT+GGG + chr4_3:27750977-27750996 None:intergenic 15.0%
!!! ATTTTCAGTAATGTATATTA+TGG + chr4_3:27750978-27750997 None:intergenic 15.0%
!! ATAATATACATTACTGAAAA+TGG - chr4_3:27750977-27750996 Msa0636770:intron 15.0%
!! AATAATAGGTAAATGTAAAA+AGG + chr4_3:27751302-27751321 None:intergenic 15.0%
!! AAAAAAAAATTGCCAATAAA+AGG - chr4_3:27751598-27751617 Msa0636770:intron 15.0%
!! ACTATATCACAAATGTATAA+GGG + chr4_3:27749144-27749163 None:intergenic 20.0%
!! TACTATATCACAAATGTATA+AGG + chr4_3:27749145-27749164 None:intergenic 20.0%
!! ATAATAATTGAGAATAATGC+AGG - chr4_3:27749334-27749353 Msa0636770:three_prime_UTR 20.0%
!! CTATTTATCTATGACTATTT+AGG - chr4_3:27749472-27749491 Msa0636770:CDS 20.0%
!!! GCATTTCTCAAAATTTTATT+TGG + chr4_3:27749947-27749966 None:intergenic 20.0%
!!! AATAAAATTTTGAGAAATGC+AGG - chr4_3:27749947-27749966 Msa0636770:intron 20.0%
!!! ATGTAAACTTCATTTGATTT+TGG - chr4_3:27750213-27750232 Msa0636770:intron 20.0%
!! TTTCAGTAATGTATATTATG+GGG + chr4_3:27750976-27750995 None:intergenic 20.0%
!! GATTCTATAAGTATCTAAAA+GGG + chr4_3:27751142-27751161 None:intergenic 20.0%
!!! TACTTATTTTCATATCCATG+TGG - chr4_3:27749298-27749317 Msa0636770:three_prime_UTR 25.0%
! AATAGCTCAAGATTGAAAAT+TGG + chr4_3:27749457-27749476 None:intergenic 25.0%
!!! GCAATTGTTATTTGAATTTC+AGG + chr4_3:27749866-27749885 None:intergenic 25.0%
! CATCTCAATATGGTATAATA+GGG - chr4_3:27749970-27749989 Msa0636770:CDS 25.0%
! ATGATATGATCATGATAATC+TGG - chr4_3:27750180-27750199 Msa0636770:intron 25.0%
! ATTACTTTACTTTGCACAAA+TGG + chr4_3:27750306-27750325 None:intergenic 25.0%
! TTTGTGCAAAGTAAAGTAAT+AGG - chr4_3:27750306-27750325 Msa0636770:intron 25.0%
! CGATTCTATAAGTATCTAAA+AGG + chr4_3:27751143-27751162 None:intergenic 25.0%
! TAGGTAAATGTAAAAAGGAA+GGG + chr4_3:27751297-27751316 None:intergenic 25.0%
! ATAGGTAAATGTAAAAAGGA+AGG + chr4_3:27751298-27751317 None:intergenic 25.0%
! TATGCATAAAGGTCAATAAT+AGG + chr4_3:27751316-27751335 None:intergenic 25.0%
!! TTTAAACAGAACACTTTTCT+TGG + chr4_3:27751514-27751533 None:intergenic 25.0%
! TGTTCTGTTTAAATGAACTT+AGG - chr4_3:27751521-27751540 Msa0636770:five_prime_UTR 25.0%
! AGGATTAGAAAATAGTGATA+TGG - chr4_3:27751541-27751560 Msa0636770:five_prime_UTR 25.0%
!!! CTTTTCTAGAAACCTTTTAT+TGG + chr4_3:27751613-27751632 None:intergenic 25.0%
!! CTATTTGTGTAACCTTTTTA+TGG - chr4_3:27751793-27751812 Msa0636770:five_prime_UTR 25.0%
! TATAGCTATTCTCCATAAAA+AGG + chr4_3:27751808-27751827 None:intergenic 25.0%
ATATCACAAATGTATAAGGG+AGG + chr4_3:27749141-27749160 None:intergenic 30.0%
TCCTATTAACTATTTGCAGA+AGG - chr4_3:27749178-27749197 Msa0636770:three_prime_UTR 30.0%
TCCTTCTGCAAATAGTTAAT+AGG + chr4_3:27749182-27749201 None:intergenic 30.0%
TGTAGTAGTTTATTCCTTCA+CGG + chr4_3:27749225-27749244 None:intergenic 30.0%
ATTTATGATTGACAACCACA+TGG + chr4_3:27749316-27749335 None:intergenic 30.0%
! ATATGTGACTCTTTTCCATT+GGG - chr4_3:27749366-27749385 Msa0636770:three_prime_UTR 30.0%
! ATCTTGCAGAGATGATTTTA+GGG - chr4_3:27749543-27749562 Msa0636770:CDS 30.0%
ACTATACAAGACCAAATATC+AGG - chr4_3:27749786-27749805 Msa0636770:CDS 30.0%
GCATCTCAATATGGTATAAT+AGG - chr4_3:27749969-27749988 Msa0636770:CDS 30.0%
! TGCATTTTGCATTTTTCTGT+AGG - chr4_3:27750365-27750384 Msa0636770:CDS 30.0%
! TGCATTTTTCTGTAGGTATA+TGG - chr4_3:27750372-27750391 Msa0636770:CDS 30.0%
TATATGGATCCAATCACAAA+AGG - chr4_3:27750388-27750407 Msa0636770:CDS 30.0%
AAGAGGAAGAGTAATAGTTT+AGG + chr4_3:27750513-27750532 None:intergenic 30.0%
AATATATACCATTGGACCAA+GGG + chr4_3:27750762-27750781 None:intergenic 30.0%
AAATATATACCATTGGACCA+AGG + chr4_3:27750763-27750782 None:intergenic 30.0%
!! GCTTCTAGTTATTGATTTGT+AGG - chr4_3:27751237-27751256 Msa0636770:CDS 30.0%
TATTGACCTTTATGCATAAC+AGG - chr4_3:27751318-27751337 Msa0636770:five_prime_UTR 30.0%
ATTGACCTTTATGCATAACA+GGG - chr4_3:27751319-27751338 Msa0636770:five_prime_UTR 30.0%
! ATGTAAAGGGATATTTTGCA+TGG - chr4_3:27751351-27751370 Msa0636770:five_prime_UTR 30.0%
! ATATTTTGCATGGTCATTGT+TGG - chr4_3:27751361-27751380 Msa0636770:five_prime_UTR 30.0%
ATTGTTGGATAACCATGAAT+GGG - chr4_3:27751376-27751395 Msa0636770:five_prime_UTR 30.0%
!!! TTTCTTGGCAAGATTTTTTG+AGG + chr4_3:27751499-27751518 None:intergenic 30.0%
! ATCAACGAACTATTGGCTAA+TGG - chr4_3:27749253-27749272 Msa0636770:three_prime_UTR 35.0%
CAATGGAAAAGAGTCACATA+TGG + chr4_3:27749367-27749386 None:intergenic 35.0%
! CATATGTGACTCTTTTCCAT+TGG - chr4_3:27749365-27749384 Msa0636770:three_prime_UTR 35.0%
! GATCTTGCAGAGATGATTTT+AGG - chr4_3:27749542-27749561 Msa0636770:CDS 35.0%
! CTACAAGGAATTTGGTGATA+GGG - chr4_3:27749582-27749601 Msa0636770:CDS 35.0%
GGATTACTTTGAATGAACCA+TGG - chr4_3:27749614-27749633 Msa0636770:intron 35.0%
AGCATGAATGCTTATGCATA+TGG - chr4_3:27749643-27749662 Msa0636770:intron 35.0%
TGGTTAAATCTGAATTGCAC+AGG - chr4_3:27749694-27749713 Msa0636770:intron 35.0%
TTAAATCTGAATTGCACAGG+AGG - chr4_3:27749697-27749716 Msa0636770:intron 35.0%
AAAACAGCAGACCTGATATT+TGG + chr4_3:27749800-27749819 None:intergenic 35.0%
TATTCGTAGCTCAACACTAA+CGG - chr4_3:27750103-27750122 Msa0636770:intron 35.0%
! GGATAGTTTCCTTTTGTGAT+TGG + chr4_3:27750400-27750419 None:intergenic 35.0%
! GATTCTTCTTTGGAGAACTT+TGG + chr4_3:27750457-27750476 None:intergenic 35.0%
GATAAGAGAGTCAGTTTGTA+TGG + chr4_3:27750575-27750594 None:intergenic 35.0%
ATATATACCATTGGACCAAG+GGG + chr4_3:27750761-27750780 None:intergenic 35.0%
TATTCTTGACGTAAAGCAAC+AGG + chr4_3:27750943-27750962 None:intergenic 35.0%
GTGTGACAAAATCCATTGAT+AGG - chr4_3:27751075-27751094 Msa0636770:intron 35.0%
ATTATGTTCAAGCTGCAATC+AGG - chr4_3:27751184-27751203 Msa0636770:CDS 35.0%
ATCAATAACTAGAAGCCTAG+AGG + chr4_3:27751233-27751252 None:intergenic 35.0%
CATTGTTGGATAACCATGAA+TGG - chr4_3:27751375-27751394 Msa0636770:five_prime_UTR 35.0%
TTTGCAGAAGGAAAGCTTAG+TGG - chr4_3:27749190-27749209 Msa0636770:three_prime_UTR 40.0%
CAACCTCATCAACGAACTAT+TGG - chr4_3:27749246-27749265 Msa0636770:three_prime_UTR 40.0%
TAGCCAATAGTTCGTTGATG+AGG + chr4_3:27749252-27749271 None:intergenic 40.0%
!!! ATGACGGTTTTTTAAGCCCT+CGG - chr4_3:27749416-27749435 Msa0636770:exon 40.0%
AAATCATCTCTGCAAGATCG+CGG + chr4_3:27749541-27749560 None:intergenic 40.0%
GACCTTTGCTACAAGGAATT+TGG - chr4_3:27749574-27749593 Msa0636770:CDS 40.0%
CACCAAATTCCTTGTAGCAA+AGG + chr4_3:27749579-27749598 None:intergenic 40.0%
! GCTACAAGGAATTTGGTGAT+AGG - chr4_3:27749581-27749600 Msa0636770:CDS 40.0%
! TTGGTGATAGGGTGAAACAT+TGG - chr4_3:27749593-27749612 Msa0636770:CDS 40.0%
TGCATATGGAAAGTTTGCAC+CGG - chr4_3:27749657-27749676 Msa0636770:intron 40.0%
GAAATGCAGGCATCTCAATA+TGG - chr4_3:27749960-27749979 Msa0636770:CDS 40.0%
GGATTACCTTACTCTCTCAT+TGG - chr4_3:27749991-27750010 Msa0636770:CDS 40.0%
CTCATACCAATGAGAGAGTA+AGG + chr4_3:27750000-27750019 None:intergenic 40.0%
! TCCAAAAAGCATGCGATCTT+TGG - chr4_3:27750417-27750436 Msa0636770:CDS 40.0%
! ACCAAAGATCGCATGCTTTT+TGG + chr4_3:27750421-27750440 None:intergenic 40.0%
! AAAAGCATGCGATCTTTGGT+TGG - chr4_3:27750421-27750440 Msa0636770:CDS 40.0%
AAGATCCTCGGATTCTTCTT+TGG + chr4_3:27750467-27750486 None:intergenic 40.0%
AGAAGAATCCGAGGATCTTA+AGG - chr4_3:27750468-27750487 Msa0636770:CDS 40.0%
GAAGAATCCGAGGATCTTAA+GGG - chr4_3:27750469-27750488 Msa0636770:CDS 40.0%
AAGAATCCGAGGATCTTAAG+GGG - chr4_3:27750470-27750489 Msa0636770:CDS 40.0%
GTTTAGGCCAAGAAAATCGA+AGG + chr4_3:27750497-27750516 None:intergenic 40.0%
ATATGCAGTCTGCTTCAAGT+TGG - chr4_3:27750888-27750907 Msa0636770:CDS 40.0%
TGGTTATGCATTTATCCGAG+AGG - chr4_3:27750908-27750927 Msa0636770:CDS 40.0%
TGCATTTATCCGAGAGGATT+AGG - chr4_3:27750914-27750933 Msa0636770:CDS 40.0%
AACAGGTTTCCTAATCCTCT+CGG + chr4_3:27750926-27750945 None:intergenic 40.0%
! GATTCTTCGAGTGACAGTTT+TGG + chr4_3:27751120-27751139 None:intergenic 40.0%
ACCTTTATGCATAACAGGGA+AGG - chr4_3:27751323-27751342 Msa0636770:five_prime_UTR 40.0%
ACCTTCCCTGTTATGCATAA+AGG + chr4_3:27751327-27751346 None:intergenic 40.0%
! AGGGAAGGTGTGAATGTAAA+GGG - chr4_3:27751338-27751357 Msa0636770:five_prime_UTR 40.0%
GATAACCATGAATGGGAATC+TGG - chr4_3:27751383-27751402 Msa0636770:five_prime_UTR 40.0%
GAAAAGACACCCAAAACTCT+CGG - chr4_3:27751454-27751473 Msa0636770:intron 40.0%
!! TACTCATCCTCTAAGGCTTG+AGG + chr4_3:27749397-27749416 None:intergenic 45.0%
GCCTTAGAGGATGAGTATGA+CGG - chr4_3:27749400-27749419 Msa0636770:three_prime_UTR 45.0%
ACCGTCATACTCATCCTCTA+AGG + chr4_3:27749404-27749423 None:intergenic 45.0%
GCATATGGAAAGTTTGCACC+GGG - chr4_3:27749658-27749677 Msa0636770:intron 45.0%
AACCAATCAGAACATCGACC+CGG + chr4_3:27749679-27749698 None:intergenic 45.0%
GAATTGCACAGGAGGTGATT+CGG - chr4_3:27749705-27749724 Msa0636770:intron 45.0%
AATTGCACAGGAGGTGATTC+GGG - chr4_3:27749706-27749725 Msa0636770:intron 45.0%
! TGGTAGTGCGCAGTCAAATA+CGG + chr4_3:27749739-27749758 None:intergenic 45.0%
ACTCTCTCATTGGTATGAGC+CGG - chr4_3:27750001-27750020 Msa0636770:CDS 45.0%
AACATCTGCTTTCGCTTGAG+AGG + chr4_3:27750027-27750046 None:intergenic 45.0%
ACCATCCAAACATGAAGTCG+AGG + chr4_3:27750067-27750086 None:intergenic 45.0%
! CTTTGGAGAACTTTGGTAGC+CGG + chr4_3:27750450-27750469 None:intergenic 45.0%
GTTCTCCAAAGAAGAATCCG+AGG - chr4_3:27750459-27750478 Msa0636770:CDS 45.0%
! AAGGGGTCCTTCGATTTTCT+TGG - chr4_3:27750487-27750506 Msa0636770:CDS 45.0%
AGAGAGTCAGTTTGTATGGC+TGG + chr4_3:27750571-27750590 None:intergenic 45.0%
TCGATGACAGTTCATCGTGA+TGG - chr4_3:27750731-27750750 Msa0636770:intron 45.0%
AACTCATCGCGACCTATCAA+TGG + chr4_3:27751090-27751109 None:intergenic 45.0%
GCTTTATCTGAAGAGCCTCT+AGG - chr4_3:27751215-27751234 Msa0636770:CDS 45.0%
! CAGGGAAGGTGTGAATGTAA+AGG - chr4_3:27751337-27751356 Msa0636770:five_prime_UTR 45.0%
TGAAGCCAGATTCCCATTCA+TGG + chr4_3:27751391-27751410 None:intergenic 45.0%
! ACCAATGTGCCGAGAGTTTT+GGG + chr4_3:27751466-27751485 None:intergenic 45.0%
! AACCAATGTGCCGAGAGTTT+TGG + chr4_3:27751467-27751486 None:intergenic 45.0%
!!! ATATTTTAGAAATAATATTT+TGG + chr4_3:27750845-27750864 None:intergenic 5.0%
!!! TTTAGTTTTAATTTTTTTAA+TGG - chr4_3:27751654-27751673 Msa0636770:intron 5.0%
GCAGAAGGAAAGCTTAGTGG+AGG - chr4_3:27749193-27749212 Msa0636770:three_prime_UTR 50.0%
! AGTGGAGGTGTAAACCGTGA+AGG - chr4_3:27749208-27749227 Msa0636770:three_prime_UTR 50.0%
! GTGTCACTCACACAATCCGA+GGG + chr4_3:27749435-27749454 None:intergenic 50.0%
CTACGCTGACCTTTGCTACA+AGG - chr4_3:27749567-27749586 Msa0636770:CDS 50.0%
GCATTCATGCTCACACTCCA+TGG + chr4_3:27749634-27749653 None:intergenic 50.0%
ATTGCACAGGAGGTGATTCG+GGG - chr4_3:27749707-27749726 Msa0636770:intron 50.0%
CAGCAGCATGAGCAAGAAGT+TGG + chr4_3:27749759-27749778 None:intergenic 50.0%
GATGTTGATGCTGCACAACG+AGG - chr4_3:27750041-27750060 Msa0636770:CDS 50.0%
GCCTCGACTTCATGTTTGGA+TGG - chr4_3:27750063-27750082 Msa0636770:intron 50.0%
TGCGATCTTTGGTTGGAAGC+CGG - chr4_3:27750428-27750447 Msa0636770:CDS 50.0%
GAAGGACCCCTTAAGATCCT+CGG + chr4_3:27750479-27750498 None:intergenic 50.0%
AGGTGCATCAGCAGCATAAG+AGG + chr4_3:27750530-27750549 None:intergenic 50.0%
! GTCAGTTTGTATGGCTGGTC+TGG + chr4_3:27750566-27750585 None:intergenic 50.0%
! TCTGGCTTCAGCTTGCGATT+TGG - chr4_3:27751401-27751420 Msa0636770:intron 50.0%
! GCGATTTGGACTCGTCTTTG+TGG - chr4_3:27751415-27751434 Msa0636770:intron 50.0%
ACCCAAAACTCTCGGCACAT+TGG - chr4_3:27751462-27751481 Msa0636770:intron 50.0%
AGGCTTGAGGAACGTCCCAA+TGG + chr4_3:27749384-27749403 None:intergenic 55.0%
GGACGTTCCTCAAGCCTTAG+AGG - chr4_3:27749387-27749406 Msa0636770:three_prime_UTR 55.0%
!! GGTGTCACTCACACAATCCG+AGG + chr4_3:27749436-27749455 None:intergenic 55.0%
CACCGGGTCGATGTTCTGAT+TGG - chr4_3:27749674-27749693 Msa0636770:intron 55.0%
TCTGCTTTCGCTTGAGAGGC+CGG + chr4_3:27750023-27750042 None:intergenic 55.0%
CGAGGCCTCGACTTCATGTT+TGG - chr4_3:27750059-27750078 Msa0636770:intron 55.0%
GGTCTGGCATCGCGTAAGTG+AGG + chr4_3:27750550-27750569 None:intergenic 60.0%
CATCGTGATGGCAAGCCCCT+TGG - chr4_3:27750743-27750762 Msa0636770:intron 60.0%
TGGCAAGCCCCTTGGTCCAA+TGG - chr4_3:27750751-27750770 Msa0636770:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 27749129 27751827 27749129 ID=Msa0636770;Name=Msa0636770
chr4_3 mRNA 27749129 27751827 27749129 ID=Msa0636770-mRNA-1;Parent=Msa0636770;Name=Msa0636770-mRNA-1;_AED=0.17;_eAED=0.17;_QI=328|1|1|1|0.87|0.77|9|295|310
chr4_3 exon 27749129 27749616 27749129 ID=Msa0636770-mRNA-1:exon:6873;Parent=Msa0636770-mRNA-1
chr4_3 exon 27749751 27749859 27749751 ID=Msa0636770-mRNA-1:exon:6872;Parent=Msa0636770-mRNA-1
chr4_3 exon 27749958 27750060 27749958 ID=Msa0636770-mRNA-1:exon:6871;Parent=Msa0636770-mRNA-1
chr4_3 exon 27750184 27750215 27750184 ID=Msa0636770-mRNA-1:exon:6870;Parent=Msa0636770-mRNA-1
chr4_3 exon 27750352 27750569 27750352 ID=Msa0636770-mRNA-1:exon:6869;Parent=Msa0636770-mRNA-1
chr4_3 exon 27750872 27750987 27750872 ID=Msa0636770-mRNA-1:exon:6868;Parent=Msa0636770-mRNA-1
chr4_3 exon 27751149 27751404 27751149 ID=Msa0636770-mRNA-1:exon:6867;Parent=Msa0636770-mRNA-1
chr4_3 exon 27751513 27751600 27751513 ID=Msa0636770-mRNA-1:exon:6866;Parent=Msa0636770-mRNA-1
chr4_3 exon 27751682 27751827 27751682 ID=Msa0636770-mRNA-1:exon:6865;Parent=Msa0636770-mRNA-1
chr4_3 five_prime_UTR 27751682 27751827 27751682 ID=Msa0636770-mRNA-1:five_prime_utr;Parent=Msa0636770-mRNA-1
chr4_3 five_prime_UTR 27751513 27751600 27751513 ID=Msa0636770-mRNA-1:five_prime_utr;Parent=Msa0636770-mRNA-1
chr4_3 five_prime_UTR 27751311 27751404 27751311 ID=Msa0636770-mRNA-1:five_prime_utr;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27751149 27751310 27751149 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27750872 27750987 27750872 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27750352 27750569 27750352 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27750184 27750215 27750184 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27749958 27750060 27749958 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27749751 27749859 27749751 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 CDS 27749424 27749616 27749424 ID=Msa0636770-mRNA-1:cds;Parent=Msa0636770-mRNA-1
chr4_3 three_prime_UTR 27749129 27749423 27749129 ID=Msa0636770-mRNA-1:three_prime_utr;Parent=Msa0636770-mRNA-1
Gene Sequence

>Msa0636770

ATGAATGCTTATGCATATGGAAAGTTTGCACCGGGTCGATGTTCTGATTGGTTAAATCTGAATTGCACAGGAGGTGATTCGGGGACAGAACCGTATTTGACTGCGCACTACCAACTTCTTGCTCATGCTGCTGCTACAAAACTATACAAGACCAAATATCAGGCATCTCAATATGGTATAATAGGGATTACCTTACTCTCTCATTGGTATGAGCCGGCCTCTCAAGCGAAAGCAGATGTTGATGCTGCACAACGAGGCCTCGACTTCATGTTTGGATGGTATATGGATCCAATCACAAAAGGAAACTATCCAAAAAGCATGCGATCTTTGGTTGGAAGCCGGCTACCAAAGTTCTCCAAAGAAGAATCCGAGGATCTTAAGGGGTCCTTCGATTTTCTTGGCCTAAACTATTACTCTTCCTCTTATGCTGCTGATGCACCTCACTTACGCGATGCCAGACCAGCCATACAAACTGACTCTCTTATCAATGCTACATTTCATCGTGATGGCAAGCCCCTTGGTCCAATGTCTGCTTCAAGTTGGTTATGCATTTATCCGAGAGGATTAGGAAACCTGTTGCTTTACGTCAAGAATAAGTACGACAACCCCATAATATACATTACTGAAAATGGTCGCGATGAGTTCAACGATCCAAAACTGTCACTCGAAGAATCCCTTTTAGATACTTATAGAATCGATTACTTTTATCGTCATCTTTATTATGTTCAAGCTGCAATCAGGGAAGGTGTGAATGTAAAGGGATATTTTGCATGGTCATTGTTGGATAACCATGAATGGGAATCTGGCTTCAGCTTGCGATTTGGACTCGTCTTTGTGGATTATAATGACGACTTGAAAAGACACCCAAAACTCTCGGCACATTGGTTCAAGAATTTCCTCAAAAAATCTTGCCAAGAAAAGTGTTCTGTTTAA
Protein sequence

>Msa0636770

MNAYAYGKFAPGRCSDWLNLNCTGGDSGTEPYLTAHYQLLAHAAATKLYKTKYQASQYGIIGITLLSHWYEPASQAKADVDAAQRGLDFMFGWYMDPITKGNYPKSMRSLVGSRLPKFSKEESEDLKGSFDFLGLNYYSSSYAADAPHLRDARPAIQTDSLINATFHRDGKPLGPMSASSWLCIYPRGLGNLLLYVKNKYDNPIIYITENGRDEFNDPKLSLEESLLDTYRIDYFYRHLYYVQAAIREGVNVKGYFAWSLLDNHEWESGFSLRFGLVFVDYNDDLKRHPKLSAHWFKNFLKKSCQEKCSV*