Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464020 | XP_039684567.1 | 95.413 | 436 | 20 | 0 | 1 | 436 | 1 | 436 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464020 | sp|P0DO21|GIP2_NICBE | 55.604 | 455 | 163 | 12 | 1 | 434 | 1 | 437 | 5.61e-158 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464020 | G7I467 | 95.413 | 436 | 20 | 0 | 1 | 436 | 1 | 436 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033970 | Msa1464020 | 0.807280 | 5.460092e-50 | -8.615850e-47 |
| Msa0076640 | Msa1464020 | 0.842676 | 2.236041e-58 | -8.615850e-47 |
| Msa0100750 | Msa1464020 | 0.912699 | 1.443590e-83 | -8.615850e-47 |
| Msa1375730 | Msa1464020 | 0.800477 | 1.415149e-48 | -8.615850e-47 |
| Msa1459920 | Msa1464020 | 0.802899 | 4.506836e-49 | -8.615850e-47 |
| Msa1459930 | Msa1464020 | 0.818089 | 2.350825e-52 | -8.615850e-47 |
| Msa0604140 | Msa1464020 | 0.803093 | 4.109440e-49 | -8.615850e-47 |
| Msa0614290 | Msa1464020 | 0.819215 | 1.305779e-52 | -8.615850e-47 |
| Msa0636740 | Msa1464020 | 0.832914 | 7.201253e-56 | -8.615850e-47 |
| Msa0636770 | Msa1464020 | 0.826132 | 3.209010e-54 | -8.615850e-47 |
| Msa0638820 | Msa1464020 | 0.801908 | 7.211753e-49 | -8.615850e-47 |
| Msa0645450 | Msa1464020 | 0.826884 | 2.123103e-54 | -8.615850e-47 |
| Msa0652700 | Msa1464020 | 0.816652 | 4.952025e-52 | -8.615850e-47 |
| Msa0697510 | Msa1464020 | 0.816764 | 4.673532e-52 | -8.615850e-47 |
| Msa0697520 | Msa1464020 | 0.803713 | 3.057173e-49 | -8.615850e-47 |
| Msa0744560 | Msa1464020 | 0.800693 | 1.278738e-48 | -8.615850e-47 |
| Msa0826360 | Msa1464020 | 0.821738 | 3.441052e-53 | -8.615850e-47 |
| Msa0826450 | Msa1464020 | 0.807988 | 3.861712e-50 | -8.615850e-47 |
| Msa0128030 | Msa1464020 | 0.813115 | 3.013772e-51 | -8.615850e-47 |
| Msa0145430 | Msa1464020 | 0.801991 | 6.932347e-49 | -8.615850e-47 |
| Msa0182020 | Msa1464020 | 0.829069 | 6.326621e-55 | -8.615850e-47 |
| Msa0224210 | Msa1464020 | 0.876631 | 1.197237e-68 | -8.615850e-47 |
| Msa0390790 | Msa1464020 | 0.875681 | 2.544771e-68 | -8.615850e-47 |
| Msa0414720 | Msa1464020 | 0.843181 | 1.640628e-58 | -8.615850e-47 |
| Msa0459630 | Msa1464020 | 0.842559 | 2.400931e-58 | -8.615850e-47 |
| Msa0480770 | Msa1464020 | 0.804480 | 2.116738e-49 | -8.615850e-47 |
| Msa1026080 | Msa1464020 | 0.802749 | 4.839427e-49 | -8.615850e-47 |
| Msa0246140 | Msa1464020 | 0.803105 | 4.084813e-49 | -8.615850e-47 |
| Msa0265480 | Msa1464020 | 0.820376 | 7.088254e-53 | -8.615850e-47 |
| Msa0340370 | Msa1464020 | 0.855451 | 6.254820e-62 | -8.615850e-47 |
| Msa1157200 | Msa1464020 | 0.802000 | 6.903126e-49 | -8.615850e-47 |
| Msa1204240 | Msa1464020 | 0.803346 | 3.643054e-49 | -8.615850e-47 |
| Msa0506360 | Msa1464020 | 0.831057 | 2.071426e-55 | -8.615850e-47 |
| Msa0506370 | Msa1464020 | 0.829528 | 4.895737e-55 | -8.615850e-47 |
| Msa0508160 | Msa1464020 | 0.809726 | 1.641299e-50 | -8.615850e-47 |
| Msa0537340 | Msa1464020 | 0.819211 | 1.308386e-52 | -8.615850e-47 |
| Msa0560280 | Msa1464020 | 0.845730 | 3.384630e-59 | -8.615850e-47 |
| Msa0865810 | Msa1464020 | 0.811952 | 5.410846e-51 | -8.615850e-47 |
| Msa0865830 | Msa1464020 | 0.811280 | 7.576011e-51 | -8.615850e-47 |
| Msa0870120 | Msa1464020 | 0.811721 | 6.077790e-51 | -8.615850e-47 |
| Msa0935830 | Msa1464020 | 0.816357 | 5.766109e-52 | -8.615850e-47 |
| Msa0945230 | Msa1464020 | 0.807047 | 6.115408e-50 | -8.615850e-47 |
| Msa0973000 | Msa1464020 | 0.818071 | 2.373195e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464020 | MtrunA17_Chr1g0187841 | 95.413 | 436 | 20 | 0 | 1 | 436 | 1 | 436 | 0.0 | 840 |
| Msa1464020 | MtrunA17_Chr1g0185661 | 53.333 | 450 | 174 | 8 | 3 | 435 | 655 | 1085 | 3.04e-146 | 444 |
| Msa1464020 | MtrunA17_Chr1g0185661 | 51.025 | 439 | 176 | 11 | 8 | 428 | 9 | 426 | 1.32e-130 | 403 |
| Msa1464020 | MtrunA17_Chr2g0287821 | 50.333 | 451 | 183 | 9 | 1 | 435 | 32 | 457 | 1.21e-142 | 415 |
| Msa1464020 | MtrunA17_Chr1g0185651 | 50.679 | 442 | 174 | 9 | 20 | 435 | 27 | 450 | 2.64e-140 | 409 |
| Msa1464020 | MtrunA17_Chr4g0065581 | 44.394 | 437 | 191 | 14 | 28 | 430 | 33 | 451 | 1.62e-99 | 305 |
| Msa1464020 | MtrunA17_Chr2g0287831 | 38.717 | 421 | 206 | 11 | 31 | 434 | 26 | 411 | 7.76e-79 | 250 |
| Msa1464020 | MtrunA17_Chr2g0287811 | 38.667 | 450 | 217 | 16 | 5 | 427 | 2 | 419 | 1.97e-73 | 236 |
| Msa1464020 | MtrunA17_Chr7g0273041 | 33.983 | 462 | 236 | 15 | 7 | 435 | 11 | 436 | 4.55e-70 | 228 |
| Msa1464020 | MtrunA17_Chr2g0287781 | 39.198 | 449 | 224 | 13 | 1 | 432 | 1 | 417 | 1.21e-66 | 231 |
| Msa1464020 | MtrunA17_Chr2g0287781 | 36.739 | 460 | 225 | 16 | 1 | 431 | 462 | 884 | 3.93e-64 | 223 |
| Msa1464020 | MtrunA17_Chr2g0287781 | 36.522 | 460 | 226 | 16 | 1 | 431 | 924 | 1346 | 6.04e-64 | 223 |
| Msa1464020 | MtrunA17_Chr2g0287841 | 36.650 | 412 | 217 | 12 | 18 | 409 | 41 | 428 | 1.25e-64 | 214 |
| Msa1464020 | MtrunA17_Chr2g0287861 | 37.717 | 403 | 205 | 13 | 28 | 409 | 27 | 404 | 3.01e-64 | 213 |
| Msa1464020 | MtrunA17_Chr3g0095891 | 26.598 | 391 | 222 | 14 | 55 | 420 | 106 | 456 | 2.38e-19 | 90.1 |
| Msa1464020 | MtrunA17_Chr7g0267171 | 25.380 | 461 | 246 | 20 | 10 | 417 | 45 | 460 | 3.75e-16 | 80.5 |
| Msa1464020 | MtrunA17_Chr5g0442921 | 25.952 | 420 | 235 | 18 | 32 | 420 | 177 | 551 | 4.34e-16 | 80.5 |
| Msa1464020 | MtrunA17_Chr1g0210201 | 24.700 | 417 | 239 | 13 | 18 | 417 | 104 | 462 | 8.23e-16 | 79.3 |
| Msa1464020 | MtrunA17_Chr8g0390761 | 22.704 | 392 | 236 | 14 | 44 | 420 | 114 | 453 | 5.14e-14 | 73.6 |
| Msa1464020 | MtrunA17_Chr7g0275731 | 26.142 | 394 | 214 | 17 | 46 | 417 | 141 | 479 | 1.50e-13 | 72.4 |
| Msa1464020 | MtrunA17_Chr3g0130931 | 25.708 | 424 | 224 | 19 | 28 | 417 | 77 | 443 | 2.82e-13 | 71.2 |
| Msa1464020 | MtrunA17_Chr5g0399171 | 24.080 | 299 | 171 | 12 | 144 | 417 | 197 | 464 | 4.30e-12 | 67.8 |
| Msa1464020 | MtrunA17_Chr4g0001991 | 27.305 | 282 | 150 | 12 | 144 | 417 | 278 | 512 | 1.91e-11 | 65.9 |
| Msa1464020 | MtrunA17_Chr4g0056211 | 23.469 | 294 | 170 | 12 | 148 | 417 | 203 | 465 | 4.72e-11 | 64.7 |
| Msa1464020 | MtrunA17_Chr4g0053721 | 23.333 | 390 | 235 | 17 | 47 | 417 | 81 | 425 | 6.41e-11 | 64.3 |
| Msa1464020 | MtrunA17_Chr5g0401601 | 23.077 | 390 | 236 | 17 | 47 | 417 | 89 | 433 | 8.05e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464020 | AT1G03220.1 | 51.570 | 446 | 178 | 10 | 9 | 435 | 6 | 432 | 8.66e-141 | 410 |
| Msa1464020 | AT1G03230.1 | 49.336 | 452 | 193 | 9 | 1 | 435 | 1 | 433 | 1.20e-135 | 397 |
| Msa1464020 | AT5G19120.1 | 34.411 | 433 | 210 | 13 | 1 | 417 | 1 | 375 | 3.43e-56 | 191 |
| Msa1464020 | AT5G19110.1 | 31.519 | 441 | 251 | 14 | 1 | 430 | 1 | 401 | 2.28e-51 | 178 |
| Msa1464020 | AT5G19110.2 | 31.519 | 441 | 251 | 14 | 1 | 430 | 37 | 437 | 5.22e-51 | 178 |
| Msa1464020 | AT5G48430.1 | 30.047 | 426 | 231 | 17 | 27 | 431 | 24 | 403 | 2.44e-43 | 157 |
| Msa1464020 | AT5G19100.1 | 32.869 | 359 | 177 | 13 | 64 | 410 | 59 | 365 | 1.40e-41 | 152 |
| Msa1464020 | AT3G52500.1 | 24.043 | 470 | 250 | 22 | 11 | 417 | 37 | 462 | 7.84e-16 | 79.7 |
| Msa1464020 | AT3G25700.1 | 23.913 | 414 | 243 | 18 | 35 | 417 | 72 | 444 | 2.18e-15 | 78.2 |
| Msa1464020 | AT1G09750.1 | 26.048 | 334 | 209 | 9 | 28 | 346 | 85 | 395 | 3.98e-15 | 77.4 |
| Msa1464020 | AT3G54400.1 | 23.333 | 390 | 228 | 13 | 44 | 417 | 85 | 419 | 8.00e-15 | 76.6 |
| Msa1464020 | AT2G42980.1 | 24.940 | 417 | 246 | 15 | 29 | 417 | 142 | 519 | 5.02e-14 | 74.3 |
| Msa1464020 | AT1G25510.1 | 23.025 | 443 | 255 | 14 | 4 | 419 | 97 | 480 | 2.82e-13 | 72.0 |
| Msa1464020 | AT5G02190.1 | 24.682 | 393 | 220 | 20 | 60 | 417 | 86 | 437 | 3.96e-13 | 71.2 |
| Msa1464020 | AT1G01300.1 | 25.304 | 411 | 232 | 15 | 28 | 417 | 123 | 479 | 4.50e-13 | 71.2 |
| Msa1464020 | AT5G36260.1 | 24.235 | 425 | 247 | 18 | 23 | 417 | 49 | 428 | 8.56e-13 | 70.5 |
| Msa1464020 | AT3G18490.1 | 23.601 | 411 | 241 | 16 | 25 | 417 | 140 | 495 | 1.46e-12 | 69.7 |
| Msa1464020 | AT2G39710.1 | 23.636 | 385 | 230 | 18 | 60 | 417 | 78 | 425 | 8.19e-12 | 67.4 |
Find 78 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAATCTATTAGAGTTTC+TGG | 0.165523 | tig0043838:-2757 | Msa1464020:CDS |
| AGGATTAACAGTGCTAATTT+TGG | 0.220235 | tig0043838:+2675 | Msa1464020:intergenic |
| CCAATGACTTCAATCATTAT+TGG | 0.248885 | tig0043838:-2337 | Msa1464020:CDS |
| AATAAATTTGCAATTTGTTT+AGG | 0.256299 | tig0043838:-2934 | Msa1464020:CDS |
| ACTGCTCCAAGTTCTTTCTT+AGG | 0.269389 | tig0043838:-2808 | Msa1464020:CDS |
| TAATTTGTTGCAATTTGATT+TGG | 0.302015 | tig0043838:-2296 | Msa1464020:CDS |
| TGGTTCCACCAAATCCATTT+TGG | 0.303617 | tig0043838:+2695 | Msa1464020:intergenic |
| TCTATAGACCAAAATGGATT+TGG | 0.304145 | tig0043838:-2703 | Msa1464020:CDS |
| GAACTTGGAGCAGTGCTAAC+AGG | 0.319657 | tig0043838:+2817 | Msa1464020:intergenic |
| TCCACAAATGGAAACTATTC+TGG | 0.339835 | tig0043838:-3105 | Msa1464020:CDS |
| GGCTGAAGTGTCTCTGGTTA+TGG | 0.349043 | tig0043838:+3401 | Msa1464020:intergenic |
| CATTATTGGTGCACATCAAT+TGG | 0.350502 | tig0043838:-2323 | Msa1464020:CDS |
| ATGGGAAGAACTAGTGCTTT+TGG | 0.353622 | tig0043838:+3420 | Msa1464020:intergenic |
| ACCAGAATAGTTTCCATTTG+TGG | 0.353898 | tig0043838:+3104 | Msa1464020:intergenic |
| AATGTGGTTTGGAATATTAT+TGG | 0.355763 | tig0043838:-2475 | Msa1464020:CDS |
| TGTTAATCCTTACACAATAA+TGG | 0.361315 | tig0043838:-2662 | Msa1464020:CDS |
| TCACCTTACAACACTGTAAC+AGG | 0.361909 | tig0043838:-3174 | Msa1464020:CDS |
| AGTATTAGTTCTTCAAGAAT+AGG | 0.372908 | tig0043838:-2538 | Msa1464020:CDS |
| CCAATAATGATTGAAGTCAT+TGG | 0.377436 | tig0043838:+2337 | Msa1464020:intergenic |
| GGTTCAAATGTTGTACAAAA+TGG | 0.378087 | tig0043838:-3045 | Msa1464020:CDS |
| TGATAAGGATGTGATTTGTT+TGG | 0.378748 | tig0043838:-2428 | Msa1464020:CDS |
| AGATCAATGGTTAGGTTGAT+TGG | 0.385333 | tig0043838:+3330 | Msa1464020:intergenic |
| GTTGAACCTGTAGCACCATT+TGG | 0.387509 | tig0043838:-2580 | Msa1464020:CDS |
| GATAAGGATGTGATTTGTTT+GGG | 0.395759 | tig0043838:-2427 | Msa1464020:CDS |
| GAAGACTCCATTATTGTGTA+AGG | 0.405084 | tig0043838:+2655 | Msa1464020:intergenic |
| GCTGAAGTGTCTCTGGTTAT+GGG | 0.426237 | tig0043838:+3402 | Msa1464020:intergenic |
| AAATCAGATGAGTATTTCAT+TGG | 0.428391 | tig0043838:-2781 | Msa1464020:CDS |
| GTCAAAGGTATGGCTGGTCT+TGG | 0.431367 | tig0043838:-3009 | Msa1464020:CDS |
| AATTTGATTTGGCTACTTCA+AGG | 0.431390 | tig0043838:-2285 | Msa1464020:CDS |
| GATTTGGCTACTTCAAGGCT+TGG | 0.435992 | tig0043838:-2280 | Msa1464020:CDS |
| TCAAAGAGAGAGAGGTGAAA+AGG | 0.444468 | tig0043838:+3478 | Msa1464020:intergenic |
| GTTTCAGTTCAATCCACAAA+TGG | 0.450626 | tig0043838:-3117 | Msa1464020:CDS |
| TGTTGAGGCTGAAGTGTCTC+TGG | 0.458870 | tig0043838:+3395 | Msa1464020:intergenic |
| CATGTTCCAAATGGTGCTAC+AGG | 0.465297 | tig0043838:+2574 | Msa1464020:intergenic |
| ATCAACCTAACCATTGATCT+TGG | 0.483505 | tig0043838:-3327 | Msa1464020:CDS |
| TTGATTTGAGTTGTGTATTG+TGG | 0.483818 | tig0043838:+3372 | Msa1464020:intergenic |
| AGATCAATGGAAGGAACATC+TGG | 0.487406 | tig0043838:+2514 | Msa1464020:intergenic |
| AATGGTTCGTATTAATGATA+AGG | 0.488541 | tig0043838:-2443 | Msa1464020:CDS |
| TGAGATGAGCTACATAGGAT+TGG | 0.490397 | tig0043838:+3249 | Msa1464020:intergenic |
| CTAACAGGGTTTGTTAAAAG+AGG | 0.490487 | tig0043838:+2832 | Msa1464020:intergenic |
| ATAGACCAAAATGGATTTGG+TGG | 0.508375 | tig0043838:-2700 | Msa1464020:CDS |
| AAGGGTGTCAAAGGTATGGC+TGG | 0.510377 | tig0043838:-3015 | Msa1464020:CDS |
| ATTCTGCAACACTAGATCAA+TGG | 0.510620 | tig0043838:+2501 | Msa1464020:intergenic |
| TGCAGAATGAGAATGTGGTT+TGG | 0.511364 | tig0043838:-2486 | Msa1464020:CDS |
| GTAACAGGTGTGTCCACATC+TGG | 0.519945 | tig0043838:-3159 | Msa1464020:CDS |
| GGAGATGATCAAAGAGAGAG+AGG | 0.520558 | tig0043838:+3470 | Msa1464020:intergenic |
| ATTTGTTTAGGTACTCAAGA+TGG | 0.523453 | tig0043838:-2922 | Msa1464020:CDS |
| ACACCTGTTACAGTGTTGTA+AGG | 0.525207 | tig0043838:+3171 | Msa1464020:intergenic |
| TGCTAAGGGTGTCAAAGGTA+TGG | 0.525240 | tig0043838:-3019 | Msa1464020:CDS |
| AGTTTAGCTGAGGAAGCCAT+TGG | 0.530821 | tig0043838:+3507 | Msa1464020:intergenic |
| TCATCAGTGTTCAATAGATA+AGG | 0.532661 | tig0043838:+2877 | Msa1464020:intergenic |
| ATAGCCACCACCAAGATCAA+TGG | 0.536373 | tig0043838:+3317 | Msa1464020:intergenic |
| GGTCTTGCTAAGGGTGTCAA+AGG | 0.536708 | tig0043838:-3024 | Msa1464020:CDS |
| CACCACCAAGATCAATGGTT+AGG | 0.541567 | tig0043838:+3322 | Msa1464020:intergenic |
| AACCTAACCATTGATCTTGG+TGG | 0.541576 | tig0043838:-3324 | Msa1464020:CDS |
| AACTTGGAGCAGTGCTAACA+GGG | 0.559183 | tig0043838:+2818 | Msa1464020:intergenic |
| CTTGCAAAACATGTTCCAAA+TGG | 0.563050 | tig0043838:+2565 | Msa1464020:intergenic |
| AGTTGTGTATTGTGGTGTTG+AGG | 0.567636 | tig0043838:+3380 | Msa1464020:intergenic |
| AAGGTATGGCTGGTCTTGGA+AGG | 0.572528 | tig0043838:-3005 | Msa1464020:CDS |
| TGAGGTTTGTGCTAAGGAGG+TGG | 0.573754 | tig0043838:+3449 | Msa1464020:intergenic |
| TGTACAAAATGGTCTTGCTA+AGG | 0.584326 | tig0043838:-3034 | Msa1464020:CDS |
| CTAACCATTGATCTTGGTGG+TGG | 0.588038 | tig0043838:-3321 | Msa1464020:CDS |
| AAGGATGAAGAGTTTAGCTG+AGG | 0.590503 | tig0043838:+3497 | Msa1464020:intergenic |
| AGCATTGAGATGAGCTACAT+AGG | 0.594102 | tig0043838:+3244 | Msa1464020:intergenic |
| TTCTTGGAGCATGATAATTG+TGG | 0.595441 | tig0043838:-2244 | Msa1464020:CDS |
| AAAGCTGATGAAAATTGTGA+AGG | 0.597985 | tig0043838:+2967 | Msa1464020:intergenic |
| TCTGAATGAGGTTTGTGCTA+AGG | 0.602149 | tig0043838:+3443 | Msa1464020:intergenic |
| GAATGAGGTTTGTGCTAAGG+AGG | 0.612021 | tig0043838:+3446 | Msa1464020:intergenic |
| TATTATTGGAGCTAATGCAA+TGG | 0.621482 | tig0043838:-2461 | Msa1464020:CDS |
| AATAATTAAGTTCTAAACAG+AGG | 0.625421 | tig0043838:+2204 | Msa1464020:intergenic |
| TGACTGAATGTCACCAGATG+TGG | 0.628722 | tig0043838:+3146 | Msa1464020:intergenic |
| GTACAAAATGGTCTTGCTAA+GGG | 0.632901 | tig0043838:-3033 | Msa1464020:CDS |
| GTTAGGTTGATTGGTACAAG+TGG | 0.638523 | tig0043838:+3339 | Msa1464020:intergenic |
| TGCAACACTAGATCAATGGA+AGG | 0.640859 | tig0043838:+2505 | Msa1464020:intergenic |
| TTACAGTGTTGTAAGGTGAA+CGG | 0.641762 | tig0043838:+3178 | Msa1464020:intergenic |
| AATTAAGTTCTAAACAGAGG+AGG | 0.664282 | tig0043838:+2207 | Msa1464020:intergenic |
| AGTGTTGCAGAATGAGAATG+TGG | 0.676110 | tig0043838:-2491 | Msa1464020:CDS |
| TGGTGCTACAGGTTCAACAG+TGG | 0.677434 | tig0043838:+2585 | Msa1464010:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATTTGCAATTTGTTT+AGG | - | tig0043838:2786-2805 | Msa1464020:CDS | 15.0% |
| !!! | AATAAATTTGCAATTTGTTT+AGG | - | tig0043838:2786-2805 | Msa1464020:CDS | 15.0% |
| !!! | ATTTTGGTCTATAGATAAAA+GGG | + | tig0043838:3012-3031 | Msa1464020:intergenic | 20.0% |
| !!! | TAATTTGTTGCAATTTGATT+TGG | - | tig0043838:3424-3443 | Msa1464020:CDS | 20.0% |
| !!! | ATTTTGGTCTATAGATAAAA+GGG | + | tig0043838:3012-3031 | Msa1464020:intergenic | 20.0% |
| !!! | TAATTTGTTGCAATTTGATT+TGG | - | tig0043838:3424-3443 | Msa1464020:CDS | 20.0% |
| ! | CCACAAATAAAGAAAAAGTT+AGG | + | tig0043838:2657-2676 | Msa1464020:intergenic | 25.0% |
| !!! | CCTAACTTTTTCTTTATTTG+TGG | - | tig0043838:2654-2673 | Msa1464020:CDS | 25.0% |
| ! | AAATCAGATGAGTATTTCAT+TGG | - | tig0043838:2939-2958 | Msa1464020:CDS | 25.0% |
| !!! | CATTTTGGTCTATAGATAAA+AGG | + | tig0043838:3013-3032 | Msa1464020:intergenic | 25.0% |
| !! | CTTTTATCTATAGACCAAAA+TGG | - | tig0043838:3011-3030 | Msa1464020:CDS | 25.0% |
| ! | TGTTAATCCTTACACAATAA+TGG | - | tig0043838:3058-3077 | Msa1464020:CDS | 25.0% |
| !! | AGTATTAGTTCTTCAAGAAT+AGG | - | tig0043838:3182-3201 | Msa1464020:CDS | 25.0% |
| !! | AATGTGGTTTGGAATATTAT+TGG | - | tig0043838:3245-3264 | Msa1464020:CDS | 25.0% |
| ! | AATGGTTCGTATTAATGATA+AGG | - | tig0043838:3277-3296 | Msa1464020:CDS | 25.0% |
| ! | CCACAAATAAAGAAAAAGTT+AGG | + | tig0043838:2657-2676 | Msa1464020:intergenic | 25.0% |
| !!! | CCTAACTTTTTCTTTATTTG+TGG | - | tig0043838:2654-2673 | Msa1464020:CDS | 25.0% |
| ! | AAATCAGATGAGTATTTCAT+TGG | - | tig0043838:2939-2958 | Msa1464020:CDS | 25.0% |
| !!! | CATTTTGGTCTATAGATAAA+AGG | + | tig0043838:3013-3032 | Msa1464020:intergenic | 25.0% |
| !! | CTTTTATCTATAGACCAAAA+TGG | - | tig0043838:3011-3030 | Msa1464020:CDS | 25.0% |
| ! | TGTTAATCCTTACACAATAA+TGG | - | tig0043838:3058-3077 | Msa1464020:CDS | 25.0% |
| !! | AGTATTAGTTCTTCAAGAAT+AGG | - | tig0043838:3182-3201 | Msa1464020:CDS | 25.0% |
| !! | AATGTGGTTTGGAATATTAT+TGG | - | tig0043838:3245-3264 | Msa1464020:CDS | 25.0% |
| ! | AATGGTTCGTATTAATGATA+AGG | - | tig0043838:3277-3296 | Msa1464020:CDS | 25.0% |
| !! | TTGATTTGAGTTGTGTATTG+TGG | + | tig0043838:2351-2370 | Msa1446120:intergenic | 30.0% |
| !!! | ACATAGGATTGGTTTTAAAG+TGG | + | tig0043838:2463-2482 | Msa1464020:intergenic | 30.0% |
| TGCAGTGACAAAAAAATATG+TGG | - | tig0043838:2519-2538 | Msa1464020:CDS | 30.0% | |
| GGTTCAAATGTTGTACAAAA+TGG | - | tig0043838:2675-2694 | Msa1464020:CDS | 30.0% | |
| AAAGCTGATGAAAATTGTGA+AGG | + | tig0043838:2756-2775 | Msa1464020:intergenic | 30.0% | |
| ATTTGTTTAGGTACTCAAGA+TGG | - | tig0043838:2798-2817 | Msa1464020:CDS | 30.0% | |
| TCATCAGTGTTCAATAGATA+AGG | + | tig0043838:2846-2865 | Msa1464020:intergenic | 30.0% | |
| ! | TTTTCACCTAAGAAAGAACT+TGG | + | tig0043838:2921-2940 | Msa1464020:intergenic | 30.0% |
| GTGAAATCTATTAGAGTTTC+TGG | - | tig0043838:2963-2982 | Msa1464020:CDS | 30.0% | |
| ! | TCTATAGACCAAAATGGATT+TGG | - | tig0043838:3017-3036 | Msa1464020:CDS | 30.0% |
| ! | AGGATTAACAGTGCTAATTT+TGG | + | tig0043838:3048-3067 | Msa1464020:intergenic | 30.0% |
| TATTATTGGAGCTAATGCAA+TGG | - | tig0043838:3259-3278 | Msa1464020:CDS | 30.0% | |
| !! | TGATAAGGATGTGATTTGTT+TGG | - | tig0043838:3292-3311 | Msa1464020:CDS | 30.0% |
| !! | GATAAGGATGTGATTTGTTT+GGG | - | tig0043838:3293-3312 | Msa1464020:CDS | 30.0% |
| TTTGCAAAAACTTCTCAAGT+TGG | - | tig0043838:3338-3357 | Msa1464020:CDS | 30.0% | |
| CCAATAATGATTGAAGTCAT+TGG | + | tig0043838:3386-3405 | Msa1464020:intergenic | 30.0% | |
| CCAATGACTTCAATCATTAT+TGG | - | tig0043838:3383-3402 | Msa1464020:CDS | 30.0% | |
| !! | AATTTGATTTGGCTACTTCA+AGG | - | tig0043838:3435-3454 | Msa1464020:CDS | 30.0% |
| !! | TTGATTTGAGTTGTGTATTG+TGG | + | tig0043838:2351-2370 | Msa1464020:intergenic | 30.0% |
| !!! | ACATAGGATTGGTTTTAAAG+TGG | + | tig0043838:2463-2482 | Msa1464020:intergenic | 30.0% |
| TGCAGTGACAAAAAAATATG+TGG | - | tig0043838:2519-2538 | Msa1464020:CDS | 30.0% | |
| GGTTCAAATGTTGTACAAAA+TGG | - | tig0043838:2675-2694 | Msa1464020:CDS | 30.0% | |
| AAAGCTGATGAAAATTGTGA+AGG | + | tig0043838:2756-2775 | Msa1464020:intergenic | 30.0% | |
| ATTTGTTTAGGTACTCAAGA+TGG | - | tig0043838:2798-2817 | Msa1464020:CDS | 30.0% | |
| TCATCAGTGTTCAATAGATA+AGG | + | tig0043838:2846-2865 | Msa1464020:intergenic | 30.0% | |
| ! | TTTTCACCTAAGAAAGAACT+TGG | + | tig0043838:2921-2940 | Msa1464020:intergenic | 30.0% |
| GTGAAATCTATTAGAGTTTC+TGG | - | tig0043838:2963-2982 | Msa1464020:CDS | 30.0% | |
| ! | TCTATAGACCAAAATGGATT+TGG | - | tig0043838:3017-3036 | Msa1464020:CDS | 30.0% |
| ! | AGGATTAACAGTGCTAATTT+TGG | + | tig0043838:3048-3067 | Msa1464020:intergenic | 30.0% |
| TATTATTGGAGCTAATGCAA+TGG | - | tig0043838:3259-3278 | Msa1464020:CDS | 30.0% | |
| !! | TGATAAGGATGTGATTTGTT+TGG | - | tig0043838:3292-3311 | Msa1464020:CDS | 30.0% |
| !! | GATAAGGATGTGATTTGTTT+GGG | - | tig0043838:3293-3312 | Msa1464020:CDS | 30.0% |
| TTTGCAAAAACTTCTCAAGT+TGG | - | tig0043838:3338-3357 | Msa1464020:CDS | 30.0% | |
| CCAATAATGATTGAAGTCAT+TGG | + | tig0043838:3386-3405 | Msa1464020:intergenic | 30.0% | |
| CCAATGACTTCAATCATTAT+TGG | - | tig0043838:3383-3402 | Msa1464020:CDS | 30.0% | |
| !! | AATTTGATTTGGCTACTTCA+AGG | - | tig0043838:3435-3454 | Msa1464020:CDS | 30.0% |
| !! | AGATCAATGGTTAGGTTGAT+TGG | + | tig0043838:2393-2412 | Msa1446120:intergenic | 35.0% |
| ATCAACCTAACCATTGATCT+TGG | - | tig0043838:2393-2412 | Msa1464020:CDS | 35.0% | |
| !! | TCATCTCAATGCTCACTTTT+CGG | - | tig0043838:2486-2505 | Msa1464020:CDS | 35.0% |
| TTACAGTGTTGTAAGGTGAA+CGG | + | tig0043838:2545-2564 | Msa1464020:intergenic | 35.0% | |
| GTTTCAGTTCAATCCACAAA+TGG | - | tig0043838:2603-2622 | Msa1464020:CDS | 35.0% | |
| TCCACAAATGGAAACTATTC+TGG | - | tig0043838:2615-2634 | Msa1464020:CDS | 35.0% | |
| ACCAGAATAGTTTCCATTTG+TGG | + | tig0043838:2619-2638 | Msa1464020:intergenic | 35.0% | |
| ! | TGTACAAAATGGTCTTGCTA+AGG | - | tig0043838:2686-2705 | Msa1464020:CDS | 35.0% |
| ! | GTACAAAATGGTCTTGCTAA+GGG | - | tig0043838:2687-2706 | Msa1464020:CDS | 35.0% |
| ! | CAAGATGGTGTACTTTTCTT+TGG | - | tig0043838:2813-2832 | Msa1464020:CDS | 35.0% |
| !! | CTAACAGGGTTTGTTAAAAG+AGG | + | tig0043838:2891-2910 | Msa1464020:intergenic | 35.0% |
| ! | ATAGACCAAAATGGATTTGG+TGG | - | tig0043838:3020-3039 | Msa1464020:CDS | 35.0% |
| GAAGACTCCATTATTGTGTA+AGG | + | tig0043838:3068-3087 | Msa1464020:intergenic | 35.0% | |
| CTTGCAAAACATGTTCCAAA+TGG | + | tig0043838:3158-3177 | Msa1464020:intergenic | 35.0% | |
| ATTCTGCAACACTAGATCAA+TGG | + | tig0043838:3222-3241 | Msa1464020:intergenic | 35.0% | |
| !!! | TGTGATTTGTTTGGGTTTTG+TGG | - | tig0043838:3301-3320 | Msa1464020:CDS | 35.0% |
| !!! | AACTTCTCAAGTTGGTTTTG+TGG | - | tig0043838:3346-3365 | Msa1464020:CDS | 35.0% |
| CATTATTGGTGCACATCAAT+TGG | - | tig0043838:3397-3416 | Msa1464020:CDS | 35.0% | |
| TTCTTGGAGCATGATAATTG+TGG | - | tig0043838:3476-3495 | Msa1464020:CDS | 35.0% | |
| !! | AGATCAATGGTTAGGTTGAT+TGG | + | tig0043838:2393-2412 | Msa1464020:intergenic | 35.0% |
| ATCAACCTAACCATTGATCT+TGG | - | tig0043838:2393-2412 | Msa1464020:CDS | 35.0% | |
| !! | TCATCTCAATGCTCACTTTT+CGG | - | tig0043838:2486-2505 | Msa1464020:CDS | 35.0% |
| TTACAGTGTTGTAAGGTGAA+CGG | + | tig0043838:2545-2564 | Msa1464020:intergenic | 35.0% | |
| GTTTCAGTTCAATCCACAAA+TGG | - | tig0043838:2603-2622 | Msa1464020:CDS | 35.0% | |
| TCCACAAATGGAAACTATTC+TGG | - | tig0043838:2615-2634 | Msa1464020:CDS | 35.0% | |
| ACCAGAATAGTTTCCATTTG+TGG | + | tig0043838:2619-2638 | Msa1464020:intergenic | 35.0% | |
| ! | TGTACAAAATGGTCTTGCTA+AGG | - | tig0043838:2686-2705 | Msa1464020:CDS | 35.0% |
| ! | GTACAAAATGGTCTTGCTAA+GGG | - | tig0043838:2687-2706 | Msa1464020:CDS | 35.0% |
| ! | CAAGATGGTGTACTTTTCTT+TGG | - | tig0043838:2813-2832 | Msa1464020:CDS | 35.0% |
| !! | CTAACAGGGTTTGTTAAAAG+AGG | + | tig0043838:2891-2910 | Msa1464020:intergenic | 35.0% |
| ! | ATAGACCAAAATGGATTTGG+TGG | - | tig0043838:3020-3039 | Msa1464020:CDS | 35.0% |
| GAAGACTCCATTATTGTGTA+AGG | + | tig0043838:3068-3087 | Msa1464020:intergenic | 35.0% | |
| CTTGCAAAACATGTTCCAAA+TGG | + | tig0043838:3158-3177 | Msa1464020:intergenic | 35.0% | |
| ATTCTGCAACACTAGATCAA+TGG | + | tig0043838:3222-3241 | Msa1464020:intergenic | 35.0% | |
| !!! | TGTGATTTGTTTGGGTTTTG+TGG | - | tig0043838:3301-3320 | Msa1464020:CDS | 35.0% |
| !!! | AACTTCTCAAGTTGGTTTTG+TGG | - | tig0043838:3346-3365 | Msa1464020:CDS | 35.0% |
| CATTATTGGTGCACATCAAT+TGG | - | tig0043838:3397-3416 | Msa1464020:CDS | 35.0% | |
| TTCTTGGAGCATGATAATTG+TGG | - | tig0043838:3476-3495 | Msa1464020:CDS | 35.0% | |
| AAGGATGAAGAGTTTAGCTG+AGG | + | tig0043838:2226-2245 | Msa1446120:intergenic | 40.0% | |
| TCAAAGAGAGAGAGGTGAAA+AGG | + | tig0043838:2245-2264 | Msa1446120:intergenic | 40.0% | |
| TCTGAATGAGGTTTGTGCTA+AGG | + | tig0043838:2280-2299 | Msa1446120:intergenic | 40.0% | |
| ! | TAGTGCTTTTGGTCTGAATG+AGG | + | tig0043838:2292-2311 | Msa1446120:intergenic | 40.0% |
| ! | ATGGGAAGAACTAGTGCTTT+TGG | + | tig0043838:2303-2322 | Msa1446120:intergenic | 40.0% |
| ! | AGTTGTGTATTGTGGTGTTG+AGG | + | tig0043838:2343-2362 | Msa1446120:intergenic | 40.0% |
| !! | GTTAGGTTGATTGGTACAAG+TGG | + | tig0043838:2384-2403 | Msa1446120:intergenic | 40.0% |
| AACCTAACCATTGATCTTGG+TGG | - | tig0043838:2396-2415 | Msa1464020:CDS | 40.0% | |
| !!! | ATCTTGGTGGTGGCTATTTT+TGG | - | tig0043838:2409-2428 | Msa1464020:CDS | 40.0% |
| !!! | TCTTGGTGGTGGCTATTTTT+GGG | - | tig0043838:2410-2429 | Msa1464020:CDS | 40.0% |
| TGAGATGAGCTACATAGGAT+TGG | + | tig0043838:2474-2493 | Msa1464020:intergenic | 40.0% | |
| ! | AGCATTGAGATGAGCTACAT+AGG | + | tig0043838:2479-2498 | Msa1464020:intergenic | 40.0% |
| TCACCTTACAACACTGTAAC+AGG | - | tig0043838:2546-2565 | Msa1464020:CDS | 40.0% | |
| ACACCTGTTACAGTGTTGTA+AGG | + | tig0043838:2552-2571 | Msa1464020:intergenic | 40.0% | |
| ! | GGTGTACTTTTCTTTGGTGA+TGG | - | tig0043838:2819-2838 | Msa1464020:CDS | 40.0% |
| ACTGCTCCAAGTTCTTTCTT+AGG | - | tig0043838:2912-2931 | Msa1464020:CDS | 40.0% | |
| ! | TGGTTCCACCAAATCCATTT+TGG | + | tig0043838:3028-3047 | Msa1464020:intergenic | 40.0% |
| AGATCAATGGAAGGAACATC+TGG | + | tig0043838:3209-3228 | Msa1464020:intergenic | 40.0% | |
| TGCAACACTAGATCAATGGA+AGG | + | tig0043838:3218-3237 | Msa1464020:intergenic | 40.0% | |
| AGTGTTGCAGAATGAGAATG+TGG | - | tig0043838:3229-3248 | Msa1464020:CDS | 40.0% | |
| TGCAGAATGAGAATGTGGTT+TGG | - | tig0043838:3234-3253 | Msa1464020:CDS | 40.0% | |
| !! | CTACTTCAAGGCTTGGTTTT+AGG | - | tig0043838:3447-3466 | Msa1464020:CDS | 40.0% |
| !!! | TGGTTTTAGGTCACTCTTCT+TGG | - | tig0043838:3460-3479 | Msa1464020:CDS | 40.0% |
| AAGGATGAAGAGTTTAGCTG+AGG | + | tig0043838:2226-2245 | Msa1464020:intergenic | 40.0% | |
| TCAAAGAGAGAGAGGTGAAA+AGG | + | tig0043838:2245-2264 | Msa1464020:intergenic | 40.0% | |
| TCTGAATGAGGTTTGTGCTA+AGG | + | tig0043838:2280-2299 | Msa1464020:intergenic | 40.0% | |
| ! | TAGTGCTTTTGGTCTGAATG+AGG | + | tig0043838:2292-2311 | Msa1464020:intergenic | 40.0% |
| ! | ATGGGAAGAACTAGTGCTTT+TGG | + | tig0043838:2303-2322 | Msa1464020:intergenic | 40.0% |
| ! | AGTTGTGTATTGTGGTGTTG+AGG | + | tig0043838:2343-2362 | Msa1464020:intergenic | 40.0% |
| !! | GTTAGGTTGATTGGTACAAG+TGG | + | tig0043838:2384-2403 | Msa1464020:intergenic | 40.0% |
| AACCTAACCATTGATCTTGG+TGG | - | tig0043838:2396-2415 | Msa1464020:CDS | 40.0% | |
| !!! | ATCTTGGTGGTGGCTATTTT+TGG | - | tig0043838:2409-2428 | Msa1464020:CDS | 40.0% |
| !!! | TCTTGGTGGTGGCTATTTTT+GGG | - | tig0043838:2410-2429 | Msa1464020:CDS | 40.0% |
| TGAGATGAGCTACATAGGAT+TGG | + | tig0043838:2474-2493 | Msa1464020:intergenic | 40.0% | |
| ! | AGCATTGAGATGAGCTACAT+AGG | + | tig0043838:2479-2498 | Msa1464020:intergenic | 40.0% |
| TCACCTTACAACACTGTAAC+AGG | - | tig0043838:2546-2565 | Msa1464020:CDS | 40.0% | |
| ACACCTGTTACAGTGTTGTA+AGG | + | tig0043838:2552-2571 | Msa1464020:intergenic | 40.0% | |
| ! | GGTGTACTTTTCTTTGGTGA+TGG | - | tig0043838:2819-2838 | Msa1464020:CDS | 40.0% |
| ACTGCTCCAAGTTCTTTCTT+AGG | - | tig0043838:2912-2931 | Msa1464020:CDS | 40.0% | |
| ! | TGGTTCCACCAAATCCATTT+TGG | + | tig0043838:3028-3047 | Msa1464020:intergenic | 40.0% |
| AGATCAATGGAAGGAACATC+TGG | + | tig0043838:3209-3228 | Msa1464020:intergenic | 40.0% | |
| TGCAACACTAGATCAATGGA+AGG | + | tig0043838:3218-3237 | Msa1464020:intergenic | 40.0% | |
| AGTGTTGCAGAATGAGAATG+TGG | - | tig0043838:3229-3248 | Msa1464020:CDS | 40.0% | |
| TGCAGAATGAGAATGTGGTT+TGG | - | tig0043838:3234-3253 | Msa1464020:CDS | 40.0% | |
| !! | CTACTTCAAGGCTTGGTTTT+AGG | - | tig0043838:3447-3466 | Msa1464020:CDS | 40.0% |
| !!! | TGGTTTTAGGTCACTCTTCT+TGG | - | tig0043838:3460-3479 | Msa1464020:CDS | 40.0% |
| GGAGATGATCAAAGAGAGAG+AGG | + | tig0043838:2253-2272 | Msa1446120:intergenic | 45.0% | |
| GAATGAGGTTTGTGCTAAGG+AGG | + | tig0043838:2277-2296 | Msa1446120:intergenic | 45.0% | |
| ! | GCTGAAGTGTCTCTGGTTAT+GGG | + | tig0043838:2321-2340 | Msa1446120:intergenic | 45.0% |
| CACCACCAAGATCAATGGTT+AGG | + | tig0043838:2401-2420 | Msa1464020:intergenic | 45.0% | |
| CTAACCATTGATCTTGGTGG+TGG | - | tig0043838:2399-2418 | Msa1464020:CDS | 45.0% | |
| ATAGCCACCACCAAGATCAA+TGG | + | tig0043838:2406-2425 | Msa1464020:intergenic | 45.0% | |
| !! | TGCTCACTTTTCGGTTCACA+TGG | - | tig0043838:2495-2514 | Msa1464020:CDS | 45.0% |
| TGACTGAATGTCACCAGATG+TGG | + | tig0043838:2577-2596 | Msa1464020:intergenic | 45.0% | |
| !! | TGCTAAGGGTGTCAAAGGTA+TGG | - | tig0043838:2701-2720 | Msa1464020:CDS | 45.0% |
| AACTTGGAGCAGTGCTAACA+GGG | + | tig0043838:2905-2924 | Msa1464020:intergenic | 45.0% | |
| GTTGAACCTGTAGCACCATT+TGG | - | tig0043838:3140-3159 | Msa1464020:CDS | 45.0% | |
| !! | CATGTTCCAAATGGTGCTAC+AGG | + | tig0043838:3149-3168 | Msa1464020:intergenic | 45.0% |
| !! | TGTTTGGGTTTTGTGGATGC+TGG | - | tig0043838:3308-3327 | Msa1464020:CDS | 45.0% |
| !!! | TCTCAAGTTGGTTTTGTGGC+TGG | - | tig0043838:3350-3369 | Msa1464020:CDS | 45.0% |
| GATTTGGCTACTTCAAGGCT+TGG | - | tig0043838:3440-3459 | Msa1464020:CDS | 45.0% | |
| GGAGATGATCAAAGAGAGAG+AGG | + | tig0043838:2253-2272 | Msa1464020:intergenic | 45.0% | |
| GAATGAGGTTTGTGCTAAGG+AGG | + | tig0043838:2277-2296 | Msa1464020:intergenic | 45.0% | |
| ! | GCTGAAGTGTCTCTGGTTAT+GGG | + | tig0043838:2321-2340 | Msa1464020:intergenic | 45.0% |
| CACCACCAAGATCAATGGTT+AGG | + | tig0043838:2401-2420 | Msa1464020:intergenic | 45.0% | |
| CTAACCATTGATCTTGGTGG+TGG | - | tig0043838:2399-2418 | Msa1464020:CDS | 45.0% | |
| ATAGCCACCACCAAGATCAA+TGG | + | tig0043838:2406-2425 | Msa1464020:intergenic | 45.0% | |
| !! | TGCTCACTTTTCGGTTCACA+TGG | - | tig0043838:2495-2514 | Msa1464020:CDS | 45.0% |
| TGACTGAATGTCACCAGATG+TGG | + | tig0043838:2577-2596 | Msa1464020:intergenic | 45.0% | |
| !! | TGCTAAGGGTGTCAAAGGTA+TGG | - | tig0043838:2701-2720 | Msa1464020:CDS | 45.0% |
| AACTTGGAGCAGTGCTAACA+GGG | + | tig0043838:2905-2924 | Msa1464020:intergenic | 45.0% | |
| GTTGAACCTGTAGCACCATT+TGG | - | tig0043838:3140-3159 | Msa1464020:CDS | 45.0% | |
| !! | CATGTTCCAAATGGTGCTAC+AGG | + | tig0043838:3149-3168 | Msa1464020:intergenic | 45.0% |
| !! | TGTTTGGGTTTTGTGGATGC+TGG | - | tig0043838:3308-3327 | Msa1464020:CDS | 45.0% |
| !!! | TCTCAAGTTGGTTTTGTGGC+TGG | - | tig0043838:3350-3369 | Msa1464020:CDS | 45.0% |
| GATTTGGCTACTTCAAGGCT+TGG | - | tig0043838:3440-3459 | Msa1464020:CDS | 45.0% | |
| TGAGGTTTGTGCTAAGGAGG+TGG | + | tig0043838:2274-2293 | Msa1446120:intergenic | 50.0% | |
| ! | GGCTGAAGTGTCTCTGGTTA+TGG | + | tig0043838:2322-2341 | Msa1446120:intergenic | 50.0% |
| ! | TGTTGAGGCTGAAGTGTCTC+TGG | + | tig0043838:2328-2347 | Msa1446120:intergenic | 50.0% |
| GTAACAGGTGTGTCCACATC+TGG | - | tig0043838:2561-2580 | Msa1464020:CDS | 50.0% | |
| !! | GGTCTTGCTAAGGGTGTCAA+AGG | - | tig0043838:2696-2715 | Msa1464020:CDS | 50.0% |
| !! | AAGGGTGTCAAAGGTATGGC+TGG | - | tig0043838:2705-2724 | Msa1464020:CDS | 50.0% |
| !! | GTCAAAGGTATGGCTGGTCT+TGG | - | tig0043838:2711-2730 | Msa1464020:CDS | 50.0% |
| !! | AAGGTATGGCTGGTCTTGGA+AGG | - | tig0043838:2715-2734 | Msa1464020:CDS | 50.0% |
| GAACTTGGAGCAGTGCTAAC+AGG | + | tig0043838:2906-2925 | Msa1464020:intergenic | 50.0% | |
| !! | TGGTGCTACAGGTTCAACAG+TGG | + | tig0043838:3138-3157 | Msa1464020:intergenic | 50.0% |
| !!! | CAAGTTGGTTTTGTGGCTGG+TGG | - | tig0043838:3353-3372 | Msa1464020:CDS | 50.0% |
| TGAGGTTTGTGCTAAGGAGG+TGG | + | tig0043838:2274-2293 | Msa1464020:intergenic | 50.0% | |
| ! | GGCTGAAGTGTCTCTGGTTA+TGG | + | tig0043838:2322-2341 | Msa1464020:intergenic | 50.0% |
| ! | TGTTGAGGCTGAAGTGTCTC+TGG | + | tig0043838:2328-2347 | Msa1464020:intergenic | 50.0% |
| GTAACAGGTGTGTCCACATC+TGG | - | tig0043838:2561-2580 | Msa1464020:CDS | 50.0% | |
| !! | GGTCTTGCTAAGGGTGTCAA+AGG | - | tig0043838:2696-2715 | Msa1464020:CDS | 50.0% |
| !! | AAGGGTGTCAAAGGTATGGC+TGG | - | tig0043838:2705-2724 | Msa1464020:CDS | 50.0% |
| !! | GTCAAAGGTATGGCTGGTCT+TGG | - | tig0043838:2711-2730 | Msa1464020:CDS | 50.0% |
| !! | AAGGTATGGCTGGTCTTGGA+AGG | - | tig0043838:2715-2734 | Msa1464020:CDS | 50.0% |
| GAACTTGGAGCAGTGCTAAC+AGG | + | tig0043838:2906-2925 | Msa1464020:intergenic | 50.0% | |
| !! | TGGTGCTACAGGTTCAACAG+TGG | + | tig0043838:3138-3157 | Msa1464020:intergenic | 50.0% |
| !!! | CAAGTTGGTTTTGTGGCTGG+TGG | - | tig0043838:3353-3372 | Msa1464020:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0043838 | gene | 2216 | 3526 | 2216 | ID=Msa1464020;Name=Msa1464020 |
| tig0043838 | mRNA | 2216 | 3526 | 2216 | ID=Msa1464020-mRNA-1;Parent=Msa1464020;Name=Msa1464020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|436 |
| tig0043838 | exon | 2216 | 3526 | 2216 | ID=Msa1464020-mRNA-1:exon:24287;Parent=Msa1464020-mRNA-1 |
| tig0043838 | CDS | 2216 | 3526 | 2216 | ID=Msa1464020-mRNA-1:cds;Parent=Msa1464020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
